BLASTX nr result
ID: Ephedra26_contig00025493
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00025493
(895 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006307708.1| hypothetical protein CARUB_v10009341mg [Caps... 107 5e-21
ref|NP_175985.1| pentatricopeptide repeat-containing protein [Ar... 99 3e-18
ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containi... 98 5e-18
emb|CBI41008.3| unnamed protein product [Vitis vinifera] 98 5e-18
ref|XP_006392589.1| hypothetical protein EUTSA_v10011551mg [Eutr... 97 6e-18
ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containi... 97 6e-18
ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containi... 97 6e-18
ref|XP_004293582.1| PREDICTED: pentatricopeptide repeat-containi... 97 8e-18
emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera] 96 1e-17
ref|XP_002891858.1| pentatricopeptide repeat-containing protein ... 96 2e-17
ref|XP_006847893.1| hypothetical protein AMTR_s00029p00104950 [A... 94 5e-17
ref|XP_006858124.1| hypothetical protein AMTR_s00062p00111890 [A... 93 1e-16
ref|NP_566445.1| pentatricopeptide repeat-containing protein [Ar... 93 1e-16
gb|AAM67043.1| unknown [Arabidopsis thaliana] 93 2e-16
ref|XP_002518584.1| pentatricopeptide repeat-containing protein,... 92 2e-16
gb|ESW31215.1| hypothetical protein PHAVU_002G219400g [Phaseolus... 92 3e-16
ref|XP_002518506.1| pentatricopeptide repeat-containing protein,... 91 4e-16
gb|EOY20533.1| Tetratricopeptide repeat (TPR)-like superfamily p... 91 6e-16
ref|XP_006299007.1| hypothetical protein CARUB_v10015134mg [Caps... 91 6e-16
ref|XP_006847894.1| hypothetical protein AMTR_s00029p00105510 [A... 91 7e-16
>ref|XP_006307708.1| hypothetical protein CARUB_v10009341mg [Capsella rubella]
gi|482576419|gb|EOA40606.1| hypothetical protein
CARUB_v10009341mg [Capsella rubella]
Length = 401
Score = 107 bits (268), Expect = 5e-21
Identities = 74/270 (27%), Positives = 134/270 (49%), Gaps = 3/270 (1%)
Frame = +3
Query: 12 EDLAARVITLYGRARCPEHAIRTYASLRTVGCVPSTRFFNALITALLYSGKPDIAKE-FM 188
E AAR+I+LYG+A E+A + + + C S FNAL++A S K D+ +E F
Sbjct: 112 EGFAARIISLYGKAGLFENAQKVFDEMPDRNCKRSVLSFNALLSAYRLSKKFDVVEELFN 171
Query: 189 DSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLISS 368
+ GKL++ P++ + IK LC + A++ L ++ + + PD+V +T+ L+SS
Sbjct: 172 ELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTV---LLSS 228
Query: 369 YTKNMLDNAKAQEIVDALLESCPDSEIHS-AIRVRWLCFHGKPLEAFTLYRKMCTQGFSL 545
Y K + +EI ++E +I + R+ L + + E +L+ ++ G
Sbjct: 229 YLKGQFE--LGEEIWAKMVEKNVTIDIRTYNARLLGLAYEVRSKELLSLFEELQASGIKP 286
Query: 546 DSHGFSTLVNALTQSGNISKAKKVFMDALNCLCRATKC-YLPLIRCLAASGDVSSVNSVC 722
D + F+ ++ G + +A+ + + + R K + L+ + +GD S +C
Sbjct: 287 DVYSFNAMIRGSINEGKMDEAESWYKEIMKHGYRPDKATFALLLPAMCKAGDFESAIELC 346
Query: 723 MEMFRKRWLPNDETLEFVLGFLEKNDKGEQ 812
E F KR+L TL+ V+ L K K E+
Sbjct: 347 KETFSKRYLVGQATLQKVVDELVKGSKREE 376
>ref|NP_175985.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174230|sp|Q9LG23.1|PPR82_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g55890, mitochondrial; Flags: Precursor
gi|8778306|gb|AAF79315.1|AC002304_8 F14J16.14
[Arabidopsis thaliana] gi|18650654|gb|AAL75896.1|
At1g55890/F14J16_4 [Arabidopsis thaliana]
gi|53828645|gb|AAU94432.1| At1g55890 [Arabidopsis
