BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00025446
         (453 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001755844.1| predicted protein [Physcomitrella patens] gi...   203   2e-50
ref|XP_002508452.1| predicted protein [Micromonas sp. RCC299] gi...   199   4e-49
ref|XP_001416013.1| predicted protein [Ostreococcus lucimarinus ...   199   4e-49
ref|XP_005651194.1| DNA-directed RNA polymerase III, subunit 2 [...   198   7e-49
ref|XP_003062804.1| predicted protein [Micromonas pusilla CCMP15...   198   7e-49
ref|XP_002977127.1| hypothetical protein SELMODRAFT_443461 [Sela...   196   3e-48
ref|XP_002992124.1| hypothetical protein SELMODRAFT_430375 [Sela...   195   4e-48
ref|XP_003074664.1| RNA polymerase III subunit RPC2 (ISS) [Ostre...   194   8e-48
ref|XP_002955802.1| hypothetical protein VOLCADRAFT_66175 [Volvo...   181   9e-44
ref|XP_001693928.1| DNA-directed RNA polymerase III, subunit 2 [...   179   3e-43
ref|XP_006850351.1| hypothetical protein AMTR_s00020p00247890 [A...   178   7e-43
ref|XP_002598730.1| hypothetical protein BRAFLDRAFT_282817 [Bran...   174   1e-41
ref|XP_005844337.1| hypothetical protein CHLNCDRAFT_56318 [Chlor...   173   2e-41
gb|EKC20822.1| DNA-directed RNA polymerase III subunit RPC2 [Cra...   172   3e-41
gb|EFX82130.1| hypothetical protein DAPPUDRAFT_316708 [Daphnia p...   172   5e-41
ref|XP_004070128.1| PREDICTED: DNA-directed RNA polymerase III s...   171   9e-41
ref|XP_005990892.1| PREDICTED: DNA-directed RNA polymerase III s...   170   2e-40
gb|ELT94631.1| hypothetical protein CAPTEDRAFT_178602 [Capitella...   170   2e-40
ref|NP_001121521.1| polymerase (RNA) III (DNA directed) polypept...   170   2e-40
ref|XP_006789593.1| PREDICTED: DNA-directed RNA polymerase III s...   169   3e-40

>ref|XP_001755844.1| predicted protein [Physcomitrella patens]
           gi|162693163|gb|EDQ79517.1| predicted protein
           [Physcomitrella patens]
          Length = 1135

 Score =  203 bits (517), Expect = 2e-50
 Identities = 100/145 (68%), Positives = 118/145 (81%)
 Frame = +2

Query: 17  YENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVIS 196
           + ++  L APVKTAVDKFQLLP+FLKVRGLVKQHIDSFN+F+N EIKKIIHA+ NEKV S
Sbjct: 9   HSHKEGLEAPVKTAVDKFQLLPSFLKVRGLVKQHIDSFNYFINCEIKKIIHAQGNEKVTS 68

Query: 197 ENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVR 376
           + + NFYLKYLDI V  PC+E+D ++   TP QCRLRDMTY+API VDVEYTRG E+V  
Sbjct: 69  DVDANFYLKYLDIFVGEPCVEQDYIYEPITPQQCRLRDMTYSAPISVDVEYTRGKEVV-- 126

Query: 377 KGKGAITIGRLPIMLRSCQCILTGK 451
              G+I IGR+PIMLRS +CIL GK
Sbjct: 127 ---GSINIGRMPIMLRSSRCILAGK 148


>ref|XP_002508452.1| predicted protein [Micromonas sp. RCC299]
           gi|226523729|gb|ACO69710.1| predicted protein
           [Micromonas sp. RCC299]
          Length = 1159

 Score =  199 bits (505), Expect = 4e-49
 Identities = 97/142 (68%), Positives = 115/142 (80%), Gaps = 3/142 (2%)
 Frame = +2

Query: 35  LAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNF 214
           L AP+KT  DKF+LLPAFLKVRGLV+QHIDSFN+ +N EIKKII AKANEKV  + +PNF
Sbjct: 30  LNAPIKTLKDKFELLPAFLKVRGLVRQHIDSFNYLINEEIKKIIAAKANEKVTCDTDPNF 89

