BLASTX nr result

ID: Ephedra26_contig00025841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00025841
         (500 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76511.1| unknown [Picea sitchensis]                              66   6e-09
gb|ADE77070.1| unknown [Picea sitchensis]                              65   1e-08
gb|ABR16839.1| unknown [Picea sitchensis]                              56   4e-08
gb|ABR18197.1| unknown [Picea sitchensis]                              59   7e-07
ref|XP_004487870.1| PREDICTED: uncharacterized protein LOC101495...    58   2e-06
gb|ADE76674.1| unknown [Picea sitchensis]                              53   2e-06
ref|XP_002887773.1| mitochondrial transcription termination fact...    57   3e-06
gb|ADE75685.1| unknown [Picea sitchensis]                              56   6e-06

>gb|ADE76511.1| unknown [Picea sitchensis]
          Length = 250

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 38/113 (33%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
 Frame = +1

Query: 1   VLCSSAEATIARIQYMQRFGARDSKTYTTIMARS-LTISLDSLDQKVKMLGTLGLSDEEV 177
           ++  S E  +   + ++  G +       I  RS L +  ++L +K + L +LG S++++
Sbjct: 51  LIVMSEEKVMESFKQVEDIGLKKGSKLFAIGLRSILAMGTENLGRKQQFLSSLGFSEKQI 110

Query: 178 KALVRKRPDLLLYSSQKVNKTADFLVQ-IGVPLKELVKYYDIFALNLEKRIKP 333
             L+RKR  +L  S +K+ +  DFLV+  G+PL +LVKY  +FA +LEKR+ P
Sbjct: 111 SELLRKRTLILELSEEKIKRNLDFLVKTAGLPLTDLVKYPGLFAYSLEKRMIP 163


>gb|ADE77070.1| unknown [Picea sitchensis]
          Length = 359

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 36/113 (31%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
 Frame = +1

Query: 1   VLCSSAEATIARIQYMQRFG-ARDSKTYTTIMARSLTISLDSLDQKVKMLGTLGLSDEEV 177
           +L +S E      + ++  G  + SK +   +     +  + LD+K++ L +LG S ++V
Sbjct: 188 LLTASEEKVTESFKQVEDLGFKKGSKMFRIALGAYFGLGKEKLDRKLQCLSSLGFSKQQV 247

Query: 178 KALVRKRPDLLLYSSQKVNKTADFLVQ-IGVPLKELVKYYDIFALNLEKRIKP 333
             L  +RP +L  S +K+ +  DFLV+ +G+PL ++ KY D+FA +LE R+ P
Sbjct: 248 LYLASQRPLILTLSEEKLKRNVDFLVKTVGLPLADIAKYPDLFANSLETRMIP 300


>gb|ABR16839.1| unknown [Picea sitchensis]
          Length = 174

 Score = 56.2 bits (134), Expect(2) = 4e-08
 Identities = 28/91 (30%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
 Frame = +1

Query: 64  RDSKTYTTIMARSLTISLDSLDQKVKMLGTLGLSDEEVKALVRKRPDLLLYSSQKVNKTA 243
           + SK +   +   L +  + LD++ + L +LG S+ ++  + RK+P  L  + +K+ +  
Sbjct: 14  KGSKMFALAVRPILGLGQEKLDRRRQCLRSLGFSENQILDIWRKKPSSLGITEEKIKRNV 73

Query: 244 DFLVQ-IGVPLKELVKYYDIFALNLEKRIKP 333
           DF+V+  G+PL +LVKY ++F  ++E R+ P
Sbjct: 74  DFVVKTAGIPLADLVKYPNLFEYSVETRMIP 104



 Score = 26.9 bits (58), Expect(2) = 4e-08
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 378 KKDPSMIAFFKMPE*RLLNRYVNNHPQKLKLLV 476
           K+  S +  F MPE R L +YVN++ +   L++
Sbjct: 128 KEGLSFVQIFIMPENRFLEQYVNSNAESSALIL 160


>gb|ABR18197.1| unknown [Picea sitchensis]
          Length = 401

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/113 (28%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
 Frame = +1

Query: 1   VLCSSAEATIARIQYMQRFGA-RDSKTYTTIMARSLTISLDSLDQKVKMLGTLGLSDEEV 177
           + C+S E  +   +  +  G  + SK +   M   L +  +++D++++ L +LG S++++
Sbjct: 220 LFCASEEKIMESFKQAEDLGVTKGSKAFAAAMRAVLGVGKETIDRRLQCLRSLGFSEKQI 279

