BLASTX nr result
ID: Ephedra26_contig00024813
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00024813
(673 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, put... 110 4e-22
gb|EOY02997.1| DNA repair metallo-beta-lactamase family protein ... 109 7e-22
ref|XP_006338813.1| PREDICTED: DNA cross-link repair protein SNM... 105 1e-20
ref|XP_006468937.1| PREDICTED: DNA cross-link repair protein SNM... 104 3e-20
ref|XP_006446878.1| hypothetical protein CICLE_v10015161mg [Citr... 104 3e-20
ref|XP_006844683.1| hypothetical protein AMTR_s00016p00244350 [A... 103 6e-20
gb|EEE60929.1| hypothetical protein OsJ_14663 [Oryza sativa Japo... 103 6e-20
ref|NP_001052690.1| Os04g0401800 [Oryza sativa Japonica Group] g... 103 6e-20
ref|NP_189302.1| DNA cross-link repair protein SNM1 [Arabidopsis... 101 2e-19
emb|CAA66406.1| orf12 [Arabidopsis thaliana] 101 2e-19
dbj|BAH19739.1| AT3G26680 [Arabidopsis thaliana] 101 2e-19
gb|AFW58146.1| hypothetical protein ZEAMMB73_659537 [Zea mays] g... 100 3e-19
ref|NP_001131576.1| uncharacterized protein LOC100192920 [Zea ma... 100 3e-19
gb|ESW33793.1| hypothetical protein PHAVU_001G099100g [Phaseolus... 100 4e-19
ref|XP_002321063.2| hypothetical protein POPTR_0014s13570g [Popu... 99 9e-19
ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago... 99 2e-18
ref|XP_002875331.1| hypothetical protein ARALYDRAFT_484438 [Arab... 99 2e-18
ref|XP_006598988.1| PREDICTED: DNA cross-link repair protein SNM... 98 2e-18
ref|XP_004493109.1| PREDICTED: DNA cross-link repair protein SNM... 98 2e-18
ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM... 98 2e-18
>ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis] gi|223547811|gb|EEF49303.1| DNA cross-link
repair protein pso2/snm1, putative [Ricinus communis]
Length = 493
Score = 110 bits (275), Expect = 4e-22
Identities = 50/66 (75%), Positives = 58/66 (87%)
Frame = +3
Query: 3 GNQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQS 182
G +LDL++PISK N+TIYGVPYSEHSSF ELKEFV+FL+P KIIPTVN GNPT R MQS
Sbjct: 426 GKKLDLIRPISKGNVTIYGVPYSEHSSFTELKEFVEFLKPDKIIPTVNVGNPTNREKMQS 485
Query: 183 HFQQWL 200
HF++WL
Sbjct: 486 HFREWL 491
>gb|EOY02997.1| DNA repair metallo-beta-lactamase family protein isoform 1
[Theobroma cacao]
Length = 461
Score = 109 bits (273), Expect = 7e-22
Identities = 51/66 (77%), Positives = 58/66 (87%)
Frame = +3
Query: 3 GNQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQS 182
GNQLDL++PIS+ N+TIYGVPYSEHSSF EL+EFVQFLRP KIIPTVN GN T R MQS
Sbjct: 394 GNQLDLIRPISRGNVTIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNVGNATNRDKMQS 453
Query: 183 HFQQWL 200
+F+QWL
Sbjct: 454 YFRQWL 459
>ref|XP_006338813.1| PREDICTED: DNA cross-link repair protein SNM1-like [Solanum
tuberosum]
Length = 413
Score = 105 bits (263), Expect = 1e-20
Identities = 50/66 (75%), Positives = 56/66 (84%)
Frame = +3
Query: 3 GNQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQS 182
G L+L+KP SK NITIYGVPYSEHS+FIEL+EFVQFLRP+KIIPTVN GN R MQS
Sbjct: 346 GENLNLIKPTSKGNITIYGVPYSEHSNFIELQEFVQFLRPEKIIPTVNVGNAVNRGKMQS 405
Query: 183 HFQQWL 200
+FQQWL
Sbjct: 406 YFQQWL 411
