BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00024196
         (1058 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006843220.1| hypothetical protein AMTR_s00080p00039920 [A...   270   5e-70
emb|CBI32614.3| unnamed protein product [Vitis vinifera]              266   1e-68
ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containi...   261   4e-67
ref|XP_004306228.1| PREDICTED: pentatricopeptide repeat-containi...   253   7e-65
gb|EPS62297.1| hypothetical protein M569_12494, partial [Genlise...   251   3e-64
ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containi...   251   4e-64
ref|XP_006428878.1| hypothetical protein CICLE_v10011148mg [Citr...   250   8e-64
ref|XP_006361774.1| PREDICTED: pentatricopeptide repeat-containi...   249   2e-63
gb|EXC16278.1| hypothetical protein L484_024452 [Morus notabilis]     247   6e-63
gb|EMJ07627.1| hypothetical protein PRUPE_ppa001926mg [Prunus pe...   246   1e-62
gb|EOY07747.1| Tetratricopeptide repeat (TPR)-like superfamily p...   242   2e-61
ref|XP_002322855.2| hypothetical protein POPTR_0016s08650g [Popu...   241   5e-61
ref|XP_002525184.1| pentatricopeptide repeat-containing protein,...   236   1e-59
ref|XP_004497462.1| PREDICTED: pentatricopeptide repeat-containi...   235   3e-59
ref|XP_004497461.1| PREDICTED: pentatricopeptide repeat-containi...   235   3e-59
ref|XP_002967672.1| hypothetical protein SELMODRAFT_88400 [Selag...   229   1e-57
ref|XP_002963977.1| hypothetical protein SELMODRAFT_82002 [Selag...   228   2e-57
gb|ESW16523.1| hypothetical protein PHAVU_007G163500g [Phaseolus...   227   7e-57
ref|XP_001770673.1| predicted protein [Physcomitrella patens] gi...   226   2e-56
ref|XP_006407654.1| hypothetical protein EUTSA_v10020113mg [Eutr...   223   1e-55

>ref|XP_006843220.1| hypothetical protein AMTR_s00080p00039920 [Amborella trichopoda]
            gi|548845504|gb|ERN04895.1| hypothetical protein
            AMTR_s00080p00039920 [Amborella trichopoda]
          Length = 718

 Score =  270 bits (691), Expect = 5e-70
 Identities = 154/358 (43%), Positives = 211/358 (58%), Gaps = 23/358 (6%)
 Frame = +1

Query: 49   SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQALDYYALEMXXXXXXRHGDPLFGAQVL 228
            SR + +L+YQGT  A+ RA  ++    ++  +  LD  AL +      + G P     ++
Sbjct: 92   SRLVCQLAYQGTPLALTRAHSILSRLRKQQLVHRLDANALGLLAMATAKAGHPTPALSII 151

Query: 229  GRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDISLALFDEFCEAAELGGDHRMK----PD 396
              ML +G  PHVKAWSAVLSRL      S+   +L LF    E   L  +  +     PD
Sbjct: 152  YSMLSIGHLPHVKAWSAVLSRL------STPRDALKLFHSILEHLSLSPEPALLSLSYPD 205

Query: 397  AGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLIGVVE 576
              AFNA+LN CA AG       + SRM    +IPDALTYNI+IK +AR+ RK+LL+ V+E
Sbjct: 206  VAAFNAVLNACANAGDAVNFVEIFSRMPKFELIPDALTYNIMIKFFARIERKELLVAVLE 265

Query: 577  DMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSASXXXXXXXX 756
             ML+  + PC T+FHSLVAAYVGLGDL++A+ LV A+  GR D+C+L+R  S        
Sbjct: 266  KMLAMKVAPCATSFHSLVAAYVGLGDLEMAEILVRAMSEGRQDVCALLRERSPRTTAMEF 325

Query: 757  XXXXXXX-------------------RTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQ 879
                                      ++Y P+S+IYTTLMKGYM +GRL+D+M +L  M+
Sbjct: 326  DEISSMIESLGLDISHDSSSAPLLLPKSYHPDSRIYTTLMKGYMHQGRLNDVMDLLETME 385

Query: 880  QDSERDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSGYCR 1053
            +  +   QPDEV+YTT ++A V+ GLM+ A  +  EM+S+KVPAN +TYNVLL GYCR
Sbjct: 386  KQRDSS-QPDEVTYTTVVTALVREGLMDRARAMLSEMASRKVPANRVTYNVLLKGYCR 442



 Score = 67.8 bits (164), Expect = 7e-09
 Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 5/226 (2%)
 Frame = +1

Query: 391  PDAGAFNAILNGCAIAGRLDTAQRLMSRMDSL--GVIPDALTYNILIKLYARLSRKDLLI 564
            PD+  +  ++ G    GRL+    L+  M+       PD +TY  ++    R    D   
Sbjct: 356  PDSRIYTTLMKGYMHQGRLNDVMDLLETMEKQRDSSQPDEVTYTTVVTALVREGLMDRAR 415

Query: 565  GVVEDMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSG--RLDICSLMRSASXX 738
             ++ +M S  +P    T++ L+  Y  L  +  A+ LV  ++     LD+ S        
Sbjct: 416  AMLSEMASRKVPANRVTYNVLLKGYCRLVQMKKAEALVGDMKEAGIELDVVS-------- 467

Query: 739  XXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQDSERDCQPDEVS 918
                                  Y  L+ G +    +DD  + L +  +   +   P ++S
Sbjct: 468  ----------------------YNILIDGCI---VIDDSAKALSYFNEMRSKGIAPSKIS 502

Query: 919  YTTAISAFVKSGLMEEAHKIAHEM-SSKKVPANLITYNVLLSGYCR 1053
            YTT + AF  SG  + A K+  EM    +V  +++ +N+LL  YCR
Sbjct: 503  YTTLMKAFASSGKPKLASKVFDEMLKDPRVEVDMVAWNMLLDAYCR 548


>emb|CBI32614.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  266 bits (679), Expect = 1e-68
 Identities = 143/338 (42%), Positives = 201/338 (59%), Gaps = 4/338 (1%)
 Frame = +1

Query: 49   SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQALDYYALEMXXXXXXRHGDPLFGAQVL 228
            SR +++LSYQ T +A+ RA+ +++    + ++  LD  +L +      + G  L+ A ++
Sbjct: 121  SRLVSQLSYQNTHQALTRAQSIIQRLRNERQLHRLDANSLGLLAVSAAKAGHTLYAASLI 180

Query: 229  GRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDISLALFDEFCEAAELGGDHRM----KPD 396
              ML  G  PHVKAWSAV+SRLA       L+ +L LFD          D  +    +PD
Sbjct: 181  KSMLRSGYLPHVKAWSAVVSRLAASGDDGPLE-ALKLFDSVTRRIHRFTDATLVADSRPD 239

Query: 397  AGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLIGVVE 576
              A+NA+LN CA  G      ++   M  LG  PD LTYN++IKL AR+ RKDLL+ V+E
Sbjct: 240  TAAYNAVLNACANLGDTKRFLQVFEEMTQLGAEPDVLTYNVMIKLCARVDRKDLLVFVLE 299

Query: 577  DMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSASXXXXXXXX 756
             +L  GI  C+TT HSLVAAYVG GDL+ A+ LV A+R GR D+C ++R  +        
Sbjct: 300  RILDKGIQLCMTTLHSLVAAYVGFGDLETAEKLVQAMREGRQDLCKILRDVNSENP---- 355

Query: 757  XXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQDSERDCQPDEVSYTTAIS 936
                     Y P+S+IYTTLMKGYM  GR+ D +++L  M+   +   QPD V+YTT +S
Sbjct: 356  --------AYAPDSRIYTTLMKGYMKEGRVTDTVRMLEAMRHQDDSTSQPDHVTYTTVVS 407

Query: 937  AFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSGYC 1050
            A VK+G M+ A ++  EM+   VPAN +TYN+LL GYC
Sbjct: 408  ALVKAGSMDRARQVLAEMTRIGVPANRVTYNILLKGYC 445



 Score = 67.8 bits (164), Expect = 7e-09
 Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 1/231 (0%)
 Frame = +1

Query: 355  EAAELGGDHRMKPDAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLY 534
            EA     D   +PD   +  +++    AG +D A+++++ M  +GV  + +TYNIL+K Y
Sbjct: 385  EAMRHQDDSTSQPDHVTYTTVVSALVKAGSMDRARQVLAEMTRIGVPANRVTYNILLKGY 444

Query: 535  ARLSRKDLLIGVVEDMLSN-GIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDIC 711
                + D    +V +M+ + GI P + ++++L+   + + D   A    N +R+      
Sbjct: 445  CEQLQIDKAKELVREMVDDEGIVPDVVSYNTLIDGCILVDDSAGALAYFNEMRA------ 498

Query: 712  SLMRSASXXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQDSE 891
                                  R   P    YTTLMK +   G+     +V   M +D  
Sbjct: 499  ----------------------RGIAPTKISYTTLMKAFALSGQPKLANKVFDEMLRDPR 536

