BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00025611
         (1002 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU90206.1| putative polyprotein [Oryza sativa Japonica Group]     102   3e-19
gb|EOY32548.1| Uncharacterized protein TCM_040529 [Theobroma cacao]   101   4e-19
emb|CAE02930.3| OSJNBa0014K14.2 [Oryza sativa Japonica Group]         101   4e-19
gb|AAT93941.1| putative polyprotein [Oryza sativa Japonica Group]     101   4e-19
gb|EEE51974.1| hypothetical protein OsJ_33644 [Oryza sativa Japo...   100   7e-19
emb|CAD40924.3| OSJNBa0033G16.12 [Oryza sativa Japonica Group]        100   7e-19
gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao]   100   9e-19
gb|AAT39267.1| putative polyprotein [Oryza sativa Japonica Group...   100   9e-19
gb|AAX96807.1| retrotransposon protein, putative, Ty1-copia sub-...   100   1e-18
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]         100   1e-18
gb|ABA98136.2| retrotransposon protein, putative, Ty1-copia subc...   100   1e-18
gb|ABA99836.1| retrotransposon protein, putative, Ty1-copia subc...   100   2e-18
gb|ABA93820.1| retrotransposon protein, putative, Ty1-copia subc...   100   2e-18
emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]   100   2e-18
gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsi...   100   2e-18
ref|XP_004084355.1| PREDICTED: uncharacterized protein LOC101155...    99   2e-18
gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subc...    99   2e-18
gb|AAX92828.1| retrotransposon protein, putative, Ty1-copia sub-...    99   2e-18
emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]          99   2e-18
gb|ABF98099.1| retrotransposon protein, putative, Ty1-copia subc...    99   2e-18

>gb|AAU90206.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1256

 Score =  102 bits (253), Expect = 3e-19
 Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 9/202 (4%)
 Frame = -2

Query: 971  VNHKVGE-----DLWNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCLARK*TRA 807
            VNH  G      ++W+ R+ +I N  L             +I+K S  C SC+  K  R 
Sbjct: 486  VNHICGSVDDEANVWHSRLCHI-NFGLMSRLSSMYLIPRFSIVKGSK-CHSCVQSKQPRK 543

Query: 806  SFLLSENRRKIKLDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLKYKFHAFQY 627
                +E R    L+ +H+DL ++I  L+     Y+  LIDD  R  ++Y LK K  A  Y
Sbjct: 544  PHKAAEERNLAPLEFLHSDLCEMIGVLTKGGKRYFMTLIDDATRFCYVYLLKMKDEALDY 603

Query: 626  FKSF----QNYIGLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ*NGIVERK 459
            FK +    +N +   IK L++++G EF S EF++   +H I H+    YSP+ NGI ERK
Sbjct: 604  FKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHESAPPYSPESNGIAERK 663

Query: 458  NQFLMNMA*AMLNNVDLDNIGW 393
            N+ L N+  AML+   L    W
Sbjct: 664  NRTLTNLVNAMLDTAGLPKAWW 685


>gb|EOY32548.1| Uncharacterized protein TCM_040529 [Theobroma cacao]
          Length = 1266

 Score =  101 bits (252), Expect = 4e-19
 Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
 Frame = -2

Query: 947  LWNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCLARK*TRASF-LLSENRRKIK 771
            LW+RR+G+I+  ++K      + +    I +   TC  CL  K +R  F   S+ R   +
Sbjct: 458  LWHRRLGHINYQFIKNMGSLNLVNDMPVITEVEKTCEVCLQGKQSRHPFPKQSQTRATNR 517

Query: 770  LDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLKYKFHAFQYFKSF----QNYI 603
            L  IHTD+   I  LS++   Y+   IDD  R  +I+FLK K  A QYF  F    +   
Sbjct: 518  LQLIHTDICGPIGTLSLNGNKYFILFIDDFSRFCWIFFLKQKSEAIQYFMKFKVLVEKQT 577

