BLASTX nr result
ID: Ephedra26_contig00024227
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00024227
(771 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001757072.1| predicted protein [Physcomitrella patens] gi... 259 9e-67
ref|XP_002950389.1| hypothetical protein VOLCADRAFT_104648 [Volv... 150 6e-34
ref|XP_005850317.1| hypothetical protein CHLNCDRAFT_142087 [Chlo... 139 1e-30
gb|AHI07103.1| exodeoxyribonuclease III [Bdellovibrio bacteriovo... 126 7e-27
ref|YP_007024375.1| exodeoxyribonuclease III [Bdellovibrio bacte... 118 3e-24
ref|NP_970256.1| exodeoxyribonuclease III [Bdellovibrio bacterio... 116 7e-24
gb|EFX88187.1| hypothetical protein DAPPUDRAFT_305561 [Daphnia p... 113 8e-23
ref|WP_021657358.1| exodeoxyribonuclease III [Clostridiales bact... 107 4e-21
ref|XP_004606538.1| PREDICTED: DNA-(apurinic or apyrimidinic sit... 104 4e-20
ref|XP_004598385.1| PREDICTED: DNA-(apurinic or apyrimidinic sit... 104 4e-20
ref|XP_006960081.1| DNase I-like protein [Wallemia sebi CBS 633.... 104 4e-20
gb|AHH06593.1| Exodeoxyribonuclease III [Borrelia crocidurae DOU] 103 6e-20
ref|YP_002222178.1| exodeoxyribonuclease III [Borrelia duttonii ... 103 6e-20
ref|YP_001883958.1| exodeoxyribonuclease III [Borrelia hermsii H... 103 8e-20
gb|AHE62849.1| exodeoxyribonuclease III [Borrelia parkeri HR1] g... 102 1e-19
dbj|GAC99363.1| exodeoxyribonuclease III [Pseudozyma hubeiensis ... 102 1e-19
ref|YP_004530293.1| exodeoxyribonuclease III [Treponema primitia... 102 1e-19
ref|YP_945526.1| exodeoxyribonuclease III [Borrelia turicatae 91... 102 1e-19
ref|YP_001357960.1| exodeoxyribonuclease III [Sulfurovum sp. NBC... 102 2e-19
gb|EFW39920.2| apurinic/apyrimidinic endonuclease 2 [Capsaspora ... 101 2e-19
>ref|XP_001757072.1| predicted protein [Physcomitrella patens]
gi|162691943|gb|EDQ78303.1| predicted protein
[Physcomitrella patens]
Length = 536
Score = 259 bits (661), Expect = 9e-67
Identities = 127/252 (50%), Positives = 170/252 (67%), Gaps = 3/252 (1%)
Frame = +3
Query: 9 TDHGSFVLLNVYVPNYGDHSTGRPRLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNIAH 188
TDHGSFVLLNVYVPN GD GRPRL FKM +L+AL+ CD LV SG+ ++IVGDFN+AH
Sbjct: 193 TDHGSFVLLNVYVPNSGDGDKGRPRLDFKMRYLKALEQTCDDLVRSGKHIVIVGDFNVAH 252
Query: 189 KSIDIYKGWNIEEIYSEEERAWMDNFFNDYVDLFRHFHPDEKDIFTNWDMMSEARIHNEG 368
K ID++ W +EEIYS EER W+D F + Y+DL+RHFHPDEK+IF+ WD S+AR NEG
Sbjct: 253 KDIDVHSRWKVEEIYSLEEREWLDGFLSRYIDLYRHFHPDEKNIFSVWDQKSDARTRNEG 312
Query: 369 QRIDYAACSKGFLDEVIDAEIVKMVPKNWSDHASIVLTLKDQPTLPEHPAPAISSRSMKK 548
RIDYA C++GFL EV++ +IVKM K WSDHA++V+TLK+QP LP HPAPA+SS +MK+
Sbjct: 313 LRIDYAICNEGFLTEVLETDIVKM-QKQWSDHAAVVVTLKEQPNLPPHPAPALSSCNMKR 371
Query: 549 FKEQNRITSFLVKPKPLAILSSKNEISNENQQSLC---VTNTDGGDLLERSASEQSMLEL 719
F+ P+ + + N+ N ++ + +G +L +S L +
Sbjct: 372 ---------FIADPRQKKLTALFNKCPNRQVTTIVSDKIVEDEGDELHSKSEMSIDALSM 422
Query: 720 ACDNTKQEQDRV 755
D T++ V
Sbjct: 423 QKDVTRKSNTPV 434
>ref|XP_002950389.1| hypothetical protein VOLCADRAFT_104648 [Volvox carteri f.
