BLASTX nr result
ID: Ephedra26_contig00025241
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00025241
(680 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_002519994.1| ribosomal protein S19 (chloroplast) [Ephedra... 207 2e-51
gb|EMS67832.1| 50S ribosomal protein L2, chloroplastic [Triticum... 163 5e-38
gb|EMS63307.1| 50S ribosomal protein L2, chloroplastic [Triticum... 163 5e-38
gb|AFW73601.1| 30S ribosomal protein S19 [Zea mays] 145 1e-32
ref|YP_001876617.1| no product specified [Welwitschia mirabilis]... 144 3e-32
ref|YP_002519744.1| ribosomal protein S19 [Gnetum parvifolium] g... 144 3e-32
dbj|BAN16904.1| ribosomal protein S19 (chloroplast) [Gnetum ula] 143 4e-32
ref|XP_003693191.1| PREDICTED: 50S ribosomal protein L2-like [Ap... 120 5e-25
ref|YP_002519995.1| ribosomal protein L2 (chloroplast) [Ephedra ... 117 2e-24
dbj|BAG06470.1| ribosomal protein S19 [Annona montana] 113 6e-23
ref|YP_008592680.1| ribosomal protein S19 (chloroplast) [Berberi... 112 8e-23
dbj|BAG06635.1| ribosomal protein S19 [Caldesia grandis] 112 1e-22
gb|AEX94588.1| ribosomal protein S19 (chloroplast) [Cordyline au... 112 1e-22
ref|YP_008712218.1| 30S ribosomal protein S19 [Gloeobacter kilau... 110 3e-22
ref|YP_008378822.1| ribosomal protein S19 (chloroplast) [Najas f... 110 3e-22
dbj|BAG06604.1| ribosomal protein S19 [Fissistigma glaucescens] 110 3e-22
ref|NP_039340.1| ribosomal protein S19 [Marchantia polymorpha] g... 108 1e-21
gb|AFM54235.1| Rps19 (chloroplast) [Zamia furfuracea] 108 1e-21
gb|AEZ48718.1| ribosomal protein S19, partial [Nolina atopocarpa] 108 1e-21
gb|AEX94589.1| ribosomal protein S19 (chloroplast) [Trichopetalu... 108 2e-21
>ref|YP_002519994.1| ribosomal protein S19 (chloroplast) [Ephedra equisetina]
gi|220983595|dbj|BAH11362.1| ribosomal protein S19
(chloroplast) [Ephedra equisetina]
Length = 114
Score = 207 bits (527), Expect = 2e-51
Identities = 99/100 (99%), Positives = 100/100 (100%)
Frame = +2
Query: 179 MKYSRKKKSLKQVFAATHSKKKVFIADHLFKKIEKLDTNIKKKKILLTWSRASTVIPKMI 358
MKYSRKKKSLKQVFAATHSKKKVFIADHLFKKIEKLDTNIKKKKILLTWSRASTV+PKMI
Sbjct: 1 MKYSRKKKSLKQVFAATHSKKKVFIADHLFKKIEKLDTNIKKKKILLTWSRASTVVPKMI 60
Query: 359 GYTIAIHNGKEHIPIYITNNMLYHKLGDFVPTRLCPEHPG 478
GYTIAIHNGKEHIPIYITNNMLYHKLGDFVPTRLCPEHPG
Sbjct: 61 GYTIAIHNGKEHIPIYITNNMLYHKLGDFVPTRLCPEHPG 100
