BLASTX nr result
ID: Ephedra26_contig00025828
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00025828
(749 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus pe... 86 1e-14
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 84 7e-14
ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 84 7e-14
ref|XP_002332393.1| predicted protein [Populus trichocarpa] 83 1e-13
gb|EXB77631.1| DNA-directed RNA polymerase 2 [Morus notabilis] 82 2e-13
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 82 2e-13
gb|ABD96891.1| hypothetical protein [Cleome spinosa] 82 2e-13
ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Popu... 81 4e-13
ref|XP_002331994.1| predicted protein [Populus trichocarpa] gi|5... 80 6e-13
ref|XP_006857036.1| hypothetical protein AMTR_s00065p00022170 [A... 80 7e-13
emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera] 80 7e-13
gb|EOY31498.1| DNA/RNA polymerases superfamily protein isoform 3... 80 9e-13
gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2... 80 9e-13
gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1... 80 9e-13
ref|XP_004491959.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 80 9e-13
ref|XP_004491958.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 80 9e-13
ref|XP_004491957.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 80 9e-13
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 79 1e-12
dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa... 79 1e-12
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g... 79 1e-12
>gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
Length = 1024
Score = 85.9 bits (211), Expect = 1e-14
Identities = 46/115 (40%), Positives = 64/115 (55%)
Frame = +1
Query: 403 NVFRASVSTALEPLVSSEDEVKDFFTHKSATVTESLRLEEQIKQXXXXXXXXXXXXXXXX 582
+V A ST +E VS DEV++ S + +++ +Q
Sbjct: 132 SVAEAVSSTDVEEEVSVVDEVQELLQQMSIEEKREAQYKQRTRQNRARGMGQGKYHMLKR 191
Query: 583 XXXXQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAID 747
Q++ ETEAW +A +EY+EL +MC +APNLPY+KSLFLGWF+PLRNAID
Sbjct: 192 R---QIKIETEAWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNAID 243
>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Cucumis sativus]
Length = 975
Score = 83.6 bits (205), Expect = 7e-14
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = +1
Query: 595 QVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAID 747
Q++ ETEAW K EEYKEL EMC +APNLPYVK LFLGWF+PL+NAI+
Sbjct: 147 QIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKKLFLGWFEPLKNAIE 197
>ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Cucumis sativus]
Length = 975
Score = 83.6 bits (205), Expect = 7e-14
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = +1
Query: 595 QVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAID 747
Q++ ETEAW K EEYKEL EMC +APNLPYVK LFLGWF+PL+NAI+
Sbjct: 147 QIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKKLFLGWFEPLKNAIE 197
>ref|XP_002332393.1| predicted protein [Populus trichocarpa]
Length = 173
Score = 82.8 bits (203), Expect = 1e-13
Identities = 46/112 (41%), Positives = 61/112 (54%)
Frame = +1
Query: 412 RASVSTALEPLVSSEDEVKDFFTHKSATVTESLRLEEQIKQXXXXXXXXXXXXXXXXXXX 591
RA ST +E VS DEV++ E + EE ++
Sbjct: 54 RALSSTDVEDNVSGADEVQEL-------QPEMRKEEEHFRRRRLRANPGIGSRKHRVLRR 106
Query: 592 XQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAID 747
QV+ E EAW AT+EYKEL ++MC N+APNLPY+KSLFLGWF+P +AI+
Sbjct: 107 RQVKIEAEAWELATKEYKELLKDMCEHNLAPNLPYMKSLFLGWFEPFTDAIE 158
>gb|EXB77631.1| DNA-directed RNA polymerase 2 [Morus notabilis]
Length = 935
Score = 81.6 bits (200), Expect = 2e-13
Identities = 34/50 (68%), Positives = 42/50 (84%)
Frame = +1
Query: 595 QVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 744
QV+ ETEAW KA+ EYK++ +EMC +APNLPY+KSLFLGWF+PLR AI
Sbjct: 111 QVKLETEAWEKASNEYKQMVDEMCKKKLAPNLPYMKSLFLGWFEPLREAI 160
>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
vinifera]
Length = 979
Score = 81.6 bits (200), Expect = 2e-13
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = +1
Query: 595 QVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAID 747
QV+ ETEAW + EEY+E+ EMC +APNLPYVK+LFLGWF+PLR AID
Sbjct: 150 QVKAETEAWERMVEEYREIEREMCEKKLAPNLPYVKALFLGWFEPLREAID 200
>gb|ABD96891.1| hypothetical protein [Cleome spinosa]
Length = 1021
Score = 81.6 bits (200), Expect = 2e-13
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +1
Query: 595 QVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 744
QV+ ETEAW KA EYKEL +MC +APNLPYVKSLFLGWF+PLR AI
Sbjct: 196 QVKIETEAWEKAANEYKELLTDMCEQKLAPNLPYVKSLFLGWFEPLREAI 245
>ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa]
gi|550332836|gb|EEE88785.2| hypothetical protein
POPTR_0008s11200g [Populus trichocarpa]
Length = 988
Score = 80.9 bits (198), Expect = 4e-13
Identities = 33/50 (66%), Positives = 43/50 (86%)
Frame = +1
Query: 595 QVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 744
Q++ ETEAW +A +EY+E+ E+MC +APNLPYVKSLFLGWF+PLR+AI
Sbjct: 149 QIKMETEAWEQAAQEYQEMLEDMCEQKLAPNLPYVKSLFLGWFEPLRDAI 198
>ref|XP_002331994.1| predicted protein [Populus trichocarpa]
gi|566259328|ref|XP_006389224.1| hypothetical protein
POPTR_0035s00410g [Populus trichocarpa]
gi|550311935|gb|ERP48138.1| hypothetical protein
POPTR_0035s00410g [Populus trichocarpa]