nagariensis] gi|300264394|gb|EFJ48590.1| hypothetical
protein VOLCADRAFT_104648 [Volvox carteri f.
nagariensis]
Length = 1732
Score = 150 bits (378), Expect = 6e-34
Identities = 85/209 (40%), Positives = 122/209 (58%), Gaps = 11/209 (5%)
Frame = +3
Query: 3 VETDHGSFVLLNVYVPNYGDHSTGRPRLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNI 182
V TDHG+FVLLNVYVPN GD R RL +K+AFLRAL+ + D L GR+V++VGD NI
Sbjct: 127 VLTDHGAFVLLNVYVPNAGDRPE-RARLPYKLAFLRALRTKMDELTALGRQVVLVGDLNI 185
Query: 183 AHKSIDIYKGWNIEEIYSEEERAWMDNFFNDYVDLFRHFHPDEKDIFTNWDMMSEARIHN 362
A + D++ + + +Y ++E A + Y D++RH HPD + +T WD + AR N
Sbjct: 186 AAERRDVHPTLDFDSMYDKQELAELSGLIAAYPDVWRHLHPDTEGSYTVWDERTSARAFN 245
Query: 363 EGQRIDYAACSKGFLDEVIDAEIV--KMVPKNWSDHASIVLTLKDQPTL-PE-------- 509
G RIDY S G L V EI+ +P WSDHA+I+LTL+ Q + PE
Sbjct: 246 TGLRIDYVLVSPGLLPYVQSCEILTAAAIPPKWSDHAAILLTLRVQRAVEPESASEQALP 305
Query: 510 HPAPAISSRSMKKFKEQNRITSFLVKPKP 596
P P++++ K +E ++ L++ P
Sbjct: 306 RPLPSVAAMVEKGEEEMRQLRPQLLQTAP 334
>ref|XP_005850317.1| hypothetical protein CHLNCDRAFT_142087 [Chlorella variabilis]
gi|307109978|gb|EFN58215.1| hypothetical protein
CHLNCDRAFT_142087 [Chlorella variabilis]
Length = 483
Score = 139 bits (349), Expect = 1e-30
Identities = 76/204 (37%), Positives = 117/204 (57%), Gaps = 18/204 (8%)
Frame = +3
Query: 9 TDHGSFVLLNVYVPNYGDHSTGRPRLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNIAH 188
TDHG+FVL+NVYVPN GD RPRL +K+ FL AL+ +C+ L +GRE+L+VGDFN+
Sbjct: 110 TDHGAFVLVNVYVPNAGDRPD-RPRLHYKLRFLAALRRKCEELAVAGRELLLVGDFNVPA 168
Query: 189 KSIDIYK----GWNIEEIYSEEERAWMDNFFNDYVDLFRHFHPDEKDIFTNWDMMSEARI 356
++ D++ G +++E+Y +EERA + Y D++R HP E ++ W+ + AR
Sbjct: 169 EARDVHPDLLPGGSLDELYGQEERAALHALTAAYPDVWRRLHPQEAATYSVWNEKTSARA 228
Query: 357 HNEGQRIDYAACSKGFLDEVIDAEIV--KMVPKNW------------SDHASIVLTLKDQ 494
N G RIDY C+ G L V+ EI+ +++P N ++L L+D
Sbjct: 229 FNRGLRIDYVLCTPGLLGRVVSCEILGPEVLPPNRPCAPCHSGRYCPPPAPGMLLKLRDV 288
Query: 495 PTLPEHPAPAISSRSMKKFKEQNR 566
P LP HP R ++F + ++
Sbjct: 289 PPLPPHPPCQEWQRLHRRFVDTSQ 312
>gb|AHI07103.1| exodeoxyribonuclease III [Bdellovibrio bacteriovorus W]
Length = 276
Score = 126 bits (317), Expect = 7e-27
Identities = 66/165 (40%), Positives = 99/165 (60%), Gaps = 3/165 (1%)
Frame = +3
Query: 3 VETDHGSFVLLNVYVPNYGDHSTGRPRLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNI 182
V TDHG F L N+Y PN G +G R FK FL+ L + + +GR+V++VGD+N+
Sbjct: 116 VMTDHGEFDLYNIYFPNGG---SGLERHNFKQQFLKDLNKHLEAKLATGRQVIVVGDYNV 172
Query: 183 AHKSIDIYKGWNI--EEIYSEEERAWMDNFFN-DYVDLFRHFHPDEKDIFTNWDMMSEAR 353
AH++ID++ + E + EERAW D+F + ++D FR+FHP ++ F+ WD AR
