BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00025354
         (855 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283658.2| PREDICTED: uncharacterized protein LOC100263...    97   2e-23
emb|CBI16537.3| unnamed protein product [Vitis vinifera]               97   2e-23
emb|CAN78881.1| hypothetical protein VITISV_024992 [Vitis vinifera]    97   2e-23
ref|XP_004237346.1| PREDICTED: mediator of RNA polymerase II tra...    96   2e-22
ref|XP_006858614.1| hypothetical protein AMTR_s00198p00028070 [A...   112   2e-22
ref|XP_006445590.1| hypothetical protein CICLE_v10014014mg [Citr...    96   5e-22
ref|XP_006488934.1| PREDICTED: mediator of RNA polymerase II tra...    96   5e-22
ref|XP_006445589.1| hypothetical protein CICLE_v10014014mg [Citr...    96   5e-22
ref|XP_006340093.1| PREDICTED: mediator of RNA polymerase II tra...    91   2e-21
ref|XP_006340094.1| PREDICTED: mediator of RNA polymerase II tra...    91   2e-21
gb|EXC34516.1| Mediator of RNA polymerase II transcription subun...   101   4e-19
ref|XP_006392648.1| hypothetical protein EUTSA_v10011178mg [Eutr...   100   7e-19
gb|EOY08936.1| RNA polymerase II transcription mediators isoform...    83   8e-19
gb|EOY08938.1| RNA polymerase II transcription mediators isoform...    83   8e-19
gb|EOY08937.1| RNA polymerase II transcription mediators isoform...    83   8e-19
gb|EMJ06146.1| hypothetical protein PRUPE_ppa000082mg [Prunus pe...    86   2e-18
ref|XP_006368536.1| hypothetical protein POPTR_0001s04140g [Popu...    95   4e-17
ref|XP_004159367.1| PREDICTED: mediator of RNA polymerase II tra...    93   1e-16
ref|XP_004144140.1| PREDICTED: mediator of RNA polymerase II tra...    93   1e-16
ref|XP_002304853.2| hypothetical protein POPTR_0003s21030g [Popu...    92   2e-16

>ref|XP_002283658.2| PREDICTED: uncharacterized protein LOC100263945 [Vitis vinifera]
          Length = 1932

 Score = 96.7 bits (239), Expect(2) = 2e-23
 Identities = 59/147 (40%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
 Frame = +2

Query: 104 GSAESHGFIFNTANIGDGMAGLDTRGMDVGEQLLSPVFDFQSLDGFGEQPETTKTD-IAS 280
           G+AESH  IF   +  +G +   T  MDV +Q+L  V  FQS D F   P     + +  
Sbjct: 518 GTAESHALIFPAPDC-EGSSPC-TGMMDVSDQMLLSV-GFQSFDNFNPSPPVAMEECLTK 574

Query: 281 NTEGYKDSKSSQAVSQISGESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFKRPY 460
           N E   ++ SS  ++     S  E D L K+EA+  FAPEY  ++ P +E SSS+F+ PY
Sbjct: 575 NQEVTNNTLSSGPLNYTPASSIGEFDHLIKAEALLTFAPEYGAVETPTSESSSSIFRSPY 634

Query: 461 VPKSRRLQNRESHSKIYHYSATPPPSP 541
           +PKSR++++  S +K Y Y ATPP SP
Sbjct: 635 LPKSRKVESSNSSAKDYVYGATPPSSP 661



 Score = 40.0 bits (92), Expect(2) = 2e-23
 Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
 Frame = +1

Query: 583 IRASNDSDIHTELKKLYTHALSAKKFXXXXXXXXXXXXVTQR--RDSSFPGTFSIKIASS 756
           +R    S +H+  KK YTH    K+              +      SSF G  S      
Sbjct: 681 VRHEASSILHS--KKYYTHVEGGKEQHEKRSFTCDNSIASGEGLTPSSFSGFNSTNATKP 738

Query: 757 TQSKRAEGGLGNGGFLKFPRTVLATEIECAMFQ 855
            Q K  EG +G    +   +TVLATE+EC MFQ
Sbjct: 739 VQRKTTEGTIGMEHLVLPMKTVLATEVECIMFQ 771


>emb|CBI16537.3| unnamed protein product [Vitis vinifera]
          Length = 1812

 Score = 96.7 bits (239), Expect(2) = 2e-23
 Identities = 59/147 (40%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
 Frame = +2

Query: 104 GSAESHGFIFNTANIGDGMAGLDTRGMDVGEQLLSPVFDFQSLDGFGEQPETTKTD-IAS 280
           G+AESH  IF   +  +G +   T  MDV +Q+L  V  FQS D F   P     + +  
Sbjct: 545 GTAESHALIFPAPDC-EGSSPC-TGMMDVSDQMLLSV-GFQSFDNFNPSPPVAMEECLTK 601