Query: 892  RDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSG 1044
               + D V++   + A  + GL+EEA K    M       N+ TY  L +G
Sbjct: 537  --VKVDLVAWNMLVEAHCRLGLVEEAKKTVQRMRENGFYPNVATYGSLANG 585


>ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like [Vitis vinifera]
          Length = 749

 Score =  261 bits (666), Expect = 4e-67
 Identities = 143/354 (40%), Positives = 202/354 (57%), Gaps = 20/354 (5%)
 Frame = +1

Query: 49   SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQALDYYALEMXXXXXXRHGDPLFGAQVL 228
            SR +++LSYQ T +A+ RA+ +++    + ++  LD  +L +      + G  L+ A ++
Sbjct: 113  SRLVSQLSYQNTHQALTRAQSIIQRLRNERQLHRLDANSLGLLAVSAAKAGHTLYAASLI 172

Query: 229  GRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDISLALFDEFCEAAELGGDHRM----KPD 396
              ML  G  PHVKAWSAV+SRLA       L+ +L LFD          D  +    +PD
Sbjct: 173  KSMLRSGYLPHVKAWSAVVSRLAASGDDGPLE-ALKLFDSVTRRIHRFTDATLVADSRPD 231

Query: 397  AGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLIGVVE 576
              A+NA+LN CA  G      ++   M  LG  PD LTYN++IKL AR+ RKDLL+ V+E
Sbjct: 232  TAAYNAVLNACANLGDTKRFLQVFEEMTQLGAEPDVLTYNVMIKLCARVDRKDLLVFVLE 291

Query: 577  DMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSAS-------- 732
             +L  GI  C+TT HSLVAAYVG GDL+ A+ LV A+R GR D+C ++R  +        
Sbjct: 292  RILDKGIQLCMTTLHSLVAAYVGFGDLETAEKLVQAMREGRQDLCKILRDVNSENPGNNE 351

Query: 733  --------XXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQDS 888
                                   + Y P+S+IYTTLMKGYM  GR+ D +++L  M+   
Sbjct: 352  GYIFDKLLPNSVERNNSEPPLLPKAYAPDSRIYTTLMKGYMKEGRVTDTVRMLEAMRHQD 411

Query: 889  ERDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSGYC 1050
            +   QPD V+YTT +SA VK+G M+ A ++  EM+   VPAN +TYN+LL GYC
Sbjct: 412  DSTSQPDHVTYTTVVSALVKAGSMDRARQVLAEMTRIGVPANRVTYNILLKGYC 465



 Score = 67.8 bits (164), Expect = 7e-09
 Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 1/231 (0%)
 Frame = +1

Query: 355  EAAELGGDHRMKPDAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLY 534
            EA     D   +PD   +  +++    AG +D A+++++ M  +GV  + +TYNIL+K Y
Sbjct: 405  EAMRHQDDSTSQPDHVTYTTVVSALVKAGSMDRARQVLAEMTRIGVPANRVTYNILLKGY 464

Query: 535  ARLSRKDLLIGVVEDMLSN-GIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDIC 711
                + D    +V +M+ + GI P + ++++L+   + + D   A    N +R+      
Sbjct: 465  CEQLQIDKAKELVREMVDDEGIVPDVVSYNTLIDGCILVDDSAGALAYFNEMRA------ 518

Query: 712  SLMRSASXXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQDSE 891
                                  R   P    YTTLMK +   G+     +V   M +D  
Sbjct: 519  ----------------------RGIAPTKISYTTLMKAFALSGQPKLANKVFDEMLRDPR 556

Query: 892  RDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSG 1044
               + D V++   + A  + GL+EEA K    M       N+ TY  L +G
Sbjct: 557  --VKVDLVAWNMLVEAHCRLGLVEEAKKTVQRMRENGFYPNVATYGSLANG 605


>ref|XP_004306228.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 743

 Score =  253 bits (647), Expect = 7e-65
 Identities = 146/360 (40%), Positives = 204/360 (56%), Gaps = 25/360 (6%)
 Frame = +1

Query: 49   SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQALDYYALEMXXXXXXRHGDPLFGAQVL 228
            SR +++LSYQ TR ++ RA+ ++    ++ +++ LD  +L +      + G   +   ++
Sbjct: 110  SRLLSQLSYQNTRTSLTRAQSIITRLRDERQLRHLDANSLGLLAVAAAKAGQTRYATSIV 169

Query: 229  GRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDISLALF-------DEFCEAAELGGDHRM 387
              ML  G  PHVKAWSAV+SRLA        + +L LF         F E  EL  D R 
Sbjct: 170  KSMLRSGFLPHVKAWSAVVSRLAASGDDGPAE-ALKLFYSVTRRVRRFAEP-ELVADSR- 226

Query: 388  KPDAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLIG 567
             PD  AFNA LN CA  G  D   +L   M   G  PD LTYN++IKL AR+ RKDLL+ 
Sbjct: 227  -PDTAAFNAALNACANLGDSDRFLKLFDEMPESGAEPDVLTYNVMIKLCARVGRKDLLVF 285

Query: 568  VVEDMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSAS----- 732
            V+E +L  GI  C+TT +SLVAAYVG GDL+ A+ +V A+R GR D+C ++R A+     
Sbjct: 286  VLERILDQGITVCMTTLNSLVAAYVGFGDLETAEKMVQAMREGRRDLCKILREANLRNSN 345

Query: 733  -------------XXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLF 873
                                        + Y  NS+IYTTLMKGYM+ GR+ D +++L  
Sbjct: 346  SSGRDGNVFEKLLPNSVTASECEPPLLPKAYTANSRIYTTLMKGYMNAGRVIDTVRMLEA 405

Query: 874  MQQDSERDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSGYCR 1053
            ++   +   QPD V+YTT +SAFVK+G M+ A ++  EM+   VPAN ITYN+LL GYC+
Sbjct: 406  LRHQDDSSSQPDHVTYTTVVSAFVKAGSMDRARRVLAEMTRVGVPANRITYNILLKGYCQ 465


>gb|EPS62297.1| hypothetical protein M569_12494, partial [Genlisea aurea]
          Length = 675

 Score =  251 bits (642), Expect = 3e-64
 Identities = 139/359 (38%), Positives = 200/359 (55%), Gaps = 24/359 (6%)
 Frame = +1

Query: 49   SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQALDYYALEMXXXXXXRHGDPLFGAQVL 228
            SR + +LS+Q T E + +A+ ++   +   E+  LD  +L +      + G  L+   ++
Sbjct: 37   SRLVAQLSFQKTAEGLNKAQSIINRLQRDRELHRLDANSLGILAVAAAKAGHVLYAVSIV 96

Query: 229  GRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDISLALFDEFCEAAELGGDHRM----KPD 396
              ML+ G  PHVKAWSAV S LA       +  ++ LF+       +  D  +    KPD
Sbjct: 97   KSMLKAGYLPHVKAWSAVASHLASSGDDGPVQ-AIKLFNSVTRRVRMFSDGEIVKDSKPD 155

Query: 397  AGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLIGVVE 576
             GA+NA LN CA+ G  +   +L   M      PDALTYN++IKL AR+ RKDLL+ V+E
Sbjct: 156  TGAYNAALNACAVLGDSNKFLKLFDEMPEFDCEPDALTYNVMIKLCARVGRKDLLVFVLE 215

Query: 577  DMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSAS-------- 732
             ++      CITT HSLVAAYVG  DL+ A+ LV A+R GR D+C L+R +S        
Sbjct: 216  RIIQTQTDFCITTLHSLVAAYVGFNDLETAEKLVQAMREGRTDLCKLLRDSSISDAEDEE 275

Query: 733  ------------XXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFM 876
                                       R + P+S+IYTTLMKGYM  GR+ D +++L  M
Sbjct: 276  QDHSHVFKKLLPNATTANEIEDPPQLPRPFSPDSRIYTTLMKGYMKAGRVADTVRMLTAM 335

Query: 877  QQDSERDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSGYCR 1053
            + + +    PD V+YTT ISAFVK+  M++A ++  EM+ + VPANL+TYN+LL GYC+
Sbjct: 336  RYEEDESSHPDHVAYTTVISAFVKARSMDKARQVLAEMAKRDVPANLVTYNILLKGYCQ 394



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 1/224 (0%)
 Frame = +1

Query: 376  DHRMKPDAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKD 555
            D    PD  A+  +++    A  +D A+++++ M    V  + +TYNIL+K Y +  + D
Sbjct: 340  DESSHPDHVAYTTVISAFVKARSMDKARQVLAEMAKRDVPANLVTYNILLKGYCQQLQMD 399

Query: 556  LLIGVVEDMLSN-GIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSAS 732
                ++ +M++  GI P   ++++L+   +   D   A    N +R+             
Sbjct: 400  KAEDLIREMINRAGIEPDAVSYNTLIDGCILSDDSAGALAYFNEMRT------------- 446

Query: 733  XXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQDSERDCQPDE 912
                           R   P    YTTLMK +   G+     +V   M +D     +PD 
Sbjct: 447  ---------------RGIAPTKVSYTTLMKAFASSGQPKLANKVFDEMLKDPR--VKPDL 489