>ref|XP_006468937.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X1
[Citrus sinensis]
Length = 464
Score = 104 bits (259), Expect = 3e-20
Identities = 49/67 (73%), Positives = 56/67 (83%)
Frame = +3
Query: 3 GNQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQS 182
GNQLDL++P+S+ NITIYGVPYSEHSSF EL+EFVQFLRP KIIPTVN N R MQS
Sbjct: 392 GNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNVWNAASREKMQS 451
Query: 183 HFQQWLS 203
F++WLS
Sbjct: 452 FFREWLS 458
>ref|XP_006446878.1| hypothetical protein CICLE_v10015161mg [Citrus clementina]
gi|557549489|gb|ESR60118.1| hypothetical protein
CICLE_v10015161mg [Citrus clementina]
Length = 464
Score = 104 bits (259), Expect = 3e-20
Identities = 49/67 (73%), Positives = 56/67 (83%)
Frame = +3
Query: 3 GNQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQS 182
GNQLDL++P+S+ NITIYGVPYSEHSSF EL+EFVQFLRP KIIPTVN N R MQS
Sbjct: 392 GNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNVWNAASREKMQS 451
Query: 183 HFQQWLS 203
F++WLS
Sbjct: 452 FFREWLS 458
>ref|XP_006844683.1| hypothetical protein AMTR_s00016p00244350 [Amborella trichopoda]
gi|548847154|gb|ERN06358.1| hypothetical protein
AMTR_s00016p00244350 [Amborella trichopoda]
Length = 479
Score = 103 bits (256), Expect = 6e-20
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +3
Query: 3 GNQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQS 182
G+QLDL+KP SK NITIYGVPYSEHSSF EL++FVQFLRP+KIIPTVN G R M S
Sbjct: 412 GSQLDLIKPNSKGNITIYGVPYSEHSSFTELRDFVQFLRPEKIIPTVNVGKAAARDQMHS 471
Query: 183 HFQQWL 200
HF++WL
Sbjct: 472 HFREWL 477
>gb|EEE60929.1| hypothetical protein OsJ_14663 [Oryza sativa Japonica Group]
Length = 517
Score = 103 bits (256), Expect = 6e-20
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = +3
Query: 3 GNQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQS 182
GNQLDL+KP S+ ITIYGVPYSEHSSF EL+EFV FLRP+K+IPTVN GN R MQ+
Sbjct: 413 GNQLDLIKPSSRGKITIYGVPYSEHSSFSELREFVMFLRPQKVIPTVNVGNAASRDKMQA 472
Query: 183 HFQQWL 200
HF++WL
Sbjct: 473 HFREWL 478
>ref|NP_001052690.1| Os04g0401800 [Oryza sativa Japonica Group]
gi|38345210|emb|CAD40784.2| OSJNBb0012E08.8 [Oryza
sativa Japonica Group] gi|113564261|dbj|BAF14604.1|
Os04g0401800 [Oryza sativa Japonica Group]
gi|116309317|emb|CAH66404.1| OSIGBa0155K12.7 [Oryza
sativa Indica Group]
Length = 481
Score = 103 bits (256), Expect = 6e-20
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = +3
Query: 3 GNQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQS 182
GNQLDL+KP S+ ITIYGVPYSEHSSF EL+EFV FLRP+K+IPTVN GN R MQ+
Sbjct: 413 GNQLDLIKPSSRGKITIYGVPYSEHSSFSELREFVMFLRPQKVIPTVNVGNAASRDKMQA 472
Query: 183 HFQQWL 200
HF++WL
Sbjct: 473 HFREWL 478
>ref|NP_189302.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|30688447|ref|NP_850635.1| DNA cross-link repair
protein SNM1 [Arabidopsis thaliana]
gi|79313637|ref|NP_001030773.1| DNA cross-link repair
protein SNM1 [Arabidopsis thaliana]
gi|73621911|sp|Q38961.1|SNM1_ARATH RecName: Full=DNA
cross-link repair protein SNM1; Short=AtSNM1
gi|1402886|emb|CAA66817.1| hypothetical protein
[Arabidopsis thaliana] gi|11994302|dbj|BAB01732.1|
unnamed protein product [Arabidopsis thaliana]