Query: 281 NTEGYKDSKSSQAVSQISGESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFKRPY 460
           N E   ++ SS  ++     S  E D L K+EA+  FAPEY  ++ P +E SSS+F+ PY
Sbjct: 602 NQEVTNNTLSSGPLNYTPASSIGEFDHLIKAEALLTFAPEYGAVETPTSESSSSIFRSPY 661

Query: 461 VPKSRRLQNRESHSKIYHYSATPPPSP 541
           +PKSR++++  S +K Y Y ATPP SP
Sbjct: 662 LPKSRKVESSNSSAKDYVYGATPPSSP 688



 Score = 40.0 bits (92), Expect(2) = 2e-23
 Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
 Frame = +1

Query: 583 IRASNDSDIHTELKKLYTHALSAKKFXXXXXXXXXXXXVTQR--RDSSFPGTFSIKIASS 756
           +R    S +H+  KK YTH    K+              +      SSF G  S      
Sbjct: 708 VRHEASSILHS--KKYYTHVEGGKEQHEKRSFTCDNSIASGEGLTPSSFSGFNSTNATKP 765

Query: 757 TQSKRAEGGLGNGGFLKFPRTVLATEIECAMFQ 855
            Q K  EG +G    +   +TVLATE+EC MFQ
Sbjct: 766 VQRKTTEGTIGMEHLVLPMKTVLATEVECIMFQ 798


>emb|CAN78881.1| hypothetical protein VITISV_024992 [Vitis vinifera]
          Length = 1154

 Score = 96.7 bits (239), Expect(2) = 2e-23
 Identities = 59/147 (40%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
 Frame = +2

Query: 104 GSAESHGFIFNTANIGDGMAGLDTRGMDVGEQLLSPVFDFQSLDGFGEQPETTKTD-IAS 280
           G+AESH  IF   +  +G +   T  MDV +Q+L  V  FQS D F   P     + +  
Sbjct: 560 GTAESHALIFPAPDC-EGSSPC-TGMMDVSDQMLLSV-GFQSFDNFNPSPPVAMEECLTK 616

Query: 281 NTEGYKDSKSSQAVSQISGESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFKRPY 460
           N E   ++ SS  ++     S  E D L K+EA+  FAPEY  ++ P +E SSS+F+ PY
Sbjct: 617 NQEVTNNTLSSGPLNYTPASSIGEFDHLIKAEALLTFAPEYGAVETPTSESSSSIFRSPY 676

Query: 461 VPKSRRLQNRESHSKIYHYSATPPPSP 541
           +PKSR++++  S +K Y Y ATPP SP
Sbjct: 677 LPKSRKVESSNSSAKDYVYGATPPSSP 703



 Score = 40.0 bits (92), Expect(2) = 2e-23
 Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
 Frame = +1

Query: 583 IRASNDSDIHTELKKLYTHALSAKKFXXXXXXXXXXXXVTQR--RDSSFPGTFSIKIASS 756
           +R    S +H+  KK YTH    K+              +      SSF G  S      
Sbjct: 723 VRHEASSILHS--KKYYTHVEGGKEQHEKRSFTCDNSIASGEGLTPSSFSGFNSTNATKP 780

Query: 757 TQSKRAEGGLGNGGFLKFPRTVLATEIECAMFQ 855
            Q K  EG +G    +   +TVLATE+EC MFQ
Sbjct: 781 VQRKTTEGTIGMEHLVLPMKTVLATEVECIMFQ 813


>ref|XP_004237346.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           13-like [Solanum lycopersicum]
          Length = 1987

 Score = 95.9 bits (237), Expect(2) = 2e-22
 Identities = 57/148 (38%), Positives = 80/148 (54%), Gaps = 2/148 (1%)
 Frame = +2

Query: 104 GSAESHGFIFNTANIGDGMAGLDTRGMDVGEQLLSPVFDFQSLDGFGEQPETTKTD--IA 277
           G+AE+   +F  A+  D  +      MDV +Q+L PV  F S D F + P     D  ++
Sbjct: 543 GTAEAQALMFPAADSVDVSSSPCPSMMDVQDQILLPV-GFSSFDSFNQPPPPAILDDSLS 601

Query: 278 SNTEGYKDSKSSQAVSQISGESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFKRP 457
            + E  K +  +  V+  S   A E + L K+EA+  FAPEY  ++ P  E S S+F+ P
Sbjct: 602 KHQEVIKSAAVTNQVNSASASIADEFNHLIKAEALMSFAPEYGAVETPTGESSHSIFRNP 661

Query: 458 YVPKSRRLQNRESHSKIYHYSATPPPSP 541
           YVPKSR ++   S S  Y YSATPP SP
Sbjct: 662 YVPKSREVETANSSSNSYFYSATPPLSP 689



 Score = 37.0 bits (84), Expect(2) = 2e-22
 Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
 Frame = +1