Query: 913  VSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSG 1044
            +++   +  + K G++EEA  +   M    V  N+ TY  L +G
Sbjct: 490  IAWNMLVEGYCKLGMVEEAKTVIQAMKDYGVHPNVATYGSLANG 533



 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 36/148 (24%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
 Frame = +1

Query: 280 VLSRLAKHAAPSSLDISLALFDEFCEAAELGGDHRM----------KPDAGAFNAILNGC 429
           VL+ +AK   P++L     L   +C+  ++     +          +PDA ++N +++GC
Sbjct: 369 VLAEMAKRDVPANLVTYNILLKGYCQQLQMDKAEDLIREMINRAGIEPDAVSYNTLIDGC 428

Query: 430 AIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLIGVVEDMLSN-GIPPC 606
            ++     A    + M + G+ P  ++Y  L+K +A   +  L   V ++ML +  + P 
Sbjct: 429 ILSDDSAGALAYFNEMRTRGIAPTKVSYTTLMKAFASSGQPKLANKVFDEMLKDPRVKPD 488

Query: 607 ITTFHSLVAAYVGLGDLDLAKTLVNALR 690
           +  ++ LV  Y  LG ++ AKT++ A++
Sbjct: 489 LIAWNMLVEGYCKLGMVEEAKTVIQAMK 516


>ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like [Cucumis sativus]
            gi|449483612|ref|XP_004156638.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like [Cucumis sativus]
          Length = 736

 Score =  251 bits (640), Expect = 4e-64
 Identities = 138/361 (38%), Positives = 199/361 (55%), Gaps = 26/361 (7%)
 Frame = +1

Query: 49   SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQALDYYALEMXXXXXXRHGDPLFGAQVL 228
            SR +++LSYQ T  ++ RA+ ++    +  ++  LD  +L +      + G  L+   V+
Sbjct: 100  SRLVSQLSYQNTPSSLTRAQSILTRLRQDNQLHRLDANSLGLLAVAAAKAGHTLYACSVI 159

Query: 229  GRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDISLALFDEFCEAAELGGDHRM----KPD 396
              ML  G  PHVKAWSAV+SRLA        + ++ LF    +      D  +    +PD
Sbjct: 160  KSMLRSGYLPHVKAWSAVVSRLAASPDDGPAE-AIKLFSLVTQRLRRFADPTITADSRPD 218

Query: 397  AGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLIGVVE 576
              A+N +LN CA  G  +   +L   M+  G  PD LTYN++IKL AR +RKDL++ V+E
Sbjct: 219  TAAYNGVLNACANMGAYEKFLQLFEEMEEFGAEPDVLTYNVMIKLCARANRKDLIVYVLE 278

Query: 577  DMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSASXXXXXXXX 756
             +L+  IP C+TT HS+VAAYVG GDL+ A+ +V A+R G+ DIC ++R           
Sbjct: 279  AILAKDIPMCMTTLHSVVAAYVGFGDLETAEKVVQAMREGKRDICRILRDGYLDEIEDVE 338

Query: 757  XXXXXXX----------------------RTYKPNSQIYTTLMKGYMDRGRLDDMMQVLL 870
                                         + Y PNS+IYTTLMKGYM+ GR+ D +++L 
Sbjct: 339  DLNEDEDELFKKLLPNLNEEIDSEPPLLPKIYSPNSRIYTTLMKGYMNEGRVGDTIRMLE 398

Query: 871  FMQQDSERDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSGYC 1050
             M+   +R   PD VSYTT +SA VK+G M+ A ++  EM+    PAN ITYN+LL GYC
Sbjct: 399  AMRNQGDRSSHPDHVSYTTVVSALVKAGSMDRARQVLAEMTRIGCPANRITYNILLKGYC 458

Query: 1051 R 1053
            R
Sbjct: 459  R 459



 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 1/231 (0%)
 Frame = +1

Query: 355  EAAELGGDHRMKPDAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLY 534
            EA    GD    PD  ++  +++    AG +D A+++++ M  +G   + +TYNIL+K Y
Sbjct: 398  EAMRNQGDRSSHPDHVSYTTVVSALVKAGSMDRARQVLAEMTRIGCPANRITYNILLKGY 457

Query: 535  ARLSRKDLLIGVVEDMLSN-GIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDIC 711
             RL + D    + ++M+   GI P + +++ ++   + + D   A    N +RS      
Sbjct: 458  CRLLQMDKAKDLFKEMVDGAGIEPDVVSYNIMIDGSILVDDSAGALGFFNEMRS------ 511

Query: 712  SLMRSASXXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQDSE 891
                                  +   P    YTTLMK +   G+     +V   M  D  
Sbjct: 512  ----------------------KGIAPTKVSYTTLMKAFAQSGQPKLARKVFDEMLNDPR 549

Query: 892  RDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSG 1044
               + D V++   I  + + G +EEA ++  +M       ++ TY  L +G
Sbjct: 550  --VKVDIVAWNMLIEGYCRLGWIEEAKQLVQKMKENGFFPDVSTYGSLANG 598


>ref|XP_006428878.1| hypothetical protein CICLE_v10011148mg [Citrus clementina]
            gi|568853953|ref|XP_006480600.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like [Citrus sinensis]
            gi|557530935|gb|ESR42118.1| hypothetical protein
            CICLE_v10011148mg [Citrus clementina]
          Length = 740

 Score =  250 bits (638), Expect = 8e-64
 Identities = 140/359 (38%), Positives = 202/359 (56%), Gaps = 24/359 (6%)
 Frame = +1

Query: 49   SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQALDYYALEMXXXXXXRHGDPLFGAQVL 228
            SR +++LSYQ T  ++ RA+ +V       ++  LD  +L +      + G  L+   V+
Sbjct: 98   SRLVSQLSYQNTTLSLSRAQSIVTRLRHDRQLHRLDCNSLGLLAVSAAKSGHTLYATSVI 157

Query: 229  GRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDISLALFDEFCEAAELGGDHRM----KPD 396
              ML  G  PHVKAWS V+SRLA       ++ S+ LF+   +      D  +    KPD
Sbjct: 158  KSMLRSGYLPHVKAWSTVVSRLAASGDDGPVE-SVKLFEVVVKRVRKFSDPDIVSDSKPD 216

Query: 397  AGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLIGVVE 576
              A+NA+LN CA  G+     +L  +M   G  PD LTYN++IKL AR  RK LL+ ++E
Sbjct: 217  TAAYNAVLNACANLGKPKKFLQLFDQMHEFGAKPDVLTYNVMIKLCARARRKHLLVFLLE 276

Query: 577  DMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSAS-------- 732
             +L  GIP C+TTF SLVAAYVG GDL++A+++V A+R GR D+C ++R           
Sbjct: 277  RILEMGIPLCMTTFQSLVAAYVGFGDLEIAESIVQAMREGRRDLCKIIRELDLEDYSSEN 336

Query: 733  ------------XXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFM 876
                                       +T+ PNS+IYTTLMKGYM+ GR+ D +++L  M
Sbjct: 337  EGDDDDEVFEKLLPNSINPSSEPPLLPKTFAPNSRIYTTLMKGYMNEGRVSDTVRMLGAM 396

Query: 877  QQDSERDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSGYCR 1053
            ++  +    PD V+YTT +SA VK+G M+ A ++  EM+   VPAN ITYN+LL GYC+
Sbjct: 397  RRQEDDASHPDHVTYTTVVSALVKAGSMDRARQVLAEMTRIGVPANRITYNILLKGYCQ 455



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 51/225 (22%), Positives = 92/225 (40%), Gaps = 4/225 (1%)
 Frame = +1

Query: 391  PDAGAFNAILNGCAIAGRLDTAQRL---MSRMDSLGVIPDALTYNILIKLYARLSRKDLL 561
            P++  +  ++ G    GR+    R+   M R +     PD +TY  ++    +    D  
Sbjct: 368  PNSRIYTTLMKGYMNEGRVSDTVRMLGAMRRQEDDASHPDHVTYTTVVSALVKAGSMDRA 427

Query: 562  IGVVEDMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSASXXX 741
              V+ +M   G+P    T++ L+  Y     +D AK L+  +                  
Sbjct: 428  RQVLAEMTRIGVPANRITYNILLKGYCQQLQIDKAKELLREMADDA-------------- 473

Query: 742  XXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQDSERDCQPDEVSY 921
                           +P+   Y  L+ G++    +DD    L F  +   R   P ++SY
Sbjct: 474  -------------KIEPDVVSYNILIDGFI---LIDDSAGALTFFNEMRARGIAPTKISY 517

Query: 922  TTAISAFVKSGLMEEAHKIAHEM-SSKKVPANLITYNVLLSGYCR 1053
            TT + AF  S   + A+K+  EM    +V  +++ +N+L+ GYCR
Sbjct: 518  TTLMKAFALSSQPKLANKVFDEMLRDPRVKVDIVAWNMLVEGYCR 562



