BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00025161
         (518 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16520.1| unknown [Picea sitchensis]                             157   1e-36
ref|XP_006844123.1| hypothetical protein AMTR_s00006p00257020 [A...   150   1e-34
ref|XP_004239007.1| PREDICTED: putative pentatricopeptide repeat...   147   1e-33
gb|ESW33429.1| hypothetical protein PHAVU_001G068400g [Phaseolus...   147   1e-33
ref|XP_006828004.1| hypothetical protein AMTR_s00008p00241920 [A...   147   1e-33
gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis]     147   2e-33
ref|XP_004308620.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
ref|XP_004305889.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis]     146   3e-33
ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33
ref|XP_003612258.1| Pentatricopeptide repeat-containing protein ...   145   4e-33
gb|EPS72493.1| hypothetical protein M569_02262, partial [Genlise...   145   5e-33
ref|XP_006348632.1| PREDICTED: putative pentatricopeptide repeat...   145   7e-33
ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   145   7e-33
ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containi...   145   7e-33
gb|EOY21263.1| Tetratricopeptide repeat (TPR)-like superfamily p...   144   9e-33
ref|XP_004504105.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
ref|XP_004244339.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
ref|XP_003589755.1| Pentatricopeptide repeat-containing protein ...   144   2e-32
ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi...   143   2e-32

>gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score =  157 bits (397), Expect = 1e-36
 Identities = 78/172 (45%), Positives = 113/172 (65%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNG 180
           +E  KLF  MP+RN ISW  +ISGF Q G V+ A ++F+ MP   + +WNA I G++QNG
Sbjct: 308 KEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNG 367

Query: 181 KDKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTN 360
           + + AL LF +MQ      +  TF+ +L AC AL  + QG E H  VIR G QSD+ + N
Sbjct: 368 QAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGN 427

Query: 361 ALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
            L+  Y+KCG I+ ARK+FDRM+++D  S + +I GYA++G    +++LFE+
Sbjct: 428 TLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQ 479



 Score =  106 bits (264), Expect = 4e-21
 Identities = 54/152 (35%), Positives = 93/152 (61%)
 Frame = +1

Query: 61  MISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKEALILFRKMQDEHTGAD 240
           ++S + + G +  A  +F++MP K + +W A I  + ++   +EAL  F +MQD     +
Sbjct: 106 LVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPN 165

Query: 241 LTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIHFYSKCGDIKIARKLFD 420
             TF++IL AC  L  +    E H  +++ G +S++ + N L+  Y+K G I+ AR+LFD
Sbjct: 166 HFTFASILPACTDLEVL---GEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFD 222

Query: 421 RMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           +M +RD++SWN +I GY  +G  + A+KLF+E
Sbjct: 223 KMPQRDVVSWNAMIAGYVQNGLIEDALKLFQE 254



 Score =  101 bits (251), Expect = 1e-19
 Identities = 50/166 (30%), Positives = 101/166 (60%)
 Frame = +1

Query: 13  KLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKE 192
           +LFD+MPQR+ +SW  MI+G+ Q GL++ A ++F+++P++ +  WN  + G+ Q G  + 
Sbjct: 219 ELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVEN 278

Query: 193 ALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIH 372
           A+ LF KM ++    +L +++ +++      S+ +  ++   +     + ++   NA+I 
Sbjct: 279 AVELFEKMPEQ----NLVSWNTMIAGYVQNGSVKEAFKLFQIM----PERNVISWNAVIS 330

Query: 373 FYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLF 510
            +++ G ++ A KLF  M   +++SWN +I GY+ +G  + A+KLF
Sbjct: 331 GFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLF 376



 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 46/151 (30%), Positives = 88/151 (58%)
 Frame = +1

Query: 61  MISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKEALILFRKMQDEHTGAD 240
           ++  + ++G ++ A E+F+KMP++ + +WNA I G+ QNG  ++AL LF+++       D
Sbjct: 204 LVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKR----D 259

Query: 241 LTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIHFYSKCGDIKIARKLFD 420
           + T++ +++       +   +E+   +     + +L   N +I  Y + G +K A KLF 
Sbjct: 260 VITWNTMMAGYAQCGDVENAVELFEKM----PEQNLVSWNTMIAGYVQNGSVKEAFKLFQ 315

Query: 421 RMKRRDLISWNTIIPGYAMHGYGDVAIKLFE 513
            M  R++ISWN +I G+A +G  + A+KLF+
Sbjct: 316 IMPERNVISWNAVISGFAQNGQVEEALKLFK 346



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
 Frame = +1

Query: 157 ITGFTQNGKDKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDG- 333
           +    + G+ +EAL + + M +       +T+ ++L  C    S+     +HA++I+   
Sbjct: 36  VKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQF 95

Query: 334 -CQSDLSLTNALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLF 510
            CQ D+SL N L+  Y K G +  AR++FD M  ++++SW  +I  YA H +G  A+  F
Sbjct: 96  ECQ-DISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFF 154

Query: 511 EE 516
            E
Sbjct: 155 YE 156


>ref|XP_006844123.1| hypothetical protein AMTR_s00006p00257020 [Amborella trichopoda]
            gi|548846522|gb|ERN05798.1| hypothetical protein
            AMTR_s00006p00257020 [Amborella trichopoda]
          Length = 965

 Score =  150 bits (380), Expect = 1e-34
 Identities = 73/170 (42%), Positives = 114/170 (67%), Gaps = 2/170 (1%)
 Frame = +1

Query: 13   KLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKT--IAAWNATITGFTQNGKD 186
            ++FDE+ +RN +S+  MI+G+C+ G+V+ A  IF KMP +     +W   ITG+ QNG  
Sbjct: 611  RVFDELSERNSVSYNTMITGYCKCGMVEEAKRIFNKMPERERDSVSWTTMITGYMQNGHS 670

Query: 187  KEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNAL 366
            +EAL LFR M+   + +D  TF ++L+A GAL ++ QG EIHA +IR   QS+L   +AL
Sbjct: 671  REALELFRGMKFADSASDQFTFGSVLTAIGALMALKQGKEIHAYIIRTNYQSNLFAGSAL 730

Query: 367  IHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
            +  YSKCG IK A  +F ++ ++++ISW  ++ GYA +G+ + A++LF E
Sbjct: 731  VDMYSKCGAIKSAETIFTQIPQKNVISWTAMLVGYAQNGFNEEAMRLFCE 780



 Score =  110 bits (274), Expect = 3e-22
 Identities = 53/161 (32%), Positives = 93/161 (57%)
 Frame = +1

Query: 34   QRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKEALILFRK 213
            Q N  +   ++  + + G +  A  IF ++P+K + +W A + G+ QNG ++EA+ LF +
Sbjct: 721  QSNLFAGSALVDMYSKCGAIKSAETIFTQIPQKNVISWTAMLVGYAQNGFNEEAMRLFCE 780

Query: 214  MQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIHFYSKCGD 393
            +Q      D  T  +++SA  +L SM +G + H   +  G  S L++ NA++  Y+KCG 
Sbjct: 781  LQRNGIEPDDYTLGSVISASASLASMEEGSQFHCKSVITGLNSFLTVANAIVTMYAKCGS 840

Query: 394  IKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
            I+ A+++F  M+ RD +SW  +I GYA  G     I+L+E+
Sbjct: 841  IEEAQRMFAVMEVRDQVSWTALISGYAQQGNAKETIELYEK 881



 Score =  108 bits (269), Expect = 1e-21
 Identities = 54/168 (32%), Positives = 96/168 (57%)
 Frame = +1

Query: 13  KLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKE 192
           ++FD MP +N ISW  MI+G+ + G +     +F+ MP +   +WNA ++G+   G  K 
Sbjct: 479 RVFDRMPHKNLISWNSMITGYSKWGFLREMENLFKLMPLRDGVSWNAVLSGYANWGDGKT 538

Query: 193 ALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIH 372
           A+ ++++M       +  TFS +L         + G +IH  +IR G +S+  +T+ LI 
Sbjct: 539 AIKVYQEMLHNSQTPNRITFSLLLILSSKQFLEILGRQIHGQIIRIGFESNPFVTSPLID 598

Query: 373 FYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
            Y KC +++ AR++FD +  R+ +S+NT+I GY   G  + A ++F +
Sbjct: 599 MYVKCSNLEGARRVFDELSERNSVSYNTMITGYCKCGMVEEAKRIFNK 646



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
 Frame = +1

Query: 217 QDEHTGADLTTFSAILSACGALTSML-------QGMEIHANVIRDGCQSDLSLTNALIHF 375
           Q  +    +T  SA+LS+   L   L        G ++H  +++    +D  +TN LI+ 
Sbjct: 411 QKPNLQTSMTNLSALLSS---LLKQLPDPSKPHHGKKLHCLILKTVENTDTFVTNNLINL 467

Query: 376 YSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGY 486
           Y+K  ++  AR++FDRM  ++LISWN++I GY+  G+
Sbjct: 468 YAKSWNLSYARRVFDRMPHKNLISWNSMITGYSKWGF 504


>ref|XP_004239007.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Solanum lycopersicum]
          Length = 743

 Score =  147 bits (372), Expect = 1e-33
 Identities = 67/169 (39%), Positives = 108/169 (63%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           E  K+F+E+P+RN + +  MI GF + G+V  +  +F+ MP K   +W   ITG TQNG 
Sbjct: 191 EAEKVFNELPERNVVMYNTMIMGFLRSGMVRESKSLFQDMPEKDSISWTTMITGLTQNGL 250