thaliana] gi|332195194|gb|AEE33315.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 398
Score = 98.6 bits (244), Expect = 3e-18
Identities = 73/270 (27%), Positives = 130/270 (48%), Gaps = 3/270 (1%)
Frame = +3
Query: 12 EDLAARVITLYGRARCPEHAIRTYASLRTVGCVPSTRFFNALITALLYSGKPDIAKE-FM 188
E AAR+I+LYG+A E+A + + + C S FNAL++A S K D+ +E F
Sbjct: 109 EGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFN 168
Query: 189 DSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLISS 368
+ GKL++ P++ + IK LC + A++ L ++ + + PD+V +T+ L+SS
Sbjct: 169 ELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTL---LLSS 225
Query: 369 YTKNMLDNAKAQEIVDALLESCPDSEIHS-AIRVRWLCFHGKPLEAFTLYRKMCTQGFSL 545
Y K + +EI ++E +I + R+ L K E L+ ++ G
Sbjct: 226 YLKGQFE--LGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKP 283
Query: 546 DSHGFSTLVNALTQSGNISKAKKVFMDALNCLCRATKC-YLPLIRCLAASGDVSSVNSVC 722
D F+ ++ G + +A+ + + + R K + L+ + +GD S +
Sbjct: 284 DVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELF 343
Query: 723 MEMFRKRWLPNDETLEFVLGFLEKNDKGEQ 812
E F KR+L TL+ ++ L K K E+
Sbjct: 344 KETFSKRYLVGQTTLQQLVDELVKGSKREE 373
>ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g13150-like [Vitis vinifera]
Length = 379
Score = 97.8 bits (242), Expect = 5e-18
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 4/272 (1%)
Frame = +3
Query: 9 SEDLAARVITLYGRARCPEHAIRTYASLRTVGCVPSTRFFNALITALLYSGKPD-IAKEF 185
+E A R++TLYG+A EHA + + L + C + FNAL++ + S K D I F
Sbjct: 91 TEVFAVRLMTLYGKAGMFEHAHKLFDELPKLNCERTVVSFNALLSVCVNSKKFDKIDGFF 150
Query: 186 MDSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLIS 365
+ G L V P++ + + + C + + A+S L +M + + PD++ +T L++
Sbjct: 151 QELPGNLGVVPDVVSYNIIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNT----LLN 206
Query: 366 SYTKNMLDNAKAQEIVDALLES--CPDSEIHSAIRVRWLCFHGKPLEAFTLYRKMCTQGF 539
++ +N A ++I D + ++ P+ ++A ++R + + EA L +M T G
Sbjct: 207 AFYQNG-SYADGEKIWDLMKKNNVAPNVRSYNA-KLRGVISENRMSEAVELIDEMKTSGI 264
Query: 540 SLDSHGFSTLVNALTQSGNISKAKKVFMD-ALNCLCRATKCYLPLIRCLAASGDVSSVNS 716
D ++L+ +GN+ +AK+ + + A N L Y+ LI L GD
Sbjct: 265 KPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRATYMTLIPFLVEKGDFDMATE 324
Query: 717 VCMEMFRKRWLPNDETLEFVLGFLEKNDKGEQ 812
+C E+ +RWL L+ VL L K K E+
Sbjct: 325 LCKEVCSRRWLIEPALLQQVLEGLVKESKIEE 356
>emb|CBI41008.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 97.8 bits (242), Expect = 5e-18
Identities = 74/271 (27%), Positives = 133/271 (49%), Gaps = 4/271 (1%)
Frame = +3
Query: 12 EDLAARVITLYGRARCPEHAIRTYASLRTVGCVPSTRFFNALITALLYSGKPD-IAKEFM 188
E A R+I+LYG++ +HA + + + C S FNAL+ A ++S K D I F
Sbjct: 102 EGFAVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKIDGFFQ 161
Query: 189 DSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLISS 368
+ G L V P++ + + + C + + A+S L +M + + PD++ +T L+++
Sbjct: 162 ELPGNLGVVPDVVSYNIIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNT----LLNA 217
Query: 369 YTKNMLDNAKAQEIVDALLES--CPDSEIHSAIRVRWLCFHGKPLEAFTLYRKMCTQGFS 542
+ +N A ++I D + ++ P+ ++A ++R + + EA L +M T G
Sbjct: 218 FYQNG-SYADGEKIWDLMKKNNVAPNVRSYNA-KLRGVISENRMSEAVELIDEMKTSGIK 275
Query: 543 LDSHGFSTLVNALTQSGNISKAKKVFMD-ALNCLCRATKCYLPLIRCLAASGDVSSVNSV 719
D ++L+ +GN+ +AK+ + + A N L Y+ LI L GD +