gi|26449933|dbj|BAC42087.1| unknown protein [Arabidopsis
thaliana] gi|28827378|gb|AAO50533.1| unknown protein
[Arabidopsis thaliana] gi|332643675|gb|AEE77196.1| DNA
cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|332643676|gb|AEE77197.1| DNA cross-link repair
protein SNM1 [Arabidopsis thaliana]
gi|332643677|gb|AEE77198.1| DNA cross-link repair
protein SNM1 [Arabidopsis thaliana]
Length = 484
Score = 101 bits (252), Expect = 2e-19
Identities = 48/66 (72%), Positives = 53/66 (80%)
Frame = +3
Query: 3 GNQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQS 182
G LDL+KP S+ ITIYGVPYSEHSSF EL+EFVQFLRP KIIPTVNNGN R MQS
Sbjct: 417 GEHLDLIKPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNNGNAGTREKMQS 476
Query: 183 HFQQWL 200
F++WL
Sbjct: 477 CFREWL 482
>emb|CAA66406.1| orf12 [Arabidopsis thaliana]
Length = 484
Score = 101 bits (252), Expect = 2e-19
Identities = 48/66 (72%), Positives = 53/66 (80%)
Frame = +3
Query: 3 GNQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQS 182
G LDL+KP S+ ITIYGVPYSEHSSF EL+EFVQFLRP KIIPTVNNGN R MQS
Sbjct: 417 GEHLDLIKPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNNGNAGTREKMQS 476
Query: 183 HFQQWL 200
F++WL
Sbjct: 477 CFREWL 482
>dbj|BAH19739.1| AT3G26680 [Arabidopsis thaliana]
Length = 484
Score = 101 bits (252), Expect = 2e-19
Identities = 48/66 (72%), Positives = 53/66 (80%)
Frame = +3
Query: 3 GNQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQS 182
G LDL+KP S+ ITIYGVPYSEHSSF EL+EFVQFLRP KIIPTVNNGN R MQS
Sbjct: 417 GEHLDLIKPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNNGNAGTREKMQS 476
Query: 183 HFQQWL 200
F++WL
Sbjct: 477 CFREWL 482
>gb|AFW58146.1| hypothetical protein ZEAMMB73_659537 [Zea mays]
gi|413918215|gb|AFW58147.1| hypothetical protein
ZEAMMB73_659537 [Zea mays]
Length = 505
Score = 100 bits (250), Expect = 3e-19
Identities = 45/66 (68%), Positives = 55/66 (83%)
Frame = +3
Query: 3 GNQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQS 182
G LDL+KP S +N+TIYGVPYSEHSSF EL++FV FL+P+KIIPTVN GN T R MQ+
Sbjct: 437 GKHLDLIKPSSNANVTIYGVPYSEHSSFTELRDFVMFLKPQKIIPTVNVGNATSRDKMQA 496
Query: 183 HFQQWL 200
HF++WL
Sbjct: 497 HFREWL 502
>ref|NP_001131576.1| uncharacterized protein LOC100192920 [Zea mays]
gi|194691900|gb|ACF80034.1| unknown [Zea mays]
Length = 280
Score = 100 bits (250), Expect = 3e-19
Identities = 45/66 (68%), Positives = 55/66 (83%)
Frame = +3
Query: 3 GNQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQS 182
G LDL+KP S +N+TIYGVPYSEHSSF EL++FV FL+P+KIIPTVN GN T R MQ+
Sbjct: 212 GKHLDLIKPSSNANVTIYGVPYSEHSSFTELRDFVMFLKPQKIIPTVNVGNATSRDKMQA 271
Query: 183 HFQQWL 200
HF++WL
Sbjct: 272 HFREWL 277
>gb|ESW33793.1| hypothetical protein PHAVU_001G099100g [Phaseolus vulgaris]
Length = 164
Score = 100 bits (249), Expect = 4e-19
Identities = 46/65 (70%), Positives = 54/65 (83%)
Frame = +3
Query: 6 NQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSH 185
N L+L+KP++K NITIYGVPYSEHSSF EL++FVQFLRP KIIPTVN GN R MQS+
Sbjct: 98 NDLELIKPVTKGNITIYGVPYSEHSSFTELRDFVQFLRPDKIIPTVNVGNAANREKMQSY 157
Query: 186 FQQWL 200
F+ WL
Sbjct: 158 FRDWL 162
