BLASTX nr result

ID: Ephedra26_contig00025614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00025614
         (530 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18035.1| unknown [Picea sitchensis]                             171   7e-41
ref|XP_001781331.1| predicted protein [Physcomitrella patens] gi...    92   7e-17
ref|XP_002968188.1| hypothetical protein SELMODRAFT_440352 [Sela...    62   1e-07
ref|XP_002976192.1| hypothetical protein SELMODRAFT_443104 [Sela...    59   5e-07

>gb|ABR18035.1| unknown [Picea sitchensis]
          Length = 466

 Score =  171 bits (434), Expect = 7e-41
 Identities = 82/156 (52%), Positives = 112/156 (71%)
 Frame = -1

Query: 470 MGKGRNQKNRSNDKKHANMHQEESFLTEARKLKQQAERKANGPERIPALERCCHLYNQSL 291
           MG+GRN+K  S+ +        ES LTEA KLKQQAERK+NGPER+P LE+C  L+  +L
Sbjct: 1   MGRGRNRKGNSSSR-------HESILTEASKLKQQAERKSNGPERVPLLEKCSQLFQNAL 53

Query: 290 TMPLPPSEKEDVLFDLGEVYMLWSNAVKKGAFIADLRAFKVTAKKNPVVESKLETLISAA 111
             PL   +KE+ LFDLGE ++LWS+AV+KG  + +  AFK   KK+  ++ +LE  + AA
Sbjct: 54  QFPLSLRDKEEALFDLGEAFLLWSSAVRKGPCLGNHSAFKGNIKKHHAIQLQLEASLYAA 113

Query: 110 DLCRKSTEAYKMAFSIDGGHLKREALINCANALCDW 3
           +LCR+S E+Y+  FS++GG LK+E+ INCANALCDW
Sbjct: 114 NLCRQSVESYRKIFSMEGGELKQESRINCANALCDW 149


>ref|XP_001781331.1| predicted protein [Physcomitrella patens]
           gi|162667224|gb|EDQ53859.1| predicted protein
           [Physcomitrella patens]
          Length = 221

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 1/157 (0%)
 Frame = -1

Query: 470 MGKGRNQKNRSNDKKHANMHQEESFLTEARKLKQQAERKANGPERIPALERCCHLYNQSL 291
           M   R    RS+          ES L EAR++KQ AERK +G  ++ +LE+   L+  +L
Sbjct: 1   MAPKRRPSARSSRNAPPPATSAESLLAEARRVKQAAERKLDGAAKVGSLEQAVLLFQNAL 60

Query: 290 TMPLPPSEKEDVLFDLGEVYMLWSNAVKKGAFIADLRAFKVTAKKNPVVESKLETLISAA 111
           +M L    +E+ LFDLGE ++  + A++          F+   KK   +E + +  + A+
Sbjct: 61  SMRLSLPVQEEALFDLGETFLEMAGALQTRGLHLAGSPFRNEKKKAQALEIQSQASVDAS 120

Query: 110 DLCRKSTEAYKMAFSIDG-GHLKREALINCANALCDW 3
              R+S E Y+   +++G G LK+EAL+N  NALC+W
Sbjct: 121 SATRQSFEMYERVCALEGAGELKQEALVNSGNALCEW 157


>ref|XP_002968188.1| hypothetical protein SELMODRAFT_440352 [Selaginella moellendorffii]
            gi|300163832|gb|EFJ30442.1| hypothetical protein
            SELMODRAFT_440352 [Selaginella moellendorffii]
          Length = 1935

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
 Frame = -1

Query: 386  ARKLKQQAERKANGPERIPALERCCHLYNQSLTMPLPPSEKEDVLFDLGEVYMLWSNAVK 207
            +RKLKQQAERK+ G  R P L R   ++  +L       ++++ LFDLG+   LW+ ++ 
Sbjct: 1362 SRKLKQQAERKS-GIAREPLLARSAEIFESALGQQALQQDRDECLFDLGDTCFLWAKSI- 1419

Query: 206  KGAFIADLRAFKVT--AKKNPVVESKLETLISAADLCRKSTEAYKMAFSIDGGHLKREAL 33
              A      A  +T   KK      KLE    AA L  KS E +     I+   LK EAL
Sbjct: 1420 --ATAVPSLATPLTGDTKKARAEVLKLEAFARAAPLFTKSFEIFD---KIELSELKAEAL 1474

Query: 32   INCANALCD 6
             N  + LC+
Sbjct: 1475 TNSGSVLCE 1483


>ref|XP_002976192.1| hypothetical protein SELMODRAFT_443104 [Selaginella moellendorffii]
            gi|300156468|gb|EFJ23097.1| hypothetical protein
            SELMODRAFT_443104 [Selaginella moellendorffii]
          Length = 1941

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 45/129 (34%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
 Frame = -1

Query: 386  ARKLKQQAERKANGPERIPALERCCHLYNQSLTMPLPPSEKEDVLFDLGEVYMLWSNAVK 207
            +RKLKQQAERK+ G  R P L R   ++  +L       ++++ LFDL +   LW+ ++ 
Sbjct: 1340 SRKLKQQAERKS-GIAREPLLARSAEIFESALGQQALQQDRDECLFDLADTCFLWAKSI- 1397

Query: 206  KGAFIADLRAFKVT--AKKNPVVESKLETLISAADLCRKSTEAYKMAFSIDGGHLKREAL 33
              A      A  +T   KK      KLE    AA L  KS E +     I+   LK EAL
Sbjct: 1398 --ATAVPSLATPLTGDTKKARAEVLKLEAFARAAPLFTKSFEIFD---KIELSELKAEAL 1452

Query: 32   INCANALCD 6
             N  + LC+
Sbjct: 1453 TNSGSVLCE 1461


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