Query: 602  GLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ*NGIVERKNQFLMNMA*AML 423
               IK+L+++ G E++S EF+  + Q  I      +YSPQ NG+ ERKN+ +M M   +L
Sbjct: 578  DQKIKALRSDNGSEYTSNEFKALLTQEGIKQFLTVTYSPQQNGVSERKNRTIMEMIRCLL 637

Query: 422  NNVDLDNIGWMRSS 381
                +    W  ++
Sbjct: 638  FEQQMPKYFWAEAA 651


>emb|CAE02930.3| OSJNBa0014K14.2 [Oryza sativa Japonica Group]
          Length = 628

 Score =  101 bits (252), Expect = 4e-19
 Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 9/202 (4%)
 Frame = -2

Query: 971 VNHKVGE-----DLWNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCLARK*TRA 807
           VNH  G      ++W+ R+ +I+   + + +  ++R      I   S C SC+  K  R 
Sbjct: 352 VNHICGSVDDEANVWHSRLCHINFGLMSRLS--SMRLIPKFSIVKGSKCHSCVQSKQPRK 409

Query: 806 SFLLSENRRKIKLDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLKYKFHAFQY 627
               +E R    L+ +H+DL ++ R L+     Y+  LIDD  R  ++Y LK K  A  Y
Sbjct: 410 PHNAAEERNLAPLELLHSDLCEMNRVLTKGGKRYFMTLIDDATRFYYVYLLKTKDKALDY 469

Query: 626 FKSF----QNYIGLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ*NGIVERK 459
           FK +    +N +   IK L++++G EF S EF++   +H I H++   YSP+ NGI ERK
Sbjct: 470 FKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERK 529

Query: 458 NQFLMNMA*AMLNNVDLDNIGW 393
           N+ L ++  AML+   L    W
Sbjct: 530 NRTLTDLVNAMLDTAGLPKAWW 551


>gb|AAT93941.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1433

 Score =  101 bits (252), Expect = 4e-19
 Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 9/202 (4%)
 Frame = -2

Query: 971  VNHKVGE-----DLWNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCLARK*TRA 807
            VNH  G      ++W+ R+ +I+   + + +   +   + +I+K S  C SC+  K  R 
Sbjct: 420  VNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLIP-KFSIVKGSK-CHSCVQSKQPRK 477

Query: 806  SFLLSENRRKIKLDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLKYKFHAFQY 627
                +E R    L+ +H+DL ++   L+  E  Y+  LIDD  R  ++Y LK K  A  Y
Sbjct: 478  PHKAAEERNLAPLELLHSDLCEMNGVLTKGEKRYFMTLIDDATRFCYVYLLKTKDEALDY 537

Query: 626  FKSF----QNYIGLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ*NGIVERK 459
            FK +    +N +   IK L++++G EF S EF++   +H I H++   YSP+ NGI ERK
Sbjct: 538  FKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERK 597

Query: 458  NQFLMNMA*AMLNNVDLDNIGW 393
            N+ L ++  AML+   L    W
Sbjct: 598  NRTLTDLVNAMLDTAGLPKAWW 619


>gb|EEE51974.1| hypothetical protein OsJ_33644 [Oryza sativa Japonica Group]
          Length = 679

 Score =  100 bits (250), Expect = 7e-19
 Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 9/202 (4%)
 Frame = -2

Query: 971 VNHKVGE-----DLWNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCLARK*TRA 807
           VNH  G      ++W+ R+ +I+   + + +   +   + +I+K S  C SC+  K  R 
Sbjct: 160 VNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLIP-KFSIVKGSK-CHSCVQSKQPRK 217

Query: 806 SFLLSENRRKIKLDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLKYKFHAFQY 627
               +E R    L+ +H+DL ++   L+     Y+  LIDD  R  ++Y LK K  A  Y
Sbjct: 218 PHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDY 277