Query: 215 YLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVV---RKGK 385
           YLKY +I+V +P +EED +  E TP QCRLRDMTYAAP+ VDVEYTRG EIV    + G 
Sbjct: 90  YLKYTNIQVGKPSVEEDFIVEEITPQQCRLRDMTYAAPVTVDVEYTRGKEIVTNTSKNGV 149

Query: 386 GAITIGRLPIMLRSCQCILTGK 451
           G +TIGR+P+MLRS +CILTGK
Sbjct: 150 GGVTIGRIPLMLRSSRCILTGK 171


>ref|XP_001416013.1| predicted protein [Ostreococcus lucimarinus CCE9901]
           gi|144576236|gb|ABO94305.1| predicted protein
           [Ostreococcus lucimarinus CCE9901]
          Length = 1146

 Score =  199 bits (505), Expect = 4e-49
 Identities = 96/142 (67%), Positives = 115/142 (80%), Gaps = 3/142 (2%)
 Frame = +2

Query: 35  LAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNF 214
           + AP+ T  DK++LLPAFLKVRGLV+QHIDSFN+ VN EIKKIIHAKANE+V  +++PNF
Sbjct: 11  ITAPIATLEDKYELLPAFLKVRGLVRQHIDSFNYLVNEEIKKIIHAKANERVTCDSDPNF 70

Query: 215 YLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGK--- 385
           YLKY +I V RP +EED +  E TP QCRLRDMTYAAPI VDVEYTRG EIV R+ K   
Sbjct: 71  YLKYTNIHVGRPSVEEDYVVEEITPQQCRLRDMTYAAPITVDVEYTRGKEIVTRQAKNGV 130

Query: 386 GAITIGRLPIMLRSCQCILTGK 451
           G + IGR+P+MLRS +C+LTGK
Sbjct: 131 GGVVIGRIPLMLRSSRCVLTGK 152


>ref|XP_005651194.1| DNA-directed RNA polymerase III, subunit 2 [Coccomyxa
           subellipsoidea C-169] gi|384253175|gb|EIE26650.1|
           DNA-directed RNA polymerase III, subunit 2 [Coccomyxa
           subellipsoidea C-169]
          Length = 1170

 Score =  198 bits (503), Expect = 7e-49
 Identities = 96/142 (67%), Positives = 112/142 (78%), Gaps = 3/142 (2%)
 Frame = +2

Query: 35  LAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNF 214
           L  P+K   DK++LLPAFLKVRGLVKQHIDSFN+F+N EIKKI+HAK NEKV  + +PNF
Sbjct: 32  LTHPIKEVADKYELLPAFLKVRGLVKQHIDSFNYFINQEIKKIVHAKGNEKVTCDTDPNF 91

Query: 215 YLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGK--- 385
           + KY DI V RP +EED +    TP  CRLRDMTYAAPI VDVEYTRG EIVVRKGK   
Sbjct: 92  FFKYTDIFVGRPQVEEDYITTGITPQACRLRDMTYAAPISVDVEYTRGKEIVVRKGKNGV 151

Query: 386 GAITIGRLPIMLRSCQCILTGK 451
           GA+ IGR+P+MLRS +C+L GK
Sbjct: 152 GAVVIGRMPLMLRSDRCVLKGK 173


>ref|XP_003062804.1| predicted protein [Micromonas pusilla CCMP1545]
           gi|226455440|gb|EEH52743.1| predicted protein
           [Micromonas pusilla CCMP1545]
          Length = 1197

 Score =  198 bits (503), Expect = 7e-49
 Identities = 95/143 (66%), Positives = 115/143 (80%), Gaps = 4/143 (2%)
 Frame = +2

Query: 35  LAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNF 214
           LAAPV T  DKF+LLPAFLKVRGLV+QHIDSFN+ +N EI+KII AKANE+V  + +P+F
Sbjct: 64  LAAPVNTLEDKFELLPAFLKVRGLVRQHIDSFNYLINEEIRKIIRAKANERVTCDTDPSF 123