Length = 381
Score = 80.5 bits (197), Expect = 6e-13
Identities = 46/114 (40%), Positives = 60/114 (52%)
Frame = +1
Query: 403 NVFRASVSTALEPLVSSEDEVKDFFTHKSATVTESLRLEEQIKQXXXXXXXXXXXXXXXX 582
+V A ST +E VS DEV++ E + EE +
Sbjct: 32 SVAEALSSTDVEDNVSGADEVQEL-------QPEMRKEEEHFSRRRLRANPGIGSRKHRV 84
Query: 583 XXXXQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 744
QV+ E EAW AT+EYKEL ++MC +APNLPY+KSLFLGWF+P R+AI
Sbjct: 85 LRRRQVKIEAEAWELATKEYKELLKDMCEHKLAPNLPYMKSLFLGWFEPFRDAI 138
>ref|XP_006857036.1| hypothetical protein AMTR_s00065p00022170 [Amborella trichopoda]
gi|548861119|gb|ERN18503.1| hypothetical protein
AMTR_s00065p00022170 [Amborella trichopoda]
Length = 987
Score = 80.1 bits (196), Expect = 7e-13
Identities = 34/50 (68%), Positives = 41/50 (82%)
Frame = +1
Query: 595 QVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 744
QV+ ETEAW +A EY+EL EMC +APNLPY+KSLFLGWF+PLR+AI
Sbjct: 156 QVKIETEAWERAVREYRELISEMCEQKLAPNLPYMKSLFLGWFEPLRDAI 205
>emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera]
Length = 1312
Score = 80.1 bits (196), Expect = 7e-13
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1
Query: 595 QVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAID 747
QV+ ETEAW + EEY+E+ EMC +APNLPYVK+LFLGWF+PLR AI+
Sbjct: 150 QVKAETEAWERMVEEYREIEREMCEKKLAPNLPYVKALFLGWFEPLREAIE 200
>gb|EOY31498.1| DNA/RNA polymerases superfamily protein isoform 3 [Theobroma cacao]
Length = 927
Score = 79.7 bits (195), Expect = 9e-13
Identities = 34/50 (68%), Positives = 39/50 (78%)
Frame = +1
Query: 595 QVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 744
QV+ ETEAW K EEY+EL EMC +APNLPYVK LFLGWF+P+R AI
Sbjct: 147 QVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEPMREAI 196
>gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
Length = 857
Score = 79.7 bits (195), Expect = 9e-13
Identities = 34/50 (68%), Positives = 39/50 (78%)
Frame = +1
Query: 595 QVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 744
QV+ ETEAW K EEY+EL EMC +APNLPYVK LFLGWF+P+R AI
Sbjct: 25 QVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEPMREAI 74
>gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
Length = 978
Score = 79.7 bits (195), Expect = 9e-13
Identities = 34/50 (68%), Positives = 39/50 (78%)
Frame = +1
Query: 595 QVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 744
QV+ ETEAW K EEY+EL EMC +APNLPYVK LFLGWF+P+R AI
Sbjct: 147 QVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEPMREAI 196
>ref|XP_004491959.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like isoform X3 [Cicer
arietinum]
Length = 1053
Score = 79.7 bits (195), Expect = 9e-13
Identities = 33/51 (64%), Positives = 43/51 (84%)
Frame = +1
Query: 595 QVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAID 747
QV+TETE W +A +EYKEL +MC +APNLPY+KSLFLGWF+PL++AI+
Sbjct: 217 QVKTETEVWEEAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLKDAIE 267
>ref|XP_004491958.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like isoform X2 [Cicer
arietinum]
Length = 1090
Score = 79.7 bits (195), Expect = 9e-13
Identities = 33/51 (64%), Positives = 43/51 (84%)
Frame = +1
Query: 595 QVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAID 747
QV+TETE W +A +EYKEL +MC +APNLPY+KSLFLGWF+PL++AI+
Sbjct: 254 QVKTETEVWEEAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLKDAIE 304
>ref|XP_004491957.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like isoform X1 [Cicer
arietinum]
Length = 1126
Score = 79.7 bits (195), Expect = 9e-13
Identities = 33/51 (64%), Positives = 43/51 (84%)
Frame = +1
Query: 595 QVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAID 747
QV+TETE W +A +EYKEL +MC +APNLPY+KSLFLGWF+PL++AI+
Sbjct: 290 QVKTETEVWEEAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLKDAIE 340
>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Citrus sinensis]
Length = 1026
Score = 79.3 bits (194), Expect = 1e-12
Identities = 34/50 (68%), Positives = 41/50 (82%)
Frame = +1
Query: 595 QVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 744
QV+ ETEAW KA EY+EL +MC +APNLPY+KSLFLGWF+PLR+AI
Sbjct: 192 QVKIETEAWEKAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAI 241
>dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa Japonica Group]
gi|48716846|dbj|BAD23544.1| putative phage-type RNA
polymerase [Oryza sativa Japonica Group]
gi|215694941|dbj|BAG90132.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 951
Score = 79.3 bits (194), Expect = 1e-12
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = +1
Query: 595 QVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 744
Q++ ETEAW +A EEY+EL +MC +APNLPYVKSLFLGWF+PLR+ I
Sbjct: 184 QIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQI 233
>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
single subunit RNA polymerase [Oryza sativa Japonica
Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza
sativa Japonica Group]
Length = 1017
Score = 79.3 bits (194), Expect = 1e-12
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = +1
Query: 595 QVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 744
Q++ ETEAW +A EEY+EL +MC +APNLPYVKSLFLGWF+PLR+ I
Sbjct: 184 QIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQI 233