Sbjct: 276 PDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRATYMTLIPFLVEKGDFDMATEL 335
Query: 720 CMEMFRKRWLPNDETLEFVLGFLEKNDKGEQ 812
C E+ +RWL L+ VL L K K E+
Sbjct: 336 CKEVCSRRWLIEPALLQQVLEGLVKESKIEE 366
>ref|XP_006392589.1| hypothetical protein EUTSA_v10011551mg [Eutrema salsugineum]
gi|557089167|gb|ESQ29875.1| hypothetical protein
EUTSA_v10011551mg [Eutrema salsugineum]
Length = 398
Score = 97.4 bits (241), Expect = 6e-18
Identities = 70/267 (26%), Positives = 127/267 (47%), Gaps = 3/267 (1%)
Frame = +3
Query: 12 EDLAARVITLYGRARCPEHAIRTYASLRTVGCVPSTRFFNALITALLYSGKPDIAKE-FM 188
E AAR+I+LYG+A E+A + + + C S R FNAL++A S K D+ ++ F
Sbjct: 109 EGFAARIISLYGKAGMFENAQKVFDEMPEKNCKRSVRSFNALLSAYGLSKKFDLVEQLFY 168
Query: 189 DSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLISS 368
D KL + P++ + IK LC ++ A++ L + + PD++ +T+ L+SS
Sbjct: 169 DLPDKLLIEPDIVSYNTLIKALCEKGSFSEAVALLDVIENEGLKPDIITFNTL---LLSS 225
Query: 369 YTKNMLDNAKAQEIVDALLESCPDSEIHS-AIRVRWLCFHGKPLEAFTLYRKMCTQGFSL 545
Y K + + +EI +++ +I + R+ L K + L+ +M
Sbjct: 226 YLKGQFE--QGEEIWAKMVQKNVARDIRTYNARLLGLANEAKSEDLVNLFEEMKASEIKP 283
Query: 546 DSHGFSTLVNALTQSGNISKAKKVFMDALNCLCRATKC-YLPLIRCLAASGDVSSVNSVC 722
D F+ ++ G + +AK + + + R K + L+ + +GD S +C
Sbjct: 284 DVFSFNAMIRGSINQGKMDEAKSWYREIVKHGYRPDKATFALLLPAMCKAGDFGSAMELC 343
Query: 723 MEMFRKRWLPNDETLEFVLGFLEKNDK 803
E F KR+L TL+ ++ L + K
Sbjct: 344 KEAFSKRYLVGQATLQQLVDELVRGSK 370
>ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449471723|ref|XP_004153390.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449530564|ref|XP_004172264.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
Length = 405
Score = 97.4 bits (241), Expect = 6e-18
Identities = 71/288 (24%), Positives = 131/288 (45%), Gaps = 7/288 (2%)
Frame = +3
Query: 9 SEDLAARVITLYGRARCPEHAIRTYASLRTVGCVPSTRFFNALITAL-LYSGKPDIAKEF 185
+E A I LYG+A +HAIRT+ + +G S + NAL+ A L ++ + +
Sbjct: 112 NERFACHAIVLYGQANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVY 171
Query: 186 MDSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLIS 365
M+ + P++ T IK + S + +M +D+ P+ T + L
Sbjct: 172 MEFPKIYGIEPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNAT---TFANWLAG 228
Query: 366 SYTKNMLDNAKAQEIVDALLESCPDSEIHSAI-----RVRWLCFHGKPLEAFTLYRKMCT 530
Y + ++ V+ +L + + R+R LC + EA L+ M +
Sbjct: 229 CYMEEKFED------VEKVLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLS 282
Query: 531 QGFSLDSHGFSTLVNALTQSGNISKAKKVFMDALNCLCRA-TKCYLPLIRCLAASGDVSS 707
+G +S + L++ + GN+ +AK +F +N C+ ++CY L L GD +
Sbjct: 283 RGMDPNSVTYCELIHGFCKEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYET 342
Query: 708 VNSVCMEMFRKRWLPNDETLEFVLGFLEKNDKGEQGLARRIKATIKSR 851
+C+E +K W+PN T++ ++ L K E+ A+++ IK R
Sbjct: 343 AFKICLESMKKGWVPNFSTMKSLVDGLVSISKVEE--AKQLIGQIKER 388
>ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Vitis vinifera]
Length = 379
Score = 97.4 bits (241), Expect = 6e-18
Identities = 74/272 (27%), Positives = 134/272 (49%), Gaps = 4/272 (1%)
Frame = +3
Query: 9 SEDLAARVITLYGRARCPEHAIRTYASLRTVGCVPSTRFFNALITALLYSGKPD-IAKEF 185
+E A R++TLYG A +HA + + L + C + FNAL++A + S K D I F
Sbjct: 91 TEVFAVRLMTLYGTAGMFDHAHKLFDELPKLNCERTVMSFNALLSACVNSKKFDKIDGFF 150
Query: 186 MDSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLIS 365
+ G L + P++ + + + C + + A+S L +M + + PD++ +T L++