>gb|EMS67832.1| 50S ribosomal protein L2, chloroplastic [Triticum urartu]
Length = 257
Score = 163 bits (412), Expect = 5e-38
Identities = 81/152 (53%), Positives = 102/152 (67%)
Frame = +2
Query: 2 NAVDHPHGGGEGKSPIGRKTPITPWGHCTLGKKTRKMVRYSDTFILRRQTKLE*KN*LPM 181
N VDHPHGGGEGK+PIGRK P TPWG+ LG++TRK +YSD+FILRR
Sbjct: 116 NPVDHPHGGGEGKAPIGRKKPTTPWGYPALGRRTRKRKKYSDSFILRR------------ 163
Query: 182 KYSRKKKSLKQVFAATHSKKKVFIADHLFKKIEKLDTNIKKKKILLTWSRASTVIPKMIG 361
T K F+A HL KIEK++ ++K+ ++TWSRAS+++P M+G
Sbjct: 164 -------------PVTRKKTNPFVAHHLLAKIEKVNMK-EEKETIVTWSRASSILPTMVG 209
Query: 362 YTIAIHNGKEHIPIYITNNMLYHKLGDFVPTR 457
+TIAIHNGKEHIPIYITN M+ KLG+FVPTR
Sbjct: 210 HTIAIHNGKEHIPIYITNPMVGRKLGEFVPTR 241
>gb|EMS63307.1| 50S ribosomal protein L2, chloroplastic [Triticum urartu]
Length = 257
Score = 163 bits (412), Expect = 5e-38
Identities = 81/152 (53%), Positives = 102/152 (67%)
Frame = +2
Query: 2 NAVDHPHGGGEGKSPIGRKTPITPWGHCTLGKKTRKMVRYSDTFILRRQTKLE*KN*LPM 181
N VDHPHGGGEGK+PIGRK P TPWG+ LG++TRK +YSD+FILRR
Sbjct: 116 NPVDHPHGGGEGKAPIGRKKPTTPWGYPALGRRTRKRKKYSDSFILRR------------ 163
Query: 182 KYSRKKKSLKQVFAATHSKKKVFIADHLFKKIEKLDTNIKKKKILLTWSRASTVIPKMIG 361
T K F+A HL KIEK++ ++K+ ++TWSRAS+++P M+G
Sbjct: 164 -------------PVTRKKTNPFVAHHLLAKIEKVNMK-EEKETIVTWSRASSILPTMVG 209
Query: 362 YTIAIHNGKEHIPIYITNNMLYHKLGDFVPTR 457
+TIAIHNGKEHIPIYITN M+ KLG+FVPTR
Sbjct: 210 HTIAIHNGKEHIPIYITNPMVGRKLGEFVPTR 241
>gb|AFW73601.1| 30S ribosomal protein S19 [Zea mays]
Length = 246
Score = 145 bits (366), Expect = 1e-32
Identities = 74/152 (48%), Positives = 94/152 (61%)
Frame = +2
Query: 2 NAVDHPHGGGEGKSPIGRKTPITPWGHCTLGKKTRKMVRYSDTFILRRQTKLE*KN*LPM 181
N VDHPHGGGEGK+PIGRK P TPWG+ LG++TRK +Y
Sbjct: 116 NPVDHPHGGGEGKAPIGRKKPTTPWGYPALGRRTRKRKKY-------------------- 155
Query: 182 KYSRKKKSLKQVFAATHSKKKVFIADHLFKKIEKLDTNIKKKKILLTWSRASTVIPKMIG 361
K F+A HL KIEK++ ++K+I++TWSRAS+++P M+G
Sbjct: 156 ----------------RKKTNPFVARHLLAKIEKVNMK-EEKEIIVTWSRASSILPAMVG 198
Query: 362 YTIAIHNGKEHIPIYITNNMLYHKLGDFVPTR 457
+TIAIHNGKEHIPIYITN M+ KLG+FVPTR
Sbjct: 199 HTIAIHNGKEHIPIYITNPMVGRKLGEFVPTR 230
>ref|YP_001876617.1| no product specified [Welwitschia mirabilis]
gi|163311672|gb|ABY26830.1| no product specified
[Welwitschia mirabilis] gi|220983419|dbj|BAH11188.1|