Query: 215 YLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRK----G 382
           YL+Y +I V +PC+EED +  + TP QCRLRDMTYAAP+ VD EYTRG EIV RK    G
Sbjct: 124 YLRYTNIHVGKPCVEEDYIVEDITPQQCRLRDMTYAAPVTVDAEYTRGKEIVTRKTNEQG 183

Query: 383 KGAITIGRLPIMLRSCQCILTGK 451
            G ITIGR+P+MLRS +C+LTGK
Sbjct: 184 VGGITIGRIPLMLRSSRCVLTGK 206


>ref|XP_002977127.1| hypothetical protein SELMODRAFT_443461 [Selaginella moellendorffii]
           gi|300155103|gb|EFJ21736.1| hypothetical protein
           SELMODRAFT_443461 [Selaginella moellendorffii]
          Length = 1386

 Score =  196 bits (497), Expect = 3e-48
 Identities = 100/157 (63%), Positives = 118/157 (75%), Gaps = 18/157 (11%)
 Frame = +2

Query: 35  LAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNF 214
           L APVKTAVDKFQLLPAF KVRGLVKQH+DS+N+FVN EIKKIIHAK NEK+ S+ +PNF
Sbjct: 250 LDAPVKTAVDKFQLLPAFHKVRGLVKQHLDSYNYFVNCEIKKIIHAKGNEKITSDVDPNF 309

Query: 215 YLKY---------------LDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEY 349
           Y+KY               LDI V  P +E+D +  + TP QCRLRDMTY+API VD+EY
Sbjct: 310 YIKYACDTFQYFTNILFRFLDIFVGTPSIEQDYIRQDITPQQCRLRDMTYSAPISVDIEY 369

Query: 350 TRGNEIVVRKGK---GAITIGRLPIMLRSCQCILTGK 451
           TRG +I+ RKGK   GA  IGR+P+MLRS +CILTGK
Sbjct: 370 TRGKDIITRKGKDGQGAQVIGRMPVMLRSSRCILTGK 406


>ref|XP_002992124.1| hypothetical protein SELMODRAFT_430375 [Selaginella moellendorffii]
           gi|300140050|gb|EFJ06779.1| hypothetical protein
           SELMODRAFT_430375 [Selaginella moellendorffii]
          Length = 1440

 Score =  195 bits (496), Expect = 4e-48
 Identities = 100/158 (63%), Positives = 118/158 (74%), Gaps = 19/158 (12%)
 Frame = +2

Query: 35  LAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNF 214
           L APVKTAVDKFQLLPAF KVRGLVKQH+DS+N+FVN EIKKIIHAK NEK+ S+ +PNF
Sbjct: 310 LDAPVKTAVDKFQLLPAFHKVRGLVKQHLDSYNYFVNCEIKKIIHAKGNEKITSDVDPNF 369

Query: 215 YLKY----------------LDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVE 346
           Y+KY                LDI V  P +E+D +  + TP QCRLRDMTY+API VD+E
Sbjct: 370 YIKYACDTFFQYFTNILFRFLDIFVGTPSIEQDYIRQDITPQQCRLRDMTYSAPISVDIE 429

Query: 347 YTRGNEIVVRKGK---GAITIGRLPIMLRSCQCILTGK 451
           YTRG +I+ RKGK   GA  IGR+P+MLRS +CILTGK
Sbjct: 430 YTRGKDIITRKGKDGQGAQVIGRMPVMLRSSRCILTGK 467


>ref|XP_003074664.1| RNA polymerase III subunit RPC2 (ISS) [Ostreococcus tauri]
           gi|116000835|emb|CAL50515.1| RNA polymerase III subunit
           RPC2 (ISS) [Ostreococcus tauri]
          Length = 2569

 Score =  194 bits (494), Expect = 8e-48
 Identities = 95/142 (66%), Positives = 114/142 (80%), Gaps = 3/142 (2%)
 Frame = +2

