BLASTX nr result

ID: Ephedra26_contig00024046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00024046
         (506 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                              66   5e-09

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 44/150 (29%), Positives = 85/150 (56%), Gaps = 2/150 (1%)
 Frame = +3

Query: 3   GIGKTTLAAASIQKTSNLIGQNQFKFSRVKVDNSIKQGTEAHIMKLQEIIVENIVGFK-- 176
           G+GKTTLA A      +++   + ++S V++  +I    +  I++LQ++I+ ++   +  
Sbjct: 331 GMGKTTLADAVF----SMVDIKECQYSTVQLFENIDSFPK--IIELQKLILRDLTRSENI 384

Query: 177 VQFSTTDDGRRGLKKIFEEYSCFLFIDNVNEVGDVDNLLPKELCLRPNIKLRIIITSRHR 356
            Q    +DG+R L ++ E+ S F++IDN     ++  LLP++L      K+R++IT+R  
Sbjct: 385 PQIRKHEDGQRELSRVLEDVSAFIYIDNALGERELGQLLPEDLSKAK--KVRLLITARDL 442

Query: 357 NVRLELPRVSTVEEFEMKPLELRESELILR 446
           NVR   P  +  +E+ MK +   E+  +L+
Sbjct: 443 NVRKSCPLKTAPKEYRMKAISSMEATNLLK 472


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