BLASTX nr result

ID: Ephedra26_contig00025895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00025895
         (487 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17288.1| unknown [Picea sitchensis]                              76   4e-12
ref|NP_565361.1| uncharacterized protein [Arabidopsis thaliana] ...    62   1e-07

>gb|ABR17288.1| unknown [Picea sitchensis]
          Length = 272

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
 Frame = +3

Query: 123 NGDQDHGFFSFFPRWFKWLVGSVMTFWGAHRMQ-FLXXXXXXXXXXXXXXXXXXXXXXXX 299
           +G ++H F  F P W + L GS+ T WG +     L                        
Sbjct: 113 HGHENHTF-GFIPGWLRSLFGSIRTLWGGYNFSDLLKIEGDVEKVVEIVEEVAETAEKVA 171

Query: 300 DVVEDIAKVISQDFPEGTPINQAAHVVEHVSDIIAHEAHDTKLIADKIEATEKIMETSIK 479
            + EDI++ I+++FP+   +N+AAH VEH+S+ +  +AH T+    K+ +TEKI+ETSI+
Sbjct: 172 TMTEDISEAIAEEFPQEGAVNKAAHFVEHLSEEVMEKAHKTEEFIHKVTSTEKIVETSIE 231

Query: 480 DA 485
           +A
Sbjct: 232 NA 233


>ref|NP_565361.1| uncharacterized protein [Arabidopsis thaliana]
           gi|20198188|gb|AAM15449.1| Expressed protein
           [Arabidopsis thaliana] gi|330251185|gb|AEC06279.1|
           uncharacterized protein AT2G14095 [Arabidopsis thaliana]
          Length = 234

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
 Frame = +3

Query: 78  NISNQSKPQPEPDSPNGDQDHGFFSFFPRWFKWLVGS----VMTFWGAHRMQFLXXXXXX 245
           N+SN SK QP P  PN      +F+F P W +W++GS    V++FW   R+Q L      
Sbjct: 72  NVSNDSKMQPSP--PNQ-----WFNF-PSWGRWVIGSAISLVLSFWNNERLQKLKRIEGE 123

Query: 246 XXXXXXXXXXXXXXXXXXDVVED-IAKVISQDFPEGTPINQAAHVVEHVSDIIAHEAHDT 422
                                 D +A+ +++  PE   + Q A V+EH+S++ AHEAH T
Sbjct: 124 AELVVEGVEAVAEMVEKVATATDEMAEEMAEKLPEKNKLKQVALVLEHISEVAAHEAHLT 183

Query: 423 KLIADKIE 446
           +    K+E
Sbjct: 184 QDFLHKVE 191


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