Sbjct: 173 AHENIDVHDPIRLSKESGFLPEERAWFDSFLDLGFIDTFRYFHPQAQERFSWWDYRKLAR 232
Query: 354 IHNEGQRIDYAACSKGFLDEVIDAEIVKMVPKNWSDHASIVLTLK 488
I N G RIDY SKG ++ A+++ V SDH +++ LK
Sbjct: 233 ISNRGWRIDYVCVSKGLEKNLVSADVLDQV--EGSDHCPVLVNLK 275
>ref|YP_007024375.1| exodeoxyribonuclease III [Bdellovibrio bacteriovorus str. Tiberius]
gi|504905414|ref|WP_015092516.1| exodeoxyribonuclease
III [Bdellovibrio bacteriovorus]
gi|425862072|gb|AFY03108.1| exodeoxyribonuclease III
[Bdellovibrio bacteriovorus str. Tiberius]
Length = 271
Score = 118 bits (295), Expect = 3e-24
Identities = 63/164 (38%), Positives = 96/164 (58%), Gaps = 3/164 (1%)
Frame = +3
Query: 3 VETDHGSFVLLNVYVPNYGDHSTGRPRLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNI 182
+ +DHG F L N+Y PN G +G R FK FL+ L + + +GR++++VGD+N+
Sbjct: 111 IVSDHGPFDLYNIYFPNGG---SGDVRHNFKQQFLKDLNVHLKEKLATGRQIVVVGDYNV 167
Query: 183 AHKSIDIYKGWNIEEI--YSEEERAWMDNFFN-DYVDLFRHFHPDEKDIFTNWDMMSEAR 353
AH++ID++ + ++ + EERAW D+F + ++D FR+F P E ++ WD AR
Sbjct: 168 AHEAIDVHDPVRLSKVSGFFPEERAWFDSFVDLGFIDTFRYFKPSEAKRYSWWDYRQMAR 227
Query: 354 IHNEGQRIDYAACSKGFLDEVIDAEIVKMVPKNWSDHASIVLTL 485
I N G RIDY SKG + A+I+ V SDH +V TL
Sbjct: 228 ISNRGWRIDYICISKGLEKYLASADILDQV--EGSDHCPVVATL 269
>ref|NP_970256.1| exodeoxyribonuclease III [Bdellovibrio bacteriovorus HD100]
gi|499479213|ref|WP_011165853.1| exodeoxyribonuclease
III [Bdellovibrio bacteriovorus]
gi|39577087|emb|CAE78316.1| Exodeoxyribonuclease III
[Bdellovibrio bacteriovorus HD100]
Length = 285
Score = 116 bits (291), Expect = 7e-24
Identities = 64/162 (39%), Positives = 94/162 (58%), Gaps = 3/162 (1%)
Frame = +3
Query: 9 TDHGSFVLLNVYVPNYGDHSTGRPRLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNIAH 188
+DHG F L N+Y PN G +G R FK FL+ L + +GR+V++VGD+N+AH
Sbjct: 127 SDHGPFDLYNIYFPNGG---SGDVRHNFKQQFLKDLNHHLKEKLATGRQVVVVGDYNVAH 183
Query: 189 KSIDIYKGWNIEEI--YSEEERAWMDNFFN-DYVDLFRHFHPDEKDIFTNWDMMSEARIH 359
++ID++ + ++ + EERAW D+F + ++D FR+F P E ++ WD ARI
Sbjct: 184 EAIDVHDPVRLSKVSGFFPEERAWFDSFVDLGFIDTFRYFKPSEAKRYSWWDYRQMARIS 243
Query: 360 NEGQRIDYAACSKGFLDEVIDAEIVKMVPKNWSDHASIVLTL 485
N G RIDY SKG + A+I+ V SDH +V TL
Sbjct: 244 NRGWRIDYICVSKGLEKYLASADILDQV--EGSDHCPVVATL 283
>gb|EFX88187.1| hypothetical protein DAPPUDRAFT_305561 [Daphnia pulex]
Length = 476
Score = 113 bits (282), Expect = 8e-23
Identities = 72/214 (33%), Positives = 116/214 (54%), Gaps = 5/214 (2%)
Frame = +3
Query: 21 SFVLLNVYVPNYGDHSTGRPRLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNIAHKSID 200
S V++NVY PN G++ RL +K+ F RAL LRC ++ G V+++GD N++H+ ID
