BLASTX nr result

ID: Ephedra26_contig00026730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00026730
         (467 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001780259.1| predicted protein [Physcomitrella patens] gi...    90   4e-16
gb|ADE76467.1| unknown [Picea sitchensis]                              67   3e-09
ref|NP_615871.1| acetyltransferase (GNAT) family protein [Methan...    56   6e-06

>ref|XP_001780259.1| predicted protein [Physcomitrella patens]
           gi|162668313|gb|EDQ54923.1| predicted protein
           [Physcomitrella patens]
          Length = 236

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 39/69 (56%), Positives = 51/69 (73%)
 Frame = -1

Query: 422 LATICDVAVDPLHQNKGIGRKIVKYLAKGTRKMDGPRGFVISPPPLTRRFFWMLGFRYDK 243
           +ATICDVAVDP +Q +GIGR+IVK L +  +K  GP GF + PPP+ R+FFW++GFR D+
Sbjct: 133 MATICDVAVDPEYQKQGIGRRIVKRLVQEIKKKGGPSGFAVFPPPIARQFFWLIGFRSDR 192

Query: 242 SSNYMLYRG 216
               M YRG
Sbjct: 193 KYRLMGYRG 201


>gb|ADE76467.1| unknown [Picea sitchensis]
          Length = 69

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -1

Query: 326 MDGPRGFVISPPPLTRRFFWMLGFRYDKSSNYMLYRGSAVNKTNSNLL*CSTK 168
           MDGP GF   PPPL RRFFWM+GFRYDK   +M+Y+G  ++  +++ L   TK
Sbjct: 1   MDGPSGFAAFPPPLARRFFWMIGFRYDKKFYFMVYQGKLLDNIDASSLDSDTK 53


>ref|NP_615871.1| acetyltransferase (GNAT) family protein [Methanosarcina acetivorans
           C2A] gi|499330464|ref|WP_011020956.1| acetyltransferase
           (GNAT) family protein [Methanosarcina acetivorans]
           gi|19914738|gb|AAM04351.1| acetyltransferase (GNAT)
           family protein [Methanosarcina acetivorans C2A]
          Length = 146

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/69 (42%), Positives = 44/69 (63%)
 Frame = -1

Query: 461 IIGIGRVISDGAFLATICDVAVDPLHQNKGIGRKIVKYLAKGTRKMDGPRGFVISPPPLT 282
           I+G+GR++SDGA  A ICD+ V P HQN+GIG +I+  L K  ++ +  R ++ + P   
Sbjct: 60  IVGVGRLLSDGALYALICDIIVMPDHQNRGIGTEILTRLVKKCQESNIRRVWLFAAPE-K 118

Query: 281 RRFFWMLGF 255
            RF+   GF
Sbjct: 119 ARFYEKHGF 127


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