ribosomal protein S19 (chloroplast) [Welwitschia
mirabilis]
Length = 147
Score = 144 bits (362), Expect = 3e-32
Identities = 72/115 (62%), Positives = 91/115 (79%), Gaps = 11/115 (9%)
Frame = +2
Query: 164 KN*LPMKYSR---KKKSLKQVFAATHSKKK-VFIADHLFKKIEKLDTNIKK-------KK 310
K L M+YSR KKKSLK+VFA T KKK F+A++L KK++KL+ N KK KK
Sbjct: 4 KKYLSMEYSRSRKKKKSLKKVFADTPKKKKEAFVANYLLKKLKKLNINRKKLNINRKEKK 63
Query: 311 ILLTWSRASTVIPKMIGYTIAIHNGKEHIPIYITNNMLYHKLGDFVPTRLCPEHP 475
+++TWSRAST++P+M+GYTI +HNGKEH+PIYIT +MLYHKLGDFVPTR+ PEHP
Sbjct: 64 LIVTWSRASTIVPEMVGYTIGVHNGKEHLPIYITESMLYHKLGDFVPTRVFPEHP 118
>ref|YP_002519744.1| ribosomal protein S19 [Gnetum parvifolium]
gi|512721614|ref|YP_008082233.1| ribosomal protein S19
(chloroplast) [Gnetum montanum]
gi|149941478|dbj|BAF64906.1| ribosomal protein S19
[Gnetum parvifolium] gi|220983486|dbj|BAH11254.1|
ribosomal protein S19 (chloroplast) [Gnetum parvifolium]
gi|490345059|gb|AGL11079.1| ribosomal protein S19
(chloroplast) [Gnetum montanum]
Length = 115
Score = 144 bits (362), Expect = 3e-32
Identities = 67/96 (69%), Positives = 81/96 (84%), Gaps = 1/96 (1%)
Frame = +2
Query: 191 RKKKSLKQVFAATH-SKKKVFIADHLFKKIEKLDTNIKKKKILLTWSRASTVIPKMIGYT 367
+KK+SLKQ F ATH SKKK FIA+HL KIEKL N KK+KI++TWSRAST++P+M+GYT
Sbjct: 6 KKKRSLKQAFVATHLSKKKGFIANHLLTKIEKLKRN-KKQKIIITWSRASTIVPEMVGYT 64
Query: 368 IAIHNGKEHIPIYITNNMLYHKLGDFVPTRLCPEHP 475
A+HNGKEH+P+YIT NMLY KLGDF PTR+ PE P
Sbjct: 65 FAVHNGKEHLPVYITENMLYQKLGDFAPTRIAPERP 100
>dbj|BAN16904.1| ribosomal protein S19 (chloroplast) [Gnetum ula]
Length = 115
Score = 143 bits (361), Expect = 4e-32
Identities = 66/98 (67%), Positives = 82/98 (83%), Gaps = 1/98 (1%)
Frame = +2
Query: 185 YSRKKKSLKQVFAATH-SKKKVFIADHLFKKIEKLDTNIKKKKILLTWSRASTVIPKMIG 361
+ +KK+SLK+ F ATH SKKK FIA+HL KIEKL N KK+KI++TWSRAST++P+M+G
Sbjct: 4 FKKKKRSLKRAFVATHLSKKKGFIANHLLTKIEKLKRN-KKQKIIITWSRASTIVPEMVG 62
Query: 362 YTIAIHNGKEHIPIYITNNMLYHKLGDFVPTRLCPEHP 475
YT A+HNGKEH+P+YIT NMLY KLGDF PTR+ PE P
Sbjct: 63 YTFAVHNGKEHLPVYITENMLYQKLGDFAPTRIAPERP 100
>ref|XP_003693191.1| PREDICTED: 50S ribosomal protein L2-like [Apis florea]
Length = 404
Score = 120 bits (300), Expect = 5e-25
Identities = 63/157 (40%), Positives = 87/157 (55%)
Frame = +2
Query: 2 NAVDHPHGGGEGKSPIGRKTPITPWGHCTLGKKTRKMVRYSDTFILRRQTKLE*KN*LPM 181
N DHPHGGGEGK+P+GR P+TPWG G KTR R S+ I+R