Sbjct: 151 QELPGNLGIVPDVVSYNILVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNT----LLN 206
Query: 366 SYTKNMLDNAKAQEIVDALLES--CPDSEIHSAIRVRWLCFHGKPLEAFTLYRKMCTQGF 539
++ +N A ++I D + ++ P+ ++A ++R + + EA L +M T G
Sbjct: 207 AFYQNG-SYADGEKIWDLMKKNNVAPNVRSYNA-KLRGVISENRMSEAVELIDEMKTSGI 264
Query: 540 SLDSHGFSTLVNALTQSGNISKAKKVFMD-ALNCLCRATKCYLPLIRCLAASGDVSSVNS 716
D ++L+ +GN+ +AK+ + + A N L Y+ LI L GD
Sbjct: 265 KPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRATYMTLIPFLVEKGDFEMATE 324
Query: 717 VCMEMFRKRWLPNDETLEFVLGFLEKNDKGEQ 812
+C E+ +RWL L+ VL L K K E+
Sbjct: 325 LCKEVCSRRWLIEPALLQQVLEGLVKESKIEE 356
>ref|XP_004293582.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 378
Score = 97.1 bits (240), Expect = 8e-18
Identities = 70/269 (26%), Positives = 132/269 (49%), Gaps = 2/269 (0%)
Frame = +3
Query: 12 EDLAARVITLYGRARCPEHAIRTYASLRTVGCVPSTRFFNALITALLYSGKPDIAKE-FM 188
E A R+++LYG+A ++A + + + CV + FNAL+ A + S + D+A++ F
Sbjct: 90 EGFAVRILSLYGKAGMFDNAQKVFDEMPDRNCVRTVLSFNALMGACVNSKRFDMAEKIFK 149
Query: 189 DSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLISS 368
+ KL+V P++ + + IK C++ ++ A+ L KM ++ + PD++ +TI+D L
Sbjct: 150 EVPEKLSVEPDLVSYNILIKAFCKMGSFDSAVLVLEKMEKKGMKPDVITFNTILDCL--- 206
Query: 369 YTKNMLDNAKAQEIVDALLESCPDSEIHSAIRVRWLCFHGKPLEAFTLYRKMCTQGFSLD 548
Y +AK V PD ++A ++ L + E L +++ + G D
Sbjct: 207 YGNQRFSDAKKIWGVMVEKNVVPDIRSYNA-KLMGLALEKRSKEGAELVKELRSSGVEPD 265
Query: 549 SHGFSTLVNALTQSGNISKAKKVFMDALNCLCRATK-CYLPLIRCLAASGDVSSVNSVCM 725
F+ L+ GN+ +AK+ + + + C K + L+ GDV +C
Sbjct: 266 VFSFNALIKGFVGEGNLEEAKRWYGELVKSGCAPDKWTFEMLVPFSCEKGDVEYGFELCK 325
Query: 726 EMFRKRWLPNDETLEFVLGFLEKNDKGEQ 812
++F++R L + L+ V+ L K EQ
Sbjct: 326 DIFQRRRLASAAMLQPVVDGLVKASMIEQ 354
>emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]
Length = 340
Score = 96.3 bits (238), Expect = 1e-17
Identities = 74/272 (27%), Positives = 133/272 (48%), Gaps = 4/272 (1%)
Frame = +3
Query: 9 SEDLAARVITLYGRARCPEHAIRTYASLRTVGCVPSTRFFNALITALLYSGKPD-IAKEF 185
+E A R++TLYG+A EHA + + + C + FNAL++ + S K D I F
Sbjct: 52 TEVFAVRLMTLYGKAGMFEHAHKLFDEXPKLNCERTVVSFNALLSVCVXSKKFDKIDGFF 111
Query: 186 MDSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLIS 365
+ G L V P++ + + + C + + A+S L +M + + PD++ +T L++
Sbjct: 112 QELPGNLGVVPDVVSYNIIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNT----LLN 167
Query: 366 SYTKNMLDNAKAQEIVDALLES--CPDSEIHSAIRVRWLCFHGKPLEAFTLYRKMCTQGF 539
++ +N A ++I D + ++ P+ ++A ++R + + EA L +M T G
Sbjct: 168 AFYQNG-SYADGEKIWDLMKKNNVAPNVRSYNA-KLRGVISENRMSEAVELIDEMKTSGI 225
Query: 540 SLDSHGFSTLVNALTQSGNISKAKKVFMD-ALNCLCRATKCYLPLIRCLAASGDVSSVNS 716
D ++L+ +GN+ +AK+ + + A N L Y+ LI L GD
Sbjct: 226 KPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRATYMTLIPFLVEKGDFDMATE 285
Query: 717 VCMEMFRKRWLPNDETLEFVLGFLEKNDKGEQ 812
+C E+ +RWL L+ VL L K K E+
Sbjct: 286 LCKEVCSRRWLIEPALLQQVLEGLVKESKIEE 317
>ref|XP_002891858.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297337700|gb|EFH68117.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 395
Score = 95.5 bits (236), Expect = 2e-17
Identities = 72/270 (26%), Positives = 129/270 (47%), Gaps = 3/270 (1%)
Frame = +3
Query: 12 EDLAARVITLYGRARCPEHAIRTYASLRTVGCVPSTRFFNALITALLYSGKPDIAKE-FM 188
E AAR+I+LYG+A E+A + + + C S FNAL++A S K D+ ++ F