Query: 184 DKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNA 363
           D+EAL+LFR+M+ E    D  TF +IL+ACG L ++ +G ++HA ++R     ++ + +A
Sbjct: 251 DREALVLFRRMRLEGLPIDQFTFGSILTACGGLQAIEEGKQLHAYIVRTYHSENVFVGSA 310

Query: 364 LIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLF 510
           L+  YSKC +IK A   F RM  ++++SW  ++ GY  +G+ + A+K F
Sbjct: 311 LVDMYSKCRNIKYAGSTFSRMPNKNIVSWTAMVVGYGQNGFSEEAVKAF 359



 Score =  105 bits (261), Expect = 8e-21
 Identities = 49/142 (34%), Positives = 78/142 (54%)
 Frame = +1

Query: 91  VDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKEALILFRKMQDEHTGADLTTFSAILSA 270
           + +A   F +MP K I +W A + G+ QNG  +EA+  F  MQ      D  T  +++S+
Sbjct: 321 IKYAGSTFSRMPNKNIVSWTAMVVGYGQNGFSEEAVKAFCDMQRNGVEPDDFTLGSVISS 380

Query: 271 CGALTSMLQGMEIHANVIRDGCQSDLSLTNALIHFYSKCGDIKIARKLFDRMKRRDLISW 450
           C  L S+ +G + H   +  G  S ++++NAL+  Y KCG I+ +  LFD M  +D +SW
Sbjct: 381 CANLASLEEGAQFHGRALVSGLISFITVSNALVTLYGKCGSIEDSHSLFDEMSVKDEVSW 440

Query: 451 NTIIPGYAMHGYGDVAIKLFEE 516
             ++ GYA  G     I L+E+
Sbjct: 441 TALVSGYAQFGKATETIDLYEK 462



 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 44/169 (26%), Positives = 91/169 (53%), Gaps = 1/169 (0%)
 Frame = +1

Query: 13  KLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKE 192
           ++F+E+PQ N+ SW  ++S + + G +    ++F +MP++   +WN  I+G+   G   +
Sbjct: 61  QVFEEIPQPNQFSWNTVLSVYSKCGNISRMLDVFNRMPKRDGVSWNLIISGYASRGLAID 120

Query: 193 ALILFRKM-QDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALI 369
           AL  ++ M +D     +  TFS +L        +    +IH  +++ G +  + + + L+
Sbjct: 121 ALEAYKLMLEDGGMSLNRITFSTMLILSSDNGWIRMSRQIHGQIVKWGFELYVFVGSPLV 180

Query: 370 HFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
             Y+K G I  A K+F+ +  R+++ +NT+I G+   G    +  LF++
Sbjct: 181 DMYAKAGLIYEAEKVFNELPERNVVMYNTMIMGFLRSGMVRESKSLFQD 229


>gb|ESW33429.1| hypothetical protein PHAVU_001G068400g [Phaseolus vulgaris]
          Length = 616

 Score =  147 bits (371), Expect = 1e-33
 Identities = 74/174 (42%), Positives = 109/174 (62%), Gaps = 3/174 (1%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           E ++LF  MP+RN  SW  MI+GF Q G ++HA ++F +M  K +  W A +TG+ Q+G 
Sbjct: 240 EALELFQRMPERNMPSWNTMITGFIQNGELNHAEKLFREMRVKNVITWTAMMTGYVQHGL 299

Query: 184 DKEALILFRKM-QDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTN 360
            +EA+ +F KM   +    +  TF  +L AC  L  + +G +IH  + +   Q    + +
Sbjct: 300 SEEAVKVFNKMLAADGLKPNTGTFVTVLGACSDLAGLTEGQQIHQMISKTIFQDSTYVVS 359

Query: 361 ALIHFYSKCGDIKIARKLFD--RMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           ALI+ YSKCG+++IARK+FD   +++RDLISWN +I  YA HGYG  AI LF E
Sbjct: 360 ALINMYSKCGELRIARKMFDDGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNE 413



 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 60/175 (34%), Positives = 92/175 (52%), Gaps = 3/175 (1%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNG 180
           +E  +LF EMP RN +SW  M+ G+ + GL   A ++F +MP + + +WN  IT   Q G
Sbjct: 115 KEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITTLVQCG 174

Query: 181 KDKEALILFRKMQDEHTGADLTTFSAILSACGAL---TSMLQGMEIHANVIRDGCQSDLS 351
           K  +A  LF +M+ E      TT  A LS  G +    ++   M +  NV+         
Sbjct: 175 KVDDAQRLFDQMK-ERDVVSWTTMVAGLSKNGRVEDARALFDQMPVR-NVVS-------- 224

Query: 352 LTNALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
             N ++  Y++ G +  A +LF RM  R++ SWNT+I G+  +G  + A KLF E
Sbjct: 225 -WNVMVTGYAQNGRLNEALELFQRMPERNMPSWNTMITGFIQNGELNHAEKLFRE 278



 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 51/172 (29%), Positives = 91/172 (52%), Gaps = 1/172 (0%)
 Frame = +1

Query: 1   QEVMKLFDEMP-QRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQN 177
           +E  KLFD +  ++N ++W  MI G+ +   V  A  +F +MP + + +WN  + G+ +N
Sbjct: 83  REARKLFDRLDAKKNVVTWTAMIKGYIRLNQVKEAERLFYEMPLRNVVSWNTMVDGYARN 142

Query: 178 GKDKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLT 357
           G  ++AL LFR+M + +      T    L  CG +            +     + D+   
Sbjct: 143 GLTQQALDLFRRMPERNV-VSWNTIITTLVQCGKVDDA-------QRLFDQMKERDVVSW 194

Query: 358 NALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFE 513
             ++   SK G ++ AR LFD+M  R+++SWN ++ GYA +G  + A++LF+
Sbjct: 195 TTMVAGLSKNGRVEDARALFDQMPVRNVVSWNVMVTGYAQNGRLNEALELFQ 246



 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 45/171 (26%), Positives = 85/171 (49%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           +  +LFD+M +R+ +SW  M++G  + G V+ A  +F++MP + + +WN  +TG+ QNG+
Sbjct: 178 DAQRLFDQMKERDVVSWTTMVAGLSKNGRVEDARALFDQMPVRNVVSWNVMVTGYAQNGR 237

Query: 184 DKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNA 363
             EAL LF++M +                                        ++   N 
Sbjct: 238 LNEALELFQRMPER---------------------------------------NMPSWNT 258

Query: 364 LIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           +I  + + G++  A KLF  M+ +++I+W  ++ GY  HG  + A+K+F +
Sbjct: 259 MITGFIQNGELNHAEKLFREMRVKNVITWTAMMTGYVQHGLSEEAVKVFNK 309


>ref|XP_006828004.1| hypothetical protein AMTR_s00008p00241920 [Amborella trichopoda]
           gi|548832639|gb|ERM95420.1| hypothetical protein
           AMTR_s00008p00241920 [Amborella trichopoda]
          Length = 620

 Score =  147 bits (371), Expect = 1e-33
 Identities = 77/198 (38%), Positives = 112/198 (56%), Gaps = 31/198 (15%)
 Frame = +1

Query: 16  LFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAA----------------- 144
           LFDEMP++N +SW VMI+ + +KG  D A ++FE+MP+K + A                 
Sbjct: 216 LFDEMPEKNVVSWTVMINSYVEKGRFDEAQQLFEEMPKKNVVALTAMTTGYCKERKLVHA 275

Query: 145 --------------WNATITGFTQNGKDKEALILFRKMQDEHTGADLTTFSAILSACGAL 282
                         WNA ITG+ QNG+ +EAL LF +M    T  D +T   +L+AC  L
Sbjct: 276 RRLFDEIRCRDRVSWNAMITGYAQNGQGEEALKLFAQMFGSGTRPDHSTLIVVLTACAIL 335

Query: 283 TSMLQGMEIHANVIRDGCQSDLSLTNALIHFYSKCGDIKIARKLFDRMKRRDLISWNTII 462
            S+  G + HAN I+ G  S++SL+N+LI+ Y+KCG I  ++  FD   RRDL+SWN II
Sbjct: 336 ASLHVGKQTHANTIKSGFASNVSLSNSLINMYAKCGCIHESQLAFDDASRRDLVSWNAII 395

Query: 463 PGYAMHGYGDVAIKLFEE 516
             YA +G+ +  +   +E
Sbjct: 396 AAYAHNGHHEKTLAFLKE 413



 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 58/172 (33%), Positives = 95/172 (55%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNG 180
           ++   LFDEMP R+ +S   MI+G+ +KG    A E+F  M  K   +WNA I GF  NG
Sbjct: 86  EDACGLFDEMPSRDTVSLNTMIAGYWRKGDAHKAREMFNLMATKNTVSWNAMIAGFADNG 145

Query: 181 KDKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTN 360
           + +EAL  F +M ++ +   + +++A++S       + Q  E+   + +    S  S+ +
Sbjct: 146 QIEEALKYFNEMPEKKS---IASWNAMISGFLRHDMIGQARELFDEMPKRNVISYTSMVS 202

