BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00026450
         (999 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX95614.1| Basic helix-loop-helix DNA-binding family protein...    71   6e-10
ref|XP_002309216.1| basic helix-loop-helix family protein [Popul...    67   1e-08
ref|XP_006357706.1| PREDICTED: putative transcription factor bHL...    63   2e-07
ref|XP_006357705.1| PREDICTED: putative transcription factor bHL...    63   2e-07
ref|XP_006475473.1| PREDICTED: putative transcription factor bHL...    61   8e-07
ref|XP_006475472.1| PREDICTED: putative transcription factor bHL...    61   8e-07
ref|XP_006475471.1| PREDICTED: putative transcription factor bHL...    61   8e-07
ref|XP_006451491.1| hypothetical protein CICLE_v10007937mg [Citr...    61   8e-07
ref|XP_006858381.1| hypothetical protein AMTR_s00064p00208400 [A...    60   1e-06
ref|XP_004173552.1| PREDICTED: LOW QUALITY PROTEIN: putative tra...    58   7e-06

>gb|EOX95614.1| Basic helix-loop-helix DNA-binding family protein [Theobroma cacao]
          Length = 497

 Score = 71.2 bits (173), Expect = 6e-10
 Identities = 78/332 (23%), Positives = 135/332 (40%), Gaps = 1/332 (0%)
 Frame = -3

Query: 997 FSLDSGVLGLAYGHPPFIWLNEEQXXXXXXXXSQKEFYMEGGIKTAVFIACRKGVIELGT 818
           FS   G+ G A      +WL              +E  M   I+T V I    GV+ELG+
Sbjct: 132 FSAGDGIPGKALSTGSLVWLTGAHELQFYNCERAREAQMHA-IETLVCIPTSCGVLELGS 190

Query: 817 MQLMQATENSISFIMSILGXXXXXXXXXXXXXXXXXXXXXXXXXXXPDITSIETLPLVPL 638
            ++++     +  + S+ G                            D+  +      P 
Sbjct: 191 SEMIRENWGLVQQVKSVFGS---------------------------DLIGLVPKQSNPN 223

Query: 637 LDLSPGPIDYELVAEPNTDQRIDL-DIGLYASVGVEQQQQQHANIVDTGNVYIHESAFSR 461
            +L+PGPI +        D+ I   DIG+ A V  E     +    +  N    + + ++
Sbjct: 224 PNLTPGPIQF-------LDRNISFADIGIIAGVQEEDASPDNRTKQENHNNQTKKDS-TK 275

Query: 460 PGESNIPMARVRVTSQLSFKRCIAMLKRIQAEQKAERQRVPSIVENNIGKPPGVMSNSQV 281
           PG+S+       V S+ S   C  +L     E++  ++R         G+ PG+   + +
Sbjct: 276 PGQSSY------VDSEHSDSDC-PLLAMNNIEKRTPKKR---------GRKPGLGRETPL 319

Query: 280 HHMIXXXXXXXXXXXXXEALRSFFPHSTRKDKASILTNTKNCLTSLKSKIEELELKNDQL 101
           +H+               ALR+  P+ +R DKAS+L++  + +  LK+KIEELE    QL
Sbjct: 320 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYINELKAKIEELE---SQL 376

Query: 100 QWELMNVRQARVCEQLLQELPNRSTTLKIDSS 5
           Q E   V+      +++  + N+STT  +D +
Sbjct: 377 QRECKKVK-----VEMVDAMDNQSTTTSVDQA 403


>ref|XP_002309216.1| basic helix-loop-helix family protein [Populus trichocarpa]
           gi|222855192|gb|EEE92739.1| basic helix-loop-helix
           family protein [Populus trichocarpa]
          Length = 395

 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 2/159 (1%)
 Frame = -3

Query: 475 SAFSRPGESNIPMARVRVT--SQLSFKRCIAMLKRIQAEQKAERQRVPSIVENNIGKPPG 302
           SAF+    +  P  + R +        R I   +R+  E++          E+ +G  P 
Sbjct: 166 SAFNNYRSALAPKTQTRASLHRHSMLTRVITYYRRLNIERR----------EHMLGGRP- 214

Query: 301 VMSNSQVHHMIXXXXXXXXXXXXXEALRSFFPHSTRKDKASILTNTKNCLTSLKSKIEEL 122
             S++Q+HHMI             +ALRS  P   +KDKASILT T+  LTSLK+++EEL
Sbjct: 215 --SSTQLHHMISERKRREKINESFKALRSILPPEAKKDKASILTRTREYLTSLKAQVEEL 272

Query: 121 ELKNDQLQWELMNVRQARVCEQLLQELPNRSTTLKIDSS 5
             KN +L+ +L     ++V +   + L  R T +   +S
Sbjct: 273 TRKNQKLEAQLSKAAVSQVRDSSYERLDVRVTHISESTS 311


>ref|XP_006357706.1| PREDICTED: putative transcription factor bHLH041-like isoform X2
           [Solanum tuberosum]
          Length = 505