Sbjct: 106 EGFAARIISLYGKAGMFENAQKVFDEMPDRNCKRSVLSFNALLSAYGLSKKFDVVEQLFN 165
Query: 189 DSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLISS 368
+ GKL++ P++ + IK LC + A++ L + + + PD+V +T+ L+SS
Sbjct: 166 ELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEFENKGLKPDIVTFNTL---LLSS 222
Query: 369 YTKNMLDNAKAQEIVDALLESCPDSEIHS-AIRVRWLCFHGKPLEAFTLYRKMCTQGFSL 545
Y K + +EI L+E +I + R+ L K E +L+ ++ G
Sbjct: 223 YLKGQFE--LGEEIWAKLVEKNVPIDIRTYNARLLGLASEVKSKELVSLFEELKASGIKP 280
Query: 546 DSHGFSTLVNALTQSGNISKAKKVFMDALNCLCRATKC-YLPLIRCLAASGDVSSVNSVC 722
D F+ ++ G + +A+ + + + R K + L+ + +GD +
Sbjct: 281 DVFSFNAMIRGSINQGKMDEAESWYKEIVKHGYRPDKATFALLLPAMCKAGDFEFAIELF 340
Query: 723 MEMFRKRWLPNDETLEFVLGFLEKNDKGEQ 812
E F KR+L TL+ ++ L K K E+
Sbjct: 341 KETFSKRYLVGQTTLQQLVDELVKGSKREE 370
>ref|XP_006847893.1| hypothetical protein AMTR_s00029p00104950 [Amborella trichopoda]
gi|548851198|gb|ERN09474.1| hypothetical protein
AMTR_s00029p00104950 [Amborella trichopoda]
Length = 405
Score = 94.4 bits (233), Expect = 5e-17
Identities = 83/287 (28%), Positives = 139/287 (48%), Gaps = 6/287 (2%)
Frame = +3
Query: 12 EDLAARVITLYGRARCPEHAIRTYASLRTVGCVPSTRFFNALITALLYSGKPD-IAKEFM 188
E + VI YGRA+ + AI+T+ + +GC + FN L+TAL S K D + K F
Sbjct: 100 ERFLSDVILAYGRAKMADQAIKTFYQMDELGCPRTVSSFNVLLTALKDSEKFDRVTKLFD 159
Query: 189 DSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLISS 368
+ K + P+ + +F+K+LC + A L +M E+ I + + T+ID
Sbjct: 160 EIPTKFGISPDHFSYSIFLKSLCDSGSPDKAYEKLKEMNEKGITVTNISYTTLID---GF 216
Query: 369 YTKNMLDNAKAQEIVDALLES-CP-DSEIHSAIRVRWLCFHGKPLEAFTLYRKMCTQGFS 542
Y K + +A++I D ++++ C D+ ++A ++ ++ HGKP EA L +M
Sbjct: 217 YKKKKPE--EAEKIWDEMVKNGCSLDTPAYNA-KLIYIANHGKPEEALKLLGEMEASNVK 273
Query: 543 LDSHGFSTLVNALTQSGNISKAKKVF--MDALNCLCRATK-CYLPLIRCLAASGDVSSVN 713
D+ ++ L+ ++G +AKKV+ M + + C + Y IR L D
Sbjct: 274 PDALSYNFLLMCYLKNGEKEEAKKVYEEMASNSKGCYPNQMTYRIFIRYLVQKKDYDLAL 333
Query: 714 SVCMEMFRKRWLPNDETLEFVLGFLEKNDKGEQGLARRIKATIKSRH 854
VC E R+R P +T+ ++ L KN K E+ K IK H
Sbjct: 334 EVCKESIRRRKAPKFQTVSDLIKGLVKNSKEEEA-----KQVIKMVH 375
>ref|XP_006858124.1| hypothetical protein AMTR_s00062p00111890 [Amborella trichopoda]
gi|548862227|gb|ERN19591.1| hypothetical protein
AMTR_s00062p00111890 [Amborella trichopoda]
Length = 398
Score = 93.2 bits (230), Expect = 1e-16
Identities = 66/270 (24%), Positives = 127/270 (47%), Gaps = 3/270 (1%)
Frame = +3
Query: 9 SEDLAARVITLYGRARCPEHAIRTYASLRTVGCVPSTRFFNALITALLYSGK-PDIAKEF 185
+E + I LYG+A + AI+T+ + + + + NAL+++ + + K ++A+ F
Sbjct: 104 NERFMVKAILLYGKAGMLDQAIQTFKQMGDLNLTRTVKSLNALLSSCIIAKKYKEVARLF 163
Query: 186 MDSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLIS 365
+ + ++ P+ T IK LC + A++ L +M ++ P+ + + + L
Sbjct: 164 DEYSKDYSIKPDTVTYNTMIKALCESDSSDSALALLKEMGKKGCKPNAISYGNL---LAG 220
Query: 366 SYTKNMLDNAKAQEIVDALLES-CPDSEIHSAIRVRWLCFHGKPLEAFTLYRKMCTQGFS 542
Y + D K ++D + + C +R++ LC K EA L R M ++G
Sbjct: 221 FYREEKFD--KVGVVLDLMERNGCHPGVTTYNVRIQSLCKLKKSSEAMALIRGMVSKGVR 278
Query: 543 LDSHGFSTLVNALTQSGNISKAKKVFMDALNCLC-RATKCYLPLIRCLAASGDVSSVNSV 719
++ F L+ + GN+ +AKKVF + + C + CY L+ L GD +
Sbjct: 279 PNTTTFYHLIYGFCREGNLEEAKKVFSEMKSRGCVPDSNCYFALLYYLCEGGDYEPAFKL 338
Query: 720 CMEMFRKRWLPNDETLEFVLGFLEKNDKGE 809
C E K W+P+ + ++ ++ L K K E