Query: 595 NDSDIHTELKKLYTHALSAKKFXXXXXXXXXXXXVTQRRD------SSFPGTFSIKIASS 756
           +D+    + KK YTH  S K+              T+         S F  T S+K   +
Sbjct: 711 HDTSSIVQSKKYYTHIESGKEKNDDKVSVYVRSCATRETQVAESPFSGFNSTNSVKYIHN 770

Query: 757 TQSKRAEGGLGNGGFLKFPRTVLATEIECAMFQ 855
              K +EG L  G   +  + VLATE+EC M Q
Sbjct: 771 KTDKASEGLLKAGSSGQSIKPVLATEVECLMCQ 803


>ref|XP_006858614.1| hypothetical protein AMTR_s00198p00028070 [Amborella trichopoda]
            gi|548862724|gb|ERN20081.1| hypothetical protein
            AMTR_s00198p00028070 [Amborella trichopoda]
          Length = 1989

 Score =  112 bits (279), Expect = 2e-22
 Identities = 63/148 (42%), Positives = 87/148 (58%), Gaps = 2/148 (1%)
 Frame = +2

Query: 104  GSAESHGFIFNTANIGDGMAGLDTRGMDVGEQLLSPVFDFQSLDGFGEQPETTKTDIASN 283
            G+AES   +F  A+ GD      T G+DV +Q+L PV DF SL+GF + P   K D  S 
Sbjct: 583  GTAESQALMFPVADPGDIAGTPGTGGLDVSDQMLLPVLDFSSLEGFNQPPTAVKDDATSR 642

Query: 284  T-EGYKDSKSSQAVSQISGESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFK-RP 457
              E   + +SS AVS  SG SA E+D L K+EA+ +FAPEY  ++ P +  SS+      
Sbjct: 643  VHEPMNEIQSSGAVSISSGHSAGELDLLSKAEAMLIFAPEYMAVESPSSTMSSATSTGYH 702

Query: 458  YVPKSRRLQNRESHSKIYHYSATPPPSP 541
            Y P S ++ + + +S +Y Y ATPPPSP
Sbjct: 703  YCPNSGKVDSYQKNSAVYSYGATPPPSP 730


>ref|XP_006445590.1| hypothetical protein CICLE_v10014014mg [Citrus clementina]
           gi|557548201|gb|ESR58830.1| hypothetical protein
           CICLE_v10014014mg [Citrus clementina]
          Length = 1967

 Score = 95.9 bits (237), Expect(2) = 5e-22
 Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
 Frame = +2

Query: 104 GSAESHGFIFNTANIGDGMAGLDTRGMDVGEQLLSPVFDFQSLDGFGEQPETTKTD-IAS 280
           G+AES  F+F+  + GD +       MDV +Q+L P  +F S + F   P     + +  
Sbjct: 538 GTAESQSFMFSAPDCGD-VGSSPVVAMDVSDQMLMP--NFSSFESFNPLPTMAVEECMGK 594

Query: 281 NTEGYKDSKSSQAVSQISGESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFKRPY 460
           + E   ++ +S   +Q    S  E D L K+EA+  FAPEY  ++ P +E SSS+F+ PY
Sbjct: 595 SQEVTNNTLTSGQANQSQASSTGEFDHLMKAEALMTFAPEYGAVETPTSELSSSIFRSPY 654

Query: 461 VPKSRRLQNRESHSKIYHYSATPPPSP 541
           +PKS R+++  S S  Y Y ATPP SP
Sbjct: 655 LPKSYRVESSNSSSNNYVYGATPPGSP 681



 Score = 35.8 bits (81), Expect(2) = 5e-22
 Identities = 30/96 (31%), Positives = 37/96 (38%), Gaps = 9/96 (9%)
 Frame = +1

Query: 595 NDSDIHTELKKLYTHALSAKKFXXXXXXXXXXXXVTQRRD---------SSFPGTFSIKI 747
           +DS      KK Y+H  S+K+             VT +           S F    S   
Sbjct: 702 HDSSALLHSKKYYSHVESSKE-------QNDRKSVTHKDSNAKSDGLVLSPFSNLSSTNA 754

Query: 748 ASSTQSKRAEGGLGNGGFLKFPRTVLATEIECAMFQ 855
             S   K  EG LG        +TVLATE+EC MFQ
Sbjct: 755 IKSLPRKMTEGTLGVEHIFLSKKTVLATEVECLMFQ 790


>ref|XP_006488934.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           13-like [Citrus sinensis]
          Length = 1966

 Score = 95.9 bits (237), Expect(2) = 5e-22
 Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
 Frame = +2

Query: 104 GSAESHGFIFNTANIGDGMAGLDTRGMDVGEQLLSPVFDFQSLDGFGEQPETTKTD-IAS 280
           G+AES  F+F+  + GD +       MDV +Q+L P  +F S + F   P     + +  
Sbjct: 537 GTAESQSFMFSAPDCGD-VGSSPVVAMDVSDQMLMP--NFSSFESFNPLPTMAVEECMGK 593