Sbjct: 136 SLVVINVYCPNAGENDE---RLPYKLEFYRALNLRCHDFLSQGYYVIVLGDMNVSHRLID 192
Query: 201 IYKGWNIEEIYSEEERAWMDNFFND----YVDLFRHFHPDEKDIFTNWDMMSEARIHNEG 368
+ ++ R W+D F ++ +VD FRH +P ++ FT W+ AR++N G
Sbjct: 193 HCEPEDVSSFPKSPSRLWLDGFLHEGGGKFVDSFRHLYPTKEKAFTCWNTKLSARVNNYG 252
Query: 369 QRIDYAACSKGFLDEVIDAEIVKMVPKNWSDHASIVLTLKDQPTLPEHPAPAISSRSMKK 548
RIDY S D + D I+ V SDH + +L +P PA+ ++ K+
Sbjct: 253 TRIDYILLSNQLTDALQDCIIMSDV--YGSDHCPVKSSLA-LDIIPSTKLPALCTKFFKE 309
Query: 549 FK-EQNRITSFLVKPKPLAILSSKNEISNENQQS 647
F +Q ++++F K + LA+ S NEI E + S
Sbjct: 310 FSGKQLKMSTFFCK-RTLAVEPS-NEIHGEPEGS 341
>ref|WP_021657358.1| exodeoxyribonuclease III [Clostridiales bacterium oral taxon 876]
gi|542994845|gb|ERI90173.1| exodeoxyribonuclease III
[Clostridiales bacterium oral taxon 876 str. F0540]
Length = 256
Score = 107 bits (267), Expect = 4e-21
Identities = 66/167 (39%), Positives = 92/167 (55%), Gaps = 3/167 (1%)
Frame = +3
Query: 3 VETDHGSFVLLNVYVPNYGDHSTGRPRLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNI 182
+ET+ +F LLN+Y PN RL +KM F AL C+ LV G++++I GD+N
Sbjct: 95 LETEFDTFTLLNIYFPN---GQMNEDRLNYKMEFYDALLEYCNSLVNEGKKIIICGDYNT 151
Query: 183 AHKSIDIYKGWNIEEI--YSEEERAWMDNFF-NDYVDLFRHFHPDEKDIFTNWDMMSEAR 353
AH +DI E+ + ERAW+D F N Y D FR+ +PD K ++ W M +AR
Sbjct: 152 AHTEMDIKNAKANEKTSGFLPVERAWLDKFIKNGYTDSFRYINPD-KIQYSWWSYMFKAR 210
Query: 354 IHNEGQRIDYAACSKGFLDEVIDAEIVKMVPKNWSDHASIVLTLKDQ 494
N G RIDY S L V DA+I+ V SDH +V+ ++DQ
Sbjct: 211 ERNVGWRIDYHFVSNNLLPYVSDAKILNEV--TGSDHCPVVIEIQDQ 255
>ref|XP_004606538.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2 [Sorex
araneus]
Length = 518
Score = 104 bits (259), Expect = 4e-20
Identities = 66/228 (28%), Positives = 114/228 (50%), Gaps = 19/228 (8%)
Frame = +3
Query: 21 SFVLLNVYVPNYGDHSTGRP-RLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNIAHKSI 197
+ +L+NVY P+ G P RL FK+ F R L++R + L+ +G V+I+GD N AH+SI
Sbjct: 149 TLILINVYCPHA---DPGNPERLSFKIRFYRLLQIRAEALLAAGSHVIILGDLNTAHRSI 205
Query: 198 DIYKGWNIEEIYSEEERAWMDNFFND------------YVDLFRHFHPDEKDIFTNWDMM 341
D + N+E + R WM+ + ++D +R+FHP+++ FT W +
Sbjct: 206 DHWDSGNLESFEEDPGRKWMNELLSTLECQSESHHIGLFIDSYRYFHPEQEGAFTCWSTI 265
Query: 342 SEARIHNEGQRIDYAACSKGFLDEVIDAEIVKMVPKNWSDHASIVLTLKDQPTLPEHPAP 521
+ AR N G RIDY + + + A + + SDH + + P +P P
Sbjct: 266 TGARHFNYGSRIDYVLGDRNLVIDTFKASFL-LPEVMGSDHCPVGAVMSVSP-VPAKQCP 323
Query: 522 AISSRSMKKFK-EQNRITSFLVKPKPLAILSSK-----NEISNENQQS 647
++ +R + +F Q +I +FLV+ ++L N+ + QQ+
Sbjct: 324 SLCTRFLPEFAGTQLKILNFLVRLDQDSVLKQSMLPLCNQTQTKTQQN 371
