BLASTX nr result
ID: Ephedra26_contig00023872
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00023872
(696 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176388.1| mitochondrial transcription termination factor ... 84 6e-14
gb|ADE76674.1| unknown [Picea sitchensis] 83 7e-14
ref|XP_002888043.1| hypothetical protein ARALYDRAFT_893283 [Arab... 78 3e-12
ref|XP_006301237.1| hypothetical protein CARUB_v10021637mg [Caps... 76 9e-12
ref|XP_006301193.1| hypothetical protein CARUB_v10021598mg [Caps... 76 9e-12
ref|XP_004499419.1| PREDICTED: uncharacterized protein LOC101490... 76 1e-11
emb|CBI37155.3| unnamed protein product [Vitis vinifera] 75 2e-11
ref|XP_002271628.1| PREDICTED: uncharacterized protein LOC100244... 75 2e-11
ref|XP_004513235.1| PREDICTED: uncharacterized protein LOC101504... 75 2e-11
gb|ESW25587.1| hypothetical protein PHAVU_003G048700g [Phaseolus... 74 4e-11
ref|XP_002888395.1| hypothetical protein ARALYDRAFT_894067 [Arab... 74 6e-11
ref|XP_004494724.1| PREDICTED: uncharacterized protein LOC101509... 73 7e-11
ref|XP_006301052.1| hypothetical protein CARUB_v10021445mg [Caps... 73 7e-11
ref|NP_176389.1| mitochondrial transcription termination factor ... 73 7e-11
ref|NP_176402.2| mitochondrial transcription termination factor ... 73 1e-10
ref|XP_006391858.1| hypothetical protein EUTSA_v10023838mg, part... 73 1e-10
ref|XP_002888053.1| hypothetical protein ARALYDRAFT_475137 [Arab... 73 1e-10
ref|NP_974069.1| mitochondrial transcription termination factor ... 72 1e-10
ref|XP_002888056.1| hypothetical protein ARALYDRAFT_893300 [Arab... 72 1e-10
emb|CBI37156.3| unnamed protein product [Vitis vinifera] 72 2e-10
>ref|NP_176388.1| mitochondrial transcription termination factor family protein
[Arabidopsis thaliana] gi|334183576|ref|NP_001185290.1|
Mitochondrial transcription termination factor family
protein [Arabidopsis thaliana] gi|3367527|gb|AAC28512.1|
Strong similarity to gi|2160138 F19K23.6 gene product
from A. thaliana BAC gb|AC000375 [Arabidopsis thaliana]
gi|22655087|gb|AAM98134.1| unknown protein [Arabidopsis
thaliana] gi|30725672|gb|AAP37858.1| At1g61970
[Arabidopsis thaliana] gi|332195787|gb|AEE33908.1|
mitochondrial transcription termination factor family
protein [Arabidopsis thaliana]
gi|332195788|gb|AEE33909.1| mitochondrial transcription
termination factor family protein [Arabidopsis thaliana]
Length = 418
Score = 83.6 bits (205), Expect = 6e-14
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Frame = +3
Query: 39 MSMTVSLDKMDEKLKMLGTLGLSEEEMYEMVRKYPFVLLLSCEEVKKTTEYLMQN-GVPP 215
+S+ VS KM + ++ LG S +E +MV+ +P + LS E VKK TE+L++ P
Sbjct: 283 ISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPL 342
Query: 216 NALVKRPVVMGLSLEKRIKPRLNVYN-IISESSQSKRFPSILTFLCTSEKLFLERYVISH 392
A+V P V G SLEKRI PR NV ++S+ PSI L ++++FL RYV +H
Sbjct: 343 KAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANH 402
Query: 393 PDSQKLFEIL 422
D Q + E++
Sbjct: 403 VDKQLVTELM 412
>gb|ADE76674.1| unknown [Picea sitchensis]
Length = 335
Score = 83.2 bits (204), Expect = 7e-14
Identities = 45/121 (37%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
Frame = +3
Query: 60 DKMDEKLKMLGTLGLSEEEMYEMVRKYPFVLLLSCEEVKKTTEYLMQN-GVPPNALVKRP 236
+++ KLK L + G+ E E+ ++VR+ P +L +S ++++K ++++ G+P L+ P
Sbjct: 203 ERLRNKLKYLASFGIPENEIKDLVRRNPVILNVSMDKMQKNMDFIIHTAGLPAKFLLSCP 262
Query: 237 VVMGLSLEKRIKPRLNVYNIISESSQSKRFPSILTFLCTSEKLFLERYVISHPDSQKLFE 416
++ SLE RIKPR V IS S+R PS+ L SE+ FLE+YV P + KL E
Sbjct: 263 LLPAFSLESRIKPRHKVLMSISALQPSERLPSLTYVLSLSERKFLEKYVNCSPYATKLLE 322
Query: 417 I 419
I
Sbjct: 323 I 323
>ref|XP_002888043.1| hypothetical protein ARALYDRAFT_893283 [Arabidopsis lyrata subsp.