Query: 35  LAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNF 214
           + +P+ T  DKF+LLPAFLKVRGLV+QHIDSFN+ VN EIKKI+ AKANE+V  +++PNF
Sbjct: 39  VTSPIGTLEDKFELLPAFLKVRGLVRQHIDSFNYLVNEEIKKIVRAKANERVTCDSDPNF 98

Query: 215 YLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRK---GK 385
           YLKY +I V RP +EED +  E TP QCRLRDMTYAAPI VDVEYTRG EIV R+   G 
Sbjct: 99  YLKYTNIHVGRPSVEEDYVVEEITPQQCRLRDMTYAAPITVDVEYTRGKEIVTRQQKNGV 158

Query: 386 GAITIGRLPIMLRSCQCILTGK 451
           G I IGR+P+MLRS +C+LTGK
Sbjct: 159 GGIVIGRIPLMLRSSRCVLTGK 180


>ref|XP_002955802.1| hypothetical protein VOLCADRAFT_66175 [Volvox carteri f.
           nagariensis] gi|300258995|gb|EFJ43227.1| hypothetical
           protein VOLCADRAFT_66175 [Volvox carteri f. nagariensis]
          Length = 1154

 Score =  181 bits (459), Expect = 9e-44
 Identities = 89/151 (58%), Positives = 113/151 (74%), Gaps = 3/151 (1%)
 Frame = +2

Query: 8   EVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEK 187
           E  Y +   L  P+K   DKF LLPAFLKVRGLVKQH+DSFNF +N E++KI+   ANEK
Sbjct: 18  EALYGDPTRLTEPIKAVQDKFALLPAFLKVRGLVKQHLDSFNFLLNSELRKIV--AANEK 75

Query: 188 VISENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEI 367
           V  + +PNFYLKY +I V  P ++ED++ V TTP QCRLRD TY+API VD+EYTRG EI
Sbjct: 76  VTCDTDPNFYLKYTNIYVGSPSMDEDMVQVGTTPQQCRLRDATYSAPITVDIEYTRGKEI 135

Query: 368 VVRKGK---GAITIGRLPIMLRSCQCILTGK 451
           VV++G+   GA+ IGR+P+MLR  +C+L GK
Sbjct: 136 VVKRGRGGVGAVCIGRMPLMLRCDRCVLYGK 166


>ref|XP_001693928.1| DNA-directed RNA polymerase III, subunit 2 [Chlamydomonas
           reinhardtii] gi|158277095|gb|EDP02864.1| DNA-directed
           RNA polymerase III, subunit 2 [Chlamydomonas
           reinhardtii]
          Length = 1161

 Score =  179 bits (454), Expect = 3e-43
 Identities = 88/151 (58%), Positives = 114/151 (75%), Gaps = 3/151 (1%)
 Frame = +2

Query: 8   EVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEK 187
           E  Y +   L  P+KT  DKF LLPAFLKVRGLVKQH+DSFN+ +N E++KI+   ANEK
Sbjct: 12  EALYGDPTRLTEPIKTVNDKFALLPAFLKVRGLVKQHLDSFNYLLNSELRKIV--AANEK 69

Query: 188 VISENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEI 367
           V  + +PNFYLKY +I V  P ++ED++ V TTP QCRLRD TY+API VD+EYTRG EI
Sbjct: 70  VTCDTDPNFYLKYTNIYVGGPSVDEDMVQVGTTPQQCRLRDATYSAPITVDIEYTRGKEI 129

Query: 368 VVRKGK---GAITIGRLPIMLRSCQCILTGK 451
           VV++G+   GA++IGR+P+MLR  +C+L  K
Sbjct: 130 VVKRGRGGVGAVSIGRMPLMLRCDRCVLYNK 160


>ref|XP_006850351.1| hypothetical protein AMTR_s00020p00247890 [Amborella trichopoda]
           gi|548853972|gb|ERN11932.1| hypothetical protein
           AMTR_s00020p00247890 [Amborella trichopoda]
          Length = 214

 Score =  178 bits (451), Expect = 7e-43
 Identities = 89/140 (63%), Positives = 109/140 (77%), Gaps = 2/140 (1%)
 Frame = +2