Query: 361 ALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
            L    +KCG+++ AR LFD M  ++++SW  +I  Y   G  D A +LFEE
Sbjct: 203 GL----AKCGEVERARALFDEMPEKNVVSWTVMINSYVEKGRFDEAQQLFEE 250


>gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis]
          Length = 739

 Score =  147 bits (370), Expect = 2e-33
 Identities = 73/173 (42%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNG 180
           ++  +LFD+MP+R+ +SW  M+ G+ + G  D A  +FE MP + IAAWN  I+ + QNG
Sbjct: 285 EDAKELFDKMPERDVVSWTTMLDGYTRMGKYDEALRVFEAMPNQDIAAWNVLISSYEQNG 344

Query: 181 KDKEALILFRKMQ-DEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLT 357
             KEAL +F K+Q  +    D  T  + LSAC  L S+  G  IH  + R G + +  LT
Sbjct: 345 MPKEALSVFHKLQVSKSAKPDEVTLVSSLSACSQLGSIDPGRWIHIYIKRQGIKLNCHLT 404

Query: 358 NALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
            +LI  Y+KCGD++ A ++FD ++R+D+  W+ +I G AMHG G  AI LF E
Sbjct: 405 TSLIDMYAKCGDLEKALEVFDSVERKDVYVWSAMIAGLAMHGCGRAAIDLFYE 457



 Score =  104 bits (259), Expect = 1e-20
 Identities = 52/153 (33%), Positives = 87/153 (56%)
 Frame = +1

Query: 55  IVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKEALILFRKMQDEHTG 234
           +V   G C    +D A+ +F  +P K + +WN+ I  F +     EA  LFR+M+ E+  
Sbjct: 173 LVHFYGSCDD--LDSAYRVFLNIPSKDVVSWNSMIKAFVEGDCPDEAFQLFREMEMENLK 230

Query: 235 ADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIHFYSKCGDIKIARKL 414
            +  T   +L ACG    +  G  + + + R+G   +L+L NA++  Y KCG ++ A++L
Sbjct: 231 PNDITMVGVLCACGKKADIEFGRWLCSYIQRNGIAVNLTLNNAMLDMYVKCGSVEDAKEL 290

Query: 415 FDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFE 513
           FD+M  RD++SW T++ GY   G  D A+++FE
Sbjct: 291 FDKMPERDVVSWTTMLDGYTRMGKYDEALRVFE 323



 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 39/157 (24%), Positives = 82/157 (52%), Gaps = 1/157 (0%)
 Frame = +1

Query: 49  SWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKEALILFRKMQDEH 228
           S ++ +        +D+A ++F+++P+  +  WN  I  +  +    +++++F +M D+ 
Sbjct: 67  SKLITVCAMSSFSSLDYAHQVFDQIPKPNLYTWNTIIRAYASSSDPIQSIVVFLRMLDQC 126

Query: 229 TGA-DLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIHFYSKCGDIKIA 405
             + +  T+  +L A   L +   G   H  V++    SD+ + N+L+HFY  C D+  A
Sbjct: 127 CESPNKYTYPFVLKAASELKASRVGRGFHGMVMKSSLASDVFILNSLVHFYGSCDDLDSA 186

Query: 406 RKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
            ++F  +  +D++SWN++I  +      D A +LF E
Sbjct: 187 YRVFLNIPSKDVVSWNSMIKAFVEGDCPDEAFQLFRE 223


>ref|XP_004308620.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 714

 Score =  146 bits (369), Expect = 2e-33
 Identities = 73/175 (41%), Positives = 113/175 (64%), Gaps = 3/175 (1%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNG 180
           +E ++LF+ MP+R+  SW  M++GF Q G ++ A+E+F +MP+K + +W   ITG+ Q+G
Sbjct: 254 EEALELFERMPERDMPSWNTMVTGFIQNGDLERAWELFVQMPQKNVISWTTMITGYVQDG 313

Query: 181 KDKEALILFRKM-QDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLT 357
           +++EAL++F KM  D     +  TF +ILSAC  L  + +G ++H  +I+   Q  + L 
Sbjct: 314 RNEEALMIFSKMVVDNGARPNEGTFVSILSACSNLAGLCEGRQMHQMIIKTVYQECVHLV 373

Query: 358 NALIHFYSKCGDIKIARKLFD--RMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           +ALI+ YSKCG++  ARK+F+      RD ISWN +I  YA HG G  AI L+ E
Sbjct: 374 SALINMYSKCGELVSARKMFEDGSTIHRDYISWNGMIAAYAHHGCGTEAINLYNE 428



 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/170 (32%), Positives = 95/170 (55%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNG 180
           +E   LF +MP RN +SW  MI G+ +   VD A E+FE+MP + + +WN  +T   Q G
Sbjct: 130 EEAEMLFYQMPVRNVVSWNTMIDGYARSRRVDEALELFERMPERNVVSWNTVLTALAQCG 189

Query: 181 KDKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTN 360
           + +EA  LF  M +     D+ +++A+++       + +  E+   + R    S     N
Sbjct: 190 RIEEARRLFGLMPER----DVISWTAMVAGLSRNGRVDEAREVFDRMPRRNVVS----WN 241

Query: 361 ALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLF 510
           A++  Y++ G ++ A +LF+RM  RD+ SWNT++ G+  +G  + A +LF
Sbjct: 242 AMVTGYAQNGRLEEALELFERMPERDMPSWNTMVTGFIQNGDLERAWELF 291



 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 52/203 (25%), Positives = 102/203 (50%), Gaps = 32/203 (15%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEK-------------------- 120
           +E  ++FDEMP+R+ ++W  +I+ + + G+++ A  +F++                    
Sbjct: 67  REARQVFDEMPERDVVTWTTVITAYVKSGMLEEARSLFDRADAVKNVITWTALVGGYIRL 126

Query: 121 ------------MPRKTIAAWNATITGFTQNGKDKEALILFRKMQDEHTGADLTTFSAIL 264
                       MP + + +WN  I G+ ++ +  EAL LF +M + +  +  T  +A L
Sbjct: 127 RRLEEAEMLFYQMPVRNVVSWNTMIDGYARSRRVDEALELFERMPERNVVSWNTVLTA-L 185

Query: 265 SACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIHFYSKCGDIKIARKLFDRMKRRDLI 444
           + CG +    +   +         + D+    A++   S+ G +  AR++FDRM RR+++
Sbjct: 186 AQCGRIEEARRLFGLMP-------ERDVISWTAMVAGLSRNGRVDEAREVFDRMPRRNVV 238

Query: 445 SWNTIIPGYAMHGYGDVAIKLFE 513
           SWN ++ GYA +G  + A++LFE
Sbjct: 239 SWNAMVTGYAQNGRLEEALELFE 261


>ref|XP_004305889.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Fragaria vesca subsp. vesca]
          Length = 739

 Score =  146 bits (369), Expect = 2e-33
 Identities = 71/171 (41%), Positives = 111/171 (64%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           E + LF +M  ++ +SW  MI+G+ Q G +D A +IFE+M  K   +WN+ ITG+ QNG 
Sbjct: 373 EALSLFRKMTNKDAVSWNTMITGYAQVGEMDKALQIFEQMGEKNTVSWNSLITGYVQNGL 432

Query: 184 DKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNA 363
             +AL     M  E    D +TFS+ LSAC  L ++  G ++H  V++ G  +DL ++NA
Sbjct: 433 YLDALESTVVMGREGKRPDQSTFSSGLSACANLAALQVGRQLHHLVVKTGYLNDLFVSNA 492

Query: 364 LIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           LI  Y+KCG +  A+++F  +   D++SWN++I GYA++GYG+ A++LFEE
Sbjct: 493 LISMYAKCGMVVSAKQVFKDINHGDIVSWNSLISGYALNGYGEEAVELFEE 543



 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/191 (28%), Positives = 97/191 (50%), Gaps = 23/191 (12%)
 Frame = +1

Query: 13  KLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKE 192
           + F+++P  N +SW+ M+ GF + G +  A  +FE+MP + + AWNA +  + Q+ +  +
Sbjct: 221 RYFEKIPDPNVVSWVTMLCGFARNGKIAQAEGLFEQMPSRNVVAWNAMLAAYVQDQQVDK 280

Query: 193 ALILFRKMQDEHTGADLTTFSAILSA-----------------CGALTSMLQG------M 303
           A+ +FR M +  + +  T  +  + A                  GA T+M+ G      M
Sbjct: 281 AVKIFRDMPEMDSVSWTTMINGYVRAGKLEEARELLNRMPYKNIGAQTAMISGYAHNGRM 340

Query: 304 EIHANVIRDGCQSDLSLTNALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHG 483
           +  + +       D    N +I  Y++CG +  A  LF +M  +D +SWNT+I GYA  G
Sbjct: 341 DEASQIFNQIAIRDAVCWNTMIAGYAQCGRMVEALSLFRKMTNKDAVSWNTMITGYAQVG 400

Query: 484 YGDVAIKLFEE 516
             D A+++FE+
Sbjct: 401 EMDKALQIFEQ 411



 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 49/171 (28%), Positives = 100/171 (58%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           E +K+F +M QRN +++  MIS + + G V +A ++F++MP + + +WN  I+G+  N +
Sbjct: 31  EAIKVFSQMTQRNTVTYNSMISAYAKNGRVGNARQLFDEMPHRNLVSWNTMISGYLHNNE 90