Sbjct: 339 CRESMEKDWVPSFKVMKSLVNGLVKLSKIE 368
>ref|NP_566445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273726|sp|Q9LK57.1|PP226_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g13160, mitochondrial; Flags: Precursor
gi|10172603|dbj|BAB01407.1| unnamed protein product
[Arabidopsis thaliana] gi|22531265|gb|AAM97136.1|
expressed protein [Arabidopsis thaliana]
gi|27311983|gb|AAO00957.1| expressed protein
[Arabidopsis thaliana] gi|332641782|gb|AEE75303.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 394
Score = 93.2 bits (230), Expect = 1e-16
Identities = 70/270 (25%), Positives = 126/270 (46%), Gaps = 3/270 (1%)
Frame = +3
Query: 12 EDLAARVITLYGRARCPEHAIRTYASLRTVGCVPSTRFFNALITALLYSGKPDIAKE-FM 188
E AR+I LYGR E+A + + + C + FNAL+ A + S K D+ + F
Sbjct: 106 EGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFK 165
Query: 189 DSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLISS 368
+ GKL++ P++ + IK LC ++ A++ + ++ + + PD H T L S
Sbjct: 166 ELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPD---HITFNILLHES 222
Query: 369 YTKNMLDNAKAQEIVDALLESCPDSEIHS-AIRVRWLCFHGKPLEAFTLYRKMCTQGFSL 545
YTK + + ++I ++E +I S R+ L K E +L+ K+
Sbjct: 223 YTKGKFE--EGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKP 280
Query: 546 DSHGFSTLVNALTQSGNISKAKKVFMDALNCLCRATK-CYLPLIRCLAASGDVSSVNSVC 722
D F+ ++ G + +A + + CR K + L+ + +GD+ S +C
Sbjct: 281 DVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELC 340
Query: 723 MEMFRKRWLPNDETLEFVLGFLEKNDKGEQ 812
E+F KR L ++ L+ V+ L K K ++
Sbjct: 341 KEIFAKRLLVDEAVLQEVVDALVKGSKQDE 370
>gb|AAM67043.1| unknown [Arabidopsis thaliana]
Length = 394
Score = 92.8 bits (229), Expect = 2e-16
Identities = 70/270 (25%), Positives = 126/270 (46%), Gaps = 3/270 (1%)
Frame = +3
Query: 12 EDLAARVITLYGRARCPEHAIRTYASLRTVGCVPSTRFFNALITALLYSGKPDIAKE-FM 188
E AR+I LYGR E+A + + + C + FNAL+ A + S K D+ + F
Sbjct: 106 EGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTVLSFNALLNACVNSKKFDLVEGIFE 165
Query: 189 DSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLISS 368
+ GKL++ P++ + IK LC ++ A++ + ++ + + PD H T L S
Sbjct: 166 ELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPD---HITFNILLHES 222
Query: 369 YTKNMLDNAKAQEIVDALLESCPDSEIHS-AIRVRWLCFHGKPLEAFTLYRKMCTQGFSL 545
YTK + + ++I ++E +I S R+ L K E +L+ K+
Sbjct: 223 YTKGKFE--EGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKP 280
Query: 546 DSHGFSTLVNALTQSGNISKAKKVFMDALNCLCRATK-CYLPLIRCLAASGDVSSVNSVC 722
D F+ ++ G + +A + + CR K + L+ + +GD+ S +C
Sbjct: 281 DVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELC 340
Query: 723 MEMFRKRWLPNDETLEFVLGFLEKNDKGEQ 812
E+F KR L ++ L+ V+ L K K ++
Sbjct: 341 KEIFAKRLLVDEAVLQEVVDALVKGSKQDE 370
>ref|XP_002518584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542429|gb|EEF43971.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 377
Score = 92.4 bits (228), Expect = 2e-16
Identities = 68/270 (25%), Positives = 128/270 (47%), Gaps = 2/270 (0%)
Frame = +3
Query: 9 SEDLAARVITLYGRARCPEHAIRTYASLRTVGCVPSTRFFNALITALLYSGKPDIAKEFM 188
+E R+I+LYG+A +HA R + + + C + R FNAL++A + SGK D + F+
Sbjct: 89 NEQFTIRLISLYGKAGMLDHAHRLFDEMPDLKCTRTVRSFNALLSACIDSGKFDKVQGFL 148
Query: 189 -DSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLIS 365