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 1/224 (0%)
 Frame = +1

Query: 376  DHRMKPDAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKD 555
            D    PD   +  +++    AG +D A+++++ M  +GV  + +TYNIL+K Y +  + D
Sbjct: 401  DDASHPDHVTYTTVVSALVKAGSMDRARQVLAEMTRIGVPANRITYNILLKGYCQQLQID 460

Query: 556  LLIGVVEDMLSNG-IPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSAS 732
                ++ +M  +  I P + +++ L+  ++ + D   A T  N +R+             
Sbjct: 461  KAKELLREMADDAKIEPDVVSYNILIDGFILIDDSAGALTFFNEMRA------------- 507

Query: 733  XXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQDSERDCQPDE 912
                           R   P    YTTLMK +    +     +V   M +D     + D 
Sbjct: 508  ---------------RGIAPTKISYTTLMKAFALSSQPKLANKVFDEMLRDPR--VKVDI 550

Query: 913  VSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSG 1044
            V++   +  + + GL+EEA +I   M       N+ TY  L +G
Sbjct: 551  VAWNMLVEGYCRMGLVEEAKRIIERMKENGFYPNVATYGSLANG 594


>ref|XP_006361774.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like [Solanum tuberosum]
          Length = 738

 Score =  249 bits (635), Expect = 2e-63
 Identities = 142/369 (38%), Positives = 208/369 (56%), Gaps = 23/369 (6%)
 Frame = +1

Query: 16   TSEIEATAKNP---SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQALDYYALEMXXXX 186
            T  ++    NP   SR +++LSYQ +  ++ RA+ +++    + ++  LD  +L +    
Sbjct: 90   TKNLDQQLPNPTCLSRLVSQLSYQNSTISLRRAQSIIQRLRHERQLHRLDANSLGLLASA 149

Query: 187  XXRHGDPLFGAQVLGRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDISLALFDEFCEA-- 360
              + G  L+ A ++  ML+ G  PHVKAWS+V+SRLA       ++ SL LF    +   
Sbjct: 150  AAKGGHVLYAASIIKSMLKSGYLPHVKAWSSVVSRLASSGDDGPIE-SLGLFRAVTKRIR 208

Query: 361  --AELGGDHRMKPDAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLY 534
              + L       PD  A+NA+LN CA  G  +    L + M      PD L+YN++IKL 
Sbjct: 209  RLSNLDLVKHSLPDTAAYNAVLNACANLGDKNRFLELFNEMSEFDCEPDVLSYNVMIKLC 268

Query: 535  ARLSRKDLLIGVVEDMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICS 714
            AR  RKDLL+ V+E +L  GIP C++TF SLVAAYVG GDL  A+ +V A+R GR D+C 
Sbjct: 269  ARGDRKDLLVFVLERILEKGIPLCMSTFQSLVAAYVGFGDLVTAEKVVQAMREGRRDLCK 328

Query: 715  LMRSASXXXXXXXXXXXXXXX----------------RTYKPNSQIYTTLMKGYMDRGRL 846
            ++R  +                               R ++PNS++YTTLMKGYM+ GR+
Sbjct: 329  MLREGNVEEVCLNDSDVFDKLLPNSVNWRDNEPPELSRVFEPNSRMYTTLMKGYMNAGRV 388

Query: 847  DDMMQVLLFMQQDSERDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITY 1026
             DM+++L  M+   + +  PD V+YTT ISAFVK GLM+ A ++  EM    VPAN +TY
Sbjct: 389  TDMVRMLEAMRHLGDSESHPDHVTYTTVISAFVKQGLMDRAREVLAEMVRIGVPANRVTY 448

Query: 1027 NVLLSGYCR 1053
            NVL+ GYC+
Sbjct: 449  NVLIKGYCQ 457



 Score = 75.1 bits (183), Expect = 4e-11
 Identities = 54/230 (23%), Positives = 99/230 (43%)
 Frame = +1

Query: 355  EAAELGGDHRMKPDAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLY 534
            EA    GD    PD   +  +++     G +D A+ +++ M  +GV  + +TYN+LIK Y
Sbjct: 396  EAMRHLGDSESHPDHVTYTTVISAFVKQGLMDRAREVLAEMVRIGVPANRVTYNVLIKGY 455

Query: 535  ARLSRKDLLIGVVEDMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICS 714
             +    D+   ++++M+  GI P + ++++++   + + D   A +  N +R+       
Sbjct: 456  CQQLHIDMAEELIKEMIDTGIEPDVVSYNTIIDGCILVDDCAGALSYFNEMRA------- 508

Query: 715  LMRSASXXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQDSER 894
                                 R   P    YTTLMK +   G+     +V   M +D   
Sbjct: 509  ---------------------RGIAPTKVSYTTLMKAFASSGQAKLANKVFDEMLKDPR- 546

Query: 895  DCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSG 1044
              + D V++   + A+ K G +EEA  +   M       N+ TY  L +G
Sbjct: 547  -VKVDLVAWNMLVDAYSKLGKVEEAKSVIERMKENGFYPNVATYGSLANG 595


>gb|EXC16278.1| hypothetical protein L484_024452 [Morus notabilis]
          Length = 749

 Score =  247 bits (630), Expect = 6e-63
 Identities = 141/358 (39%), Positives = 195/358 (54%), Gaps = 23/358 (6%)
 Frame = +1

Query: 49   SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQALDYYALEMXXXXXXRHGDPLFGAQVL 228
            SR +++LSYQ T  ++ RA+ ++     + ++  LD  +L +      + G   + A V+
Sbjct: 105  SRLVSQLSYQNTHVSLTRAQSILTRLRNERQLARLDANSLGLLAVAAAKAGQTRYAASVI 164

Query: 229  GRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDISLALFDEFCEAA------ELGGDHRMK 390
              ML  G  PHVK+WSAV SRLA          +L +F             EL  D R  
Sbjct: 165  KSMLRSGYLPHVKSWSAVASRLAASGDECGPAEALKMFRSVTRRVRQFANGELAADSR-- 222

Query: 391  PDAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLIGV 570
            PD GAFNA+LN CA  G      +L   M   G  PD L+YN++IKL  R  RKDLL+ V
Sbjct: 223  PDTGAFNAVLNACANCGDTRMFLKLFDEMPEWGCGPDVLSYNVMIKLCTRAGRKDLLVFV 282

Query: 571  VEDMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSAS------ 732
            +E +L   IP C+TT HSLVAAYVG GDL+ A+ +V A+R  R D+C ++R ++      
Sbjct: 283  LERILEEEIPFCMTTMHSLVAAYVGFGDLETAERMVQAMREERRDLCEILRGSNVEDSNR 342

Query: 733  -----------XXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQ 879
                                      + Y P+S+IYTTLMKGYM  GR+ D +++L  M+
Sbjct: 343  NEQDVFERLLPNLVKASDSEQPQLLPKAYAPDSRIYTTLMKGYMKAGRVTDTVRMLEAMR 402

Query: 880  QDSERDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSGYCR 1053
               +    PD VSYTT +SAFV SG M+ A ++  EM+  +VPAN ITYN+LL GYC+
Sbjct: 403  HQEDSASHPDHVSYTTVVSAFVNSGSMDRARQVFAEMTRIRVPANRITYNILLKGYCK 460



 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 1/231 (0%)
 Frame = +1

Query: 355  EAAELGGDHRMKPDAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLY 534
            EA     D    PD  ++  +++    +G +D A+++ + M  + V  + +TYNIL+K Y
Sbjct: 399  EAMRHQEDSASHPDHVSYTTVVSAFVNSGSMDRARQVFAEMTRIRVPANRITYNILLKGY 458

Query: 535  ARLSRKDLLIGVVEDMLSN-GIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDIC 711
             +  + D    ++++M  + GI P + +++ L+   + + D   A T  N +R+      
Sbjct: 459  CKQLQIDKAKELLKEMAEDAGIEPDVVSYNILIDGCILVDDSAGALTFFNEMRA------ 512

Query: 712  SLMRSASXXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQDSE 891
                                  +   P    YTTLMK +   G+     +V   M  D  
Sbjct: 513  ----------------------KGIAPTKISYTTLMKAFALSGQPKLAHKVFDEMLDDPR 550

Query: 892  RDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSG 1044
               + D +++   +  + K GL+EEA KI   M       N+ TY  L +G
Sbjct: 551  --VKADIIAWNMLVEGYCKLGLVEEAKKIVQRMKENGFHPNVATYGSLANG 599


>gb|EMJ07627.1| hypothetical protein PRUPE_ppa001926mg [Prunus persica]
          Length = 740

 Score =  246 bits (628), Expect = 1e-62
 Identities = 142/359 (39%), Positives = 197/359 (54%), Gaps = 24/359 (6%)
 Frame = +1

Query: 49   SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQALDYYALEMXXXXXXRHGDPLFGAQVL 228
            SR +++LSYQ +   + RA+ ++     + +++ LD  +L +      + G   + A ++
Sbjct: 107  SRLLSQLSYQNSHSGLTRAQSIITRLRNERQLRHLDANSLGLLAVAAAKAGQTRYAASIV 166