Query: 281 NTEGYKDSKSSQAVSQISGESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFKRPY 460
           + E   ++ +S   +Q    S  E D L K+EA+  FAPEY  ++ P +E SSS+F+ PY
Sbjct: 594 SQEVTNNTLTSGQANQSQASSTGEFDHLMKAEALMTFAPEYGAVETPTSELSSSIFRSPY 653

Query: 461 VPKSRRLQNRESHSKIYHYSATPPPSP 541
           +PKS R+++  S S  Y Y ATPP SP
Sbjct: 654 LPKSYRVESSNSSSNNYVYGATPPGSP 680



 Score = 35.8 bits (81), Expect(2) = 5e-22
 Identities = 30/96 (31%), Positives = 37/96 (38%), Gaps = 9/96 (9%)
 Frame = +1

Query: 595 NDSDIHTELKKLYTHALSAKKFXXXXXXXXXXXXVTQRRD---------SSFPGTFSIKI 747
           +DS      KK Y+H  S+K+             VT +           S F    S   
Sbjct: 701 HDSSALLHSKKYYSHVESSKE-------QNDRKSVTHKDSNAKSDGLVLSPFSNLSSTNA 753

Query: 748 ASSTQSKRAEGGLGNGGFLKFPRTVLATEIECAMFQ 855
             S   K  EG LG        +TVLATE+EC MFQ
Sbjct: 754 IKSLPRKMTEGTLGVEHIFLSKKTVLATEVECLMFQ 789


>ref|XP_006445589.1| hypothetical protein CICLE_v10014014mg [Citrus clementina]
           gi|557548200|gb|ESR58829.1| hypothetical protein
           CICLE_v10014014mg [Citrus clementina]
          Length = 1742

 Score = 95.9 bits (237), Expect(2) = 5e-22
 Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
 Frame = +2

Query: 104 GSAESHGFIFNTANIGDGMAGLDTRGMDVGEQLLSPVFDFQSLDGFGEQPETTKTD-IAS 280
           G+AES  F+F+  + GD +       MDV +Q+L P  +F S + F   P     + +  
Sbjct: 313 GTAESQSFMFSAPDCGD-VGSSPVVAMDVSDQMLMP--NFSSFESFNPLPTMAVEECMGK 369

Query: 281 NTEGYKDSKSSQAVSQISGESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFKRPY 460
           + E   ++ +S   +Q    S  E D L K+EA+  FAPEY  ++ P +E SSS+F+ PY
Sbjct: 370 SQEVTNNTLTSGQANQSQASSTGEFDHLMKAEALMTFAPEYGAVETPTSELSSSIFRSPY 429

Query: 461 VPKSRRLQNRESHSKIYHYSATPPPSP 541
           +PKS R+++  S S  Y Y ATPP SP
Sbjct: 430 LPKSYRVESSNSSSNNYVYGATPPGSP 456



 Score = 35.8 bits (81), Expect(2) = 5e-22
 Identities = 30/96 (31%), Positives = 37/96 (38%), Gaps = 9/96 (9%)
 Frame = +1

Query: 595 NDSDIHTELKKLYTHALSAKKFXXXXXXXXXXXXVTQRRD---------SSFPGTFSIKI 747
           +DS      KK Y+H  S+K+             VT +           S F    S   
Sbjct: 477 HDSSALLHSKKYYSHVESSKE-------QNDRKSVTHKDSNAKSDGLVLSPFSNLSSTNA 529

Query: 748 ASSTQSKRAEGGLGNGGFLKFPRTVLATEIECAMFQ 855
             S   K  EG LG        +TVLATE+EC MFQ
Sbjct: 530 IKSLPRKMTEGTLGVEHIFLSKKTVLATEVECLMFQ 565


>ref|XP_006340093.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           13-like isoform X1 [Solanum tuberosum]
          Length = 1989

 Score = 90.9 bits (224), Expect(2) = 2e-21
 Identities = 55/146 (37%), Positives = 78/146 (53%), Gaps = 2/146 (1%)
 Frame = +2

Query: 110 AESHGFIFNTANIGDGMAGLDTRGMDVGEQLLSPVFDFQSLDGFGEQPETTKTD--IASN 283
           A++   +F  A+  D  +      MDV +Q+L PV  F S D F + P     D  ++ +
Sbjct: 547 AQAQALMFPAADSVDVSSSPCPSMMDVQDQILLPV-GFSSFDSFNQPPPPAILDDSLSKH 605

Query: 284 TEGYKDSKSSQAVSQISGESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFKRPYV 463
            E  K +  +  V+  S   A E + L K+EA+  FAPEY  ++ P  E S S+F+ PYV
Sbjct: 606 QEVIKSAAVANQVNSASASIAGEFNHLIKAEALMSFAPEYGAVETPTGESSHSIFRNPYV 665