lyrata] gi|297333884|gb|EFH64302.1| hypothetical protein
ARALYDRAFT_893283 [Arabidopsis lyrata subsp. lyrata]
Length = 423
Score = 77.8 bits (190), Expect = 3e-12
Identities = 45/129 (34%), Positives = 71/129 (55%), Gaps = 5/129 (3%)
Frame = +3
Query: 39 MSMTVSLDKMDEKLKMLGTLGLSEEEMYEMVRKYPFVLLLSCEEVKKTTEYLMQN-GVPP 215
+S+T S K+ ++ +LG S ++ MV+++P + LS E VKK TE+L++ P
Sbjct: 277 LSLTHSEKKVANSIETFFSLGFSRDDFVRMVKRFPQCIGLSAELVKKKTEFLVKKMNWPL 336
Query: 216 NALVKRPVVMGLSLEKRIKPRLNVYNIIS----ESSQSKRFPSILTFLCTSEKLFLERYV 383
A+V P V+G SLEKR PR NV + P +++ L ++K FL RYV
Sbjct: 337 KAVVSNPTVLGYSLEKRTVPRCNVIKALMLKGLLGDGGSELPPMMSVLAITDKAFLNRYV 396
Query: 384 ISHPDSQKL 410
+ H D ++L
Sbjct: 397 MKHDDHKQL 405
>ref|XP_006301237.1| hypothetical protein CARUB_v10021637mg [Capsella rubella]
gi|482569947|gb|EOA34135.1| hypothetical protein
CARUB_v10021637mg [Capsella rubella]
Length = 431
Score = 76.3 bits (186), Expect = 9e-12
Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Frame = +3
Query: 96 LGLSEEEMYEMVRKYPFVLLLSCEEVKKTTEYLMQN-GVPPNALVKRPVVMGLSLEKRIK 272
LGL+ +E MV+++P L S E VKK TE+L++ P +V PVV+G SLEKRI
Sbjct: 305 LGLTRDEFTFMVKRFPSCLNFSAESVKKKTEFLVKKMNWPLKTVVLNPVVLGYSLEKRIV 364
Query: 273 PRLNVYNI-ISESSQSKRFPSILTFLCTSEKLFLERYVISHPDSQ 404
PR NV + IS+ + P + + L S++ FL +YV++H D +
Sbjct: 365 PRCNVIRVLISKGFFASEHPPMPSALAISDRAFLNKYVLNHDDKR 409
>ref|XP_006301193.1| hypothetical protein CARUB_v10021598mg [Capsella rubella]
gi|482569903|gb|EOA34091.1| hypothetical protein
CARUB_v10021598mg [Capsella rubella]
Length = 426
Score = 76.3 bits (186), Expect = 9e-12
Identities = 47/112 (41%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
Frame = +3
Query: 96 LGLSEEEMYEMVRKYPFVLLLSCEEVKKTTEYLMQN-GVPPNALVKRPVVMGLSLEKRIK 272
LG S E +V+++P + LS E VKK TE+L++ P ALV P V+G S+EKRI
Sbjct: 310 LGFSRGEFVMLVKRFPQGIGLSAETVKKKTEFLVKKMNWPLKALVSNPAVLGYSMEKRIV 369
Query: 273 PRLNVYN-IISESSQSKRFPSI-LTFLCTSEKLFLERYVISHPDSQKLFEIL 422
PR NV N ++ + PSI F+CT++ +FL RYV H D Q + E++
Sbjct: 370 PRSNVINALMPKGLIGNELPSISYVFICTNQ-VFLNRYVKKHEDKQLVTELM 420
>ref|XP_004499419.1| PREDICTED: uncharacterized protein LOC101490929 isoform X1 [Cicer
arietinum]
Length = 374
Score = 75.9 bits (185), Expect = 1e-11
Identities = 44/147 (29%), Positives = 79/147 (53%), Gaps = 3/147 (2%)
Frame = +3
Query: 6 ENSRTFANILAMSMTVSLDKMDEKLKMLGTLGLSEEEMYEMVRKYPFVLLLSCEEVKKTT 185
ENSR + L +S K+ + G S++E +M +K P +L S +++K
Sbjct: 226 ENSRMLVHGLHTLACLSSKTFRRKMDFIQGFGFSKDECLQMFKKTPTLLRTSEKKLKVGM 285
Query: 186 EYLMQNGV-PPNALVKRPVVMGLSLEKRIKPRLNVYNIISESSQSKRFPSILTFLCTSEK 362