D KL + P++ + + IK C + N + L +M +R I PD++ +T+++
Sbjct: 149 RDFPVKLGITPDVVSFNIVIKGYCEIGNLDSGVLVLCEMEKRGIEPDLITFNTLLNGFYG 208
Query: 366 SYTKNMLDNAKAQEIVDALLESCPDSEIHSAIRVRWLCFHGKPLEAFTLYRKMCTQGFSL 545
+ +D K ++++ P+ +++ R+R L + +EA L +M +G
Sbjct: 209 N--GRFVDGEKIWTLMES-KNVVPNVRSYNS-RLRGLELENRVMEAVELLGEMENKGIRP 264
Query: 546 DSHGFSTLVNALTQSGNISKAKKVFMDAL-NCLCRATKCYLPLIRCLAASGDVSSVNSVC 722
D ++ ++ L N+ + K + N Y+ LI L GD+ +C
Sbjct: 265 DVMSYNAVIKGLCNDENVEEVKNWYRKLKENGRMPDRVTYMTLIPYLRQKGDLDGAVELC 324
Query: 723 MEMFRKRWLPNDETLEFVLGFLEKNDKGEQ 812
+E+ K L N + V+ L K + E+
Sbjct: 325 IEIMNKGLLVNATLFQHVVDELVKLSRVEE 354
>gb|ESW31215.1| hypothetical protein PHAVU_002G219400g [Phaseolus vulgaris]
Length = 405
Score = 92.0 bits (227), Expect = 3e-16
Identities = 72/282 (25%), Positives = 129/282 (45%), Gaps = 9/282 (3%)
Frame = +3
Query: 9 SEDLAARVITLYGRARCPEHAIRTYASLRTVGCVPSTRFFNALITALLYSGKPDIAKE-F 185
+E ++R+I+LYG++ +HA + + + C S NAL+ A L+S K D+ +E F
Sbjct: 116 NEGFSSRLISLYGKSGMAKHARKVFDEMPQRKCDRSVLSLNALLAAYLHSKKYDVVEELF 175
Query: 186 MDSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLIS 365
+L++ P++ + IK C ++ A+S + +M E+ + PD + +T++D L
Sbjct: 176 RALPTQLSIEPDLVSYNTLIKAFCEKGSFDSALSVVKEMEEKGVDPDSITFNTLLDGL-- 233
Query: 366 SYTKNMLDNAKAQEIVDALLESCPDSEIHSAIRVRWLCFHGKPLEAFTLYRKMCTQGFSL 545
Y+K ++ + PD + + R+ L K EA L+R+M G
Sbjct: 234 -YSKGCFEDGEKVWGQMGAKNVAPDVRSYCS-RLVGLAGEKKAAEAVELFREMEKVGVKP 291
Query: 546 DSHGFSTLVNALTQSGNISKAKKVFMDALNCLCRATK-CYLPLIRCLAASGDVSSVNSVC 722
+ + ++ GN+ +AKK F + N K Y L+ L GD+ + +C
Sbjct: 292 NIFCINAVIKGFVNEGNLDEAKKWFGEIANSDDDPHKNTYSTLVPFLCEKGDLKTAIEMC 351
Query: 723 MEMFRKRWLPNDETLEFVLGFL-------EKNDKGEQGLARR 827
E+F R + L+ V+ L E + GE G R
Sbjct: 352 KEIFNIRCRVDASLLQLVVDKLVSEGMISEAKEIGEIGKTNR 393
>ref|XP_002518506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542351|gb|EEF43893.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 397
Score = 91.3 bits (225), Expect = 4e-16
Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 8/289 (2%)
Frame = +3
Query: 9 SEDLAARVITLYGRARCPEHAIRTYASLRT----VGCVPSTRFFNALITAL-LYSGKPDI 173
SE AA I L+G+A +HA+RT+ T +G S + FNAL+ A L ++
Sbjct: 99 SERFAAHAIVLFGQAAMVDHAVRTFKEYHTDVIGLGNNGSVKVFNALLFACYLAKDYSEV 158
Query: 174 AKEFMDSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIID 353
+ F++ N+ PN+ + IK+ C + S L +M + + P+ T
Sbjct: 159 KRVFLEFPKNYNIEPNLDSYNTVIKSFCDSESSSSGFSVLAEMDRKRLKPNA----TTFG 214
Query: 354 HLISSYTKNML--DNAKAQEIVDALLESCPDSEIHSAIRVRWLCFHGKPLEAFTLYRKMC 527
HL++ + K D K E++ P ++ IR++ LC K EA L M
Sbjct: 215 HLLAGFYKEEKYEDVGKVLEMMKDKYGIRPGVSTYN-IRIQSLCKLKKSAEAKALLDGML 273
Query: 528 TQGFSLDSHGFSTLVNALTQSGNISKAKKVFMDALNCLCRA-TKCYLPLIRCLAASGDVS 704
++ +S ++ L++ G++ K++F D +N + + CY L+ L D
Sbjct: 274 SRQMKPNSVTYAHLIHGFCNEGDLEGGKRLFKDMVNRGYQPDSACYFTLLHYLCKGQDFE 333
Query: 705 SVNSVCMEMFRKRWLPNDETLEFVLGFLEKNDKGEQGLARRIKATIKSR 851
+ +C E K W+PN T++ ++ L K ++ A+ + A IK +
Sbjct: 334 TALRICKESIGKDWVPNIATMKSLVNGLAGIGKVDE--AKELIAKIKEK 380
>gb|EOY20533.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 400
Score = 90.9 bits (224), Expect = 6e-16
Identities = 69/283 (24%), Positives = 126/283 (44%), Gaps = 3/283 (1%)
Frame = +3
Query: 12 EDLAARVITLYGRARCPEHAIRTYASLRTVGCVPSTRFFNALITALLYSGKPDIAKEFM- 188
E R+I LYG+A +HA+ T+ + GC + + FNA + L+ + + F+