>ref|XP_004598385.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2 [Ochotona
princeps]
Length = 518
Score = 104 bits (259), Expect = 4e-20
Identities = 70/226 (30%), Positives = 113/226 (50%), Gaps = 14/226 (6%)
Frame = +3
Query: 6 ETDHGSFVLLNVYVPNYGDHSTGRP-RLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNI 182
E + L+NVY P+ G+P RL FKM F R L++R + L+ SG V+I+GD N
Sbjct: 144 EGQERTLTLINVYCPHA---DPGKPERLTFKMRFYRLLQIRAEALLASGSHVIILGDLNT 200
Query: 183 AHKSIDIYKGWNIEEIYSEEERAWMDNFFND-----------YVDLFRHFHPDEKDIFTN 329
AH+ ID N+E + R WMD ++ +VD FRHF P+++ FT
Sbjct: 201 AHRPIDHCDAINMEYFEEDPGRKWMDGLLSNPRCQDGSHGGPFVDSFRHFQPNQERAFTC 260
Query: 330 WDMMSEARIHNEGQRIDYAACSKGFLDEVIDAEIVKMVPKNWSDHASIVLTLKDQPTLPE 509
W +++ AR+ N G R+DY + + + + + + SDH + L +LP
Sbjct: 261 WSVVTGARLLNYGSRLDYVLGDRTLVIDTFQSSFL-LPEVMGSDHCPVGAVL-SVSSLPA 318
Query: 510 HPAPAISSRSMKKFK-EQNRITSFLVKPKPLAIL-SSKNEISNENQ 641
P + +R + +F Q +I FLV + L S +++SN+ +
Sbjct: 319 KQCPPLCTRFLPEFAGTQLKIVRFLVPREQAPTLEESASQLSNQTR 364
>ref|XP_006960081.1| DNase I-like protein [Wallemia sebi CBS 633.66]
gi|388579621|gb|EIM19943.1| DNase I-like protein
[Wallemia sebi CBS 633.66]
Length = 510
Score = 104 bits (259), Expect = 4e-20
Identities = 69/209 (33%), Positives = 100/209 (47%), Gaps = 11/209 (5%)
Frame = +3
Query: 12 DHGSFVLLNVYVPNYGDHSTGRPRLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNIAHK 191
D+G FVL+NVY P GD S R++FK +F L R L GR+++++GD NIAH+
Sbjct: 145 DYGMFVLINVYCPAEGDES----RVKFKKSFHELLFERIRILKEGGRQIILLGDINIAHR 200
Query: 192 SIDIYKGWNIE-------EIYSEEERAWMDNFFND----YVDLFRHFHPDEKDIFTNWDM 338
+ID G + E ++ R WMD +D VD+ R FHP + +FT W+
Sbjct: 201 AIDHCDGLELTRTDIGKMEFETKYTRQWMDKLVSDDNSPLVDIMRLFHPTREGMFTCWNQ 260
Query: 339 MSEARIHNEGQRIDYAACSKGFLDEVIDAEIVKMVPKNWSDHASIVLTLKDQPTLPEHPA 518
+ AR N G RIDY + G + V +A+I V SDH + + L D P
Sbjct: 261 LINARPSNYGTRIDYVLITPGLIPWVKEADIAPSVYN--SDHCPVFIDLHDSIPDPHDDT 318
Query: 519 PAISSRSMKKFKEQNRITSFLVKPKPLAI 605
+ + +L KPK A+
Sbjct: 319 KVL------------HLKDYLSKPKGAAL 335
>gb|AHH06593.1| Exodeoxyribonuclease III [Borrelia crocidurae DOU]
Length = 254
Score = 103 bits (257), Expect = 6e-20
Identities = 66/158 (41%), Positives = 87/158 (55%), Gaps = 3/158 (1%)
Frame = +3
Query: 24 FVLLNVYVPNYGDHSTGRPRLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNIAHKSIDI 203
F+L+N Y PN + R RL +K+ FL +L+ + VTSG+ +++ GDFNIAH ID+
Sbjct: 102 FILINAYFPN---SQSLRKRLNYKLEFLMSLESIANAFVTSGKNLIVCGDFNIAHTEIDL 158
Query: 204 YKGWNIEEI--YSEEERAWMDNFFN-DYVDLFRHFHPDEKDIFTNWDMMSEARIHNEGQR 374
E + EE WMDNF N YVD FR F+ E +T WD + AR N G R