Sbjct: 274 NPNDHPHGGGEGKAPVGRPQPMTPWGKKARGIKTRNSKRASEKLIIRH------------ 321
Query: 182 KYSRKKKSLKQVFAATHSKKKVFIADHLFKKIEKLDTNIKKKKILLTWSRASTVIPKMIG 361
RK S L KK++ + +KK+++ TWSR ST+ P +G
Sbjct: 322 ---RKDAS-------------------LLKKVD-AQADTEKKQVIKTWSRRSTIFPSFVG 358
Query: 362 YTIAIHNGKEHIPIYITNNMLYHKLGDFVPTRLCPEH 472
TIA+++G++H+P+YIT +M+ HKLG+FVPTR H
Sbjct: 359 LTIAVYDGRKHVPVYITEDMVGHKLGEFVPTRTFHGH 395
>ref|YP_002519995.1| ribosomal protein L2 (chloroplast) [Ephedra equisetina]
gi|220983596|dbj|BAH11363.1| ribosomal protein L2
(chloroplast) [Ephedra equisetina]
Length = 266
Score = 117 bits (294), Expect = 2e-24
Identities = 53/53 (100%), Positives = 53/53 (100%)
Frame = +2
Query: 2 NAVDHPHGGGEGKSPIGRKTPITPWGHCTLGKKTRKMVRYSDTFILRRQTKLE 160
NAVDHPHGGGEGKSPIGRKTPITPWGHCTLGKKTRKMVRYSDTFILRRQTKLE
Sbjct: 214 NAVDHPHGGGEGKSPIGRKTPITPWGHCTLGKKTRKMVRYSDTFILRRQTKLE 266
>dbj|BAG06470.1| ribosomal protein S19 [Annona montana]
Length = 96
Score = 113 bits (282), Expect = 6e-23
Identities = 54/81 (66%), Positives = 66/81 (81%)
Frame = +2
Query: 233 SKKKVFIADHLFKKIEKLDTNIKKKKILLTWSRASTVIPKMIGYTIAIHNGKEHIPIYIT 412
S+K F+A+HL KIEKL+ +KKKI+LTWSRAST+IP MIG+TIAIHNGKEH+PIYIT
Sbjct: 5 SQKNPFVANHLLTKIEKLNMK-EKKKIILTWSRASTIIPTMIGHTIAIHNGKEHLPIYIT 63
Query: 413 NNMLYHKLGDFVPTRLCPEHP 475
+M+ HKLG+F PT EHP
Sbjct: 64 GSMVGHKLGEFAPTLTFNEHP 84
>ref|YP_008592680.1| ribosomal protein S19 (chloroplast) [Berberis bealei]
gi|552546158|ref|YP_008592708.1| ribosomal protein S19
(chloroplast) [Berberis bealei]
gi|166244891|dbj|BAG06478.1| ribosomal protein S19
[Mahonia fortunei] gi|536462721|gb|AGU37086.1| ribosomal
protein S19 (chloroplast) [Berberis bealei]
gi|536462749|gb|AGU37114.1| ribosomal protein S19
(chloroplast) [Berberis bealei]
Length = 95
Score = 112 bits (281), Expect = 8e-23
Identities = 53/79 (67%), Positives = 68/79 (86%)
Frame = +2
Query: 236 KKKVFIADHLFKKIEKLDTNIKKKKILLTWSRASTVIPKMIGYTIAIHNGKEHIPIYITN 415
KKK F+A+HL +KIEKL+ +K+ I++TWSRAST+IPKMIG+TIAIHNGKEH+PIYIT+
Sbjct: 9 KKKPFVANHLLEKIEKLNRRTEKE-IIVTWSRASTIIPKMIGHTIAIHNGKEHLPIYITD 67
Query: 416 NMLYHKLGDFVPTRLCPEH 472
+M+ HKLG+F PTR EH
Sbjct: 68 SMVGHKLGEFAPTRNFREH 86
>dbj|BAG06635.1| ribosomal protein S19 [Caldesia grandis]
Length = 107
Score = 112 bits (280), Expect = 1e-22
Identities = 53/84 (63%), Positives = 68/84 (80%)