Query: 184 DKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNA 363
            +EA  +F +M +     D+ +++ +++ C      L+      +++ D  + D +  NA
Sbjct: 91  VEEAYGIFVRMPER----DMFSWTLMIT-CYTRNGELERARELFDLLPD--KRDAACWNA 143

Query: 364 LIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           +I  YSK G    A+++FD M  ++L+S N+++ GY  +G   + ++ F+E
Sbjct: 144 MIAGYSKKGRFDEAKRMFDEMPVKNLVSCNSMLAGYTKNGEMCLGLRFFQE 194



 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
 Frame = +1

Query: 13  KLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKE 192
           +LFDEMP RN +SW  MISG+     V+ A+ IF +MP + + +W   IT +T+NG+ + 
Sbjct: 65  QLFDEMPHRNLVSWNTMISGYLHNNEVEEAYGIFVRMPERDMFSWTLMITCYTRNGELER 124

Query: 193 ALILFRKMQDEHTGADLTTFSAILSACGALTS---MLQGMEIHANVIRDGCQSDLSLTNA 363
           A  LF  + D+   A      A  S  G       M   M +           +L   N+
Sbjct: 125 ARELFDLLPDKRDAACWNAMIAGYSKKGRFDEAKRMFDEMPV----------KNLVSCNS 174

Query: 364 LIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           ++  Y+K G++ +  + F  M +R+++SWN ++ G+   G    A + FE+
Sbjct: 175 MLAGYTKNGEMCLGLRFFQEMPQRNVVSWNLVLDGFVQVGDLGSAWRYFEK 225



 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 48/173 (27%), Positives = 95/173 (54%), Gaps = 1/173 (0%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAA-WNATITGFTQN 177
           +E   +F  MP+R+  SW +MI+ + + G ++ A E+F+ +P K  AA WNA I G+++ 
Sbjct: 92  EEAYGIFVRMPERDMFSWTLMITCYTRNGELERARELFDLLPDKRDAACWNAMIAGYSKK 151

Query: 178 GKDKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLT 357
           G+  EA    ++M DE    +L + +++L+       M  G+       ++  Q ++   
Sbjct: 152 GRFDEA----KRMFDEMPVKNLVSCNSMLAGYTKNGEMCLGLRF----FQEMPQRNVVSW 203

Query: 358 NALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           N ++  + + GD+  A + F+++   +++SW T++ G+A +G    A  LFE+
Sbjct: 204 NLVLDGFVQVGDLGSAWRYFEKIPDPNVVSWVTMLCGFARNGKIAQAEGLFEQ 256



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 43/161 (26%), Positives = 73/161 (45%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNG 180
           +E  +L + MP +N  +   MISG+   G +D A +IF ++  +    WN  I G+ Q G
Sbjct: 310 EEARELLNRMPYKNIGAQTAMISGYAHNGRMDEASQIFNQIAIRDAVCWNTMIAGYAQCG 369

Query: 181 KDKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTN 360
           +  EAL LFRKM ++                                       D    N
Sbjct: 370 RMVEALSLFRKMTNK---------------------------------------DAVSWN 390

Query: 361 ALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHG 483
            +I  Y++ G++  A ++F++M  ++ +SWN++I GY  +G
Sbjct: 391 TMITGYAQVGEMDKALQIFEQMGEKNTVSWNSLITGYVQNG 431



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/83 (34%), Positives = 49/83 (59%)
 Frame = +1

Query: 61  MISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKEALILFRKMQDEHTGAD 240
           +IS + + G+V  A ++F+ +    I +WN+ I+G+  NG  +EA+ LF +MQ E    D
Sbjct: 493 LISMYAKCGMVVSAKQVFKDINHGDIVSWNSLISGYALNGYGEEAVELFEEMQIEGLNPD 552

Query: 241 LTTFSAILSACGALTSMLQGMEI 309
             TF  +LSAC     + +G+E+
Sbjct: 553 QLTFVGVLSACSHSGLVDRGLEV 575


>gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis]
          Length = 622

 Score =  146 bits (368), Expect = 3e-33
 Identities = 73/173 (42%), Positives = 106/173 (61%), Gaps = 2/173 (1%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           E  +LF+ MP+RN  SW  MI+GF Q G +  A  +F KMP K   +W   I+G+ Q+G+
Sbjct: 248 EAFELFERMPERNLSSWNTMITGFIQNGELKRASNLFNKMPEKNSISWTTMISGYIQDGQ 307

Query: 184 DKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNA 363
           ++EAL +F KM  +    +  TF+++LSAC  L  + +G +IH  + +   Q    L +A
Sbjct: 308 NEEALKMFTKMVVDGIRPNEATFASVLSACSNLAGLGEGQQIHQMISKTVFQGSEILVSA 367

Query: 364 LIHFYSKCGDIKIARKLFD--RMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           LI+ YSKCG++  ARK+FD     +RDL+SWN +I  YA HG G  AI L+ E
Sbjct: 368 LINMYSKCGELSTARKMFDDGSKSQRDLVSWNGMIAAYAHHGCGSEAINLYNE 420



 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 53/170 (31%), Positives = 85/170 (50%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNG 180
           +E  +LFD MP+R+ ISW  M++GF + G +D A  +F++MP + + +WNA ITG+ QN 
Sbjct: 185 EEARRLFDMMPERDVISWTTMVAGFSRNGRIDEARVVFDRMPVQNVVSWNAMITGYAQNM 244

Query: 181 KDKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTN 360
           +  EA  LF +M +                                        +LS  N
Sbjct: 245 RLNEAFELFERMPER---------------------------------------NLSSWN 265

Query: 361 ALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLF 510
            +I  + + G++K A  LF++M  ++ ISW T+I GY   G  + A+K+F
Sbjct: 266 TMITGFIQNGELKRASNLFNKMPEKNSISWTTMISGYIQDGQNEEALKMF 315



 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 51/172 (29%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNE-ISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQN 177
           +E  KLFD    + + I+W VM++G+ +   +  A  +F +MP K + +WN  I G+ QN
Sbjct: 91  EEARKLFDRADAKKDVITWTVMVNGYLRLRRIKEAERLFFEMPVKNVVSWNTMIEGYFQN 150

Query: 178 GKDKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLT 357
           G+   AL LF +M +     ++ +++ I++A      M +   +   +     + D+   
Sbjct: 151 GRVNSALGLFDRMPER----NVVSWNTIITALAQSGRMEEARRLFDMM----PERDVISW 202

Query: 358 NALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFE 513
             ++  +S+ G I  AR +FDRM  ++++SWN +I GYA +   + A +LFE
Sbjct: 203 TTMVAGFSRNGRIDEARVVFDRMPVQNVVSWNAMITGYAQNMRLNEAFELFE 254



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 42/154 (27%), Positives = 76/154 (49%)
 Frame = +1

Query: 52  WIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKEALILFRKMQDEHT 231
           W+  +S   + G +  A ++F++MP + +  W   ITG+ + G  +EA  LF +   +  
Sbjct: 49  WLTKLS---KSGRIGDARQVFDEMPDRDVITWTTVITGYARCGMIEEARKLFDRADAK-- 103

Query: 232 GADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIHFYSKCGDIKIARK 411
             D+ T++ +++    L  + +   +   +      S     N +I  Y + G +  A  
Sbjct: 104 -KDVITWTVMVNGYLRLRRIKEAERLFFEMPVKNVVS----WNTMIEGYFQNGRVNSALG 158

Query: 412 LFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFE 513
           LFDRM  R+++SWNTII   A  G  + A +LF+
Sbjct: 159 LFDRMPERNVVSWNTIITALAQSGRMEEARRLFD 192


>ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 748

 Score =  145 bits (367), Expect = 4e-33
 Identities = 72/171 (42%), Positives = 106/171 (61%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           E + LF +MP +N +SW  MISG+ Q G +D A EIF+ M  K I +WN+ I GF QN  
Sbjct: 377 EALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNL 436

Query: 184 DKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNA 363
             +AL     M  E    D +TF+  LSAC  L ++  G ++H  +++ G  +DL + NA
Sbjct: 437 YLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNA 496

Query: 364 LIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           LI  Y+KCG ++ A ++F  ++  DLISWN++I GYA++GY + A K FE+
Sbjct: 497 LIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQ 547



 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 54/170 (31%), Positives = 92/170 (54%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           E  +LFD MP +N +SW  MI+ + Q   VD A ++F+KMP K   +W   I G+ + GK
Sbjct: 253 EARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGK 312

Query: 184 DKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNA 363
             EA    R++ ++    D+T  +A++S       + +  ++ + +       D+   N+
Sbjct: 313 LDEA----RQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRI----GAHDVVCWNS 364

Query: 364 LIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFE 513
           +I  YS+ G +  A  LF +M  ++ +SWNT+I GYA  G  D A ++F+
Sbjct: 365 MIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQ 414



 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 48/168 (28%), Positives = 95/168 (56%)
 Frame = +1

Query: 13  KLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKE 192
           +LF+++P  N +SW+ M+ G  + G +  A E+F++MP K + +WNA I  + Q+ +  E
Sbjct: 225 QLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDE 284

Query: 193 ALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIH 372
           A+ LF+KM  +    D  +++ I++    +  + +  +++  +    C+ D++   AL+ 
Sbjct: 285 AVKLFKKMPHK----DSVSWTTIINGYIRVGKLDEARQVYNQM---PCK-DITAQTALMS 336