Sbjct: 159 SNPKTSRESAGFYVEETNWMDNFLNRGYVDTFRMFN-KEPGNYTWWDYKTRARERNVGWR 217
Query: 375 IDYAACSKGFLDEVIDAEIVKMVPKNWSDHASIVLTLK 488
IDY +K F +V DA I+ V SDH + L LK
Sbjct: 218 IDYFVINKAFQSKVKDALILNKV--MGSDHCPVFLKLK 253
>ref|YP_002222178.1| exodeoxyribonuclease III [Borrelia duttonii Ly]
gi|501531810|ref|WP_012538281.1| exodeoxyribonuclease
III [Borrelia duttonii] gi|201083881|gb|ACH93472.1|
exodeoxyribonuclease III [Borrelia duttonii Ly]
Length = 254
Score = 103 bits (257), Expect = 6e-20
Identities = 66/158 (41%), Positives = 87/158 (55%), Gaps = 3/158 (1%)
Frame = +3
Query: 24 FVLLNVYVPNYGDHSTGRPRLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNIAHKSIDI 203
F+L+N Y PN + R RL +K+ FL +L+ + VTSG+ +++ GDFNIAH ID+
Sbjct: 102 FILINAYFPN---SQSLRKRLNYKLEFLMSLESIANSFVTSGKNLIVCGDFNIAHTEIDL 158
Query: 204 YKGWNIEEI--YSEEERAWMDNFFN-DYVDLFRHFHPDEKDIFTNWDMMSEARIHNEGQR 374
E + EE WMDNF N YVD FR F+ E +T WD + AR N G R
Sbjct: 159 SNPKTSRESAGFYVEETNWMDNFLNRGYVDTFRMFN-KEPGNYTWWDYKTRARERNVGWR 217
Query: 375 IDYAACSKGFLDEVIDAEIVKMVPKNWSDHASIVLTLK 488
IDY +K F +V DA I+ V SDH + L LK
Sbjct: 218 IDYFVINKAFQSKVKDALILNKV--MGSDHCPVFLKLK 253
>ref|YP_001883958.1| exodeoxyribonuclease III [Borrelia hermsii HS1]
gi|501390724|ref|WP_012422290.1| exodeoxyribonuclease
III [Borrelia hermsii] gi|119861243|gb|AAX17038.1|
exodeoxyribonuclease III [Borrelia hermsii HS1]
Length = 253
Score = 103 bits (256), Expect = 8e-20
Identities = 68/158 (43%), Positives = 87/158 (55%), Gaps = 3/158 (1%)
Frame = +3
Query: 24 FVLLNVYVPNYGDHSTGRPRLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNIAHKSIDI 203
F+L+N Y PN R RL +K+ FL +L+ + VT+G+ V+I GDFNIAH ID+
Sbjct: 101 FILINAYFPN---SQALRKRLNYKLEFLMSLESIANSFVTAGKNVVICGDFNIAHTEIDL 157
Query: 204 YKGWNIEEI--YSEEERAWMDNFFN-DYVDLFRHFHPDEKDIFTNWDMMSEARIHNEGQR 374
+ E + EE WMDNF N YVD FR F+ E +T WD + AR N G R
Sbjct: 158 SNPKSSRESAGFYIEETTWMDNFLNGGYVDTFRMFN-GEPGNYTWWDYRTRARERNIGWR 216
Query: 375 IDYAACSKGFLDEVIDAEIVKMVPKNWSDHASIVLTLK 488
IDY +K F EV DA I+ V SDH + L LK
Sbjct: 217 IDYFLVNKVFKSEVRDALILNEV--MGSDHCPVFLELK 252
>gb|AHE62849.1| exodeoxyribonuclease III [Borrelia parkeri HR1]
gi|576098850|gb|AHH09398.1| Exodeoxyribonuclease III
[Borrelia parkeri SLO]
Length = 253
Score = 102 bits (254), Expect = 1e-19
Identities = 66/158 (41%), Positives = 89/158 (56%), Gaps = 3/158 (1%)
Frame = +3
Query: 24 FVLLNVYVPNYGDHSTGRPRLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNIAHKSIDI 203
F+L+N Y PN + R RL +K+ FL +L+ + VTSG+ ++I GDFNIAH ID+
Sbjct: 101 FILINAYFPN---SQSLRKRLPYKLEFLMSLESIANVFVTSGKNIVICGDFNIAHTEIDL 157