Query: 626 FKSF----QNYIGLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ*NGIVERK 459
           FK +    +N +   IK L++N+G EF S EF++   +H I H++   YSP+ NGI ERK
Sbjct: 278 FKIYKAEVENQLDRKIKRLRSNRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERK 337

Query: 458 NQFLMNMA*AMLNNVDLDNIGW 393
           N+ L ++  AML+   L    W
Sbjct: 338 NRTLTDLVNAMLDTAGLPKAWW 359


>emb|CAD40924.3| OSJNBa0033G16.12 [Oryza sativa Japonica Group]
          Length = 1320

 Score =  100 bits (250), Expect = 7e-19
 Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 9/202 (4%)
 Frame = -2

Query: 971  VNHKVGE-----DLWNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCLARK*TRA 807
            VNH  G      ++W+ R+ +I+   + + +   +   + +I+K S  C SC+  K  R 
Sbjct: 420  VNHICGSVDDEANVWHSRLCHINFGLMSQLSSMCLIP-KFSIVKGSK-CHSCVQSKQPRK 477

Query: 806  SFLLSENRRKIKLDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLKYKFHAFQY 627
                +E R    L+ +H+DL ++   L+     Y+  LIDD  R  ++Y LK K  A  Y
Sbjct: 478  PHKAAEERNLAPLELLHSDLCEMNGALTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDY 537

Query: 626  FKSF----QNYIGLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ*NGIVERK 459
            FK +    +N +   IK L++++G EF S EF++   +H I H++   YSP+ NGI ERK
Sbjct: 538  FKIYKAEVENQLDRKIKRLRSDRGGEFCSNEFDLFCEEHGIIHERTPPYSPESNGIAERK 597

Query: 458  NQFLMNMA*AMLNNVDLDNIGW 393
            N+ L ++  AML+ V L    W
Sbjct: 598  NRTLTDLVNAMLDTVGLPKAWW 619


>gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao]
          Length = 1318

 Score =  100 bits (249), Expect = 9e-19
 Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 5/194 (2%)
 Frame = -2

Query: 947  LWNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCLARK*TRASF-LLSENRRKIK 771
            LW+RR+G+I+  ++K      + +    I +   TC  CL  K +R  F   S+ R   +
Sbjct: 458  LWHRRLGHINYQFIKNMGSLNLVNDMPIITEVEKTCEVCLQGKQSRHPFPKQSQTRTANR 517

Query: 770  LDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLKYKFHAFQYFKSF----QNYI 603
            L  IHTD+   I  LS++   Y+   IDD  R  +I+FLK K  A QYF  F    +   
Sbjct: 518  LQLIHTDICGPIGTLSLNGNKYFILFIDDFSRFCWIFFLKQKSEAIQYFMKFKVLVEKQT 577

Query: 602  GLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ*NGIVERKNQFLMNMA*AML 423
               IK+L+++ G E++S EF+  + Q  I       YSPQ NG+ ERKN+ +M M   +L
Sbjct: 578  DQKIKALRSDNGSEYTSNEFKALLTQEGIKQFLTVPYSPQQNGVSERKNRTIMEMIRCLL 637

Query: 422  NNVDLDNIGWMRSS 381
                +    W  ++
Sbjct: 638  FEQQMPKYFWAEAA 651


>gb|AAT39267.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|50878407|gb|AAT85181.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1297

 Score =  100 bits (249), Expect = 9e-19
 Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 9/202 (4%)
 Frame = -2

Query: 971  VNHKVGE-----DLWNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCLARK*TRA 807
            VNH  G      ++W+ R+ +I+   + + +   + S + +I+K S  C SC+  K  R 
Sbjct: 420  VNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLIS-KFSIVKGSK-CHSCVQSKQPRK 477

Query: 806  SFLLSENRRKIKLDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLKYKFHAFQY 627
                +E R    L+ +H+DL ++   L+     Y+  LIDD  R  ++Y LK K  A  Y
Sbjct: 478  PHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDVTRFCYVYLLKTKDEALDY 537