Query: 373 FYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
              + G I  A ++F R+   D++ WN++I GY+  G  D A+ LF +
Sbjct: 337 GLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQ 384



 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 47/172 (27%), Positives = 90/172 (52%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNG 180
           ++  +LFD+M  RN +SW  MI+G+    +V+ A E+F+ MP +   +W   IT +T+ G
Sbjct: 65  RDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMPERDNFSWALMITCYTRKG 124

Query: 181 KDKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTN 360
           K ++A  L   + D+    D   ++A+++            ++   +       DL   N
Sbjct: 125 KLEKARELLELVPDK---LDTACWNAMIAGYAKKGQFNDAKKVFEQM----PAKDLVSYN 177

Query: 361 ALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           +++  Y++ G + +A + F+ M  R+++SWN ++ GY   G    A +LFE+
Sbjct: 178 SMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEK 229



 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 47/172 (27%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNG 180
           +E +++F  M  +N +++  MIS   +   +  A ++F++M  + + +WN  I G+  N 
Sbjct: 34  EEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNN 93

Query: 181 KDKEALILFRKMQDEHTGADLTTFS-AILSACGALTSMLQGMEIHANVIRDGCQSDLSLT 357
             +EA  LF  M +         FS A++  C      L+       ++ D  + D +  
Sbjct: 94  MVEEASELFDVMPER------DNFSWALMITCYTRKGKLEKARELLELVPD--KLDTACW 145

Query: 358 NALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFE 513
           NA+I  Y+K G    A+K+F++M  +DL+S+N+++ GY  +G   +A++ FE
Sbjct: 146 NAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFE 197



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 1/172 (0%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           +  K+F++MP ++ +S+  M++G+ Q G +  A + FE M  + + +WN  + G+ ++G 
Sbjct: 160 DAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGD 219

Query: 184 DKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQS-DLSLTN 360
              A  LF K+ + +        S +   CG       G    A  + D   S ++   N
Sbjct: 220 LSSAWQLFEKIPNPN------AVSWVTMLCGLAK---YGKMAEARELFDRMPSKNVVSWN 270

Query: 361 ALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           A+I  Y +   +  A KLF +M  +D +SW TII GY   G  D A +++ +
Sbjct: 271 AMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQ 322


>ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513593|gb|AES95216.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 907

 Score =  145 bits (367), Expect = 4e-33
 Identities = 72/171 (42%), Positives = 108/171 (63%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           E + LF +MP +N +SW  MISG+ Q G +D A EIFE M  + + +WN+ ITGF QNG 
Sbjct: 377 EALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGL 436

Query: 184 DKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNA 363
             +AL     M  E    D +TF+  LS+C  L ++  G ++H  +++ G  +DL ++NA
Sbjct: 437 YLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNA 496

Query: 364 LIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           LI  Y+KCG ++ A K+F  ++  DLISWN++I GYA++GY + A   FE+
Sbjct: 497 LIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQ 547



 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 28/200 (14%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRK-TIAAWNATITGFTQN 177
           +E  KLFD M +R+  SW +MI+ + +KG+++ A E+FE +P K   A WNA I G+ + 
Sbjct: 96  EEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELFELVPDKLDTACWNAMIAGYAKK 155

Query: 178 GKDKEALILFRKMQDEHTGADLTTFSAILS----------ACGALTSMLQGMEIHANVIR 327
           G+  +A  +F KM  +    DL +++++L+          A      M +   +  N++ 
Sbjct: 156 GRFDDAEKVFEKMPVK----DLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMV 211

Query: 328 DGCQSDLSLTNA-----------------LIHFYSKCGDIKIARKLFDRMKRRDLISWNT 456
            G  ++  L +A                 ++  +++ G I  ARKLFDRM  ++++SWN 
Sbjct: 212 AGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNA 271

Query: 457 IIPGYAMHGYGDVAIKLFEE 516
           +I  Y      D A+KLF+E
Sbjct: 272 MIAAYVQDLQIDEAVKLFKE 291



 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 53/170 (31%), Positives = 84/170 (49%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           E  KLFD MP +N +SW  MI+ + Q   +D A ++F++ P K   +W   I G+ + GK
Sbjct: 253 EARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGK 312

Query: 184 DKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNA 363
             EA  ++ +M  +   A     S ++   G +    Q       V     + D    N+
Sbjct: 313 LDEAREVYNQMPYKDVAAKTALMSGLIQN-GRIDEASQ-------VFSQLNKRDAICWNS 364

Query: 364 LIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFE 513
           +I  Y + G +  A  LF +M  ++ +SWNT+I GYA  G  D A ++FE
Sbjct: 365 MIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFE 414



 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 46/168 (27%), Positives = 91/168 (54%)
 Frame = +1

Query: 13  KLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKE 192
           +LF+++P  N +SW+ M+ GF + G +  A ++F++MP K + +WNA I  + Q+ +  E
Sbjct: 225 ELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDE 284

Query: 193 ALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIH 372
           A+ LF+    E    D  +++ +++    +  + +  E++  +       D++   AL+ 
Sbjct: 285 AVKLFK----ETPYKDCVSWTTMINGYVRVGKLDEAREVYNQM----PYKDVAAKTALMS 336

Query: 373 FYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
              + G I  A ++F ++ +RD I WN++I GY   G    A+ LF +
Sbjct: 337 GLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQ 384



 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 47/160 (29%), Positives = 89/160 (55%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           E +KLF E P ++ +SW  MI+G+ + G +D A E++ +MP K +AA  A ++G  QNG+
Sbjct: 284 EAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGR 343

Query: 184 DKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNA 363
             EA  +F ++       D   ++++++       M + +    N+ R     +    N 
Sbjct: 344 IDEASQVFSQLNKR----DAICWNSMIAGYCQSGRMSEAL----NLFRQMPVKNAVSWNT 395

Query: 364 LIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHG 483
           +I  Y++ G++  A ++F+ M  R++ISWN++I G+  +G
Sbjct: 396 MISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNG 435



 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 51/171 (29%), Positives = 91/171 (53%), Gaps = 1/171 (0%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           E  ++F  +  +N  ++  M++ F + G V  A ++F+KM ++ + +WN  I G+  N  
Sbjct: 35  EAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNM 94

Query: 184 DKEALILFRKMQDEHTGADLTTFS-AILSACGALTSMLQGMEIHANVIRDGCQSDLSLTN 360
            +EA  LF  M      A+   FS A++  C     ML+       ++ D  + D +  N
Sbjct: 95  VEEAHKLFDLM------AERDNFSWALMITCYTRKGMLEKARELFELVPD--KLDTACWN 146

Query: 361 ALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFE 513
           A+I  Y+K G    A K+F++M  +DL+S+N+++ GY  +G   +A+K FE
Sbjct: 147 AMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFE 197



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 49/171 (28%), Positives = 90/171 (52%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           +  +LFD+M QRN +SW  MI+G+    +V+ A ++F+ M  +   +W   IT +T+ G 
Sbjct: 66  DARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGM 125

Query: 184 DKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNA 363
            ++A  LF  + D+    D   ++A+++   A        E    V       DL   N+
Sbjct: 126 LEKARELFELVPDK---LDTACWNAMIAGY-AKKGRFDDAE---KVFEKMPVKDLVSYNS 178

Query: 364 LIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           ++  Y++ G + +A K F+RM  R+++SWN ++ G+  +     A +LFE+
Sbjct: 179 MLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEK 229


>gb|EPS72493.1| hypothetical protein M569_02262, partial [Genlisea aurea]
          Length = 452

 Score =  145 bits (366), Expect = 5e-33
 Identities = 72/174 (41%), Positives = 105/174 (60%), Gaps = 3/174 (1%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNG 180
           Q   KLFDEMP++N ++W  ++ GF ++G VD A  +F +MP +   +W   I G  QNG
Sbjct: 124 QNAKKLFDEMPEKNAVTWNTLLLGFFRQGDVDGARGVFNEMPWRNTVSWTTMIVGCAQNG 183

Query: 181 KDKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIR---DGCQSDLS 351
           + KEAL  FR M  E+   D  T   +LSAC  L  +  G  +H+ V++   +  Q  +S
Sbjct: 184 RSKEALAFFRMMVLENIEFDQVTLVGVLSACAELGDLRLGKWVHSYVLQSFVNKTQLLIS 243

Query: 352 LTNALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFE 513
           L N+LIH Y+ CG+I  A  +F  MK+R  +SW ++I  +A HGYGDVAI +F+
Sbjct: 244 LQNSLIHMYASCGEINAAFDIFRSMKQRTTVSWTSMITAFAKHGYGDVAISMFQ 297



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 41/144 (28%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
 Frame = +1

Query: 100 AFEIFEKMPRKTIAAWNATITGFTQNGKDKEALILFRKMQDEHTGADLTTFSAILSACGA 279
           A ++F+++P ++   WN  I G    G  + ++ LF +M+      D  T++ + + C  
Sbjct: 20  ACKVFDRVPNRSCTLWNQIIRGHLAAGNHRNSVELFIQMERSDVQPDGHTYTYVTNGCTK 79