Query: 204 YKGWNIEEI--YSEEERAWMDNFFN-DYVDLFRHFHPDEKDIFTNWDMMSEARIHNEGQR 374
E + EE WMDNF N YVD FR F+ D + +T WD + AR N G R
Sbjct: 158 ANPKTSRESAGFYIEETTWMDNFLNGGYVDTFRMFNMDPGN-YTWWDYKTRARERNIGWR 216
Query: 375 IDYAACSKGFLDEVIDAEIVKMVPKNWSDHASIVLTLK 488
IDY ++ F +V DA I++ V SDH + L LK
Sbjct: 217 IDYFIVNEFFKSKVKDALILREV--MGSDHCPVFLELK 252
>dbj|GAC99363.1| exodeoxyribonuclease III [Pseudozyma hubeiensis SY62]
Length = 743
Score = 102 bits (254), Expect = 1e-19
Identities = 80/263 (30%), Positives = 119/263 (45%), Gaps = 30/263 (11%)
Frame = +3
Query: 3 VETDHGSFVLLNVYVPNYGDHSTGRPRLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNI 182
V D G FVL NVY PN TG RL +KM + + L R L+ +GR+V+IVGD NI
Sbjct: 139 VVLDLGLFVLFNVYCPN----ETGPERLDYKMTYYQGLAERAHRLIQAGRQVMIVGDMNI 194
Query: 183 AHKSIDIYK--------GWNIEEIYSEEERAWMDNFF---NDYVDLFRHFHPDEKDIFTN 329
ID GWN + R+W F + D+ R +HPD K +FT
Sbjct: 195 IRDPIDHCDPEQSMREHGWN--HFHQHPARSWFQTFLAPQGKFHDVGREYHPDRKKMFTC 252
Query: 330 WDMMSEARIHNEGQRIDYAACSKGFLDEVIDAEIVKMVPKNWSDHASIVLTLKDQPTL-- 503
W+ + +AR N G R+DY ++G L + A+I V SDH + + L D+ +
Sbjct: 253 WNTLIDARPANYGCRLDYTLVTEGLLPWIKGADIQADV--YGSDHCPVYVDLHDEREIDG 310
Query: 504 ------------PEHPAPAISSRSMKKFK-EQNRITSFLVKPKPLAILSSKNEISNE--- 635
PA+++ +F +Q ++ SF + A S + + N
Sbjct: 311 KIVKLADLMHGGSHRLPPALAACHYDEFSGKQRKLASFFGASRKAAPAKSSSPVINVQPD 370
Query: 636 -NQQSLCVTNTDGGDLLERSASE 701
NQ S+ T +DG E + S+
Sbjct: 371 LNQTSMETTASDGTTSKESTVSK 393
>ref|YP_004530293.1| exodeoxyribonuclease III [Treponema primitia ZAS-2]
gi|505822028|ref|WP_015707424.1| exodeoxyribonuclease
III [Treponema primitia] gi|333741451|gb|AEF86941.1|
exodeoxyribonuclease III [Treponema primitia ZAS-2]
Length = 260
Score = 102 bits (254), Expect = 1e-19
Identities = 63/165 (38%), Positives = 89/165 (53%), Gaps = 3/165 (1%)
Frame = +3
Query: 3 VETDHGSFVLLNVYVPNYGDHSTGRPRLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNI 182
++ D FVL++ Y PN D RL +K+ F A+ C+ LV++GR +++ GD+NI
Sbjct: 99 LQADFKDFVLISAYFPNSQDAGA---RLGYKLDFCAAMLECCNKLVSAGRHLVLCGDYNI 155
Query: 183 AHKSIDIYKGWNIEEI--YSEEERAWMDNFFN-DYVDLFRHFHPDEKDIFTNWDMMSEAR 353
AH ID+ + E Y EERAWMD F YVD FR FHP E ++ W AR
Sbjct: 156 AHTPIDLARPKENEGNAGYLPEERAWMDTFIAAGYVDTFRSFHPGETGCYSWWSYRMSAR 215
Query: 354 IHNEGQRIDYAACSKGFLDEVIDAEIVKMVPKNWSDHASIVLTLK 488
N G R+DY K F+ +V A I++ + SDH + + LK
Sbjct: 216 ERNVGWRLDYHCVDKAFMPKV-SASIIRPDVQG-SDHCPVQIELK 258
>ref|YP_945526.1| exodeoxyribonuclease III [Borrelia turicatae 91E135]
gi|500096467|ref|WP_011772474.1| exodeoxyribonuclease
III [Borrelia turicatae] gi|119862088|gb|AAX17856.1|