Query: 626  FKSF----QNYIGLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ*NGIVERK 459
            FK +    +N +   IK L++++G EF S EF++   +H I H++   YSP+ NGI ERK
Sbjct: 538  FKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERK 597

Query: 458  NQFLMNMA*AMLNNVDLDNIGW 393
            N+ L ++  AML+   L    W
Sbjct: 598  NRTLTDLVNAMLDTAGLPKAWW 619


>gb|AAX96807.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77550001|gb|ABA92798.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1234

 Score =  100 bits (248), Expect = 1e-18
 Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 9/196 (4%)
 Frame = -2

Query: 971  VNHKVGE-----DLWNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCLARK*TRA 807
            VNH  G      ++W+ R+ +I+   + + +   +   + +I+K S+ C SC+  K  R 
Sbjct: 420  VNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLIL-KFSIVKGSN-CHSCVQSKQPRK 477

Query: 806  SFLLSENRRKIKLDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLKYKFHAFQY 627
                +E R    L+ +H+DL ++   L+  E  Y+  LIDD  R  ++Y LK K  A  Y
Sbjct: 478  PHKAAEERNLAPLELLHSDLCEMNGVLTKGEKRYFMTLIDDATRFCYVYLLKTKDEALDY 537

Query: 626  FKSF----QNYIGLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ*NGIVERK 459
            FK +    +N +   IK L++++G EF S EF++   +H I H++   YSP+ NGI ERK
Sbjct: 538  FKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERK 597

Query: 458  NQFLMNMA*AMLNNVD 411
            N+ L ++  AML+  D
Sbjct: 598  NRTLTDLVNAMLDTAD 613


>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  100 bits (248), Expect = 1e-18
 Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 9/202 (4%)
 Frame = -2

Query: 971  VNHKVGE-----DLWNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCLARK*TRA 807
            VNH  G      ++W+ R+ +I+   + + +   + S     I   S C SC+  K  R 
Sbjct: 420  VNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLIS--KFYIVKGSKCHSCVQSKQPRK 477

Query: 806  SFLLSENRRKIKLDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLKYKFHAFQY 627
                +E R    L+ +H+DL ++   L+     Y+  LIDD  R  ++Y LK K  A  Y
Sbjct: 478  PHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDY 537

Query: 626  FKSF----QNYIGLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ*NGIVERK 459
            FK +    +N +   IK L++++G EF S EF++   +H I H++   YSP+ NGI ERK
Sbjct: 538  FKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERK 597

Query: 458  NQFLMNMA*AMLNNVDLDNIGW 393
            N+ L ++  AML+   L    W
Sbjct: 598  NRTLTDLVNAMLDTAGLPKAWW 619


>gb|ABA98136.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1249

 Score =  100 bits (248), Expect = 1e-18
 Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 9/202 (4%)
 Frame = -2

Query: 971  VNHKVGE-----DLWNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCLARK*TRA 807
            VNH  G      ++W+ R+ +I+   + + +   +    N  I   S C SC+  K  R 
Sbjct: 420  VNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLIP--NFSIVKGSKCHSCVQSKQPRK 477

Query: 806  SFLLSENRRKIKLDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLKYKFHAFQY 627
                +E R    L+ +H+DL ++   L+     Y+  LIDD  R  ++Y LK K  A  Y
Sbjct: 478  PHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDY 537

Query: 626  FKSF----QNYIGLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ*NGIVERK 459
            FK +    +N +   IK L++++G EF S EF++   +H I H++   YSP+ NGI ERK
Sbjct: 538  FKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERK 597