Query: 464 PKSRRLQNRESHSKIYHYSATPPPSP 541
           PKSR ++   S S  Y YSATPP SP
Sbjct: 666 PKSREVETANSSSNSYVYSATPPLSP 691



 Score = 38.9 bits (89), Expect(2) = 2e-21
 Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
 Frame = +1

Query: 598 DSDIHTELKKLYTHALSAKKFXXXXXXXXXXXXVTQRRD------SSFPGTFSIKIASST 759
           D+    + KK YTH  S K+              T+         S F  T S+K   + 
Sbjct: 714 DTSSIVQSKKYYTHIESGKEKNDDKVSGYVRSCATRETQVAQSPFSGFNSTNSVKYIHNK 773

Query: 760 QSKRAEGGLGNGGFLKFPRTVLATEIECAMFQ 855
             K +EG L  G   +  +TVLATE+EC M Q
Sbjct: 774 TDKASEGLLKAGSSGQSIKTVLATEVECLMCQ 805


>ref|XP_006340094.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           13-like isoform X2 [Solanum tuberosum]
          Length = 1962

 Score = 90.9 bits (224), Expect(2) = 2e-21
 Identities = 55/146 (37%), Positives = 78/146 (53%), Gaps = 2/146 (1%)
 Frame = +2

Query: 110 AESHGFIFNTANIGDGMAGLDTRGMDVGEQLLSPVFDFQSLDGFGEQPETTKTD--IASN 283
           A++   +F  A+  D  +      MDV +Q+L PV  F S D F + P     D  ++ +
Sbjct: 547 AQAQALMFPAADSVDVSSSPCPSMMDVQDQILLPV-GFSSFDSFNQPPPPAILDDSLSKH 605

Query: 284 TEGYKDSKSSQAVSQISGESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFKRPYV 463
            E  K +  +  V+  S   A E + L K+EA+  FAPEY  ++ P  E S S+F+ PYV
Sbjct: 606 QEVIKSAAVANQVNSASASIAGEFNHLIKAEALMSFAPEYGAVETPTGESSHSIFRNPYV 665

Query: 464 PKSRRLQNRESHSKIYHYSATPPPSP 541
           PKSR ++   S S  Y YSATPP SP
Sbjct: 666 PKSREVETANSSSNSYVYSATPPLSP 691



 Score = 38.9 bits (89), Expect(2) = 2e-21
 Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
 Frame = +1

Query: 598 DSDIHTELKKLYTHALSAKKFXXXXXXXXXXXXVTQRRD------SSFPGTFSIKIASST 759
           D+    + KK YTH  S K+              T+         S F  T S+K   + 
Sbjct: 714 DTSSIVQSKKYYTHIESGKEKNDDKVSGYVRSCATRETQVAQSPFSGFNSTNSVKYIHNK 773

Query: 760 QSKRAEGGLGNGGFLKFPRTVLATEIECAMFQ 855
             K +EG L  G   +  +TVLATE+EC M Q
Sbjct: 774 TDKASEGLLKAGSSGQSIKTVLATEVECLMCQ 805


>gb|EXC34516.1| Mediator of RNA polymerase II transcription subunit 13-like protein
           [Morus notabilis]
          Length = 1710

 Score =  101 bits (251), Expect = 4e-19
 Identities = 56/146 (38%), Positives = 82/146 (56%)
 Frame = +2

Query: 104 GSAESHGFIFNTANIGDGMAGLDTRGMDVGEQLLSPVFDFQSLDGFGEQPETTKTDIASN 283
           G+AESH  +F+  + GD ++      MDV +QLLS    F   D F + P     +I S 
Sbjct: 284 GTAESHALMFSGPDCGDILSS-PVGIMDVSDQLLSTE-GFTPFDSFSQPPPAPNEEIISK 341

Query: 284 TEGYKDSKSSQAVSQISGESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFKRPYV 463
            +G  ++ S   V+     S  E D + K+EA+  FAPE+  ++ P +E SSS+F+ PY 
Sbjct: 342 NQGVMNNSSLGLVNTSLAFSTSEFDHIIKAEALMTFAPEFGAVEAPTSELSSSIFRSPYF 401

Query: 464 PKSRRLQNRESHSKIYHYSATPPPSP 541
           PKSR++++  S S  Y Y ATPP SP
Sbjct: 402 PKSRKVESSSSSSNTYTYGATPPSSP 427


>ref|XP_006392648.1| hypothetical protein EUTSA_v10011178mg [Eutrema salsugineum]
           gi|567131267|ref|XP_006392649.1| hypothetical protein
           EUTSA_v10011178mg [Eutrema salsugineum]
           gi|557089226|gb|ESQ29934.1| hypothetical protein
           EUTSA_v10011178mg [Eutrema salsugineum]
           gi|557089227|gb|ESQ29935.1| hypothetical protein
           EUTSA_v10011178mg [Eutrema salsugineum]
          Length = 1894

