BLASTX nr result

ID: Ephedra26_contig00023929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00023929
         (543 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK23690.1| unknown [Picea sitchensis]                              61   1e-07
gb|ABK24844.1| unknown [Picea sitchensis]                              60   3e-07
gb|ABK26475.1| unknown [Picea sitchensis]                              59   6e-07

>gb|ABK23690.1| unknown [Picea sitchensis]
          Length = 242

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
 Frame = -2

Query: 533 GFCYQGKEK--RKSVMLHPLCMTLPQRFHYTRHEAHDVELERCPPELRKDRQKCARCDDI 360
           G+ ++ + +  R  + LHPLCM LP+   Y+RH  H  +L+    +L+     C+ CD  
Sbjct: 117 GYVFETERRHLRPELRLHPLCMALPKILDYSRHADH--KLKFVTGDLKGKAYNCSVCDSQ 174

Query: 359 CV--GWLYVCTEVSCSMKGLCVQCAKLDILGLYRHNV 255
               GW Y C EV+C +  + + CAK+DI GL  H +
Sbjct: 175 IESGGWRYRCEEVACKVY-VDLSCAKIDIFGLSDHGI 210


>gb|ABK24844.1| unknown [Picea sitchensis]
          Length = 236

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
 Frame = -2

Query: 542 VLGGFCYQGKEK--RKSVMLHPLCMTLPQRFHYTRHEAHDVELERCPPELRKDRQKCARC 369
           V+ G+ ++ +    R  + LHPLCM LP+   Y+ H  H ++L R   +L+     C+ C
Sbjct: 110 VVRGYVFETERHHLRHELRLHPLCMALPKILDYSGHANHKLKLVR--GDLKGKEYACSAC 167

Query: 368 DDIC--VGWLYVCTEVSCSMKGLCVQCAKLDILGLYRHNV 255
           D      GW Y C E++C +  + + CAK+DI GL  H +
Sbjct: 168 DTQIDYGGWRYRCEEMACKVY-VDLSCAKIDIFGLSDHGI 206


>gb|ABK26475.1| unknown [Picea sitchensis]
          Length = 244

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
 Frame = -2

Query: 542 VLGGFCYQGKEK--RKSVMLHPLCMTLPQRFHYTRHEAHDVELERCPPELRKDRQKCARC 369
           V+ G+ +Q + +  R  + LHPLCM LP+   Y+ H  H  +L+    +L+     C+ C
Sbjct: 114 VVKGYVFQTERRHLRTELRLHPLCMALPKILDYSGHANH--KLKFVTGDLKGKGYACSAC 171

Query: 368 DD--ICVGWLYVCTEVSCSMKGLCVQCAKLDILGLYRHNV 255
           D      GW Y C +V+C +  + + CAK+DI GL  H +
Sbjct: 172 DSQIDSGGWRYRCEDVACKVY-VDLSCAKIDIFGLSDHGI 210


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