Query: 280 LTSMLQGMEIHANVIRDGCQSDLSLTNALIHFYSKC-----GDIKIARKLFDRMKRRDLI 444
                 G +IH  +++ G  SD+ +  +L+ FY KC     G ++ A+KLFD M  ++ +
Sbjct: 80  GGYWGLGGQIHGKILKGGICSDIYVCTSLVDFYVKCCAGAFGGVQNAKKLFDEMPEKNAV 139

Query: 445 SWNTIIPGYAMHGYGDVAIKLFEE 516
           +WNT++ G+   G  D A  +F E
Sbjct: 140 TWNTLLLGFFRQGDVDGARGVFNE 163


>ref|XP_006348632.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Solanum tuberosum]
          Length = 746

 Score =  145 bits (365), Expect = 7e-33
 Identities = 66/169 (39%), Positives = 108/169 (63%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           E  K+F+E+P+RN + +  MI GF + G+V  +  +F+ MP +   +W   ITG TQNG 
Sbjct: 194 EAEKVFNELPERNVVMYNTMIMGFLRSGMVRESKSLFQDMPERDSISWTTMITGLTQNGL 253

Query: 184 DKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNA 363
           D+EAL+LFR+M+ E    D  TF +IL+ACG L ++ +G ++HA ++R     ++ + +A
Sbjct: 254 DREALVLFRRMRLEGLPIDQFTFGSILTACGGLWAIEEGKQLHAYIVRTYHSENVFVGSA 313

Query: 364 LIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLF 510
           L+  YSKC +IK A   F RM  ++++SW  ++ GY  +G+ + A+K F
Sbjct: 314 LVDMYSKCRNIKYAETSFCRMPNKNIVSWTAMVVGYGQNGFSEEAVKAF 362



 Score =  107 bits (266), Expect = 2e-21
 Identities = 50/142 (35%), Positives = 80/142 (56%)
 Frame = +1

Query: 91  VDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKEALILFRKMQDEHTGADLTTFSAILSA 270
           + +A   F +MP K I +W A + G+ QNG  +EA+  F  MQ      D  T  +++S+
Sbjct: 324 IKYAETSFCRMPNKNIVSWTAMVVGYGQNGFSEEAVKAFCDMQRNGVEPDDFTLGSVISS 383

Query: 271 CGALTSMLQGMEIHANVIRDGCQSDLSLTNALIHFYSKCGDIKIARKLFDRMKRRDLISW 450
           C  L S+ +G + H   +  G  S ++++NAL+  Y KCG I+++ +LFD M  +D +SW
Sbjct: 384 CANLASLEEGAQFHGRALVSGLISFITVSNALVTLYGKCGSIEVSHRLFDEMSVKDEVSW 443

Query: 451 NTIIPGYAMHGYGDVAIKLFEE 516
             ++ GYA  G     I LFE+
Sbjct: 444 TALVSGYAQFGKATETIHLFEK 465



 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 44/169 (26%), Positives = 91/169 (53%), Gaps = 1/169 (0%)
 Frame = +1

Query: 13  KLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKE 192
           ++F+E+PQ N+ SW  ++S + + G +    ++F +MP++   + N  I+G+   G   +
Sbjct: 64  QVFEEIPQPNQFSWNTILSVYSKSGNLSRMLDVFNRMPKRDGVSCNLIISGYASRGLAID 123

Query: 193 ALILFRKM-QDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALI 369
           AL  ++ M +D     +  TFS +L        +    +IH  +++ G +S + + + L+
Sbjct: 124 ALEAYKLMLEDGGMSLNRITFSTMLILSSDNGWIRMSRQIHGQIVKWGFESYVFVGSPLV 183

Query: 370 HFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
             Y+K G I  A K+F+ +  R+++ +NT+I G+   G    +  LF++
Sbjct: 184 DMYAKAGFIYEAEKVFNELPERNVVMYNTMIMGFLRSGMVRESKSLFQD 232


>ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g35030, mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  145 bits (365), Expect = 7e-33
 Identities = 71/174 (40%), Positives = 109/174 (62%), Gaps = 3/174 (1%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           E  KLF++MP+R   SW  MI+GF Q G ++ A + F KM  K +  W A I+G  Q+G+
Sbjct: 271 EAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGR 330

Query: 184 DKEALILFRKMQ-DEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTN 360
            +EAL +F +MQ   +   +  TF ++L AC  L ++ +G +IH  + +   Q    + +
Sbjct: 331 SEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVS 390

Query: 361 ALIHFYSKCGDIKIARKLFD--RMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           ALI+ YSKCG++++ARK+FD   +  RD++SWN +I  YA HG+G  AI LF+E
Sbjct: 391 ALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDE 444



 Score =  100 bits (250), Expect = 2e-19
 Identities = 61/172 (35%), Positives = 88/172 (51%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNG 180
           +E  +LFD MP +N ISW  MI G+ +KG +D A ++FE MP + + +WN  IT F Q  
Sbjct: 146 EEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMPERNVVSWNTVITAFMQRR 205

Query: 181 KDKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTN 360
           +  EA  LF +M +     D+ ++          T+M+ G+                   
Sbjct: 206 RVDEAQELFNRMPER----DVISW----------TTMVAGL------------------- 232

Query: 361 ALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
                 SK G I  AR LFD+M  R+++SWNT+I GYA +   D A KLFE+
Sbjct: 233 ------SKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQ 278



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 45/155 (29%), Positives = 75/155 (48%)
 Frame = +1

Query: 49  SWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKEALILFRKMQDEH 228
           +W++   G  ++G +  A ++FE+MP + + +W A ITG+ + G  +EA  LF +     
Sbjct: 70  NWLITQLG--KEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDR----- 122

Query: 229 TGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIHFYSKCGDIKIAR 408
                                            D  ++ ++ T AL+  Y +   I+ AR
Sbjct: 123 --------------------------------NDAIKNVVTWT-ALVSGYVRWNRIEEAR 149

Query: 409 KLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFE 513
           +LFD M  +++ISWNT+I GYA  G+ D A+ LFE
Sbjct: 150 RLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFE 184


>ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  145 bits (365), Expect = 7e-33
 Identities = 71/174 (40%), Positives = 109/174 (62%), Gaps = 3/174 (1%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           E  KLF++MP+R   SW  MI+GF Q G ++ A + F KM  K +  W A I+G  Q+G+
Sbjct: 271 EAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGR 330

Query: 184 DKEALILFRKMQ-DEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTN 360
            +EAL +F +MQ   +   +  TF ++L AC  L ++ +G +IH  + +   Q    + +
Sbjct: 331 SEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVS 390

Query: 361 ALIHFYSKCGDIKIARKLFD--RMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           ALI+ YSKCG++++ARK+FD   +  RD++SWN +I  YA HG+G  AI LF+E
Sbjct: 391 ALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDE 444



 Score =  103 bits (256), Expect = 3e-20
 Identities = 62/172 (36%), Positives = 89/172 (51%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNG 180
           +E  +LFD MP +N ISW  MI G+ +KG +D A ++FEKMP + + +WN  IT F Q  
Sbjct: 146 EEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMPERNVVSWNTVITAFMQRR 205

Query: 181 KDKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTN 360
           +  EA  LF +M +     D+ ++          T+M+ G+                   
Sbjct: 206 RVDEAQELFNRMPER----DVISW----------TTMVAGL------------------- 232

Query: 361 ALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
                 SK G I  AR LFD+M  R+++SWNT+I GYA +   D A KLFE+
Sbjct: 233 ------SKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQ 278



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 45/156 (28%), Positives = 76/156 (48%)
 Frame = +1

Query: 49  SWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKEALILFRKMQDEH 228
           +W++   G  ++G +  A ++FE+MP + + +W A ITG+ + G  +EA  LF +     
Sbjct: 70  NWLITQLG--KEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDR----- 122

Query: 229 TGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIHFYSKCGDIKIAR 408
                                            D  ++ ++ T AL+  Y +   I+ AR
Sbjct: 123 --------------------------------NDAIKNVVTWT-ALVSGYVRWNRIEEAR 149

Query: 409 KLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           +LFD M  +++ISWNT+I GYA  G+ D A+ LFE+
Sbjct: 150 RLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEK 185


>gb|EOY21263.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|508774008|gb|EOY21264.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508774009|gb|EOY21265.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 768

 Score =  144 bits (364), Expect = 9e-33
 Identities = 67/167 (40%), Positives = 108/167 (64%)
 Frame = +1

Query: 13  KLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKE 192
           KLFD+MP RN  S   +I+G+ Q G + HA E+F++MPR+   +W A I G+ Q+G D+E
Sbjct: 320 KLFDKMPCRNVTSLNTIITGYAQSGEIAHARELFDRMPRRDPVSWAAMIAGYAQSGYDEE 379

Query: 193 ALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIH 372
           AL LF +M+ +    + ++F+  LS C  + ++  G ++H  +++ G +S   + NAL+ 
Sbjct: 380 ALCLFVEMKRDGERLNRSSFACALSTCAHIAALEMGKQLHGRLVKAGYESGSFVGNALLL 439

Query: 373 FYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFE 513
            Y KCG I+ A   F+ +  +D++SWNT+I GYA HG+G  A+K+FE
Sbjct: 440 MYCKCGGIEEACSAFEEIMEKDVVSWNTMIAGYARHGFGKEALKVFE 486



 Score =  103 bits (257), Expect = 2e-20
 Identities = 64/168 (38%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
 Frame = +1