>ref|XP_002321063.2| hypothetical protein POPTR_0014s13570g [Populus trichocarpa]
gi|550324134|gb|EEE99378.2| hypothetical protein
POPTR_0014s13570g [Populus trichocarpa]
Length = 477
Score = 99.4 bits (246), Expect = 9e-19
Identities = 44/66 (66%), Positives = 56/66 (84%)
Frame = +3
Query: 3 GNQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQS 182
G +LDL++P ++ NITIYGVPYSEHSSF EL++FV+FL+P KIIPTVN GNP R MQS
Sbjct: 410 GRELDLIRPSTRGNITIYGVPYSEHSSFTELRDFVEFLKPDKIIPTVNVGNPDNRDKMQS 469
Query: 183 HFQQWL 200
+F++WL
Sbjct: 470 YFREWL 475
>ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago truncatula]
gi|87241310|gb|ABD33168.1| DNA repair
metallo-beta-lactamase [Medicago truncatula]
gi|355499554|gb|AES80757.1| DNA cross-link repair
protein SNM1 [Medicago truncatula]
Length = 511
Score = 98.6 bits (244), Expect = 2e-18
Identities = 46/66 (69%), Positives = 52/66 (78%)
Frame = +3
Query: 3 GNQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQS 182
GN L L+KP+S NIT YGVPYSEHSSF EL++FVQFLRP KIIPTVN GN R MQS
Sbjct: 444 GNDLALIKPVSNGNITTYGVPYSEHSSFTELRDFVQFLRPDKIIPTVNVGNAANREKMQS 503
Query: 183 HFQQWL 200
+F+ WL
Sbjct: 504 YFRDWL 509
>ref|XP_002875331.1| hypothetical protein ARALYDRAFT_484438 [Arabidopsis lyrata subsp.
lyrata] gi|297321169|gb|EFH51590.1| hypothetical protein
ARALYDRAFT_484438 [Arabidopsis lyrata subsp. lyrata]
Length = 483
Score = 98.6 bits (244), Expect = 2e-18
Identities = 47/66 (71%), Positives = 51/66 (77%)
Frame = +3
Query: 3 GNQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQS 182
G LDL+KP K ITIYGVPYSEHSSF EL+EFVQFLRP KIIPTVNN N R MQS
Sbjct: 416 GEHLDLIKPTCKGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNNANAGTREKMQS 475
Query: 183 HFQQWL 200
F++WL
Sbjct: 476 CFREWL 481
>ref|XP_006598988.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X2
[Glycine max]
Length = 503
Score = 98.2 bits (243), Expect = 2e-18
Identities = 46/65 (70%), Positives = 53/65 (81%)
Frame = +3
Query: 6 NQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSH 185
N L+L+KP+SK NITIYGVPYSEHSSF EL++FVQ LRP KIIPTVN GN R MQS+
Sbjct: 437 NDLELIKPVSKGNITIYGVPYSEHSSFSELQDFVQVLRPDKIIPTVNVGNAANREKMQSY 496
Query: 186 FQQWL 200
F+ WL
Sbjct: 497 FRDWL 501
>ref|XP_004493109.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X1
[Cicer arietinum]
Length = 520
Score = 98.2 bits (243), Expect = 2e-18
Identities = 44/66 (66%), Positives = 53/66 (80%)
Frame = +3
Query: 3 GNQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQS 182
GN L+L++P+S+ NIT YGVPYSEHSSF EL++FVQFLRP KI+PTVN GN R MQS
Sbjct: 453 GNDLELIRPVSRGNITTYGVPYSEHSSFTELRDFVQFLRPDKIVPTVNVGNSANREKMQS 512
Query: 183 HFQQWL 200
+F WL
Sbjct: 513 YFGDWL 518
>ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X1
[Glycine max]
Length = 505
Score = 98.2 bits (243), Expect = 2e-18
Identities = 46/65 (70%), Positives = 53/65 (81%)
Frame = +3
Query: 6 NQLDLLKPISKSNITIYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSH 185
N L+L+KP+SK NITIYGVPYSEHSSF EL++FVQ LRP KIIPTVN GN R MQS+
Sbjct: 439 NDLELIKPVSKGNITIYGVPYSEHSSFSELQDFVQVLRPDKIIPTVNVGNAANREKMQSY 498
Query: 186 FQQWL 200
F+ WL
Sbjct: 499 FRDWL 503