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
 Frame = -3

Query: 550 ASVGVEQQQQQHANIVDTGNVYIHESAFSR--PG---ESNIPMARVRVTSQ-------LS 407
           +S     Q +++ N V T   Y   +AF R  PG    SN+ +   R   +       ++
Sbjct: 244 SSSSSSHQSRENIN-VPTDYHYQKATAFRRFRPGLGRPSNVQIGTSRTIRRENMLRRSIT 302

Query: 406 FKRCIAMLKRIQAEQKAERQRVPSIVENNIGKPPGVMSNSQVHHMIXXXXXXXXXXXXXE 227
           F R + M++R   EQ    QR P+              ++QVHHMI             +
Sbjct: 303 FFRNLNMMRR--QEQIQANQRAPT--------------STQVHHMISERRRREKLNDSFQ 346

Query: 226 ALRSFFPHSTRKDKASILTNTKNCLTSLKSKIEELELKNDQLQWEL 89
            LRS  P  T+KDKAS+L++T   LTSLK ++EEL  KN+ L+ EL
Sbjct: 347 LLRSLLPPGTKKDKASVLSSTTEYLTSLKGQVEELSKKNEMLKAEL 392


>ref|XP_006357705.1| PREDICTED: putative transcription factor bHLH041-like isoform X1
           [Solanum tuberosum]
          Length = 510

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
 Frame = -3

Query: 550 ASVGVEQQQQQHANIVDTGNVYIHESAFSR--PG---ESNIPMARVRVTSQ-------LS 407
           +S     Q +++ N V T   Y   +AF R  PG    SN+ +   R   +       ++
Sbjct: 249 SSSSSSHQSRENIN-VPTDYHYQKATAFRRFRPGLGRPSNVQIGTSRTIRRENMLRRSIT 307

Query: 406 FKRCIAMLKRIQAEQKAERQRVPSIVENNIGKPPGVMSNSQVHHMIXXXXXXXXXXXXXE 227
           F R + M++R   EQ    QR P+              ++QVHHMI             +
Sbjct: 308 FFRNLNMMRR--QEQIQANQRAPT--------------STQVHHMISERRRREKLNDSFQ 351

Query: 226 ALRSFFPHSTRKDKASILTNTKNCLTSLKSKIEELELKNDQLQWEL 89
            LRS  P  T+KDKAS+L++T   LTSLK ++EEL  KN+ L+ EL
Sbjct: 352 LLRSLLPPGTKKDKASVLSSTTEYLTSLKGQVEELSKKNEMLKAEL 397


>ref|XP_006475473.1| PREDICTED: putative transcription factor bHLH041-like isoform X3
           [Citrus sinensis]
          Length = 548

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
 Frame = -3

Query: 535 EQQQQQHANIVDTGNVYIHESAFSRPGESNIPMARVRVTS----QLSFKRCIAMLKRIQA 368
           +QQQQQ              SAF        P + +R  S    Q   KR I+  +R+  
Sbjct: 293 QQQQQQQQEQPQQHLAPPKASAFKNYNLVLAPTSNIRAISAFRGQSILKRTISYYRRL-- 350

Query: 367 EQKAERQRVPSIVENNIGKPPGVMSNSQVHHMIXXXXXXXXXXXXXEALRSFFPHSTRKD 188
                     +I        P   +++Q+HHMI              ALRS  P  T+KD
Sbjct: 351 ----------NIARREYTAGPSRPTSTQLHHMISERKRREKLNESFHALRSLLPPGTKKD 400

Query: 187 KASILTNTKNCLTSLKSKIEELELKNDQLQWELM 86
           KAS+L NT+  L+SLK++++EL  +N  L+ +++
Sbjct: 401 KASLLINTREYLSSLKAQVDELSRRNQILEAQVL 434


>ref|XP_006475472.1| PREDICTED: putative transcription factor bHLH041-like isoform X2
           [Citrus sinensis]
          Length = 553

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
 Frame = -3

Query: 535 EQQQQQHANIVDTGNVYIHESAFSRPGESNIPMARVRVTS----QLSFKRCIAMLKRIQA 368
           +QQQQQ              SAF        P + +R  S    Q   KR I+  +R+  
Sbjct: 298 QQQQQQQQEQPQQHLAPPKASAFKNYNLVLAPTSNIRAISAFRGQSILKRTISYYRRL-- 355

Query: 367 EQKAERQRVPSIVENNIGKPPGVMSNSQVHHMIXXXXXXXXXXXXXEALRSFFPHSTRKD 188
                     +I        P   +++Q+HHMI              ALRS  P  T+KD
Sbjct: 356 ----------NIARREYTAGPSRPTSTQLHHMISERKRREKLNESFHALRSLLPPGTKKD 405

Query: 187 KASILTNTKNCLTSLKSKIEELELKNDQLQWELM 86
           KAS+L NT+  L+SLK++++EL  +N  L+ +++
Sbjct: 406 KASLLINTREYLSSLKAQVDELSRRNQILEAQVL 439