Query: 229  GRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDISLALFDEFCEAA------ELGGDHRMK 390
              ML  G  PHVKAWSAV+SRLA        D +L LF             EL  D R  
Sbjct: 167  KSMLRSGFLPHVKAWSAVVSRLAATGDDGPAD-ALKLFHSVTRRVRRFSEPELVADSR-- 223

Query: 391  PDAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLIGV 570
            PD  AFNA LN CA  G      +L   M   G  PD LTYN++IKL AR+ RKDLL+ V
Sbjct: 224  PDTAAFNAALNACANLGDTKRFLKLFDEMPEYGAEPDVLTYNVMIKLCARVGRKDLLVFV 283

Query: 571  VEDMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSAS------ 732
            +E +L  GI  C+TT +SLVAAYVG GDL+ A+ +V A+R GR D+C ++R  +      
Sbjct: 284  LERILDKGITLCLTTLNSLVAAYVGFGDLETAEQMVQAMREGRRDLCKILRDLNSNNSKS 343

Query: 733  ------------XXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFM 876
                                       + Y  NS+IYTTLMKGYM+ GR+ D +++L  +
Sbjct: 344  SLSDGDVFEKLLPNSVRANDCEPPLLPKAYTCNSRIYTTLMKGYMNVGRVTDTVRMLEAL 403

Query: 877  QQDSERDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSGYCR 1053
            +   +    PD V+YTT ISAFVK+G M+ A ++  EM+   VPAN ITYN+LL GYC+
Sbjct: 404  RHQDDSSSHPDHVTYTTVISAFVKAGSMDRARRVLAEMTRVGVPANRITYNILLKGYCQ 462



 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 1/231 (0%)
 Frame = +1

Query: 355  EAAELGGDHRMKPDAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLY 534
            EA     D    PD   +  +++    AG +D A+R+++ M  +GV  + +TYNIL+K Y
Sbjct: 401  EALRHQDDSSSHPDHVTYTTVISAFVKAGSMDRARRVLAEMTRVGVPANRITYNILLKGY 460

Query: 535  ARLSRKDLLIGVVEDMLSN-GIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDIC 711
             +  + D    ++ +M  + GI P + +++ L+   + + D   A    N +R+      
Sbjct: 461  CQQLQIDQAKELLREMADDAGIEPDVVSYNILIDGCILVDDSAGALGFFNEMRT------ 514

Query: 712  SLMRSASXXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQDSE 891
                                  R   P    YTTLMK +   G+     +V   M  D  
Sbjct: 515  ----------------------RGLAPTKISYTTLMKAFALSGQPKLANKVFDEMLNDPR 552

Query: 892  RDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSG 1044
               + D V++   + A+ + GL+EEA KI   +       ++ TY  L +G
Sbjct: 553  --VKADLVAWNMLVEAYCRMGLVEEAKKIIQRIKDNGFHPDVATYGSLANG 601


>gb|EOY07747.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
            cacao]
          Length = 758

 Score =  242 bits (617), Expect = 2e-61
 Identities = 139/375 (37%), Positives = 198/375 (52%), Gaps = 40/375 (10%)
 Frame = +1

Query: 49   SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQALDYYALEMXXXXXXRHGDPLFGAQVL 228
            SR + +LSYQ T  ++ RA+ ++     + ++  LD  +L +      + G  L+ + ++
Sbjct: 110  SRLVAQLSYQTTPLSLTRARSIITRLRNERQLHRLDANSLGLLASASAKSGHTLYASSLI 169

Query: 229  GRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDISLALFDEFCEAAELGGDHRM----KPD 396
              ML  G  PHVKAWSAV+SRL+  +   S++    LFD          D  +    KPD
Sbjct: 170  KSMLRSGYLPHVKAWSAVVSRLSTESPSESIN----LFDSVTRRVRRFADPTIVADSKPD 225

Query: 397  AGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLIGVVE 576
              A+NA+LN CA  G      +L   M   G  PD LTYN++IKL AR  RKDLL+ V+E
Sbjct: 226  TAAYNAVLNACANLGDKSKFLKLFEEMSEWGCEPDVLTYNVMIKLLARADRKDLLVFVLE 285

Query: 577  DMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSAS-------- 732
             ++   I  C+TT HSLVAAYVG  DL+ A+ +V A+R  R D+C ++R A+        
Sbjct: 286  RIVEKRIRLCMTTLHSLVAAYVGFDDLETAERIVQAMREQRNDLCKILRDANLEDLNQAE 345

Query: 733  ----------------------------XXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGY 828
                                                       + Y PNS+IYTTLMKGY
Sbjct: 346  EDEEEEEEEENRKDLSQNEKDDIVFEKLLPNSIKPSSEARLLPKVYAPNSRIYTTLMKGY 405

Query: 829  MDRGRLDDMMQVLLFMQQDSERDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVP 1008
            M  GR+ D +++L  M+   ++   PD V+YTT +SAFVK+GLM+ A ++  EM+   VP
Sbjct: 406  MKAGRVSDTVRMLEAMRHQGDKASHPDHVTYTTVVSAFVKAGLMDRAREVLAEMTRIGVP 465

Query: 1009 ANLITYNVLLSGYCR 1053
            AN ITYN+LL GYC+
Sbjct: 466  ANWITYNILLKGYCQ 480



 Score = 67.4 bits (163), Expect = 9e-09
 Identities = 57/231 (24%), Positives = 97/231 (41%), Gaps = 1/231 (0%)
 Frame = +1

Query: 355  EAAELGGDHRMKPDAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLY 534
            EA    GD    PD   +  +++    AG +D A+ +++ M  +GV  + +TYNIL+K Y
Sbjct: 419  EAMRHQGDKASHPDHVTYTTVVSAFVKAGLMDRAREVLAEMTRIGVPANWITYNILLKGY 478

Query: 535  ARLSRKDLLIGVVEDMLSNG-IPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDIC 711
             +  + D    ++ +M  +  I P + +++ L+   + + D   A    N +R       
Sbjct: 479  CQQLQIDKAKELLREMADDAEIKPDVVSYNILIDGCILIDDSAGALAFFNEMRE------ 532

Query: 712  SLMRSASXXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQDSE 891
                                  R   P    YTTLMK +   G+     +V   M +D  
Sbjct: 533  ----------------------RGIAPTKISYTTLMKAFALSGQPKLANKVFDEMLRDPR 570

Query: 892  RDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSG 1044
               + D V++   +  + + GL+EEA KI   M  K    N+ TY  L +G
Sbjct: 571  --VKVDLVAWNMLVEGYSRLGLVEEAKKIIQRMKEKGFYPNVATYGSLANG 619


>ref|XP_002322855.2| hypothetical protein POPTR_0016s08650g [Populus trichocarpa]
            gi|550321129|gb|EEF04616.2| hypothetical protein
            POPTR_0016s08650g [Populus trichocarpa]
          Length = 724

 Score =  241 bits (614), Expect = 5e-61
 Identities = 140/366 (38%), Positives = 199/366 (54%), Gaps = 31/366 (8%)
 Frame = +1

Query: 49   SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQALDYYALEMXXXXXXRHGDPLFGAQVL 228
            SR +++LSYQ T  ++ RA+ ++     + ++  LD  +L +      + G   +   ++
Sbjct: 81   SRLVSQLSYQNTPLSLRRAQSILTRLRHECQLHRLDANSLGLLAVSATKSGQLSYAFSLI 140

Query: 229  GRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDISLALFDEFCEAAELGGDHRM----KPD 396
              ML  G  PHVKAWSAVLSRLA  A       +L LF+          D  M    +PD
Sbjct: 141  NSMLRSGYLPHVKAWSAVLSRLAS-APDGGPTRALKLFNTITRRVRRFSDVTMVADSRPD 199

Query: 397  AGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLIGVVE 576
              AFN +LN CA  G      +L   M   G+ PD LTYNI+IKL AR +RKDLL+ V+E
Sbjct: 200  TAAFNNVLNACANLGDGKMFLKLFEEMPDFGLEPDILTYNIMIKLCARCNRKDLLVFVLE 259

Query: 577  DMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSAS-------- 732
             ++  GIP C+TT HSLVAAYVG GDL+  + +V A+R GR D+C ++R A+        
Sbjct: 260  RVIEKGIPLCMTTLHSLVAAYVGFGDLETVERMVQAMREGRRDLCKILREANLEDFNEDE 319

Query: 733  -------------------XXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDM 855
                                              + + P+S+I+TTLMKGYM +GR+ D 
Sbjct: 320  ENEVLDSSQIGVSVFEKLLPNLVEVSNSEPPLLPKVFAPDSRIFTTLMKGYMKQGRVTDT 379

Query: 856  MQVLLFMQQDSERDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVL 1035
            +++L  M+   +   QPD ++YTT ISA VK+G M+ A ++  EM+   VPAN ITYN+L
Sbjct: 380  VRMLEAMRCQDDSKGQPDHITYTTVISALVKAGSMDPARQVLAEMTRIGVPANRITYNIL 439

