BLASTX nr result
ID: Ephedra26_contig00025827
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00025827
(538 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006849650.1| hypothetical protein AMTR_s00024p00227830 [A... 58 1e-06
ref|XP_006296878.1| hypothetical protein CARUB_v10012866mg [Caps... 58 1e-06
ref|NP_178674.6| protein early flowering 8 [Arabidopsis thaliana... 58 1e-06
gb|AAL49858.1| putative TPR repeat nuclear phosphoprotein [Arabi... 58 1e-06
ref|XP_004513475.1| PREDICTED: RNA polymerase-associated protein... 57 2e-06
ref|XP_004513474.1| PREDICTED: RNA polymerase-associated protein... 57 2e-06
ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein... 57 2e-06
emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera] 57 2e-06
ref|XP_006587039.1| PREDICTED: RNA polymerase-associated protein... 57 3e-06
ref|XP_006342363.1| PREDICTED: RNA polymerase-associated protein... 57 3e-06
ref|XP_006396118.1| hypothetical protein EUTSA_v10002377mg [Eutr... 57 3e-06
ref|XP_006396117.1| hypothetical protein EUTSA_v10002377mg [Eutr... 57 3e-06
ref|XP_006490821.1| PREDICTED: RNA polymerase-associated protein... 56 5e-06
ref|XP_006451561.1| hypothetical protein CICLE_v10007295mg [Citr... 56 5e-06
gb|EXB38929.1| RNA polymerase-associated protein CTR9-like prote... 56 6e-06
gb|EMJ05100.1| hypothetical protein PRUPE_ppa015419mg, partial [... 55 8e-06
ref|XP_004243718.1| PREDICTED: RNA polymerase-associated protein... 55 8e-06
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein... 55 8e-06
>ref|XP_006849650.1| hypothetical protein AMTR_s00024p00227830 [Amborella trichopoda]
gi|548853225|gb|ERN11231.1| hypothetical protein
AMTR_s00024p00227830 [Amborella trichopoda]
Length = 1078
Score = 58.2 bits (139), Expect = 1e-06
Identities = 25/35 (71%), Positives = 32/35 (91%)
Frame = -1
Query: 106 MGLCPYKLGKLDKAKKAFERVLQLDPENIEALAAV 2
+GLC YKLG+ DKA++AF+RVLQLDPEN+EAL A+
Sbjct: 203 LGLCRYKLGQFDKARQAFQRVLQLDPENVEALVAL 237
>ref|XP_006296878.1| hypothetical protein CARUB_v10012866mg [Capsella rubella]
gi|482565587|gb|EOA29776.1| hypothetical protein
CARUB_v10012866mg [Capsella rubella]
Length = 1090
Score = 58.2 bits (139), Expect = 1e-06
Identities = 25/35 (71%), Positives = 33/35 (94%)
Frame = -1
Query: 106 MGLCPYKLGKLDKAKKAFERVLQLDPENIEALAAV 2
+GLC YKLG+LDKA++AF+RVLQLDP+N+EAL A+
Sbjct: 203 IGLCRYKLGQLDKARQAFDRVLQLDPDNVEALVAL 237
>ref|NP_178674.6| protein early flowering 8 [Arabidopsis thaliana]
gi|207079706|tpd|FAA00428.1| TPA: VERNALIZATION
INDEPENDENCE 6 [Arabidopsis thaliana]
gi|330250911|gb|AEC06005.1| protein early flowering 8
[Arabidopsis thaliana]
Length = 1091
Score = 58.2 bits (139), Expect = 1e-06
Identities = 25/35 (71%), Positives = 33/35 (94%)
Frame = -1
Query: 106 MGLCPYKLGKLDKAKKAFERVLQLDPENIEALAAV 2
+GLC YKLG+LDKA++AF+RVLQLDP+N+EAL A+
Sbjct: 203 IGLCRYKLGQLDKARQAFDRVLQLDPDNVEALVAL 237
>gb|AAL49858.1| putative TPR repeat nuclear phosphoprotein [Arabidopsis thaliana]
Length = 740
Score = 58.2 bits (139), Expect = 1e-06
Identities = 25/35 (71%), Positives = 33/35 (94%)
Frame = -1
Query: 106 MGLCPYKLGKLDKAKKAFERVLQLDPENIEALAAV 2
+GLC YKLG+LDKA++AF+RVLQLDP+N+EAL A+
Sbjct: 203 IGLCRYKLGQLDKARQAFDRVLQLDPDNVEALVAL 237
>ref|XP_004513475.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform
X2 [Cicer arietinum]
Length = 956
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/35 (71%), Positives = 32/35 (91%)
Frame = -1
Query: 106 MGLCPYKLGKLDKAKKAFERVLQLDPENIEALAAV 2
+GLC YKLG+ +KA++AFERVLQLDPEN+EAL A+
Sbjct: 79 IGLCRYKLGQFEKARQAFERVLQLDPENVEALVAL 113
>ref|XP_004513474.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform
X1 [Cicer arietinum]
Length = 1080
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/35 (71%), Positives = 32/35 (91%)
Frame = -1
Query: 106 MGLCPYKLGKLDKAKKAFERVLQLDPENIEALAAV 2
+GLC YKLG+ +KA++AFERVLQLDPEN+EAL A+
Sbjct: 203 IGLCRYKLGQFEKARQAFERVLQLDPENVEALVAL 237
>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
product [Vitis vinifera]
Length = 1091
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/35 (71%), Positives = 32/35 (91%)
Frame = -1