Query: 38  AAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNFY 217
           A PVKTAVDKFQLLP FLK+RGLVKQHIDSFN+FVN+EIKKI+HA +NE++ SE +P + 
Sbjct: 11  ARPVKTAVDKFQLLPEFLKIRGLVKQHIDSFNYFVNNEIKKIVHAPSNERITSEVDPAYT 70

Query: 218 LKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEY--TRGNEIVVRKGKGA 391
           LKYLD+ +  P  + + +  + TP +CRLRDMTY+APIK  VEY  T+G EIV       
Sbjct: 71  LKYLDVSIGTPSYDTNTVAEKVTPQECRLRDMTYSAPIKAIVEYAKTKGGEIV----HST 126

Query: 392 ITIGRLPIMLRSCQCILTGK 451
           ITIG LPIMLRSCQC+L+GK
Sbjct: 127 ITIGYLPIMLRSCQCVLSGK 146


>ref|XP_002598730.1| hypothetical protein BRAFLDRAFT_282817 [Branchiostoma floridae]
           gi|229284004|gb|EEN54742.1| hypothetical protein
           BRAFLDRAFT_282817 [Branchiostoma floridae]
          Length = 1137

 Score =  174 bits (441), Expect = 1e-41
 Identities = 89/145 (61%), Positives = 113/145 (77%), Gaps = 1/145 (0%)
 Frame = +2

Query: 20  ENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISE 199
           E   +LA+P+ T  +K++LLPAFLKV+GLVKQHIDSFN+F+N EIKKI+  KANEK++S+
Sbjct: 3   EQLESLASPLNTIQEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIM--KANEKIVSD 60

Query: 200 NNPNFYLKYLDIRVDRPCLEEDL-LHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVR 376
            +PNFYLKYL+I V  P +EE   +     PH+CRLRDMTY+API VD+EYTRGN+ VVR
Sbjct: 61  ADPNFYLKYLNIYVGMPDVEEGFNITKPIAPHECRLRDMTYSAPITVDIEYTRGNQRVVR 120

Query: 377 KGKGAITIGRLPIMLRSCQCILTGK 451
                + IGR+PIMLRS  C+LTGK
Sbjct: 121 NN---LPIGRMPIMLRSSNCVLTGK 142


>ref|XP_005844337.1| hypothetical protein CHLNCDRAFT_56318 [Chlorella variabilis]
           gi|307103979|gb|EFN52235.1| hypothetical protein
           CHLNCDRAFT_56318 [Chlorella variabilis]
          Length = 1155

 Score =  173 bits (438), Expect = 2e-41
 Identities = 82/132 (62%), Positives = 104/132 (78%), Gaps = 3/132 (2%)
 Frame = +2

Query: 65  KFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNFYLKYLDIRVD 244
           K+ LLPAFL+ +GL++QH+ SFN F+  ++ KII AK NE+V  + +PNFYL+Y +I V 
Sbjct: 12  KYALLPAFLQAKGLIRQHVSSFNHFIASDLLKIIKAKGNERVTCDADPNFYLRYTNIYVG 71

Query: 245 RPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGK---GAITIGRLPI 415
           RP LEED +  E TP+QCRLRD TY+API VDVEYTRG E+V+RKGK   GAI IGR+PI
Sbjct: 72  RPSLEEDYIQTELTPNQCRLRDQTYSAPISVDVEYTRGKEVVIRKGKSGAGAILIGRMPI 131

Query: 416 MLRSCQCILTGK 451
           MLRS +C+LTGK
Sbjct: 132 MLRSDRCVLTGK 143


>gb|EKC20822.1| DNA-directed RNA polymerase III subunit RPC2 [Crassostrea gigas]
          Length = 1060

 Score =  172 bits (437), Expect = 3e-41
 Identities = 86/144 (59%), Positives = 113/144 (78%), Gaps = 1/144 (0%)
 Frame = +2