 Score =  100 bits (249), Expect = 7e-19
 Identities = 55/151 (36%), Positives = 84/151 (55%)
 Frame = +2

Query: 104 GSAESHGFIFNTANIGDGMAGLDTRGMDVGEQLLSPVFDFQSLDGFGEQPETTKTDIASN 283
           G+AESH  +F   +   G + +D   MDV +Q++ PV  F S + F   P      +  N
Sbjct: 515 GTAESHALMFPPDSADVGSSPVDM--MDVSDQIVLPV-GFSSFESFNPVPPIIDESLIKN 571

Query: 284 TEGYKDSKSSQAVSQISGESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFKRPYV 463
            E +  S +S  ++Q+S  S  E D L K+EA+  FAPEY  ++ P +E SS+ FK PY+
Sbjct: 572 QEVFNSSVTSVPINQMSSSSTGEFDHLMKAEAMMTFAPEYGAVEAPMSEISSTFFKSPYL 631

Query: 464 PKSRRLQNRESHSKIYHYSATPPPSPRRNVS 556
           PKSR++++  S +  Y Y  TPP +    V+
Sbjct: 632 PKSRKVESSNSRTSNYVYGPTPPATDSDGVA 662


>gb|EOY08936.1| RNA polymerase II transcription mediators isoform 1 [Theobroma
           cacao]
          Length = 1985

 Score = 82.8 bits (203), Expect(2) = 8e-19
 Identities = 55/148 (37%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
 Frame = +2

Query: 104 GSAESHGFIFNTANIGDGMAGLDTRG-MDVGEQLLSPVFDFQSLDGFGEQPETTKTDIAS 280
           G+AES   +F   + GD  AG    G MDV +Q+L PV    S D F   P     +  S
Sbjct: 545 GTAESSAIMFAAPDCGD--AGSSPAGVMDVSDQMLLPVC-LPSFDSFTPHPPVAIEECLS 601

Query: 281 NTEGYKDSK-SSQAVSQISGESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFKRP 457
            ++    S  +S  ++     S  E D L K+EA+  FA EY  ++ P ++ SSS+FK+P
Sbjct: 602 KSQEVTSSAVTSGPLNHTLASSTGEFDHLMKAEALMTFATEYGAVETPASD-SSSIFKKP 660

Query: 458 YVPKSRRLQNRESHSKIYHYSATPPPSP 541
           Y+PKS + ++  S    Y Y ATPP SP
Sbjct: 661 YLPKSHKAESSNSSPNNYIYGATPPSSP 688



 Score = 38.1 bits (87), Expect(2) = 8e-19
 Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
 Frame = +1

Query: 616 ELKKLYTHALSAKKFXXXXXXXXXXXXVTQRRD--SSFPGTFSIKIASSTQSKRAEGGLG 789
           +LKK YT   + K+             VT      S F    S+    S   K  +G  G
Sbjct: 717 QLKKYYTPVETRKERYDGKLLTHNDSSVTNEVSGTSQFANFNSMNAVKSADRKMTQGICG 776

Query: 790 NGGFLKFPRTVLATEIECAMFQ 855
               L   +TVLAT++ECAMFQ
Sbjct: 777 KEHILLSMKTVLATDVECAMFQ 798


>gb|EOY08938.1| RNA polymerase II transcription mediators isoform 3 [Theobroma
           cacao]
          Length = 1605

 Score = 82.8 bits (203), Expect(2) = 8e-19
 Identities = 55/148 (37%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
 Frame = +2

Query: 104 GSAESHGFIFNTANIGDGMAGLDTRG-MDVGEQLLSPVFDFQSLDGFGEQPETTKTDIAS 280
           G+AES   +F   + GD  AG    G MDV +Q+L PV    S D F   P     +  S
Sbjct: 165 GTAESSAIMFAAPDCGD--AGSSPAGVMDVSDQMLLPVC-LPSFDSFTPHPPVAIEECLS 221

Query: 281 NTEGYKDSK-SSQAVSQISGESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFKRP 457
            ++    S  +S  ++     S  E D L K+EA+  FA EY  ++ P ++ SSS+FK+P
Sbjct: 222 KSQEVTSSAVTSGPLNHTLASSTGEFDHLMKAEALMTFATEYGAVETPASD-SSSIFKKP 280

Query: 458 YVPKSRRLQNRESHSKIYHYSATPPPSP 541
           Y+PKS + ++  S    Y Y ATPP SP
Sbjct: 281 YLPKSHKAESSNSSPNNYIYGATPPSSP 308



 Score = 38.1 bits (87), Expect(2) = 8e-19
 Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
 Frame = +1