Query: 1036 LSGYCR 1053
            L GYC+
Sbjct: 440  LKGYCQ 445



 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 5/226 (2%)
 Frame = +1

Query: 391  PDAGAFNAILNGCAIAGRLDTAQRLMSRM----DSLGVIPDALTYNILIKLYARLSRKDL 558
            PD+  F  ++ G    GR+    R++  M    DS G  PD +TY  +I    +    D 
Sbjct: 358  PDSRIFTTLMKGYMKQGRVTDTVRMLEAMRCQDDSKGQ-PDHITYTTVISALVKAGSMDP 416

Query: 559  LIGVVEDMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSASXX 738
               V+ +M   G+P    T++ L+  Y     +D AK L+  +     D+          
Sbjct: 417  ARQVLAEMTRIGVPANRITYNILLKGYCQQLQIDKAKELLKEMAD---DV---------- 463

Query: 739  XXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQDSERDCQPDEVS 918
                            +P+   Y TL+ G +    +DD    L F  +   +   P ++S
Sbjct: 464  --------------NIEPDVVSYNTLIDGCI---LVDDSAGALAFFNEMRTKGIMPTKIS 506

Query: 919  YTTAISAFVKSGLMEEAHKIAHEM-SSKKVPANLITYNVLLSGYCR 1053
            YTT + AF  SG  + A+K+  EM    +V A+L+ +N+LL GYCR
Sbjct: 507  YTTLMKAFALSGQPKLANKVFDEMLKDPRVKADLVAWNMLLEGYCR 552


>ref|XP_002525184.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535481|gb|EEF37150.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 740

 Score =  236 bits (602), Expect = 1e-59
 Identities = 134/371 (36%), Positives = 197/371 (53%), Gaps = 36/371 (9%)
 Frame = +1

Query: 49   SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQALDYYALEMXXXXXXRHGDPLFGAQVL 228
            SR +++LSYQ T  ++ RA+ ++    ++ ++  LD  +L +      + G   +   ++
Sbjct: 93   SRLVSQLSYQNTPLSLSRAQSILTRLRQERQLHRLDANSLGLLAVSATKSGQLSYAVSLI 152

Query: 229  GRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDISLALFDEFCEAAELGGDHRM----KPD 396
              ML  G  PHVKAWSAV+SRL+  +       ++ LF+          D  +     PD
Sbjct: 153  NSMLRSGYLPHVKAWSAVISRLSS-SPDDGPQQAIKLFNSITRRVRRFNDAALVADSNPD 211

Query: 397  AGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLIGVVE 576
              AFN++LN CA  G      +L  +M   G  PD LTYN++IKL AR  RKDLL+ V+E
Sbjct: 212  TAAFNSVLNACANLGDGKMFLQLFDQMSEFGAEPDILTYNVMIKLCARCDRKDLLVFVLE 271

Query: 577  DMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSAS-------- 732
             ++   IP C+TT HSLVAAYVG GDL+ A+ +  A+R GR D+C ++R  +        
Sbjct: 272  RVIQKRIPLCMTTLHSLVAAYVGFGDLETAEIMAQAMREGRRDLCKILREVNMEDLGYYG 331

Query: 733  ------------------------XXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRG 840
                                                   + Y P+S+IYTTLMKGYM++G
Sbjct: 332  EDVIENSQRLDQNRKNMFVFEKLLPNSIQSGDTEPSLLPKVYAPDSRIYTTLMKGYMNQG 391

Query: 841  RLDDMMQVLLFMQQDSERDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLI 1020
            R+ D +++L  M+   +    PD VSYTT ISA VK+G M+ A ++  EM+   VPAN I
Sbjct: 392  RVSDTIRMLEAMRHQDDNASHPDHVSYTTVISALVKAGSMDRARQVLAEMTRIGVPANRI 451

Query: 1021 TYNVLLSGYCR 1053
            TYN+LL G+C+
Sbjct: 452  TYNILLKGHCQ 462


>ref|XP_004497462.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like isoform X2 [Cicer arietinum]
          Length = 732

 Score =  235 bits (599), Expect = 3e-59
 Identities = 137/365 (37%), Positives = 194/365 (53%), Gaps = 30/365 (8%)
 Frame = +1

Query: 49   SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQALDYYALEMXXXXXXRHGDPLFGAQVL 228
            SR +++LSY  T  ++ RA+ ++     + ++  LD  +L +      + G  L+ + V+
Sbjct: 84   SRLVSQLSYHNTPSSLTRAQSILTRLRNESQLHRLDSNSLGLLAVAAAKSGHTLYASSVV 143

Query: 229  GRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDISLALFDEFC----EAAELGGDHRMKPD 396
              ML  G  PHVKAWSAV+SRLA     S    ++ LF        +  EL      +PD
Sbjct: 144  KSMLRSGYLPHVKAWSAVVSRLASDDDSSGPIEAIRLFHAVTRRLRKLPELDMAAESRPD 203

Query: 397  AGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLIGVVE 576
              AFNA LN CA  G      ++   M   GV+PD+L+YNI++KL     RKDLL+ V+E
Sbjct: 204  TVAFNAALNACANLGNGKMFLQVFDEMPQFGVVPDSLSYNIVMKLCVGNDRKDLLVFVLE 263

Query: 577  DMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSAS-------- 732
             +L   IP C+TT HSLVAAYV   DL+ A+ +V A+R  R D+C +MR ++        
Sbjct: 264  RILQLNIPLCMTTLHSLVAAYVDFNDLETAEKIVQAMREKRRDLCRIMRESNSYYSVENY 323

Query: 733  ------------------XXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMM 858
                                             + Y PN++IYTTLMKGYM  GR+ D +
Sbjct: 324  YDDVDPVFHKLLPNLMMDKSGNDANGNDPPLLPKAYTPNTRIYTTLMKGYMKAGRVSDTV 383

Query: 859  QVLLFMQQDSERDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLL 1038
            ++L  M+   +    PD VSYTT +SA VK+G M+ A ++  EM+   VPAN ITYN+LL
Sbjct: 384  RMLEAMRCQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVPANRITYNILL 443

Query: 1039 SGYCR 1053
             GYCR
Sbjct: 444  KGYCR 448



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 1/231 (0%)
 Frame = +1

Query: 355  EAAELGGDHRMKPDAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLY 534
            EA     D    PD  ++  +++    AG +D A+++++ M  +GV  + +TYNIL+K Y
Sbjct: 387  EAMRCQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVPANRITYNILLKGY 446

Query: 535  ARLSRKDLLIGVVEDMLSN-GIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDIC 711
             R  + D    +++DM  + GI P + +++ L+   + + D   A +  N +R       
Sbjct: 447  CRQLQMDKARELLKDMTEDIGIQPDVVSYNILIDGCILVDDSAGALSFFNEMR------- 499

Query: 712  SLMRSASXXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQDSE 891
                                  R   P    YTTLMK +   G+     +V   M  D  
Sbjct: 500  ---------------------VRGIAPTKISYTTLMKAFALSGQPKLAQRVFDEMMNDPR 538

Query: 892  RDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSG 1044
               + D +++   +  + + GL+EEA K+  +M       ++ TY  L +G
Sbjct: 539  --VRVDLIAWNMLVEGYSRLGLVEEAKKVIQKMKENGFHPDVSTYGSLANG 587


>ref|XP_004497461.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like isoform X1 [Cicer arietinum]
          Length = 732

 Score =  235 bits (599), Expect = 3e-59
 Identities = 137/365 (37%), Positives = 194/365 (53%), Gaps = 30/365 (8%)
 Frame = +1

Query: 49   SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQALDYYALEMXXXXXXRHGDPLFGAQVL 228
            SR +++LSY  T  ++ RA+ ++     + ++  LD  +L +      + G  L+ + V+
Sbjct: 84   SRLVSQLSYHNTPSSLTRAQSILTRLRNESQLHRLDSNSLGLLAVAAAKSGHTLYASSVV 143

Query: 229  GRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDISLALFDEFC----EAAELGGDHRMKPD 396
              ML  G  PHVKAWSAV+SRLA     S    ++ LF        +  EL      +PD
Sbjct: 144  KSMLRSGYLPHVKAWSAVVSRLASDDDSSGPIEAIRLFHAVTRRLRKLPELDMAAESRPD 203

Query: 397  AGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLIGVVE 576
              AFNA LN CA  G      ++   M   GV+PD+L+YNI++KL     RKDLL+ V+E
Sbjct: 204  TVAFNAALNACANLGNGKMFLQVFDEMPQFGVVPDSLSYNIVMKLCVGNDRKDLLVFVLE 263

Query: 577  DMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSAS-------- 732
             +L   IP C+TT HSLVAAYV   DL+ A+ +V A+R  R D+C +MR ++        
Sbjct: 264  RILQLNIPLCMTTLHSLVAAYVDFNDLETAEKIVQAMREKRRDLCRIMRESNSYYSVENY 323