Query: 16  LFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKEA 195
           LFDEMP+R+ +SW VMISG  +   V  A E+FE+MP + + +WNA ++G+ QNG   +A
Sbjct: 104 LFDEMPERDLVSWNVMISGCVRNNNVAAAKELFEQMPERDVVSWNAMLSGYAQNGCVDKA 163

Query: 196 LILFRKMQDEHTGADLTTFSAILSACGALTSMLQG-MEIHANVIRDGCQSDLSLTNALIH 372
             +F +M  +++     +++A+L+     T +  G ME    +       DL   N L+ 
Sbjct: 164 RKIFDRMPTKNS----ISWNALLA-----TYVQNGRMEEACTLFESKADWDLVSWNCLMG 214

Query: 373 FYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
            + K      AR++FDR+  RD ISWNTII GYA +G  + A +LF E
Sbjct: 215 GFVKTKRFIDARRIFDRIPFRDKISWNTIITGYAQNGEIEEARRLFHE 262



 Score =  102 bits (254), Expect = 5e-20
 Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 1/169 (0%)
 Frame = +1

Query: 13  KLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKE 192
           +LF++MP+R+ +SW  M+SG+ Q G VD A +IF++MP K   +WNA +  + QNG+ +E
Sbjct: 134 ELFEQMPERDVVSWNAMLSGYAQNGCVDKARKIFDRMPTKNSISWNALLATYVQNGRMEE 193

Query: 193 ALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANV-IRDGCQSDLSLTNALI 369
           A  LF    D     DL +++ ++         +    I   +  RD         N +I
Sbjct: 194 ACTLFESKAD----WDLVSWNCLMGGFVKTKRFIDARRIFDRIPFRDKIS-----WNTII 244

Query: 370 HFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
             Y++ G+I+ AR+LF     RD+ +W  ++ GY  +G  D A + FEE
Sbjct: 245 TGYAQNGEIEEARRLFHESPVRDVFTWTAMVSGYVQNGMVDKAREFFEE 293



 Score =  102 bits (254), Expect = 5e-20
 Identities = 62/172 (36%), Positives = 84/172 (48%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNG 180
           +E  +LF E P R+  +W  M+SG+ Q G+VD A E FE+MP K   +WNA I G+ Q  
Sbjct: 254 EEARRLFHESPVRDVFTWTAMVSGYVQNGMVDKAREFFEEMPEKNAVSWNAMIAGYVQCK 313

Query: 181 KDKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTN 360
           +   A  LF KM                  C  +TS+                      N
Sbjct: 314 RMDMARKLFDKM-----------------PCRNVTSL----------------------N 334

Query: 361 ALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
            +I  Y++ G+I  AR+LFDRM RRD +SW  +I GYA  GY + A+ LF E
Sbjct: 335 TIITGYAQSGEIAHARELFDRMPRRDPVSWAAMIAGYAQSGYDEEALCLFVE 386



 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 46/154 (29%), Positives = 81/154 (52%)
 Frame = +1

Query: 52  WIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKEALILFRKMQDEHT 231
           W + IS   +   +D A  +F  MPR++  ++NA I+G+  N K +    L R + DE  
Sbjct: 54  WNLAISTHMRNAQLDSALRVFNSMPRRSSVSYNAMISGYLMNDKFE----LARNLFDEMP 109

Query: 232 GADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIHFYSKCGDIKIARK 411
             DL +++ ++S C    ++    E+   +     + D+   NA++  Y++ G +  ARK
Sbjct: 110 ERDLVSWNVMISGCVRNNNVAAAKELFEQM----PERDVVSWNAMLSGYAQNGCVDKARK 165

Query: 412 LFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFE 513
           +FDRM  ++ ISWN ++  Y  +G  + A  LFE
Sbjct: 166 IFDRMPTKNSISWNALLATYVQNGRMEEACTLFE 199



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
 Frame = +1

Query: 73  FCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKEALILFRKMQDEHTGADLTTF 252
           +C+ G ++ A   FE++  K + +WN  I G+ ++G  KEAL +F  M+      D TT 
Sbjct: 441 YCKCGGIEEACSAFEEIMEKDVVSWNTMIAGYARHGFGKEALKVFESMKAAGVKPDDTTM 500

Query: 253 SAILSACGALTSMLQGMEIHANVIRD-GCQSDLSLTNALIHFYSKCGDIKIARKLFDRMK 429
             +LSAC     + +G E    + +D   +++      ++    + G +  A KL   M 
Sbjct: 501 VGVLSACSHAGLVDRGREYFYCMNQDYAIKANSRHYTCMVDLLGRAGRLDEALKLIRNMP 560

Query: 430 -RRDLISWNTIIPGYAMHG 483
              D  +W  ++    +HG
Sbjct: 561 FEPDAATWGALLGASRIHG 579


>ref|XP_004504105.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cicer arietinum]
          Length = 569

 Score =  144 bits (363), Expect = 1e-32
 Identities = 68/164 (41%), Positives = 108/164 (65%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNG 180
           +E  +LF +MPQ+N ++   MI+GFC++G VD A+ +F+++  + IA+WN  ITG+ QNG
Sbjct: 202 EEAWELFVKMPQKNVVACTAMITGFCKQGKVDEAWNLFQQISCRDIASWNIMITGYAQNG 261

Query: 181 KDKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTN 360
           + +EAL LF +M       D  TF ++ +AC +L  + +G + +A V++ G  SDLS++N
Sbjct: 262 RGEEALNLFSQMVRTGMQPDDLTFVSLFTACASLALLEEGRQTNALVVKHGFDSDLSVSN 321

Query: 361 ALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGD 492
           AL+  YSKCG+I  +   F ++   D++SWNTII  +A HG  D
Sbjct: 322 ALVTMYSKCGEIVKSELAFGQISHPDIVSWNTIIAAFAQHGLYD 365



 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 24/196 (12%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNG 180
           Q    LF  MP +N +SW  +I+   Q   ++ AF+ F  MP K  A++NA I+GF +NG
Sbjct: 77  QHSKSLFQSMPHKNVVSWNSIITACVQNNNINDAFKYFTAMPEKNAASYNAMISGFVKNG 136

Query: 181 KDKEALILFRKMQDEHTGADLTTF-------SAILSACGALTSMLQGMEIHANVIRDGC- 336
             ++A  LF +M   +  +            + I  A     +M    E+   V+  G  
Sbjct: 137 HVEQAQKLFEEMPRPNVVSYTVMIDGYAKMENGIKRAKALFDAMPFRNEVSWTVMISGLV 196

Query: 337 ----------------QSDLSLTNALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPG 468
                           Q ++    A+I  + K G +  A  LF ++  RD+ SWN +I G
Sbjct: 197 ENGLYEEAWELFVKMPQKNVVACTAMITGFCKQGKVDEAWNLFQQISCRDIASWNIMITG 256

Query: 469 YAMHGYGDVAIKLFEE 516
           YA +G G+ A+ LF +
Sbjct: 257 YAQNGRGEEALNLFSQ 272



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 1/166 (0%)
 Frame = +1

Query: 16  LFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKEA 195
           LFD+   ++ ++W  M++ + Q GL+ H+  +F+ MP K + +WN+ IT   QN    +A
Sbjct: 51  LFDKTSTKDIVTWNSMLTAYWQNGLLQHSKSLFQSMPHKNVVSWNSIITACVQNNNINDA 110

Query: 196 LILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIHF 375
              F  M +++      +++A++S       + Q  ++   + R    S       +I  
Sbjct: 111 FKYFTAMPEKNA----ASYNAMISGFVKNGHVEQAQKLFEEMPRPNVVS----YTVMIDG 162

Query: 376 YSKC-GDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLF 510
           Y+K    IK A+ LFD M  R+ +SW  +I G   +G  + A +LF
Sbjct: 163 YAKMENGIKRAKALFDAMPFRNEVSWTVMISGLVENGLYEEAWELF 208



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 36/137 (26%), Positives = 72/137 (52%)
 Frame = +1

Query: 64  ISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKEALILFRKMQDEHTGADL 243
           I+   + G ++ A  +F+K   K I  WN+ +T + QNG  + +  LF+ M  +    ++
Sbjct: 36  ITSLSRAGNINAARHLFDKTSTKDIVTWNSMLTAYWQNGLLQHSKSLFQSMPHK----NV 91

Query: 244 TTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIHFYSKCGDIKIARKLFDR 423
            ++++I++AC    ++    +    +      S     NA+I  + K G ++ A+KLF+ 
Sbjct: 92  VSWNSIITACVQNNNINDAFKYFTAMPEKNAAS----YNAMISGFVKNGHVEQAQKLFEE 147

Query: 424 MKRRDLISWNTIIPGYA 474
           M R +++S+  +I GYA
Sbjct: 148 MPRPNVVSYTVMIDGYA 164


>ref|XP_004244339.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Solanum lycopersicum]
          Length = 626

 Score =  144 bits (363), Expect = 1e-32
 Identities = 70/171 (40%), Positives = 109/171 (63%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           + + LFD+MPQR+ +SW +MI+   +KG VD AF++F KMP + + +W A ITGF    K
Sbjct: 175 DAILLFDKMPQRDVVSWNIMITQLSKKGDVDGAFDLFGKMPERNLRSWTAMITGFVHCVK 234