Query: 616 ELKKLYTHALSAKKFXXXXXXXXXXXXVTQRRD--SSFPGTFSIKIASSTQSKRAEGGLG 789
           +LKK YT   + K+             VT      S F    S+    S   K  +G  G
Sbjct: 337 QLKKYYTPVETRKERYDGKLLTHNDSSVTNEVSGTSQFANFNSMNAVKSADRKMTQGICG 396

Query: 790 NGGFLKFPRTVLATEIECAMFQ 855
               L   +TVLAT++ECAMFQ
Sbjct: 397 KEHILLSMKTVLATDVECAMFQ 418


>gb|EOY08937.1| RNA polymerase II transcription mediators isoform 2 [Theobroma
           cacao]
          Length = 1492

 Score = 82.8 bits (203), Expect(2) = 8e-19
 Identities = 55/148 (37%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
 Frame = +2

Query: 104 GSAESHGFIFNTANIGDGMAGLDTRG-MDVGEQLLSPVFDFQSLDGFGEQPETTKTDIAS 280
           G+AES   +F   + GD  AG    G MDV +Q+L PV    S D F   P     +  S
Sbjct: 321 GTAESSAIMFAAPDCGD--AGSSPAGVMDVSDQMLLPVC-LPSFDSFTPHPPVAIEECLS 377

Query: 281 NTEGYKDSK-SSQAVSQISGESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFKRP 457
            ++    S  +S  ++     S  E D L K+EA+  FA EY  ++ P ++ SSS+FK+P
Sbjct: 378 KSQEVTSSAVTSGPLNHTLASSTGEFDHLMKAEALMTFATEYGAVETPASD-SSSIFKKP 436

Query: 458 YVPKSRRLQNRESHSKIYHYSATPPPSP 541
           Y+PKS + ++  S    Y Y ATPP SP
Sbjct: 437 YLPKSHKAESSNSSPNNYIYGATPPSSP 464



 Score = 38.1 bits (87), Expect(2) = 8e-19
 Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
 Frame = +1

Query: 616 ELKKLYTHALSAKKFXXXXXXXXXXXXVTQRRD--SSFPGTFSIKIASSTQSKRAEGGLG 789
           +LKK YT   + K+             VT      S F    S+    S   K  +G  G
Sbjct: 493 QLKKYYTPVETRKERYDGKLLTHNDSSVTNEVSGTSQFANFNSMNAVKSADRKMTQGICG 552

Query: 790 NGGFLKFPRTVLATEIECAMFQ 855
               L   +TVLAT++ECAMFQ
Sbjct: 553 KEHILLSMKTVLATDVECAMFQ 574


>gb|EMJ06146.1| hypothetical protein PRUPE_ppa000082mg [Prunus persica]
          Length = 1887

 Score = 85.9 bits (211), Expect(2) = 2e-18
 Identities = 52/146 (35%), Positives = 76/146 (52%), Gaps = 1/146 (0%)
 Frame = +2

Query: 104 GSAESHGFIFNTANIGDGMAGLDTRGMDVGEQLLSPVFDFQSLDGFGEQPETTKTD-IAS 280
           G+ ES   +F+  + GD +       MDV +QLL     F S + F   P     + +  
Sbjct: 496 GTTESQALMFSAPDFGD-VVDNPVGVMDVSDQLLLSE-GFASFESFIPPPPAAMEETLIK 553

Query: 281 NTEGYKDSKSSQAVSQISGESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFKRPY 460
           N E    + SS  V+  S  +  E D + K+EA+  FAPEY  ++ P +E SSS+F+ PY
Sbjct: 554 NQEAINSALSSGPVNCSSASNISEFDHIIKAEALMTFAPEYGAVETPTSEVSSSIFRSPY 613

Query: 461 VPKSRRLQNRESHSKIYHYSATPPPS 538
           +PKSR+ ++  S   IY Y  TPP S
Sbjct: 614 LPKSRKAESSNSSPSIYTYGPTPPSS 639



 Score = 33.9 bits (76), Expect(2) = 2e-18
 Identities = 25/81 (30%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
 Frame = +1

Query: 622 KKLYTHALSAKKFXXXXXXXXXXXXVTQR---RDSSFPGTFSIKIASSTQSKRAEGGLGN 792
           K  YTH  S K+             V        S FP   S     + Q K  EG   +
Sbjct: 670 KNYYTHVESGKEQQDRRLLTSSNGIVVAHDGVAQSPFPVLNSTNAVKAAQRKMTEGTFES 729

Query: 793 GGFLKFPRTVLATEIECAMFQ 855
                  RT+ ATEIEC +FQ
Sbjct: 730 ENSFLSMRTIPATEIECILFQ 750


>ref|XP_006368536.1| hypothetical protein POPTR_0001s04140g [Populus trichocarpa]
           gi|550346479|gb|ERP65105.1| hypothetical protein
           POPTR_0001s04140g [Populus trichocarpa]
          Length = 1587