Query: 733  ------------------XXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMM 858
                                             + Y PN++IYTTLMKGYM  GR+ D +
Sbjct: 324  YDDVDPVFHKLLPNLMMDKSGNDANGNDPPLLPKAYTPNTRIYTTLMKGYMKAGRVSDTV 383

Query: 859  QVLLFMQQDSERDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLL 1038
            ++L  M+   +    PD VSYTT +SA VK+G M+ A ++  EM+   VPAN ITYN+LL
Sbjct: 384  RMLEAMRCQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVPANRITYNILL 443

Query: 1039 SGYCR 1053
             GYCR
Sbjct: 444  KGYCR 448



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 1/231 (0%)
 Frame = +1

Query: 355  EAAELGGDHRMKPDAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLY 534
            EA     D    PD  ++  +++    AG +D A+++++ M  +GV  + +TYNIL+K Y
Sbjct: 387  EAMRCQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVPANRITYNILLKGY 446

Query: 535  ARLSRKDLLIGVVEDMLSN-GIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDIC 711
             R  + D    +++DM  + GI P + +++ L+   + + D   A +  N +R       
Sbjct: 447  CRQLQMDKARELLKDMTEDIGIQPDVVSYNILIDGCILVDDSAGALSFFNEMR------- 499

Query: 712  SLMRSASXXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQDSE 891
                                  R   P    YTTLMK +   G+     +V   M  D  
Sbjct: 500  ---------------------VRGIAPTKISYTTLMKAFALSGQPKLAQRVFDEMMNDPR 538

Query: 892  RDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSG 1044
               + D +++   +  + + GL+EEA K+  +M       ++ TY  L +G
Sbjct: 539  --VRVDLIAWNMLVEGYSRLGLVEEAKKVIQKMKENGFHPDVSTYGSLANG 587


>ref|XP_002967672.1| hypothetical protein SELMODRAFT_88400 [Selaginella moellendorffii]
            gi|300164410|gb|EFJ31019.1| hypothetical protein
            SELMODRAFT_88400 [Selaginella moellendorffii]
          Length = 717

 Score =  229 bits (584), Expect = 1e-57
 Identities = 134/342 (39%), Positives = 196/342 (57%), Gaps = 8/342 (2%)
 Frame = +1

Query: 49   SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQAL-DYYALEMXXXXXXRHGDPLFGAQV 225
            SR + +L +QGT  +V +A++++ E  +K ++  L D  A+ +      R G   +   V
Sbjct: 109  SRLVAQLCHQGTAASVSKAQQIMVELRQKRKVSELVDCDAMGLLVMASARVGTAHYSLGV 168

Query: 226  LGRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDISLALFDEFCEAAELGGD-------HR 384
            L  MLE+G  P VK WSAV+S+L K+   + L  +L +FDE C+     G         R
Sbjct: 169  LRTMLELGYHPPVKVWSAVVSKLGKNVDDAQL--ALKVFDEVCQCVVEQGMIQLHRKMER 226

Query: 385  MKPDAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLI 564
            MKPD GAFNA LN CA  G L+ A++L   M + GV  + LT+N++IKLYAR+ + D L 
Sbjct: 227  MKPDTGAFNAALNACANIGNLERAEQLWELMPAFGVKANTLTFNVMIKLYARVEKLDKLE 286

Query: 565  GVVEDMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSASXXXX 744
             ++  M    + P  TTF+SLVAA+VGLG+L LA+++V +LR                  
Sbjct: 287  QILHTMADADVDPDATTFNSLVAAFVGLGELSLAESIVQSLRG---------EGEHQKRV 337

Query: 745  XXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQDSERDCQPDEVSYT 924
                         ++P+ + YTTLMKGY+   R+ D MQ+L+ MQQ+      P+EV++T
Sbjct: 338  PALLPKLREHSAKFQPDVRTYTTLMKGYVQHNRVSDAMQLLVAMQQEKTSAAMPNEVTFT 397

Query: 925  TAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSGYC 1050
            TAI A  K GL++EA  I  EM+++KV AN++TYN LL G C
Sbjct: 398  TAIRACAKMGLLDEARVILQEMATQKVAANVVTYNTLLQGVC 439


>ref|XP_002963977.1| hypothetical protein SELMODRAFT_82002 [Selaginella moellendorffii]
            gi|300167706|gb|EFJ34310.1| hypothetical protein
            SELMODRAFT_82002 [Selaginella moellendorffii]
          Length = 716

 Score =  228 bits (582), Expect = 2e-57
 Identities = 133/342 (38%), Positives = 196/342 (57%), Gaps = 8/342 (2%)
 Frame = +1

Query: 49   SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQAL-DYYALEMXXXXXXRHGDPLFGAQV 225
            SR + +L +QGT  +V +A++++ E  +K ++  L D  A+ +      R G   +   V
Sbjct: 108  SRLVAQLCHQGTAASVSKAQQIMVELRQKRKVSELVDCDAMGLLVMASARVGTAHYSLGV 167

Query: 226  LGRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDISLALFDEFCEAAELGGD-------HR 384
            L  MLE+G  P VK WSA++S+L K+   + L  +L +FDE C+     G         R
Sbjct: 168  LRTMLELGYHPPVKVWSALVSKLGKNVDDAQL--ALKVFDEVCQCVAEQGMIQLHRKMER 225

Query: 385  MKPDAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLI 564
            MKPD GAFNA LN CA  G L+ A++L   M + GV  + LT+N++IKLYAR+ + D L 
Sbjct: 226  MKPDTGAFNAALNACANIGNLERAEQLWELMPAFGVKANTLTFNVMIKLYARVEKLDKLE 285

Query: 565  GVVEDMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSASXXXX 744
             ++  M    + P  TTF+SLVAA+VGLG+L LA+++V +LR                  
Sbjct: 286  QILHTMADADVDPDATTFNSLVAAFVGLGELSLAESIVQSLRG---------EGEHQTRV 336

Query: 745  XXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQDSERDCQPDEVSYT 924
                         ++P+ + YTTLMKGY+   R+ D MQ+L+ MQQ+      P+EV++T
Sbjct: 337  PALLPKLREHSAKFQPDVRTYTTLMKGYVQHNRVSDAMQLLVAMQQEKTSAAMPNEVTFT 396

Query: 925  TAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSGYC 1050
            TAI A  K GL++EA  I  EM+++KV AN++TYN LL G C
Sbjct: 397  TAIRACAKMGLLDEARVILQEMATQKVAANVVTYNTLLQGVC 438


>gb|ESW16523.1| hypothetical protein PHAVU_007G163500g [Phaseolus vulgaris]
          Length = 713

 Score =  227 bits (578), Expect = 7e-57
 Identities = 136/374 (36%), Positives = 196/374 (52%), Gaps = 39/374 (10%)
 Frame = +1

Query: 49   SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQALDYYALEMXXXXXXRHGDPLFGAQVL 228
            SR +++LSYQ T  ++ RA+ +V     + ++  LD   L +      + G  L+ A VL
Sbjct: 58   SRLVSQLSYQNTLSSLTRAQSIVTRLRHERQLHRLDANCLGLLAVAATKSGHTLYAASVL 117

Query: 229  GRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDI-SLALFDEFCEAAELGGDHRMK----P 393
              M+  G  PHVKAW+AV++RL+  +AP    + ++ LF           +  M     P
Sbjct: 118  RSMIRSGYLPHVKAWTAVVARLS--SAPDDGPVEAIKLFRSVTRRLRKLPEKDMAVASHP 175

Query: 394  DAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLIGVV 573
            D  A NA+LN CA  G      ++   M    V PDAL+YN +IKL  ++ RKDLL+ V+
Sbjct: 176  DTTAINAVLNACANLGDAKAFLQVFDEMPQFDVAPDALSYNTMIKLCCKIGRKDLLLFVL 235

Query: 574  EDMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSAS------- 732
            E +L  GIP C+TT  +LV+AYV  GDL+ A+ LV A+R  R DIC ++R  S       
Sbjct: 236  ERILQLGIPFCVTTLQALVSAYVEFGDLETAEKLVQAMREQRRDICWVLRECSNLEYSSG 295

Query: 733  ---------------------------XXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYM 831
                                                      + Y PN++ YTTLMKGYM
Sbjct: 296  NESDYDSNNDSNNDEDENCVFEKLLPNLVDQSGNEAEPPLLPKGYAPNTRTYTTLMKGYM 355

Query: 832  DRGRLDDMMQVLLFMQQDSERDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPA 1011
            + GR++D +++L  M+   ++   PD VSYTT +SA VK G M+ A ++  EM+   VPA
Sbjct: 356  NAGRVNDTVRMLEAMRHQDDKGSHPDHVSYTTVVSALVKVGSMDRAREVLAEMTRIGVPA 415

Query: 1012 NLITYNVLLSGYCR 1053
            NLITYN+LL GYC+
Sbjct: 416  NLITYNILLKGYCK 429



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 54/234 (23%), Positives = 102/234 (43%), Gaps = 4/234 (1%)
 Frame = +1

Query: 355  EAAELGGDHRMKPDAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLY 534
            EA     D    PD  ++  +++     G +D A+ +++ M  +GV  + +TYNIL+K Y
Sbjct: 368  EAMRHQDDKGSHPDHVSYTTVVSALVKVGSMDRAREVLAEMTRIGVPANLITYNILLKGY 427

Query: 535  ARLSR----KDLLIGVVEDMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRL 702
             +  +    K+LL  +V+D    GI   + +++ L+   + + D   A +  N +R+   
Sbjct: 428  CKQLQINKAKELLKEMVDDA---GIQSDVVSYNILIDGCILVDDSAGALSFFNEMRA--- 481

Query: 703  DICSLMRSASXXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQ 882
                                     R   P    YTTLMK +   G+    +   +F + 
Sbjct: 482  -------------------------RGIAPTKISYTTLMKAFAYSGQ--PKLAHKVFNEM 514

Query: 883  DSERDCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSG 1044
            D++   + D +++   +  + K GL+EEA K+  +M    +  +  TY  L +G
Sbjct: 515  DNDPRVKVDLIAWNMLVEGYCKLGLVEEAKKVVQKMKDSGLHPDASTYGSLANG 568


>ref|XP_001770673.1| predicted protein [Physcomitrella patens] gi|162678034|gb|EDQ64497.1|
            predicted protein [Physcomitrella patens]
          Length = 717

 Score =  226 bits (575), Expect = 2e-56
 Identities = 133/339 (39%), Positives = 188/339 (55%), Gaps = 5/339 (1%)
 Frame = +1

Query: 49   SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQALDYYALEMXXXXXXRHGDPLFGAQVL 228
            SR + +LS++G    + RA++++    +  ++  LD  +L +      R G   +   VL
Sbjct: 128  SRLVAQLSHRGVPSCLARAQQVLTNLRKNNQVDLLDSDSLGLLALASARSGAARYALNVL 187

Query: 229  GRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDISLALFDEFC----EAAELGGDHRM-KP 393
              M EM + P VK WSAV+SRL +H     L  +L LFDE C    EA   G D R  +P
Sbjct: 188  NLMFEMDIYPSVKVWSAVVSRLGRHVDDCLL--ALELFDEVCRLIEEAESQGIDVRSARP 245

Query: 394  DAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLIGVV 573
            D GAFNA LN CA  G     + LM+ M   G+ PD++T+N LIKLYA+  ++ LL  + 
Sbjct: 246  DTGAFNAALNACATLGFAAKGEDLMNSMRRCGLQPDSITFNTLIKLYAKCDQRKLLKSLP 305

Query: 574  EDMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSASXXXXXXX 753
            ++M+ N + P  +T +SL+A YVGLGDL  A+ L+  L+             S       
Sbjct: 306  DEMVENKVMPDESTVNSLIAGYVGLGDLREAEALLRRLQD-----------KSEQGNDSK 354

Query: 754  XXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQVLLFMQQDSERDCQPDEVSYTTAI 933
                       +P+ + YTTLMKGY+ +GR  D M+ LL MQ D +    P+EVSYTTAI
Sbjct: 355  TKSKSWWGAHLRPDVRTYTTLMKGYVQKGRRSDAMRTLLAMQMDKDPRSSPNEVSYTTAI 414

Query: 934  SAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSGYC 1050
            S+ V+ GLM+EA  +  EM    +P N+ITYN+LL GYC
Sbjct: 415  SSCVRLGLMDEATVVLQEMLKHNIPVNVITYNILLKGYC 453



 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 52/231 (22%), Positives = 99/231 (42%), Gaps = 1/231 (0%)
 Frame = +1

Query: 358  AAELGGDHRMKPDAGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYA 537
            A ++  D R  P+  ++   ++ C   G +D A  ++  M    +  + +TYNIL+K Y 
Sbjct: 394  AMQMDKDPRSSPNEVSYTTAISSCVRLGLMDEATVVLQEMLKHNIPVNVITYNILLKGYC 453

Query: 538  RLSRKDLLIGVVEDMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSL 717
               +      VV+DM   G+   + ++++L+   +  GD            +  LD    
Sbjct: 454  SARKLQKAHSVVKDMEEAGVALDVVSYNTLINGCIETGD-----------NAAALDYFKK 502

Query: 718  MRSASXXXXXXXXXXXXXXXRTYKPNSQIYTTLMKGYMDRGRLDDMMQV-LLFMQQDSER 894
            MR                      P++  YTTLMK +   GR     QV L+F +  ++ 
Sbjct: 503  MRETG-----------------ISPSAVSYTTLMKAF---GRNGQPKQVHLVFEEMRNDP 542

Query: 895  DCQPDEVSYTTAISAFVKSGLMEEAHKIAHEMSSKKVPANLITYNVLLSGY 1047
              + D V++   + ++ ++G + +A ++  +M   +V     TY  L+ GY
Sbjct: 543  RMKTDAVAWNVLLDSYCRNGRVADAKRMFLQMKEDRVLPTAFTYATLVKGY 593



 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 40/146 (27%), Positives = 69/146 (47%)
 Frame = +1

Query: 100 RAKEMVREYEEKGEIQALDYYALEMXXXXXXRHGDPLFGAQVLGRMLEMGMAPHVKAWSA 279
           +A  +V++ EE G   ALD  +           GD         +M E G++P   +++ 
Sbjct: 460 KAHSVVKDMEEAGV--ALDVVSYNTLINGCIETGDNAAALDYFKKMRETGISPSAVSYTT 517

Query: 280 VLSRLAKHAAPSSLDISLALFDEFCEAAELGGDHRMKPDAGAFNAILNGCAIAGRLDTAQ 459
           ++    ++  P  + +   +F+E      +  D RMK DA A+N +L+     GR+  A+
Sbjct: 518 LMKAFGRNGQPKQVHL---VFEE------MRNDPRMKTDAVAWNVLLDSYCRNGRVADAK 568

Query: 460 RLMSRMDSLGVIPDALTYNILIKLYA 537
           R+  +M    V+P A TY  L+K YA
Sbjct: 569 RMFLQMKEDRVLPTAFTYATLVKGYA 594


>ref|XP_006407654.1| hypothetical protein EUTSA_v10020113mg [Eutrema salsugineum]
            gi|557108800|gb|ESQ49107.1| hypothetical protein
            EUTSA_v10020113mg [Eutrema salsugineum]
          Length = 777

 Score =  223 bits (568), Expect = 1e-55
 Identities = 130/384 (33%), Positives = 193/384 (50%), Gaps = 49/384 (12%)
 Frame = +1

Query: 49   SRTITKLSYQGTREAVLRAKEMVREYEEKGEIQALDYYALEMXXXXXXRHGDPLFGAQVL 228
            SR +++LSYQ   +++ RA+ ++     + ++  LD  +L +      + G  L+   V+
Sbjct: 116  SRLVSQLSYQSKPDSLTRAQSILTRLRNERQLHRLDANSLGLLAMAAAKSGQTLYAVSVI 175

Query: 229  GRMLEMGMAPHVKAWSAVLSRLAKHAAPSSLDISLALFDEFCEAAELGGDHRM----KPD 396
              M+  G  PHVKAW+A ++ L+  A     + S+ LF           D  +    +PD
Sbjct: 176  KSMIRSGYLPHVKAWTAAVANLSS-AGDDGPEESIKLFTAITRRVRRFADQSLVAQSRPD 234

Query: 397  AGAFNAILNGCAIAGRLDTAQRLMSRMDSLGVIPDALTYNILIKLYARLSRKDLLIGVVE 576
              AFNA+LN CA  G  +   +L   M       D LTYN++IKL AR++RK+L++ V+E
Sbjct: 235  TAAFNAVLNACANLGDAEKFSKLFDEMSEWDCESDVLTYNVMIKLCARVNRKELIVFVLE 294

Query: 577  DMLSNGIPPCITTFHSLVAAYVGLGDLDLAKTLVNALRSGRLDICSLMRSASXXXXXXXX 756
             ++  GI  C+TT HSLVAAYVG GDL  A+ +V A+R  R D+C ++R  +        
Sbjct: 295  RIVEKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNIEDLKEKE 354

Query: 757  XXXXXXXRT---------YKPNSQI----------------------------------- 804
                              Y P  ++                                   
Sbjct: 355  EEEAEDDEDAFEDGEDSGYSPRDEVNEEVFEDVFKKLLPNSVTPSDKPPLLPRVFAPDSR 414

Query: 805  -YTTLMKGYMDRGRLDDMMQVLLFMQQDSERDCQPDEVSYTTAISAFVKSGLMEEAHKIA 981
             YTTLMKGYM  GR+ D  ++L  M++  +    PDEV+YTT +SAFVK+GLM+ A ++ 
Sbjct: 415  IYTTLMKGYMKNGRVADTARMLEAMRRQDDSKSHPDEVTYTTVVSAFVKAGLMDRARQVL 474

Query: 982  HEMSSKKVPANLITYNVLLSGYCR 1053
             EM+   VPAN ITYNVLL GYC+
Sbjct: 475  GEMARMGVPANRITYNVLLKGYCK 498