BLASTX nr result

ID: Ephedra26_contig00026048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00026048
         (499 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006385578.1| hypothetical protein POPTR_0003s08270g [Popu...    57   2e-06
ref|XP_002329596.1| predicted protein [Populus trichocarpa]            57   2e-06

>ref|XP_006385578.1| hypothetical protein POPTR_0003s08270g [Populus trichocarpa]
           gi|550342705|gb|ERP63375.1| hypothetical protein
           POPTR_0003s08270g [Populus trichocarpa]
          Length = 701

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 16/156 (10%)
 Frame = -1

Query: 496 QFYSSLLRIYCDLDELDFASELVLELLKKQISKDCWKVEKEKHR---------NRKWSRR 344
           QFY SLL+++   D++D A++L+L++ K Q S    K+  ++ +         N K   +
Sbjct: 303 QFYDSLLKLHFKFDDIDSAAQLLLDMHKFQESVPNKKLRMDQEKRLLVPIGSNNLKTGLK 362

Query: 343 VEKEPA-----HVLPIKADKHLIRWRKWMFRPTDEVYAMISSRYLCTGRPEDLIRFLLI- 182
           ++  P       +L +K  + L+ +R      ++   A + + Y   GR  DL + LL  
Sbjct: 363 IQVMPELLQKDSILTVKHKQELVMFRSGKLLLSNRALAKLVNGYRRHGRTTDLSKLLLCM 422

Query: 181 -ADRLRGSQSALCRQVLQACIEEGWVDHAYLMIREL 77
             D     QS+ C  V+ ACI  GW++ A+ ++ ++
Sbjct: 423 QQDFHVLGQSSFCSDVIDACIRLGWLEMAHDILDDM 458


>ref|XP_002329596.1| predicted protein [Populus trichocarpa]
          Length = 701

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 16/156 (10%)
 Frame = -1

Query: 496 QFYSSLLRIYCDLDELDFASELVLELLKKQISKDCWKVEKEKHR---------NRKWSRR 344
           QFY SLL+++   D++D A++L+L++ K Q S    K+  ++ +         N K   +
Sbjct: 303 QFYDSLLKLHFKFDDIDSAAQLLLDMHKFQESVPNKKLRMDQEKRLLVPIGSNNLKTGLK 362

Query: 343 VEKEPA-----HVLPIKADKHLIRWRKWMFRPTDEVYAMISSRYLCTGRPEDLIRFLLI- 182
           ++  P       +L +K  + L+ +R      ++   A + + Y   GR  DL + LL  
Sbjct: 363 IQVMPELLQKDSILTVKHKQELVMFRSGKLLLSNRALAKLVNGYRRHGRTTDLSKLLLCM 422

Query: 181 -ADRLRGSQSALCRQVLQACIEEGWVDHAYLMIREL 77
             D     QS+ C  V+ ACI  GW++ A+ ++ ++
Sbjct: 423 QQDFHVLGQSSFCSDVIDACIRLGWLEMAHDILDDM 458


Top