Query: 178 KALVRKRPDLLLYSSQKVNKTADFLV-QIGVPLKELVKYYDIFALNLEKRIKP 333
             +  KRP +L  S   +    DF+V  +G+PL +LVK+  +F  ++EKR+ P
Sbjct: 280 LEISSKRPLVLGSSEVNLKHHVDFVVNSLGLPLADLVKHVTLFTYSVEKRMIP 332


>ref|XP_004487870.1| PREDICTED: uncharacterized protein LOC101495049 [Cicer arietinum]
          Length = 417

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
 Frame = +1

Query: 13  SAEATIARIQYMQRFGARDSKT-YTTIMARSLTISLDSLDQKVKMLGTLGLSDEEVKALV 189
           S+   +  I+ ++  G    K+ ++  +   LT+     D KV +    G SDE V    
Sbjct: 236 SSNNLLREIEELKELGFNPLKSAFSIALLAKLTVRKSHWDDKVNVFKKWGWSDENVVEAF 295

Query: 190 RKRPDLLLYSSQKVNKTADFLV-QIGVPLKELVKYYDIFALNLEKRIKP 333
           R++P+ +L S  K+N   +F V ++G+   ELVK  +IF L+LEKR+ P
Sbjct: 296 RRQPNCMLASCDKINNVMEFWVNELGMDAMELVKGTNIFGLSLEKRVIP 344


>gb|ADE76674.1| unknown [Picea sitchensis]
          Length = 335

 Score = 53.1 bits (126), Expect(2) = 2e-06
 Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
 Frame = +1

Query: 118 DSLDQKVKMLGTLGLSDEEVKALVRKRPDLLLYSSQKVNKTADFLVQ-IGVPLKELVKYY 294
           + L  K+K L + G+ + E+K LVR+ P +L  S  K+ K  DF++   G+P K L+   
Sbjct: 203 ERLRNKLKYLASFGIPENEIKDLVRRNPVILNVSMDKMQKNMDFIIHTAGLPAKFLLSCP 262

Query: 295 DIFALNLEKRIKPGH 339
            + A +LE RIKP H
Sbjct: 263 LLPAFSLESRIKPRH 277



 Score = 24.3 bits (51), Expect(2) = 2e-06
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 387 PSMIAFFKMPE*RLLNRYVNNHPQKLKLLVI 479
           PS+     + E + L +YVN  P   KLL I
Sbjct: 293 PSLTYVLSLSERKFLEKYVNCSPYATKLLEI 323


>ref|XP_002887773.1| mitochondrial transcription termination factor family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297333614|gb|EFH64032.1| mitochondrial transcription
           termination factor family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 405

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
 Frame = +1

Query: 34  RIQYMQRFGA-RDSKTYTTIMARSLTISLDSLDQKVKMLGTLGLSDEEVKALVRKRPDLL 210
           + +Y+Q+ G  R+SK +  + A      ++++++KV+ L   G S+EE+  L  K P LL
Sbjct: 228 KFEYIQKTGVTRESKMFKYVAAIIGVSRMETIEEKVRNLEKFGFSEEEIWHLCGKCPILL 287

Query: 211 LYSSQKVNKTADFLV-QIGVPLKELVKYYDIFALNLEKRIKPGHD 342
             S +KV +   F++  + +P   +VK+  +  LNLE R+KP  D
Sbjct: 288 SLSVEKVQRNMTFVIASMKLPAHSVVKHPCLLLLNLESRLKPRAD 332


>gb|ADE75685.1| unknown [Picea sitchensis]
          Length = 355

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
 Frame = +1

Query: 1   VLCSSAEATIARIQYMQRFGA-RDSKTYTTIMARSLTISLDSLDQKVKMLGTLGLSDEEV 177
           +L  S E  +   +  +  G  + SK +  +M   L    + L+++++ L +   S+++V
Sbjct: 188 LLMVSEETVLESFKQAEDLGCQKGSKMFACVMRGILGTGKEQLERRLQCLSSC-FSEKQV 246

Query: 178 KALVRKRPDLLLYSSQKVNKTADFLVQ-IGVPLKELVKYYDIFALNLEKRIKP 333
             L+R+ P +L YS + V    DFLV+ +G PL  LVKY  +F  +LEKRI P
Sbjct: 247 LELLRRWPLILGYSEENVKHRVDFLVKSLGFPLDYLVKYPALFGYSLEKRIIP 299


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