E+ +Q + P +ALV+RPV++ S+E R+ PR V+ ++ + ++ PS + LC SE
Sbjct: 286 EFFLQTVMLPKSALVQRPVILMYSIEDRVFPRYRVFQLLKAQNLCRKVPSFIHVLCLSED 345
Query: 363 LFLERYVISHPDSQK--LFEILGPHNQ 437
+FL++Y+ ++ + L G H Q
Sbjct: 346 MFLDKYISRFKENAEPLLIAYKGEHYQ 372
>emb|CBI37155.3| unnamed protein product [Vitis vinifera]
Length = 885
Score = 75.5 bits (184), Expect = 2e-11
Identities = 40/126 (31%), Positives = 70/126 (55%)
Frame = +3
Query: 21 FANILAMSMTVSLDKMDEKLKMLGTLGLSEEEMYEMVRKYPFVLLLSCEEVKKTTEYLMQ 200
F N L + +S +K+K GLSE+E+ R +P LS +++ T +YL+
Sbjct: 718 FVNALHVICQMSESNWYQKIKTYRRCGLSEDEIMLAFRNHPICFQLSEKKIISTMDYLVN 777
Query: 201 NGVPPNALVKRPVVMGLSLEKRIKPRLNVYNIISESSQSKRFPSILTFLCTSEKLFLERY 380
G PP A+ + PV + +LE+RI PR +V ++ K++ + TFL +E+ FL+R+
Sbjct: 778 MGSPPAAIARAPVALFFNLERRIVPRCSVVKLLLLKGLVKKYLCLGTFLNPTERAFLDRF 837
Query: 381 VISHPD 398
+I + +
Sbjct: 838 IIKYQE 843
Score = 61.6 bits (148), Expect = 2e-07
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Frame = +3
Query: 21 FANILAMSMTVSLDKMDEKLKMLGTLGLSEEEMYEMVRKYPFVLLLSCEEVKKTTEYLMQ 200
F N L + +K++M G SE+E+ R P + LS ++V K ++L+
Sbjct: 264 FVNALQAVCQTTESTWQQKMEMYRRWGWSEDEILSAFRNRPQCMQLSEKKVTKVLDFLVN 323
Query: 201 N-GVPPNALVKRPVVMGLSLEKRIKPRLNVYNIISESSQSKRFPSILTFLCTSEKLFLER 377
G P + + P+ + L+ EKR+ PR +V ++S K+ + TFL E FL++
Sbjct: 324 KMGWRPAVVARAPIAICLNFEKRVAPRCSVVKVLSLKGLIKKDLKLGTFLNLPEGDFLDK 383
Query: 378 YVISHPD 398
YVI + D
Sbjct: 384 YVIKYQD 390
>ref|XP_002271628.1| PREDICTED: uncharacterized protein LOC100244540 [Vitis vinifera]
Length = 401
Score = 75.5 bits (184), Expect = 2e-11
Identities = 40/126 (31%), Positives = 70/126 (55%)
Frame = +3
Query: 21 FANILAMSMTVSLDKMDEKLKMLGTLGLSEEEMYEMVRKYPFVLLLSCEEVKKTTEYLMQ 200
F N L + +S +K+K GLSE+E+ R +P LS +++ T +YL+
Sbjct: 241 FVNALHVICQMSESNWYQKIKTYRRCGLSEDEIMLAFRNHPICFQLSEKKIISTMDYLVN 300
Query: 201 NGVPPNALVKRPVVMGLSLEKRIKPRLNVYNIISESSQSKRFPSILTFLCTSEKLFLERY 380
G PP A+ + PV + +LE+RI PR +V ++ K++ + TFL +E+ FL+R+
Sbjct: 301 MGSPPAAIARAPVALFFNLERRIVPRCSVVKLLLLKGLVKKYLCLGTFLNPTERAFLDRF 360
Query: 381 VISHPD 398
+I + +
Sbjct: 361 IIKYQE 366
>ref|XP_004513235.1| PREDICTED: uncharacterized protein LOC101504025 isoform X1 [Cicer
arietinum]
Length = 374
Score = 75.1 bits (183), Expect = 2e-11
Identities = 43/147 (29%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
Frame = +3
Query: 6 ENSRTFANILAMSMTVSLDKMDEKLKMLGTLGLSEEEMYEMVRKYPFVLLLSCEEVKKTT 185
ENSR + L +S K+ + G S++E +M +K P +L S +++K
Sbjct: 226 ENSRMLVHALHTLSGLSSKTFRRKMDFIQGFGFSKDECMQMFKKTPTLLRTSEKKLKVGM 285