Query: 458  NQFLMNMA*AMLNNVDLDNIGW 393
            N+ L ++  AML+   L    W
Sbjct: 598  NRTLTDLVNAMLDTAGLPKAWW 619


>gb|ABA99836.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1302

 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 9/202 (4%)
 Frame = -2

Query: 971  VNHKVGE-----DLWNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCLARK*TRA 807
            VNH  G      ++W+ R+ +I+   + + +   +   + +I+K S  C SC+  K  R 
Sbjct: 420  VNHICGSVDDEANVWHSRLCHINFVLMSRLSSMCLIP-KFSIVKGSK-CHSCVQSKQPRK 477

Query: 806  SFLLSENRRKIKLDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLKYKFHAFQY 627
                +E R    L+ +H+DL ++   L+     Y+  LIDD  R  ++Y LK K  A  Y
Sbjct: 478  PHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDY 537

Query: 626  FKSF----QNYIGLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ*NGIVERK 459
            FK +    +N +   IK L++++G EF S EF++   +H I H++   YSP+ NGI ERK
Sbjct: 538  FKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERK 597

Query: 458  NQFLMNMA*AMLNNVDLDNIGW 393
            N+ L ++  AML+   L    W
Sbjct: 598  NRTLTDLVNAMLDTAGLPKAWW 619


>gb|ABA93820.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1166

 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 68/213 (31%), Positives = 111/213 (52%), Gaps = 9/213 (4%)
 Frame = -2

Query: 971 VNHKVGE-----DLWNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCLARK*TRA 807
           VNH  G      ++W+ R+ +I+   + + +  ++R      I   S C SC+  K  R 
Sbjct: 284 VNHICGSVDDEANVWHSRLCHINFGLMSRLS--SMRLIPKFSIVKCSKCHSCVQPKQPRK 341

Query: 806 SFLLSENRRKIKLDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLKYKFHAFQY 627
               +E R   +L+ +H+DL ++   L+     Y+  LIDD  R  ++Y LK K  A  Y
Sbjct: 342 PHKAAEERNLAQLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDY 401

Query: 626 FKSF----QNYIGLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ*NGIVERK 459
           FK +    +N +   IK L++++G EF S EF++   +H I H++   YSP+ NGI E+K
Sbjct: 402 FKIYKAEDENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAEKK 461

Query: 458 NQFLMNMA*AMLNNVDLDNIGWMRSSWQSSLLI 360
           N+ L ++  AM     LD  G  ++ W  +LLI
Sbjct: 462 NRTLTDLVNAM-----LDTAGLPKAWWGEALLI 489


>emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]
          Length = 1269

 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 65/200 (32%), Positives = 102/200 (51%), Gaps = 6/200 (3%)
 Frame = -2

Query: 974  IVNHKVGEDL-WNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCLARK*TRASFL 798
            + + K+ E + W++R G+ +   L+   E  +      I  N+ TC SC   K  R  F 
Sbjct: 435  VFSAKIDESVVWHKRYGHFNLKSLRFMQEAGMVEDMPEISVNAQTCESCELGKQQRQPFP 494

Query: 797  LSENRRKI-KLDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLKYKFHAFQYFK 621
             + ++R   KL+ IH+D+   +   S+    Y+   IDD  R +++YFLK K      FK
Sbjct: 495  QNMSKRATHKLELIHSDICGPMSTTSLSNNVYFALFIDDFSRMTWVYFLKTKSQVLSMFK 554

Query: 620  SFQNYI----GLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ*NGIVERKNQ 453
            SF+  +    G  +K L+ + G E++S EF V  ++  I HQ    YSPQ NG+ +RKN+
Sbjct: 555  SFKKMVETQSGQNVKVLRTDNGGEYTSKEFSVFCQEAGIVHQLTAPYSPQQNGVSKRKNR 614

Query: 452  FLMNMA*AMLNNVDLDNIGW 393
             +M MA  ML    L  + W
Sbjct: 615  TVMEMARCMLFEKKLPKLLW 634


>gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 822

 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 65/186 (34%), Positives = 98/186 (52%), Gaps = 5/186 (2%)
 Frame = -2