Query: 184 DKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNA 363
            KEA+ LF +M++    A+  T  A+L+AC  L ++  G  IH    + G + ++ + N 
Sbjct: 235 AKEAIRLFVEMEETGLRANEVTVVAVLAACADLGALDLGRRIHEYSNKSGFRRNVHICNT 294

Query: 364 LIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           LI  Y KCG ++ A+ +FD MK   ++SW+ +I G A+HG+GD A++LF E
Sbjct: 295 LIDMYIKCGCLEAAKAVFDEMKEPTIVSWSAMIQGLAIHGHGDEALELFNE 345



 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 48/137 (35%), Positives = 77/137 (56%)
 Frame = +1

Query: 100 AFEIFEKMPRKTIAAWNATITGFTQNGKDKEALILFRKMQDEHTGADLTTFSAILSACGA 279
           A +IF  + ++ +A WN+ +    +     +A+ LF++M+  +   D  T S +L AC  
Sbjct: 75  AQQIFSSVDQQEVAIWNSCLRNLAEGSSLIDAIFLFQQMRSYNVSLDCFTCSFVLKACVG 134

Query: 280 LTSMLQGMEIHANVIRDGCQSDLSLTNALIHFYSKCGDIKIARKLFDRMKRRDLISWNTI 459
           L  +L+G  +H  + + G QS+L L NAL+H Y+ CG    A  LFD+M +RD++SWN +
Sbjct: 135 LRDLLRGRIVHGYIEKLGFQSNLVLLNALLHLYATCGATDDAILLFDKMPQRDVVSWNIM 194

Query: 460 IPGYAMHGYGDVAIKLF 510
           I   +  G  D A  LF
Sbjct: 195 ITQLSKKGDVDGAFDLF 211


>ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478803|gb|AES60006.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 891

 Score =  144 bits (362), Expect = 2e-32
 Identities = 72/174 (41%), Positives = 106/174 (60%), Gaps = 3/174 (1%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           E +KLF+ MP+R+  SW  M++GF Q G ++ A ++F  MP+K +  W A +TG+ Q+G 
Sbjct: 250 EALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGL 309

Query: 184 DKEALILFRKMQ-DEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTN 360
            +EAL LF KMQ ++       TF  +L AC  L  + +G +IH  + +   Q    + +
Sbjct: 310 SEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVS 369

Query: 361 ALIHFYSKCGDIKIARKLFD--RMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           ALI+ YSKCGD  +A+K+FD       DLI+WN +I  YA HGYG+ AI LF +
Sbjct: 370 ALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAINLFNK 423



 Score =  101 bits (252), Expect = 9e-20
 Identities = 56/171 (32%), Positives = 95/171 (55%), Gaps = 1/171 (0%)
 Frame = +1

Query: 4   EVMKLFDEMP-QRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNG 180
           E  KLFD    Q++ I W  M+SG+ +   ++ A  +F +MP + + +WN  I G+ +NG
Sbjct: 94  EARKLFDRPDAQKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNG 153

Query: 181 KDKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTN 360
           + +EAL LF +M + +  +  T  +A L+ CG +            +  +  + D+    
Sbjct: 154 RTQEALDLFGRMPERNVVSWNTVMTA-LAHCGRIDDA-------ERLFNEMRERDVVSWT 205

Query: 361 ALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFE 513
            ++   SK G +  AR++FD+M  R+++SWN +I GYA +G  D A+KLFE
Sbjct: 206 TMVAGLSKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFE 256



 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 50/168 (29%), Positives = 84/168 (50%)
 Frame = +1

Query: 13  KLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKE 192
           +LF+EM +R+ +SW  M++G  + G VD A E+F+KMP + + +WNA I G+ QNG+  E
Sbjct: 191 RLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDE 250

Query: 193 ALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIH 372
           AL LF +M +                                        D+   N ++ 
Sbjct: 251 ALKLFERMPER---------------------------------------DMPSWNTMVT 271

Query: 373 FYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
            + + GD+  A +LF  M ++++I+W  ++ GY  HG  + A+KLF +
Sbjct: 272 GFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNK 319



 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
 Frame = +1

Query: 1   QEVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNG 180
           +E  +LF+EMP RN +SW  MI G+ + G    A ++F +MP + + +WN  +T     G
Sbjct: 125 EEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTVMTALAHCG 184

Query: 181 KDKEALILFRKMQDEHTGADLTTFSAILSACG---ALTSMLQGMEIHANVIRDGCQSDLS 351
           +  +A  LF +M+ E      TT  A LS  G   A   +   M I  NV+         
Sbjct: 185 RIDDAERLFNEMR-ERDVVSWTTMVAGLSKNGRVDAAREVFDKMPIR-NVVS-------- 234

Query: 352 LTNALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLF 510
             NA+I  Y++ G    A KLF+RM  RD+ SWNT++ G+  +G  + A +LF
Sbjct: 235 -WNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLF 286



 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 46/172 (26%), Positives = 94/172 (54%), Gaps = 1/172 (0%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMP-RKTIAAWNATITGFTQNG 180
           E  K+FDEM +R+   W  MISG+ + GL++ A ++F++   +K++  W A ++G+ +  
Sbjct: 63  EARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSVIVWTAMVSGYIKMN 122

Query: 181 KDKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTN 360
           + +EA  LF +M   +    + +++ ++          + +++   +      S  ++  
Sbjct: 123 RIEEAERLFNEMPVRN----VVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTVMT 178

Query: 361 ALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           AL H    CG I  A +LF+ M+ RD++SW T++ G + +G  D A ++F++
Sbjct: 179 ALAH----CGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDK 226


>ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  143 bits (361), Expect = 2e-32
 Identities = 71/177 (40%), Positives = 109/177 (61%), Gaps = 6/177 (3%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           E  ++FD M  RN +S   M+SG+ +   V  A  +F KM ++ + +WNA I G+TQNG+
Sbjct: 302 EARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGE 361

Query: 184 DKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIR------DGCQSD 345
           ++EAL LFR ++ E       TF  +LSAC  L  +L G + H +V++       G +SD
Sbjct: 362 NEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESD 421

Query: 346 LSLTNALIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLFEE 516
           + + N+LI  Y KCG I+   ++F++MK RD +SWN II GYA +GYG  A+++F +
Sbjct: 422 IFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRK 478



 Score =  122 bits (307), Expect = 4e-26
 Identities = 60/169 (35%), Positives = 97/169 (57%)
 Frame = +1

Query: 4   EVMKLFDEMPQRNEISWIVMISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGK 183
           +  KLFD MPQRN  +W  +IS   + G +D A  +F  MP     +WN+ ++GF Q+ +
Sbjct: 68  DARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDR 127

Query: 184 DKEALILFRKMQDEHTGADLTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNA 363
            +E+L  F KM  E    +  +F + LSAC  L  +  G ++HA V +    +D+ + +A
Sbjct: 128 FEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSA 187

Query: 364 LIHFYSKCGDIKIARKLFDRMKRRDLISWNTIIPGYAMHGYGDVAIKLF 510
           LI  YSKCG +  A ++F  M  R+L++WN++I  Y  +G    A+++F
Sbjct: 188 LIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVF 236



 Score =  103 bits (256), Expect = 3e-20
 Identities = 57/182 (31%), Positives = 95/182 (52%), Gaps = 32/182 (17%)
 Frame = +1

Query: 61  MISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKEALILFRKMQDEHTGAD 240
           +I  + + G V  A E+F  M  + +  WN+ IT + QNG   EAL +F +M D     D
Sbjct: 188 LIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPD 247

Query: 241 LTTFSAILSACGALTSMLQGMEIHANVIR-DGCQSDLSLTNALIHFYSKCGDIKIARKLF 417
             T ++++SAC +L ++ +G++IHA V++ +  + DL L NAL+  Y+KC  +  AR++F
Sbjct: 248 EVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVF 307

Query: 418 DRMK-------------------------------RRDLISWNTIIPGYAMHGYGDVAIK 504
           DRM                                +R+++SWN +I GY  +G  + A++
Sbjct: 308 DRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALR 367

Query: 505 LF 510
           LF
Sbjct: 368 LF 369



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
 Frame = +1

Query: 61  MISGFCQKGLVDHAFEIFEKMPRKTIAAWNATITGFTQNGKDKEALILFRKMQDEHTGAD 240
           +I  + + G ++    +FEKM  +   +WNA I G+ QNG   EAL +FRKM       D
Sbjct: 428 LIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPD 487

Query: 241 LTTFSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIHFYSKCGDIKIARKLFD 420
             T   +L AC     + +G     ++   G          ++    + G +  A+ L +
Sbjct: 488 HVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIE 547

Query: 421 RMK-RRDLISWNTIIPGYAMHG 483
            M    D + W +++    +HG
Sbjct: 548 AMPVNPDAVVWGSLLAACKVHG 569



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/87 (33%), Positives = 46/87 (52%)
 Frame = +1

Query: 250 FSAILSACGALTSMLQGMEIHANVIRDGCQSDLSLTNALIHFYSKCGDIKIARKLFDRMK 429
           F+ +L +C    S      +HA ++      ++ + N LI  Y KC  +  ARKLFDRM 
Sbjct: 18  FAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMP 77

Query: 430 RRDLISWNTIIPGYAMHGYGDVAIKLF 510
           +R+  +WN++I      G+ D A +LF
Sbjct: 78  QRNTFTWNSLISVLTKSGFLDEAARLF 104