Query: 106 MGLCPYKLGKLDKAKKAFERVLQLDPENIEALAAV 2
+GLC YKLG+ +KA+KAF+RVLQLDPEN+EAL A+
Sbjct: 203 IGLCCYKLGQFEKARKAFQRVLQLDPENVEALVAL 237
>emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera]
Length = 788
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/35 (71%), Positives = 32/35 (91%)
Frame = -1
Query: 106 MGLCPYKLGKLDKAKKAFERVLQLDPENIEALAAV 2
+GLC YKLG+ +KA+KAF+RVLQLDPEN+EAL A+
Sbjct: 203 IGLCCYKLGQFEKARKAFQRVLQLDPENVEALVAL 237
>ref|XP_006587039.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
max]
Length = 1089
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/35 (71%), Positives = 32/35 (91%)
Frame = -1
Query: 106 MGLCPYKLGKLDKAKKAFERVLQLDPENIEALAAV 2
+GLC YKLG+ +KA++AFERVLQLDPEN+EAL A+
Sbjct: 203 IGLCRYKLGQFEKAQQAFERVLQLDPENVEALVAL 237
>ref|XP_006342363.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Solanum
tuberosum]
Length = 1095
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/35 (74%), Positives = 32/35 (91%)
Frame = -1
Query: 106 MGLCPYKLGKLDKAKKAFERVLQLDPENIEALAAV 2
+GLC YKLG+LDKAK+AF RVLQLDPEN++AL A+
Sbjct: 203 IGLCRYKLGQLDKAKQAFCRVLQLDPENVDALVAL 237
>ref|XP_006396118.1| hypothetical protein EUTSA_v10002377mg [Eutrema salsugineum]
gi|557096389|gb|ESQ36897.1| hypothetical protein
EUTSA_v10002377mg [Eutrema salsugineum]
Length = 1097
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/35 (68%), Positives = 33/35 (94%)
Frame = -1
Query: 106 MGLCPYKLGKLDKAKKAFERVLQLDPENIEALAAV 2
+G+C YKLG+LDKA++AF+RVLQLDP+N+EAL A+
Sbjct: 209 IGVCRYKLGQLDKARQAFDRVLQLDPDNVEALVAL 243
>ref|XP_006396117.1| hypothetical protein EUTSA_v10002377mg [Eutrema salsugineum]
gi|557096388|gb|ESQ36896.1| hypothetical protein
EUTSA_v10002377mg [Eutrema salsugineum]
Length = 1091
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/35 (68%), Positives = 33/35 (94%)
Frame = -1
Query: 106 MGLCPYKLGKLDKAKKAFERVLQLDPENIEALAAV 2
+G+C YKLG+LDKA++AF+RVLQLDP+N+EAL A+
Sbjct: 203 IGVCRYKLGQLDKARQAFDRVLQLDPDNVEALVAL 237
>ref|XP_006490821.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Citrus
sinensis]
Length = 1088
Score = 56.2 bits (134), Expect = 5e-06
Identities = 27/42 (64%), Positives = 34/42 (80%), Gaps = 3/42 (7%)
Frame = -1
Query: 118 PGTI---MGLCPYKLGKLDKAKKAFERVLQLDPENIEALAAV 2
PG I +GLC YKLG+L KA++AF+R LQLDPEN+EAL A+
Sbjct: 196 PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 237
>ref|XP_006451561.1| hypothetical protein CICLE_v10007295mg [Citrus clementina]
gi|557554787|gb|ESR64801.1| hypothetical protein
CICLE_v10007295mg [Citrus clementina]
Length = 1088
Score = 56.2 bits (134), Expect = 5e-06
Identities = 27/42 (64%), Positives = 34/42 (80%), Gaps = 3/42 (7%)
Frame = -1
Query: 118 PGTI---MGLCPYKLGKLDKAKKAFERVLQLDPENIEALAAV 2
PG I +GLC YKLG+L KA++AF+R LQLDPEN+EAL A+
Sbjct: 196 PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 237
>gb|EXB38929.1| RNA polymerase-associated protein CTR9-like protein [Morus
notabilis]
Length = 1107
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = -1
Query: 106 MGLCPYKLGKLDKAKKAFERVLQLDPENIEALAA 5
+GLC YKLG+ +KA++AF+RVLQLDPEN+EAL A
Sbjct: 203 IGLCRYKLGQFEKARQAFQRVLQLDPENVEALVA 236
>gb|EMJ05100.1| hypothetical protein PRUPE_ppa015419mg, partial [Prunus persica]
Length = 1003
Score = 55.5 bits (132), Expect = 8e-06
Identities = 23/35 (65%), Positives = 32/35 (91%)
Frame = -1
Query: 106 MGLCPYKLGKLDKAKKAFERVLQLDPENIEALAAV 2
+GLC YK+G+ +KA++AF+RVLQLDPEN+EAL A+
Sbjct: 113 IGLCRYKMGQFEKARQAFQRVLQLDPENVEALVAL 147
>ref|XP_004243718.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Solanum
lycopersicum]
Length = 1095
Score = 55.5 bits (132), Expect = 8e-06
Identities = 25/35 (71%), Positives = 31/35 (88%)
Frame = -1
Query: 106 MGLCPYKLGKLDKAKKAFERVLQLDPENIEALAAV 2
+GLC YKLG+ DKAK+AF RVLQLDPEN++AL A+
Sbjct: 203 IGLCRYKLGQFDKAKQAFCRVLQLDPENVDALVAL 237
>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
max]
Length = 1088
Score = 55.5 bits (132), Expect = 8e-06
Identities = 24/35 (68%), Positives = 32/35 (91%)
Frame = -1
Query: 106 MGLCPYKLGKLDKAKKAFERVLQLDPENIEALAAV 2
+GLC YKLG+ +KA++AFERVLQLDPEN+E+L A+
Sbjct: 203 IGLCRYKLGQFEKAQQAFERVLQLDPENVESLIAL 237