Frame = +2
Query: 224 ATHSKKKVFIADHLFKKIEKLDTNIKKKKILLTWSRASTVIPKMIGYTIAIHNGKEHIPI 403
A KK F+A+HL +KIEKL+ ++K+I++TWSRAST+IP MIG+TIAIHNGKEH PI
Sbjct: 2 ARSRKKNPFVANHLLRKIEKLNRR-EQKEIIVTWSRASTIIPTMIGHTIAIHNGKEHFPI 60
Query: 404 YITNNMLYHKLGDFVPTRLCPEHP 475
YIT+ M+ HKLG+FVPTR+ HP
Sbjct: 61 YITDGMVGHKLGEFVPTRIFGGHP 84
>gb|AEX94588.1| ribosomal protein S19 (chloroplast) [Cordyline australis]
Length = 92
Score = 112 bits (279), Expect = 1e-22
Identities = 52/79 (65%), Positives = 66/79 (83%)
Frame = +2
Query: 236 KKKVFIADHLFKKIEKLDTNIKKKKILLTWSRASTVIPKMIGYTIAIHNGKEHIPIYITN 415
KK F+A+HL +KIEKL+ K+K+I++TWSRAST+IPKM+G+TIAIHNGKEH+PIYITN
Sbjct: 6 KKNPFVANHLSRKIEKLNMR-KEKEIIVTWSRASTIIPKMVGHTIAIHNGKEHLPIYITN 64
Query: 416 NMLYHKLGDFVPTRLCPEH 472
M+ HKLG+FVPT H
Sbjct: 65 RMVGHKLGEFVPTLTFERH 83
>ref|YP_008712218.1| 30S ribosomal protein S19 [Gloeobacter kilaueensis JS1]
gi|554671976|ref|WP_023173671.1| 30S ribosomal protein
S19 [Gloeobacter kilaueensis]
gi|553883069|gb|AGY58511.1| 30S ribosomal protein S19
[Gloeobacter kilaueensis JS1]
Length = 92
Score = 110 bits (276), Expect = 3e-22
Identities = 49/81 (60%), Positives = 67/81 (82%)
Frame = +2
Query: 236 KKKVFIADHLFKKIEKLDTNIKKKKILLTWSRASTVIPKMIGYTIAIHNGKEHIPIYITN 415
KK VF+ADHL +KIE L++ +K+I+ TWSRASTV+P+MIG+TI++HNGK+HIP+Y+T
Sbjct: 6 KKGVFVADHLLRKIETLNSK-NEKRIIKTWSRASTVVPQMIGHTISVHNGKDHIPVYVTE 64
Query: 416 NMLYHKLGDFVPTRLCPEHPG 478
M+ HKLG+FVPTR+ H G
Sbjct: 65 QMVGHKLGEFVPTRIFKGHAG 85
>ref|YP_008378822.1| ribosomal protein S19 (chloroplast) [Najas flexilis]
gi|427920127|gb|AFY64158.1| ribosomal protein S19
(chloroplast) [Najas flexilis]
Length = 100
Score = 110 bits (276), Expect = 3e-22
Identities = 52/84 (61%), Positives = 64/84 (76%)
Frame = +2
Query: 224 ATHSKKKVFIADHLFKKIEKLDTNIKKKKILLTWSRASTVIPKMIGYTIAIHNGKEHIPI 403
A KK F ADHL KKIEK + N ++K+I+ TWSRAS ++P M+G TI IHNGKEH+PI
Sbjct: 2 ALSRKKNPFAADHLLKKIEKANEN-EEKEIIKTWSRASAILPSMLGNTIGIHNGKEHLPI 60
Query: 404 YITNNMLYHKLGDFVPTRLCPEHP 475
YIT+ ML+HKLG+F PTR EHP
Sbjct: 61 YITDRMLHHKLGEFAPTRTFGEHP 84
>dbj|BAG06604.1| ribosomal protein S19 [Fissistigma glaucescens]
Length = 96
Score = 110 bits (276), Expect = 3e-22
Identities = 53/80 (66%), Positives = 65/80 (81%)
Frame = +2
Query: 236 KKKVFIADHLFKKIEKLDTNIKKKKILLTWSRASTVIPKMIGYTIAIHNGKEHIPIYITN 415
