BLASTX nr result

ID: Ephedra26_contig00026179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00026179
         (498 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17322.3| unnamed protein product [Vitis vinifera]               62   1e-07
ref|XP_002266835.1| PREDICTED: transcription factor FAMA [Vitis ...    59   5e-07
emb|CAN60177.1| hypothetical protein VITISV_027832 [Vitis vinifera]    59   5e-07
ref|XP_002300174.2| hypothetical protein POPTR_0001s32160g [Popu...    56   6e-06
ref|XP_006365482.1| PREDICTED: transcription factor FAMA-like [S...    55   1e-05
ref|XP_002883481.1| hypothetical protein ARALYDRAFT_898955 [Arab...    55   1e-05

>emb|CBI17322.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 43/111 (38%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
 Frame = -2

Query: 323 MDRDE--SCTMPSMYPPCSGDYSLDQLQIHRQ-SRSNNTDSIDDMNSSPMGNTIID-MFS 156
           MD++E  S  +P+ +     DY+L+Q Q   Q  +    +S DD N       ++D M S
Sbjct: 1   MDKEENYSAALPASFTGL--DYTLNQQQQQEQLMKPRIGESSDDNNHG-----VVDYMLS 53

Query: 155 MQQQHQLVSSGSSHALLDKTNFTDVMSFADYGPKLALQIDDSNENREGFDP 3
             Q  QL SSG   +  DK +F DVM FAD+GPKLAL     +E   G DP
Sbjct: 54  NPQHQQLTSSGFCSSSFDKLSFADVMQFADFGPKLALNQTKVSEEETGIDP 104


>ref|XP_002266835.1| PREDICTED: transcription factor FAMA [Vitis vinifera]
          Length = 400

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 38/91 (41%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
 Frame = -2

Query: 269 DYSLDQLQIHRQ-SRSNNTDSIDDMNSSPMGNTIID-MFSMQQQHQLVSSGSSHALLDKT 96
           DY+L+Q Q   Q  +    +S DD N       ++D M S  Q  QL SSG   +  DK 
Sbjct: 22  DYTLNQQQQQEQLMKPRIGESSDDNNHG-----VVDYMLSNPQHQQLTSSGFCSSSFDKL 76

Query: 95  NFTDVMSFADYGPKLALQIDDSNENREGFDP 3
           +F DVM FAD+GPKLAL     +E   G DP
Sbjct: 77  SFADVMQFADFGPKLALNQTKVSEEETGIDP 107


>emb|CAN60177.1| hypothetical protein VITISV_027832 [Vitis vinifera]
          Length = 422

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 38/91 (41%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
 Frame = -2

Query: 269 DYSLDQLQIHRQ-SRSNNTDSIDDMNSSPMGNTIID-MFSMQQQHQLVSSGSSHALLDKT 96
           DY+L+Q Q   Q  +    +S DD N       ++D M S  Q  QL SSG   +  DK 
Sbjct: 22  DYTLNQQQQQEQLMKPRIGESSDDNNHG-----VVDYMLSNPQHQQLTSSGFCSSSFDKL 76

Query: 95  NFTDVMSFADYGPKLALQIDDSNENREGFDP 3
           +F DVM FAD+GPKLAL     +E   G DP
Sbjct: 77  SFADVMQFADFGPKLALNQTKVSEEETGIDP 107


>ref|XP_002300174.2| hypothetical protein POPTR_0001s32160g [Populus trichocarpa]
           gi|550348686|gb|EEE84979.2| hypothetical protein
           POPTR_0001s32160g [Populus trichocarpa]
          Length = 409

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 43/98 (43%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
 Frame = -2

Query: 269 DYSLD---QLQIH---RQSRSNNTDSIDDMNSSPMGNTIID-MFSMQQQHQL-VSSG-SS 117
           DYSLD   Q Q H    + R   T   DD N     N +ID M +  QQHQ  +SSG  +
Sbjct: 15  DYSLDHHHQQQDHLGLMKQRIGGTSGDDDCN-----NGMIDYMLNNPQQHQQQMSSGFCT 69

Query: 116 HALLDKTNFTDVMSFADYGPKLALQIDDSNENREGFDP 3
               DK +F DVM FAD+GPKLAL  +  +E   G DP
Sbjct: 70  STSFDKLSFADVMQFADFGPKLALNQNKISEEETGIDP 107


>ref|XP_006365482.1| PREDICTED: transcription factor FAMA-like [Solanum tuberosum]
          Length = 390

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
 Frame = -2

Query: 323 MDRDESCTMPSMYPPCSGDYSLDQLQIHRQSRSNNTDSIDDMNSSPMGNTIIDMFSMQQQ 144
           M+++E+C   S+  P S      Q+ I  +S SNNT++        M + +++  S+QQQ
Sbjct: 1   MEKEENCQANSL--PTSF-----QMAIIGESSSNNTNN-------QMVDYMVNSQSIQQQ 46

Query: 143 HQLVSSG--SSHALLDKTNFTDVMSFADYGPKLALQIDDSNENREGFD 6
           H   S G   S+  LDK +F DVM FAD+GPKLAL      E   G D
Sbjct: 47  HNQCSLGFLPSNPSLDKLSFADVMQFADFGPKLALNQTKVLEQDVGID 94


>ref|XP_002883481.1| hypothetical protein ARALYDRAFT_898955 [Arabidopsis lyrata subsp.
           lyrata] gi|297329321|gb|EFH59740.1| hypothetical protein
           ARALYDRAFT_898955 [Arabidopsis lyrata subsp. lyrata]
          Length = 400

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
 Frame = -2

Query: 224 NNTDSIDDMNSSPMGNTIIDMFSMQQQHQLVSSGSSHALLDKTNFTDVMSFADYGPKLAL 45
           N++  ID M +  + +        QQ HQL  SG      DK NF+DVM FAD+GPKLAL
Sbjct: 21  NSSGMIDYMFNRNLQHQQKQSMPQQQHHQLSPSGFGATPFDKMNFSDVMQFADFGPKLAL 80

Query: 44  -QIDDSNENREGFDP 3
            Q  + ++   G DP
Sbjct: 81  NQTRNQDDQETGIDP 95


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