BLASTX nr result

ID: Ephedra26_contig00026591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00026591
         (562 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002296706.1| predicted protein [Thalassiosira pseudonana ...    63   6e-08

>ref|XP_002296706.1| predicted protein [Thalassiosira pseudonana CCMP1335]
           gi|220968561|gb|EED86907.1| predicted protein
           [Thalassiosira pseudonana CCMP1335]
          Length = 599

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 19/201 (9%)
 Frame = +2

Query: 2   AQQALKNAQRLLTKHNLKQAEVMG------------GNCKDSEALAGGMCVVELRSKKKN 145
           A+ A+K A+RL+ ++NL QA ++              N  D   L GG+    +R++KK 
Sbjct: 309 ARNAMKLARRLMERYNLDQAVLLQERGDGSLNDFSTANGDDGTFLRGGIVTANIRNRKKG 368

Query: 146 IKSVNIEEWAKILGHVIANNFDTDYY-------YVNSSPAQIVFYGIKQNAECSGFAYAA 304
               ++  W   L   +  NF  + +           +   I FYGI+ NA+ + +A+  
Sbjct: 369 TALTSLPRWNDFLVQPVCANFRVEAFKSVGRRTQCREAECSITFYGIRTNAQLAAYAFKI 428

Query: 305 TFNRITVMSARYDPMQRSLGENECKEITKSEDIFVAEDNSQENKETTKSVAVTLVARNNY 484
              RI +M+A YD                     +        K  T++V      R +Y
Sbjct: 429 ASERIALMAASYDAAHPQ----------------IKRTGVSNGKSGTRTV------RLSY 466

Query: 485 RLGIVHGLSIAVKEEKKNHQS 547
            +GIV GL   VKE  +  ++
Sbjct: 467 AMGIVIGLDRDVKEGLRKEEA 487


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