Sbjct: 105 EGFIMRIIMLYGKAGMIKHALNTFYDMHLYGCERTVKSFNAALKVLIQTHDIRAIEAFLS 164
Query: 189 DSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLISS 368
D K NV + + + +K C + A + +M + I PD++ + T+I +
Sbjct: 165 DVPQKFNVELDTYSVNIVVKAFCEMDFLERAYLVMVEMEKLGIRPDVITYTTLIS---TF 221
Query: 369 YTKNMLDNAKAQEIVDALLESCPDSEIHSAIRVRWLCFHGKPLEAFTLYRKMCTQGFSLD 548
Y KN + + + + C + +R+++L + +A L R M G D
Sbjct: 222 YQKNRWEIGNGLWNL-MVYKGCKPNLTTFNVRIQYLVNRRRAWQANDLMRLMRKIGIVPD 280
Query: 549 SHGFSTLVNALTQSGNISKAKKVFMDALNC--LCRATKCYLPLIRCLAASGDVSSVNSVC 722
++ ++ +G + AK+V+ C K Y +I L GD + ++C
Sbjct: 281 EVTYNLVIKGFCLAGYLEMAKRVYSSLEFCREYRPNIKIYQTMIHYLCKGGDYNLAYTMC 340
Query: 723 MEMFRKRWLPNDETLEFVLGFLEKNDKGEQGLARRIKATIKSR 851
+ RK W N +T+ +L L KN G+ G A+ I ++SR
Sbjct: 341 KDCMRKNWFLNVDTIRSLLEGLIKN--GQLGKAKMIMKLVRSR 381
>ref|XP_006299007.1| hypothetical protein CARUB_v10015134mg [Capsella rubella]
gi|482567716|gb|EOA31905.1| hypothetical protein
CARUB_v10015134mg [Capsella rubella]
Length = 394
Score = 90.9 bits (224), Expect = 6e-16
Identities = 69/270 (25%), Positives = 125/270 (46%), Gaps = 3/270 (1%)
Frame = +3
Query: 12 EDLAARVITLYGRARCPEHAIRTYASLRTVGCVPSTRFFNALITALLYSGKPDIAKE-FM 188
E AR+I LYGR E+A + + + C + FNAL+ A + S K D+ + F
Sbjct: 106 EGFVARIINLYGRVGMFENAQKVFDEMAERNCKRTVLSFNALLNACVNSKKFDLVEGLFK 165
Query: 189 DSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLISS 368
+ GKL++ P++ + IK LC ++ A++ + ++ + + PD + + + L S
Sbjct: 166 ELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDYITFNIL---LHES 222
Query: 369 YTKNMLDNAKAQEIVDALLESCPDSEIHS-AIRVRWLCFHGKPLEAFTLYRKMCTQGFSL 545
YTK + ++I +LE +I S R+ L K E TL+ ++ G
Sbjct: 223 YTKGKFQ--EGEKIWARMLEKNVKRDIRSYNARLLGLATEMKSNEMITLFDELKVNGIKP 280
Query: 546 DSHGFSTLVNALTQSGNISKAKKVFMDALNCLCRATK-CYLPLIRCLAASGDVSSVNSVC 722
D F+ ++ G + +A + + R K + L+ + +GD+ S +C
Sbjct: 281 DVFTFTAMIKGCVGEGKLDEAITWYKEIEKNGLRPMKFIFTSLLPAMCKAGDIESAYELC 340
Query: 723 MEMFRKRWLPNDETLEFVLGFLEKNDKGEQ 812
E+F KR L + L+ V+ L K K ++
Sbjct: 341 KEIFSKRLLVDGAILQEVVDELVKGSKQDE 370
>ref|XP_006847894.1| hypothetical protein AMTR_s00029p00105510 [Amborella trichopoda]
gi|548851199|gb|ERN09475.1| hypothetical protein
AMTR_s00029p00105510 [Amborella trichopoda]
Length = 404
Score = 90.5 bits (223), Expect = 7e-16
Identities = 75/271 (27%), Positives = 135/271 (49%), Gaps = 4/271 (1%)
Frame = +3
Query: 12 EDLAARVITLYGRARCPEHAIRTYASLRTVGCVPSTRFFNALITALLYSGKPD-IAKEFM 188
E + VI YGRA+ P+ AI+T+ + +GC + FNAL+TAL + K D I + F
Sbjct: 96 EKFLSDVILAYGRAKMPDQAIKTFYQMDELGCPRTVGSFNALLTALKDAEKFDRIIELFD 155
Query: 189 DSTGKLNVHPNMTTCGLFIKTLCRLHNYRGAISFLTKMRERDICPDMVCHDTIIDHLISS 368
+ K + + + + +K+LC + A L +M+E+ I + + T+ID
Sbjct: 156 EIPSKFGITSSSVSYSIVLKSLCDSGSPDKAYEKLKEMKEKGIKVTNISYTTLID---GF 212
Query: 369 YTKNMLDNAKAQEIVDALLES-CP-DSEIHSAIRVRWLCFHGKPLEAFTLYRKMCTQGFS 542
Y K + +A++I D ++++ C D+ ++A ++ ++ HGKP EA L +M
Sbjct: 213 YKKKKPE--EAEKIWDEMVKNGCSLDTPAYNA-KLIYIANHGKPEEALKLLEEMGASNVK 269
Query: 543 LDSHGFSTLVNALTQSGNISKAKKVFMDALNCLCRATK-CYLPLIRCLAASGDVSSVNSV 719
D+ ++ L+ ++G +AKKV+ + C + Y +R L D V
Sbjct: 270 PDALSYNFLLMCYLKNGKKEEAKKVYEEMGRKGCYPDQVTYRIFMRYLVQKNDYDLGLEV 329
Query: 720 CMEMFRKRWLPNDETLEFVLGFLEKNDKGEQ 812
C + R+R +PN + + ++ L KN K E+
Sbjct: 330 CKKCVRRRKVPNFQIVSNLITGLVKNLKEEE 360