>ref|XP_006475471.1| PREDICTED: putative transcription factor bHLH041-like isoform X1
           [Citrus sinensis]
          Length = 554

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
 Frame = -3

Query: 535 EQQQQQHANIVDTGNVYIHESAFSRPGESNIPMARVRVTS----QLSFKRCIAMLKRIQA 368
           +QQQQQ              SAF        P + +R  S    Q   KR I+  +R+  
Sbjct: 299 QQQQQQQQEQPQQHLAPPKASAFKNYNLVLAPTSNIRAISAFRGQSILKRTISYYRRL-- 356

Query: 367 EQKAERQRVPSIVENNIGKPPGVMSNSQVHHMIXXXXXXXXXXXXXEALRSFFPHSTRKD 188
                     +I        P   +++Q+HHMI              ALRS  P  T+KD
Sbjct: 357 ----------NIARREYTAGPSRPTSTQLHHMISERKRREKLNESFHALRSLLPPGTKKD 406

Query: 187 KASILTNTKNCLTSLKSKIEELELKNDQLQWELM 86
           KAS+L NT+  L+SLK++++EL  +N  L+ +++
Sbjct: 407 KASLLINTREYLSSLKAQVDELSRRNQILEAQVL 440


>ref|XP_006451491.1| hypothetical protein CICLE_v10007937mg [Citrus clementina]
           gi|557554717|gb|ESR64731.1| hypothetical protein
           CICLE_v10007937mg [Citrus clementina]
          Length = 542

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
 Frame = -3

Query: 535 EQQQQQHANIVDTGNVYIHESAFSRPGESNIPMARVRVTS----QLSFKRCIAMLKRIQA 368
           +QQQQQ              SAF        P + +R  S    Q   KR I+  +R+  
Sbjct: 287 QQQQQQQQEQPQQHLAPPKASAFKNYNLVLAPTSNIRAISAFRGQSILKRTISYYRRL-- 344

Query: 367 EQKAERQRVPSIVENNIGKPPGVMSNSQVHHMIXXXXXXXXXXXXXEALRSFFPHSTRKD 188
                     +I        P   +++Q+HHMI              ALRS  P  T+KD
Sbjct: 345 ----------NIARREYTAGPSRPTSTQLHHMISERKRREKLNESFHALRSLLPPGTKKD 394

Query: 187 KASILTNTKNCLTSLKSKIEELELKNDQLQWELM 86
           KAS+L NT+  L+SLK++++EL  +N  L+ +++
Sbjct: 395 KASLLINTREYLSSLKAQVDELSRRNQILEAQVL 428


>ref|XP_006858381.1| hypothetical protein AMTR_s00064p00208400 [Amborella trichopoda]
           gi|548862488|gb|ERN19848.1| hypothetical protein
           AMTR_s00064p00208400 [Amborella trichopoda]
          Length = 488

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 47/129 (36%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
 Frame = -3

Query: 472 AFSRPGESNIPMARVRV-TSQLSFKRCIAMLKRIQAEQKAERQRVPSIVENNIGKPPGVM 296
           AF R   S    A  RV  SQ  FKR IA+L+RI    +  RQRV    E          
Sbjct: 258 AFQRYNSSGGVKAERRVGVSQRLFKRSIAVLRRI----REVRQRV----EEGAAAGTRPA 309

Query: 295 SNSQVHHMIXXXXXXXXXXXXXEALRSFFPHSTRKDKASILTNTKNCLTSLKSKIEELEL 116
           S++Q+HH+I             +ALR+  P  ++KDKASIL+ T+  L  LK +++EL  
Sbjct: 310 SSTQLHHVISERRRREKLNELFQALRAMLPLDSKKDKASILSRTREYLGELKVQVKELNE 369

Query: 115 KNDQLQWEL 89
           +N  L+  L
Sbjct: 370 RNISLETRL 378


>ref|XP_004173552.1| PREDICTED: LOW QUALITY PROTEIN: putative transcription factor
           bHLH041-like, partial [Cucumis sativus]
          Length = 461

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 35/112 (31%), Positives = 58/112 (51%)
 Frame = -3

Query: 421 TSQLSFKRCIAMLKRIQAEQKAERQRVPSIVENNIGKPPGVMSNSQVHHMIXXXXXXXXX 242
           T Q   KR +A +  +   +  ER    S       +P    ++SQ+HH+I         
Sbjct: 266 TRQSLLKRSLAFMTNLNLMRVRERMPTTS-------RP----TSSQLHHVISERRRREKL 314

Query: 241 XXXXEALRSFFPHSTRKDKASILTNTKNCLTSLKSKIEELELKNDQLQWELM 86
               +AL+S  P  T+KDK S+LT T+  ++SLK+++ EL  +N QL+ +L+
Sbjct: 315 NDSFQALKSLLPPGTKKDKGSVLTTTREYMSSLKAQVAELSRRNQQLEAQLL 366