 Score = 94.7 bits (234), Expect = 4e-17
 Identities = 57/149 (38%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
 Frame = +2

Query: 104 GSAESHGFIFNTANIGDGMAGLDTRGMDVGEQLLSPVFDFQSLDGFGEQPETTKTDIASN 283
           G+AES   +F+  + G+ +A      MDV +Q+L PV  F S + F   P     + AS 
Sbjct: 170 GTAESQALMFSGPDCGE-VANSPIGVMDVVDQMLPPVA-FPSFESFNPSPAVVIDESASK 227

Query: 284 TEGYKDSKSSQAVSQIS---GESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFKR 454
           ++  +D+  + A+  ++     S+ E D L K+EA+  FAPEY  ++ P +EFSSS+F+ 
Sbjct: 228 SQ--EDTHGTLALIPVNCTPSSSSGEFDHLIKAEALMTFAPEYGAVETPTSEFSSSIFRS 285

Query: 455 PYVPKSRRLQNRESHSKIYHYSATPPPSP 541
           PY PKSR++++  S S  Y Y ATPP SP
Sbjct: 286 PYCPKSRQVESSNSSSNNYAYGATPPSSP 314


>ref|XP_004159367.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           13-like [Cucumis sativus]
          Length = 1925

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
 Frame = +2

Query: 104 GSAESHGFIFNTANIGDGMAGLDTRGMDVGEQLLSPVFDFQSLDGFGEQ-PETTKTDIAS 280
           G+ ES   +F+  +  D +       MDV +Q+L PV  F S D F    P TT+  ++ 
Sbjct: 530 GTTESQSLMFSAPDYTD-VGSSPVVVMDVSDQMLLPV-GFPSFDSFNPAVPMTTEEVLSK 587

Query: 281 NTEGYKDSKSSQAVSQISGESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFKRPY 460
           + E   ++ SS   +Q    S+ E D + K+EA+   APEY  ++ P +EFSSS+F+ PY
Sbjct: 588 DHEVTNNALSSVTANQTPVSSSGEFDQITKAEALMTLAPEYGAVETPTSEFSSSMFRSPY 647

Query: 461 VPKSRRLQNRESHSKIYHYSATPPPSP 541
           +PK+R L++    +  Y Y ATPP SP
Sbjct: 648 IPKTRELESSNLSTNSYIYGATPPSSP 674


>ref|XP_004144140.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           13-like [Cucumis sativus]
          Length = 1926

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
 Frame = +2

Query: 104 GSAESHGFIFNTANIGDGMAGLDTRGMDVGEQLLSPVFDFQSLDGFGEQ-PETTKTDIAS 280
           G+ ES   +F+  +  D +       MDV +Q+L PV  F S D F    P TT+  ++ 
Sbjct: 530 GTTESQSLMFSAPDYTD-VGSSPVVVMDVSDQMLLPV-GFPSFDSFNPAVPMTTEEVLSK 587

Query: 281 NTEGYKDSKSSQAVSQISGESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFKRPY 460
           + E   ++ SS   +Q    S+ E D + K+EA+   APEY  ++ P +EFSSS+F+ PY
Sbjct: 588 DHEVTNNALSSVTANQTPVSSSGEFDQITKAEALMTLAPEYGAVETPTSEFSSSMFRSPY 647

Query: 461 VPKSRRLQNRESHSKIYHYSATPPPSP 541
           +PK+R L++    +  Y Y ATPP SP
Sbjct: 648 IPKTRELESSNLSTNSYIYGATPPSSP 674


>ref|XP_002304853.2| hypothetical protein POPTR_0003s21030g [Populus trichocarpa]
           gi|550343676|gb|EEE79832.2| hypothetical protein
           POPTR_0003s21030g [Populus trichocarpa]
          Length = 1588

 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 56/147 (38%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
 Frame = +2

Query: 104 GSAESHGFIFNTANIGDGMAGLDTRGMDVGEQLLSPVFDFQSLDGFGEQPETTKTDIASN 283
           G+AES   +F+  + G+ +A      MDV +Q+L P   F S + F   P     + AS 
Sbjct: 170 GTAESQALMFSGPDCGE-VANTPIGVMDVVDQMLLPAA-FPSFESFNPSPAVAIDESASK 227

Query: 284 T-EGYKDSKSSQAVSQISGESAIEVDSLPKSEAIYMFAPEYTPIQMPKNEFSSSLFKRPY 460
           + E    + +   V+     S+ E D L K+EA+  FAPEY  ++ P +EFSSS+F+RPY
Sbjct: 228 SQEATHGALALVPVNCTPPSSSGEFDYLIKAEALLTFAPEYGAVETPTSEFSSSIFRRPY 287

Query: 461 VPKSRRLQNRESHSKIYHYSATPPPSP 541
            PKS ++++    S  Y Y ATPPPSP
Sbjct: 288 CPKSHQVESSNPSSNKYAYGATPPPSP 314