Query: 23  NERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISEN 202
           ++  LAAP+KT  +K++LLPAFLKV+GLVKQHIDSFNFF+N EIK I+  KAN+K++S+ 
Sbjct: 11  DKEKLAAPIKTIEEKWKLLPAFLKVKGLVKQHIDSFNFFINVEIKNIM--KANDKILSDA 68

Query: 203 NPNFYLKYLDIRVDRPCLEEDL-LHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRK 379
           +PNFY+KYL+I V  P +EE   +    +PH+CRLRDMTY+API VD+EYTRGN+ +VR 
Sbjct: 69  DPNFYMKYLNIYVGMPDVEEGFNITKPISPHECRLRDMTYSAPITVDIEYTRGNQRIVRN 128

Query: 380 GKGAITIGRLPIMLRSCQCILTGK 451
               + IGR+PIMLRS  C+L GK
Sbjct: 129 N---LPIGRMPIMLRSSNCVLNGK 149


>gb|EFX82130.1| hypothetical protein DAPPUDRAFT_316708 [Daphnia pulex]
          Length = 1135

 Score =  172 bits (435), Expect = 5e-41
 Identities = 88/145 (60%), Positives = 108/145 (74%), Gaps = 1/145 (0%)
 Frame = +2

Query: 17  YENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVIS 196
           Y +   L  P+K   +K++L+PAFLK +GLVKQHIDS+N+F+N EIKKI+  KANEKVIS
Sbjct: 9   YNDLEKLLEPIKAVEEKWKLVPAFLKTKGLVKQHIDSYNYFINVEIKKIV--KANEKVIS 66

Query: 197 ENNPNFYLKYLDIRVDRPCLEEDLLHVE-TTPHQCRLRDMTYAAPIKVDVEYTRGNEIVV 373
             +P FYLKYLDI V +P   ED+ H   TTPH+CRLRDMTY+AP+ VD+EYTRG + VV
Sbjct: 67  FADPTFYLKYLDIHVGKPDSIEDMHHSRLTTPHECRLRDMTYSAPVTVDIEYTRGQQRVV 126

Query: 374 RKGKGAITIGRLPIMLRSCQCILTG 448
           R G   I IGR+PIMLRS  C L G
Sbjct: 127 RNG---IAIGRMPIMLRSSNCTLAG 148


>ref|XP_004070128.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           [Oryzias latipes]
          Length = 1093

 Score =  171 bits (433), Expect = 9e-41
 Identities = 87/142 (61%), Positives = 112/142 (78%), Gaps = 1/142 (0%)
 Frame = +2

Query: 29  RNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNP 208
           + LAAPV T  DK++LLPAFLKV+GLVKQHIDSFN+F+N EIKKI+  KANEK+ S+ +P
Sbjct: 14  QELAAPVNTVADKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIM--KANEKITSDADP 71

Query: 209 NFYLKYLDIRVDRPCLEEDL-LHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGK 385
            +YLKYL+I V  P +EE   +    +PH+CRLRDMTY+API VD+EYTRG++ ++R   
Sbjct: 72  MWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRGSQRIIR--- 128

Query: 386 GAITIGRLPIMLRSCQCILTGK 451
            A+ IGR+PIMLRS  C+LTGK
Sbjct: 129 NALPIGRMPIMLRSSNCVLTGK 150


>ref|XP_005990892.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X1
           [Latimeria chalumnae]
          Length = 1133

 Score =  170 bits (431), Expect = 2e-40
 Identities = 88/140 (62%), Positives = 112/140 (80%), Gaps = 1/140 (0%)
 Frame = +2

Query: 35  LAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNF 214
           LAAPVKT  +K++LLPAFLKV+GLVKQHIDSFN+F+N EIKKI+  KANEKV S+ +P +
Sbjct: 16  LAAPVKTVEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIM--KANEKVTSDADPMW 73

Query: 215 YLKYLDIRVDRPCLEEDL-LHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGKGA 391
           YLKYL+I V  P +EE   +    +PH+CRLRDMTY+API VD+EYTRG++ ++R    A
Sbjct: 74  YLKYLNIYVGLPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRGSQRIIR---NA 130