KK F+A+HL +KIEKL+ KKKKI+LTWSRAST+IP MIG+TIAIHNGKEH+PIYIT
Sbjct: 6 KKNPFVANHLLRKIEKLNMK-KKKKIILTWSRASTIIPTMIGHTIAIHNGKEHLPIYITG 64
Query: 416 NMLYHKLGDFVPTRLCPEHP 475
+M+ +KLG+F PT HP
Sbjct: 65 SMVGYKLGEFAPTLTFNGHP 84
>ref|NP_039340.1| ribosomal protein S19 [Marchantia polymorpha]
gi|133853|sp|P06377.3|RR19_MARPO RecName: Full=30S
ribosomal protein S19, chloroplastic
gi|11715|emb|CAA28126.1| rps19 [Marchantia polymorpha]
Length = 92
Score = 108 bits (271), Expect = 1e-21
Identities = 50/79 (63%), Positives = 64/79 (81%)
Frame = +2
Query: 236 KKKVFIADHLFKKIEKLDTNIKKKKILLTWSRASTVIPKMIGYTIAIHNGKEHIPIYITN 415
KK F+ADHL KKIE L+ K+KKI++TWSRAST++P MIG+TIA+HNG+EH+PIYIT+
Sbjct: 6 KKGPFVADHLLKKIENLNLK-KEKKIIITWSRASTIVPTMIGHTIAVHNGQEHLPIYITD 64
Query: 416 NMLYHKLGDFVPTRLCPEH 472
M+ HKLG+F PTR H
Sbjct: 65 RMVGHKLGEFAPTRTFRGH 83
>gb|AFM54235.1| Rps19 (chloroplast) [Zamia furfuracea]
Length = 92
Score = 108 bits (271), Expect = 1e-21
Identities = 52/80 (65%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
Frame = +2
Query: 236 KKKVFIADHLFKKIEKLDTNIKK-KKILLTWSRASTVIPKMIGYTIAIHNGKEHIPIYIT 412
KK F+A+HL +KIE L NIKK KKI++TWSRAST++P MIG+TIA+HNGKEH+PIYIT
Sbjct: 6 KKNPFVANHLSRKIENL--NIKKEKKIIVTWSRASTIVPAMIGHTIAVHNGKEHLPIYIT 63
Query: 413 NNMLYHKLGDFVPTRLCPEH 472
+ M+ HKLG+F PTR+ H
Sbjct: 64 DRMVGHKLGEFAPTRILRGH 83
>gb|AEZ48718.1| ribosomal protein S19, partial [Nolina atopocarpa]
Length = 92
Score = 108 bits (271), Expect = 1e-21
Identities = 50/81 (61%), Positives = 66/81 (81%)
Frame = +2
Query: 236 KKKVFIADHLFKKIEKLDTNIKKKKILLTWSRASTVIPKMIGYTIAIHNGKEHIPIYITN 415
KK F+A+HL +KIEKL+ ++K+I++TWSRAST+IPKMIG+TIA+HNGKEH+PIYIT+
Sbjct: 6 KKNPFVANHLSRKIEKLNMR-EEKEIIVTWSRASTIIPKMIGHTIAVHNGKEHLPIYITD 64
Query: 416 NMLYHKLGDFVPTRLCPEHPG 478
M+ HKLG+F PT H G
Sbjct: 65 RMVGHKLGEFAPTLTFARHAG 85
>gb|AEX94589.1| ribosomal protein S19 (chloroplast) [Trichopetalum plumosum]
Length = 92
Score = 108 bits (270), Expect = 2e-21
Identities = 50/79 (63%), Positives = 66/79 (83%)
Frame = +2
Query: 236 KKKVFIADHLFKKIEKLDTNIKKKKILLTWSRASTVIPKMIGYTIAIHNGKEHIPIYITN 415
K F+A+HL +K+EKL + K K+I++TWSRAST+IP+MIG+TIAIHNGKEH+PIYIT
Sbjct: 6 KNNPFVANHLSRKMEKLSMS-KGKEIIVTWSRASTIIPQMIGHTIAIHNGKEHLPIYITE 64
Query: 416 NMLYHKLGDFVPTRLCPEH 472
+M+ HKLG+FVPTR+ H
Sbjct: 65 SMVGHKLGEFVPTRIFERH 83