Query: 950 DLWNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCLARK*TRASFLL-SENRRKI 774
           +LW++R+G+  ++ LK      + +           C SC+  K +R  F   SE R K 
Sbjct: 158 ELWHKRLGHTGHSNLKILQSKEMVTGLPKFNVEEGKCESCILSKHSRDPFPKESETRAKH 217

Query: 773 KLDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLKYKFHAFQYFKSFQNYI--- 603
           KL+ IH+D+   ++N SI+   Y    IDD  R  ++YFLK K   FQ FK F+N +   
Sbjct: 218 KLELIHSDVCGPMQNSSINGSRYILTFIDDATRMVWVYFLKAKSEVFQTFKKFKNLVENN 277

Query: 602 -GLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ*NGIVERKNQFLMNMA*AM 426
               IK L+ ++G E+ S EF   +  + I  Q   +YSPQ N + ER+N+ L+ MA AM
Sbjct: 278 ANCRIKKLRIDRGTEYLSKEFSEFLEGNGIERQLTAAYSPQQNEVSERRNRSLVEMARAM 337

Query: 425 LNNVDL 408
           +   DL
Sbjct: 338 IKAKDL 343


>ref|XP_004084355.1| PREDICTED: uncharacterized protein LOC101155079 [Oryzias latipes]
          Length = 1199

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 7/208 (3%)
 Frame = -2

Query: 1001 YQVEFDKEIIVNHK--VGEDLWNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCL 828
            YQ++  K++ V H   V   LW++R+G+ +     K   + V     T +   S C  C+
Sbjct: 527  YQLDGKKDLQVCHNASVAASLWHQRLGHTTKLKELKDLVNGVDFSTETEV---SFCEGCV 583

Query: 827  ARK*TRASFL-LSENRRKIKLDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLK 651
              K ++  +  +   R K ++  IH+D+   ++  SI    Y+   IDD+ RC  +YFLK
Sbjct: 584  EGKLSKQPYKSIGGIRSKHRMQLIHSDVCGPMQTESIGGTKYFVTFIDDYSRCCKVYFLK 643

Query: 650  YKFHAFQYFKSFQ----NYIGLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ 483
            +K      FK F+    N  G  +K L+ + G E++S EF+  ++   I H+    +SPQ
Sbjct: 644  HKNEVLTKFKEFERTFTNECGQAVKRLRTDNGGEYTSREFQEYLKAQGIQHEVTVPHSPQ 703

Query: 482  *NGIVERKNQFLMNMA*AMLNNVDLDNI 399
             NG+ ERKN+ L+  A +ML++  L  I
Sbjct: 704  QNGVAERKNRTLVEAARSMLSHAKLPKI 731


>gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 68/212 (32%), Positives = 112/212 (52%), Gaps = 9/212 (4%)
 Frame = -2

Query: 971  VNHKVGE-----DLWNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCLARK*TRA 807
            VNH  G      ++W+ R+ +I+   + + +   +   + +I+K S  C SC+  K  R 
Sbjct: 420  VNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLIP-KFSIVKGSK-CHSCVQSKQPRK 477

Query: 806  SFLLSENRRKIKLDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLKYKFHAFQY 627
                +E R    L+ +H+DL ++   L+     Y+  LIDD  R  ++Y LK K  A  Y
Sbjct: 478  PHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDY 537

Query: 626  FKSF----QNYIGLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ*NGIVERK 459
            FK +    +N +   IK L++++G EF S EF++   +H I H++   YSP+ NGI ERK
Sbjct: 538  FKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERK 597

Query: 458  NQFLMNMA*AMLNNVDLDNIGWMRSSWQSSLL 363
            N+ L ++  AM     LD  G  ++ W+ +LL
Sbjct: 598  NRTLTDLVNAM-----LDTAGLPKAWWREALL 624


>gb|AAX92828.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|62733724|gb|AAX95834.1|
            retrotransposon protein, putative, Ty1-copia sub-class
            [Oryza sativa Japonica Group] gi|77550359|gb|ABA93156.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1277