Query: 392 ITIGRLPIMLRSCQCILTGK 451
           + IGR+PIMLRS  C+LTGK
Sbjct: 131 LPIGRMPIMLRSSNCVLTGK 150


>gb|ELT94631.1| hypothetical protein CAPTEDRAFT_178602 [Capitella teleta]
          Length = 1134

 Score =  170 bits (430), Expect = 2e-40
 Identities = 86/150 (57%), Positives = 114/150 (76%), Gaps = 1/150 (0%)
 Frame = +2

Query: 5   DEVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANE 184
           DE+  + ++ LAAP+KT  +K+QLLPAFLKV+GLVKQHIDSFN+F+N EIK I+  KAN 
Sbjct: 2   DELTPQEKQKLAAPIKTIEEKWQLLPAFLKVKGLVKQHIDSFNYFINVEIKNIM--KANN 59

Query: 185 KVISENNPNFYLKYLDIRVDRPCLEEDL-LHVETTPHQCRLRDMTYAAPIKVDVEYTRGN 361
           K+ S+ + NFY+KYL+I V  P +EE   +    +PH+CRLRDMTY+API VD+EYTRG+
Sbjct: 60  KITSDADQNFYMKYLNIYVGMPDVEEGFNITKPISPHECRLRDMTYSAPITVDIEYTRGS 119

Query: 362 EIVVRKGKGAITIGRLPIMLRSCQCILTGK 451
           + +VR     + IGR+PIMLRS  C+L GK
Sbjct: 120 QRIVRNN---LPIGRMPIMLRSSNCVLVGK 146


>ref|NP_001121521.1| polymerase (RNA) III (DNA directed) polypeptide B [Xenopus
           (Silurana) tropicalis] gi|183986364|gb|AAI66377.1|
           LOC100158643 protein [Xenopus (Silurana) tropicalis]
          Length = 1134

 Score =  170 bits (430), Expect = 2e-40
 Identities = 88/151 (58%), Positives = 115/151 (76%), Gaps = 1/151 (0%)
 Frame = +2

Query: 2   DDEVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKAN 181
           D E  + ++  L APV T  +K++LLPAFLKV+GLVKQHIDSFN+F+N EIKKI+  KAN
Sbjct: 5   DVEFGHLSQEELIAPVDTVQEKWKLLPAFLKVKGLVKQHIDSFNYFINDEIKKIM--KAN 62

Query: 182 EKVISENNPNFYLKYLDIRVDRPCLEEDL-LHVETTPHQCRLRDMTYAAPIKVDVEYTRG 358
           EKV S+ +P +YLKYL+I V  P +EE   +    +PH+CRLRDMTY+API VD+EYTRG
Sbjct: 63  EKVTSDADPMWYLKYLNIYVGLPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRG 122

Query: 359 NEIVVRKGKGAITIGRLPIMLRSCQCILTGK 451
           ++ ++R    A+ IGR+PIMLRS  C+LTGK
Sbjct: 123 SQRIIR---NALPIGRMPIMLRSSNCVLTGK 150


>ref|XP_006789593.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           [Neolamprologus brichardi]
          Length = 1132

 Score =  169 bits (429), Expect = 3e-40
 Identities = 86/142 (60%), Positives = 112/142 (78%), Gaps = 1/142 (0%)
 Frame = +2

Query: 29  RNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNP 208
           + LAAPV T  +K++LLPAFLKV+GLVKQHIDSFN+F+N EIKKI+  KANEK+ S+ +P
Sbjct: 14  QELAAPVNTVAEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIM--KANEKITSDADP 71

Query: 209 NFYLKYLDIRVDRPCLEEDL-LHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGK 385
            +YLKYL+I V  P +EE   +    +PH+CRLRDMTY+API VD+EYTRG++ ++R   
Sbjct: 72  MWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRGSQRIIR--- 128

Query: 386 GAITIGRLPIMLRSCQCILTGK 451
            A+ IGR+PIMLRS  C+LTGK
Sbjct: 129 NALPIGRMPIMLRSSNCVLTGK 150