BLASTX nr result

ID: Ephedra26_contig00026087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00026087
         (457 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511885.1| hypothetical protein RCOM_1616010 [Ricinus c...    57   3e-06
ref|XP_006827540.1| hypothetical protein AMTR_s00009p00212200 [A...    57   3e-06
ref|XP_004240098.1| PREDICTED: AT-rich interactive domain-contai...    57   3e-06

>ref|XP_002511885.1| hypothetical protein RCOM_1616010 [Ricinus communis]
           gi|223549065|gb|EEF50554.1| hypothetical protein
           RCOM_1616010 [Ricinus communis]
          Length = 368

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/69 (43%), Positives = 43/69 (62%)
 Frame = +3

Query: 3   GGFDLVSASRMWSSVAMGLGFGQENGPTVKLVYSKYLKLFDKWVEKTGILGSNGSCLVTP 182
           GG+D VS + +W  VA   GFG ++G +VKLVY+KYL   +KW+EK   +G   S     
Sbjct: 80  GGYDAVSQNELWDVVADESGFGVKSGSSVKLVYAKYLDALEKWLEKA--VGDKNS----K 133

Query: 183 EKSTNGLNS 209
            KS+NG ++
Sbjct: 134 TKSSNGASN 142


>ref|XP_006827540.1| hypothetical protein AMTR_s00009p00212200 [Amborella trichopoda]
           gi|548832160|gb|ERM94956.1| hypothetical protein
           AMTR_s00009p00212200 [Amborella trichopoda]
          Length = 378

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 49/175 (28%), Positives = 68/175 (38%), Gaps = 25/175 (14%)
 Frame = +3

Query: 3   GGFDLVSASRMWSSVAMGLGFGQENGPTVKLVYSKYLKLFDKWVEKTGI----------- 149
           GG+D VS S  WSSVA  L F    G  +KLVY+KYL   D+W+E  G+           
Sbjct: 63  GGYDSVSKSCAWSSVADELCFESSCGAPIKLVYAKYLSFMDRWMEAHGLDFKNCLEALVH 122

Query: 150 --------------LGSNGSCLVTPEKSTNGLNSRFLQTRDSNGVSHFSSRANLFVGTGQ 287
                         L  NG  L TP K +   + +     D NG  H +       G   
Sbjct: 123 GNMHKKNGMHASCELDCNGKELRTPSKQSAYASPKL----DCNGPKHEAPSKQR--GENL 176

Query: 288 SASPILIPDDEEQISSSPIKVFETDDIVTNTKSRKRKNVAFLHTLEWIKRAAKRP 452
           + S I +  ++E++               N  S   K    +  L+W+K  AK P
Sbjct: 177 NISVIYVDSEDEKVDG-------------NICSPTWKREPLILMLKWLKGVAKYP 218


>ref|XP_004240098.1| PREDICTED: AT-rich interactive domain-containing protein 1-like
           [Solanum lycopersicum]
          Length = 617

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 53/206 (25%), Positives = 84/206 (40%), Gaps = 55/206 (26%)
 Frame = +3

Query: 3   GGFDLVSASRMWSSVAMGLGFGQENGPTVKLVYSKYLKLFDKWV---EKTGI-------- 149
           GG+  VS + +W  V M  GF    G  +KLVY KYL + +KWV    +T +        
Sbjct: 82  GGYQRVSENGLWGLVGMDCGFDSSYGMALKLVYVKYLGVLEKWVLRVRETDVSSVKSKVS 141

Query: 150 ---LGSNGSCL--------------VTPEKSTNGLNSRFLQTRDSNGVSHFS----SRAN 266
              LGS+G  +              ++ EK+ +G N   + T D +    F     S   
Sbjct: 142 KCDLGSDGDGVPMDVELDLKKVLMKISDEKAKDGDNGNGVDTTDGDEARDFDGLNGSNEK 201

Query: 267 LFVGTGQSASPILIPD---------DEEQISS-------SPIKVFETDDIVT-------N 377
               +    + I + D         D+E + S       S +    TD+ +T       +
Sbjct: 202 FDGQSNLDNNVITVKDIDETRSVVYDKEHLKSVKGRESVSVLHGNGTDESLTKYTMVEED 261

Query: 378 TKSRKRKNVAFLHTLEWIKRAAKRPC 455
             SRKRK  ++L  ++W+   AK+PC
Sbjct: 262 CVSRKRKRESYLDMVKWVSEVAKKPC 287


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