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 9/202 (4%)
 Frame = -2

Query: 971  VNHKVGE-----DLWNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCLARK*TRA 807
            VNH  G      ++W+ R+ +I+   + + +   +   + +I+K S  C SC+  K  R 
Sbjct: 420  VNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLIP-KFSIVKGSK-CHSCVQSKQPRK 477

Query: 806  SFLLSENRRKIKLDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLKYKFHAFQY 627
                +E R    L+ +H+DL ++   L+     Y+  LIDD  R  ++Y LK K  A  Y
Sbjct: 478  PHKAAEERNLASLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDY 537

Query: 626  FKSF----QNYIGLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ*NGIVERK 459
            FK +    +N +   IK L++++G EF S EF++   +H I H++   YSP+ NGI ERK
Sbjct: 538  FKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERK 597

Query: 458  NQFLMNMA*AMLNNVDLDNIGW 393
            N+ L ++  AML+   L    W
Sbjct: 598  NRTLTDLVNAMLDTAGLPKAWW 619


>emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]
          Length = 1342

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 9/202 (4%)
 Frame = -2

Query: 971  VNHKVGE-----DLWNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCLARK*TRA 807
            VNH  G      ++W  R+ +I+   + + +   +   + +I+K S  C SC+  K  R 
Sbjct: 420  VNHICGSVDDEANVWYSRLCHINFGLMSRLSSMCLIP-KFSIVKGSK-CHSCVQSKQPRK 477

Query: 806  SFLLSENRRKIKLDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLKYKFHAFQY 627
                +E R    L+ +H+DLY++   L+     Y+  LIDD     ++Y LK K  A  Y
Sbjct: 478  PHKAAEKRNLAPLELLHSDLYEMNGVLTKGGKRYFMTLIDDATTFCYVYLLKMKDEALDY 537

Query: 626  FKSF----QNYIGLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ*NGIVERK 459
            FK +    +N +   IK L++++G EF S EF++   +H I H++   YSP+ NGI ERK
Sbjct: 538  FKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERK 597

Query: 458  NQFLMNMA*AMLNNVDLDNIGW 393
            N+ L ++  AML+   L    W
Sbjct: 598  NRTLTDLVNAMLDTAGLPKAWW 619


>gb|ABF98099.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 504

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 9/204 (4%)
 Frame = -2

Query: 971 VNHKVGE-----DLWNRRMGYISNTYLKK*AEHAVRSHENTIIKNSSTCISCLARK*TRA 807
           VNH  G      ++W+ R+ +I+   + + +   +   + +I+K S  C SC+  K  R 
Sbjct: 301 VNHICGSVDDEANVWHSRLCHINFGLMFRLSSMCLIP-KFSIVKGSK-CHSCVQSKQPRK 358

Query: 806 SFLLSENRRKIKLDQIHTDLYDLIRNLSIDECNYYTCLIDDHRRCSFIYFLKYKFHAFQY 627
                E R    L+ +H+DL ++   L+     Y+  LIDD  R  ++Y LK K  A  Y
Sbjct: 359 PHKAVEERNLAPLELLHSDLCEMNGVLTKGGKRYFMALIDDATRFCYVYLLKTKDEALDY 418

Query: 626 FKSF----QNYIGLTIKSLKNNQG*EFSSCEFEVNIRQHEINHQKITSYSPQ*NGIVERK 459
           FK +    +N +   IK L++N+G EF S EF++   +H I H++  SYSP+ NGI ERK
Sbjct: 419 FKIYKAEVENQLDRKIKRLRSNRGGEFFSNEFDLFCEEHGIIHERTPSYSPESNGIAERK 478

Query: 458 NQFLMNMA*AMLNNVDLDNIGWMR 387
           N+ L ++  AML+        W R
Sbjct: 479 NRTLTDLVNAMLDTAGQPKAWWGR 502