BLASTX nr result

ID: Ephedra26_contig00024737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00024737
         (503 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006840603.1| hypothetical protein AMTR_s00084p00036460 [A...    58   1e-06
ref|XP_006492901.1| PREDICTED: putative vacuolar protein sorting...    57   2e-06
ref|XP_006492899.1| PREDICTED: putative vacuolar protein sorting...    57   2e-06

>ref|XP_006840603.1| hypothetical protein AMTR_s00084p00036460 [Amborella trichopoda]
           gi|548842334|gb|ERN02278.1| hypothetical protein
           AMTR_s00084p00036460 [Amborella trichopoda]
          Length = 3571

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 31/97 (31%), Positives = 51/97 (52%)
 Frame = +1

Query: 172 FFGIIIDMHANHPEQDISIKVAIEPFEFLYDEVWVKGMADLFHMLNACKSHTD*VIISLN 351
           F  + +++       DIS+KV ++PFE   D   +  +     +L + +SH   V+ SL+
Sbjct: 578 FISVQVELLPQKCPHDISVKVVLQPFEAFCDSKLLLSLLYFHSILGSFQSHDHMVLSSLD 637

Query: 352 DFENVVAWILSKDEYIFSNRKRTKFGVNIVNAA*VIP 462
            FENV   +L+K EY+  NR +  + V + NA   IP
Sbjct: 638 GFENVKVRLLTKAEYVLLNRAKVAWDVKLGNATVAIP 674


>ref|XP_006492901.1| PREDICTED: putative vacuolar protein sorting-associated protein
           13B-like isoform X3 [Citrus sinensis]
          Length = 3538

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
 Frame = +1

Query: 208 PEQDI--SIKVAIEPFEFLYDEVWVKGMADLFHMLNACKSHTD*VIISLNDFENVVAWIL 381
           P+QD+  ++KV ++P E + D  +   + D   +L + KS  + V++SLN  E+V A +L
Sbjct: 578 PKQDVEMAVKVMVQPLEAICDSEFFLNIMDFLTVLKSFKSLPERVLLSLNGIEDVKARLL 637

Query: 382 SKDEYIFSNRKRTKFGVNIVNAA*VIPFN--VQNSCSLKAAL 501
           SK  Y+ SNRK+  +  +I      +P+   +   C+L  AL
Sbjct: 638 SKVRYLLSNRKKVIWDFSITTVTIKVPWRNMIMEECNLVLAL 679


>ref|XP_006492899.1| PREDICTED: putative vacuolar protein sorting-associated protein
           13B-like isoform X1 [Citrus sinensis]
          Length = 2649

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
 Frame = +1

Query: 208 PEQDI--SIKVAIEPFEFLYDEVWVKGMADLFHMLNACKSHTD*VIISLNDFENVVAWIL 381
           P+QD+  ++KV ++P E + D  +   + D   +L + KS  + V++SLN  E+V A +L
Sbjct: 578 PKQDVEMAVKVMVQPLEAICDSEFFLNIMDFLTVLKSFKSLPERVLLSLNGIEDVKARLL 637

Query: 382 SKDEYIFSNRKRTKFGVNIVNAA*VIPFN--VQNSCSLKAAL 501
           SK  Y+ SNRK+  +  +I      +P+   +   C+L  AL
Sbjct: 638 SKVRYLLSNRKKVIWDFSITTVTIKVPWRNMIMEECNLVLAL 679


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