BLASTX nr result

ID: Ephedra26_contig00023946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00023946
         (986 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006431535.1| hypothetical protein CICLE_v10003979mg, part...    52   2e-06

>ref|XP_006431535.1| hypothetical protein CICLE_v10003979mg, partial [Citrus clementina]
           gi|557533657|gb|ESR44775.1| hypothetical protein
           CICLE_v10003979mg, partial [Citrus clementina]
          Length = 314

 Score = 52.0 bits (123), Expect(2) = 2e-06
 Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
 Frame = +2

Query: 101 FGYVGEHNQSGMTQQNLIDEAKLVFFQTQNTTFKHESCWKVLQNSPKWKLSLEKNTKKRP 280
           F  +    QSG+ +Q+ I  AK ++ +   T F  E CW +L++ PKW    +   +K+ 
Sbjct: 119 FSQIENRQQSGVNEQDKIMNAKALYKEMFKTKFTFEHCWNILRHHPKWLTDNQAKREKKK 178

Query: 281 KISLTTLDTCNSAPCSKXXXXXXXXXXXXXXXLLDVDMDVAPTLDKVAERPNGQKSEKGK 460
            IS ++    +S+                    LD + D   T     ERP G+KSEK K
Sbjct: 179 GISASSPGISSSSTAKTPIN-------------LD-ENDNGDTNFVDLERPLGKKSEKRK 224

Query: 461 -RKKNS 475
            R+KNS
Sbjct: 225 IREKNS 230



 Score = 26.9 bits (58), Expect(2) = 2e-06
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 15  KFIPKERTAKALMNRWCNISTSISKFCGLLATL 113
           K    ER  K+LM RW  I  + +KF G  + +
Sbjct: 90  KNFESERDEKSLMQRWSKIQQATNKFHGCFSQI 122


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