BLASTX nr result

ID: Ephedra26_contig00025606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00025606
         (557 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006858190.1| hypothetical protein AMTR_s00062p00165700 [A...    59   6e-07

>ref|XP_006858190.1| hypothetical protein AMTR_s00062p00165700 [Amborella trichopoda]
            gi|548862293|gb|ERN19657.1| hypothetical protein
            AMTR_s00062p00165700 [Amborella trichopoda]
          Length = 2407

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 7/170 (4%)
 Frame = +1

Query: 25   ADICLISIL--KVINMSKGAKVLPHTLPLSKMFAQLISFTPAELLKYCFETVDPLKARIL 198
            AD+CL+ ++   V N ++ + VL   LPLS    ++IS  P +LL +C    + +K+RIL
Sbjct: 1471 ADLCLLRVMLVSVWNCTQSSAVL---LPLSMTVQKMISCCPMDLLIHCIYKTNRIKSRIL 1527

Query: 199  SLISESNSLY-STVSDVALVSIGMPLVQKLDLTNCLIYSKKYSWSDFSHRLLEEDIIFIL 375
             LI++ + L+ S   ++ L  +G    +++   +        +    +H    E+ I +L
Sbjct: 1528 FLITQISPLHLSIFGEMFLSVLGNDSSREVPKLDGAYPVNVITEETTNHCFTSEEYILLL 1587

Query: 376  PITLKFFLFD----QRVHMLPLECLTKVSNSYLDILYRGFKKWNSFAFSK 513
            P+ LK+F  +     +   +  EC   +   Y   L +GF  W  F  SK
Sbjct: 1588 PVALKYFFSEFAESSKQKFVYAEC---IPVHYSKTLLQGFSNWQDFVSSK 1634


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