exodeoxyribonuclease III [Borrelia turicatae 91E135]
Length = 252
Score = 102 bits (254), Expect = 1e-19
Identities = 66/158 (41%), Positives = 89/158 (56%), Gaps = 3/158 (1%)
Frame = +3
Query: 24 FVLLNVYVPNYGDHSTGRPRLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNIAHKSIDI 203
F+L+N Y PN + R RL +K+ FL +L+ + VTSG+ ++I GDFNIAH ID+
Sbjct: 101 FILINAYFPN---SQSLRKRLPYKLEFLMSLESIANMFVTSGKNIVICGDFNIAHTEIDL 157
Query: 204 YKGWNIEEI--YSEEERAWMDNFFN-DYVDLFRHFHPDEKDIFTNWDMMSEARIHNEGQR 374
E + EE WMDNF N YVD FR F+ D + +T WD + AR N G R
Sbjct: 158 ANPKTSRESAGFYIEETTWMDNFLNGGYVDTFRMFNMDPGN-YTWWDYKTRARERNIGWR 216
Query: 375 IDYAACSKGFLDEVIDAEIVKMVPKNWSDHASIVLTLK 488
IDY ++ F +V DA I++ V SDH + L LK
Sbjct: 217 IDYFIVNEFFKSKVKDALILREV--MGSDHCPVFLELK 252
>ref|YP_001357960.1| exodeoxyribonuclease III [Sulfurovum sp. NBC37-1]
gi|500721227|ref|WP_011980336.1| exodeoxyribonuclease
III [Sulfurovum sp. NBC37-1]
gi|151424100|dbj|BAF71603.1| exodeoxyribonuclease III
[Sulfurovum sp. NBC37-1]
Length = 256
Score = 102 bits (253), Expect = 2e-19
Identities = 62/163 (38%), Positives = 88/163 (53%), Gaps = 3/163 (1%)
Frame = +3
Query: 6 ETDHGSFVLLNVYVPNYGDHSTGRPRLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNIA 185
E GS+VL NVY PN G S RL +K+AF + + T G+ ++I GD N A
Sbjct: 97 EYHFGSYVLFNVYFPN-GQRS--EERLAYKLAFYERFLAYINEVRTEGKSIIICGDVNTA 153
Query: 186 HKSIDIYKGWNIEEI--YSEEERAWMDNFF-NDYVDLFRHFHPDEKDIFTNWDMMSEARI 356
HK ID+ + + E + ERAWMD N Y+D FR+ H DE D ++ W ++AR
Sbjct: 154 HKEIDLARPKSNENTSGFLPVERAWMDKLLDNGYIDTFRYIHGDEPDRYSWWSYRTKARE 213
Query: 357 HNEGQRIDYAACSKGFLDEVIDAEIVKMVPKNWSDHASIVLTL 485
N G RIDY S ++++DA+I+ + SDH + L L
Sbjct: 214 RNVGWRIDYFFVSDDLKEKIVDADILDHI--MGSDHCPVKLVL 254
>gb|EFW39920.2| apurinic/apyrimidinic endonuclease 2 [Capsaspora owczarzaki ATCC
30864]
Length = 742
Score = 101 bits (252), Expect = 2e-19
Identities = 66/187 (35%), Positives = 95/187 (50%), Gaps = 9/187 (4%)
Frame = +3
Query: 3 VETDHGSFVLLNVYVPNYGDHSTGRPRLRFKMAFLRALKLRCDYLVTSGREVLIVGDFNI 182
V TDH FVL N+Y P D + G R+ FK F R L+LR + L T+GR V++ GDFN+
Sbjct: 329 VVTDHDRFVLFNLYCPR-ADSAEGE-RMTFKQEFYRVLQLRVNALRTAGRCVIVAGDFNL 386
Query: 183 AHKSIDIYKGWNIE------EIYSEEERAWMDNFFND-YVDLFRHFHPDEKDIFTNWDMM 341
H+ ID N + + R WM++F + VD FRHFHP +T W +
Sbjct: 387 THRRIDHCDPENYTTDDGSVDFEAHPSRRWMESFLAEGRVDCFRHFHPLLSSRYTCWRVD 446
Query: 342 SEARIHNEGQRIDYAACSKGFLDEVIDAEIVKMVPKNWSDHASIVLTLKD--QPTLPEHP 515
+ AR N G RIDY + L ++ + P SDH +V+T + T+P+
Sbjct: 447 TRARETNYGTRIDYIVTDQALLPDISGCYHLTRFP--GSDHCPVVITAAPTLRLTIPQRN 504
Query: 516 APAISSR 536
P + +R
Sbjct: 505 PPKLCAR 511