BLASTX nr result

ID: Ephedra26_contig00024064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00024064
         (464 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549378.1| PREDICTED: F-box protein At3g12350-like [Gly...    60   2e-07

>ref|XP_003549378.1| PREDICTED: F-box protein At3g12350-like [Glycine max]
          Length = 444

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 46/134 (34%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
 Frame = -2

Query: 451 LLNVGLVSKAMNAVASSESP-WMNLCYQRWGDVLDVTQL---RRETHSAKSLYSALHRLS 284
           +  +   SK M ++ +++S  W ++C +RWG    +TQ    +  T S K LY+ LHR  
Sbjct: 32  IATLACTSKRMGSLCATDSKLWFSMCERRWGSYTRITQWAQGKNPTLSFKHLYNTLHRWE 91

Query: 283 NLVGLWNAQELYPRGG-----LLYFHWGHLCLVASRVW-SRTDGNVVLRPFFKVPIPFGG 122
           NL+G W       R G     LL+F WG   + ASRV  S +D N V     K P     
Sbjct: 92  NLLGFWR------RSGTGIPSLLFFEWGPSFISASRVSPSASDSNSVTYGVTKTP----- 140

Query: 121 LFKIYFLSEESKVL 80
            F    LSEE  V+
Sbjct: 141 -FLWMSLSEEGHVV 153


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