Query: 186 EYLMQNGV-PPNALVKRPVVMGLSLEKRIKPRLNVYNIISESSQSKRFPSILTFLCTSEK 362
E+ +Q + P + LV+RPV++ S+E R+ PR V+ ++ + ++ PS + LC SE
Sbjct: 286 EFFLQTVMLPKSVLVQRPVILMYSIEDRVFPRYRVFQLLKAQNLCRKVPSFIHVLCLSED 345
Query: 363 LFLERYVISHPDSQK--LFEILGPHNQ 437
+FL++Y+ ++ + L G H Q
Sbjct: 346 MFLDKYISRFKENAEPLLIAYKGEHYQ 372
>gb|ESW25587.1| hypothetical protein PHAVU_003G048700g [Phaseolus vulgaris]
Length = 377
Score = 73.9 bits (180), Expect = 4e-11
Identities = 37/127 (29%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Frame = +3
Query: 6 ENSRTFANILAMSMTVSLDKMDEKLKMLGTLGLSEEEMYEMVRKYPFVLLLSCEEVKKTT 185
ENSR F + + +S + KLK++ G S++E +M ++ P + S +++K
Sbjct: 230 ENSRMFVHAIHTLSCLSDKTFERKLKLINCFGFSKDEGLQMFKRTPTLFRTSEKKLKVGM 289
Query: 186 EYLMQNGV-PPNALVKRPVVMGLSLEKRIKPRLNVYNIISESSQSKRFPSILTFLCTSEK 362
E+ + + P + LV P ++ S+E R+ PR V+ ++ + K+ PS + LC SE+
Sbjct: 290 EFFLHTVMLPKSVLVHMPKILMYSMEDRVLPRYKVFQLLKSKNLCKKVPSYIYVLCLSEE 349
Query: 363 LFLERYV 383
+FL++Y+
Sbjct: 350 MFLDKYI 356
>ref|XP_002888395.1| hypothetical protein ARALYDRAFT_894067 [Arabidopsis lyrata subsp.
lyrata] gi|297334236|gb|EFH64654.1| hypothetical protein
ARALYDRAFT_894067 [Arabidopsis lyrata subsp. lyrata]
Length = 387
Score = 73.6 bits (179), Expect = 6e-11
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Frame = +3
Query: 42 SMTVSLDKMDEKLKMLGTLGLSEEEMYEMVRKYPFVLLLSCEEVKKTTEYLMQN-GVPPN 218
S+T S K+ ++ LG S +E MV+++P + S E VKK TEYL++ P
Sbjct: 240 SLTHSEKKVANSIETFLGLGFSRDEFLMMVKRFPQCIGFSTELVKKKTEYLVKEMNWPLK 299
Query: 219 ALVKRPVVMGLSLEKRIKPRLNVYNI-ISESSQSKRFPSILTFLCTSEKLFLERYVISHP 395
A+ P V+G SLEKR PR NV + IS+ P+I + L ++ + FL YV H
Sbjct: 300 AVASIPQVVGYSLEKRTVPRCNVIKVLISKGLLESELPAISSVLTSTSEKFLNCYVRKHD 359
Query: 396 DSQKLFEIL 422
D Q + E++
Sbjct: 360 DKQLVAELM 368
>ref|XP_004494724.1| PREDICTED: uncharacterized protein LOC101509169 isoform X1 [Cicer
arietinum] gi|502113680|ref|XP_004494725.1| PREDICTED:
uncharacterized protein LOC101509169 isoform X2 [Cicer
arietinum] gi|502113684|ref|XP_004494726.1| PREDICTED:
uncharacterized protein LOC101509169 isoform X3 [Cicer
arietinum] gi|502113687|ref|XP_004494727.1| PREDICTED:
uncharacterized protein LOC101509169 isoform X4 [Cicer
arietinum] gi|502113691|ref|XP_004494728.1| PREDICTED:
uncharacterized protein LOC101509169 isoform X5 [Cicer
arietinum]
Length = 374
Score = 73.2 bits (178), Expect = 7e-11
Identities = 38/127 (29%), Positives = 72/127 (56%), Gaps = 1/127 (0%)
Frame = +3
Query: 6 ENSRTFANILAMSMTVSLDKMDEKLKMLGTLGLSEEEMYEMVRKYPFVLLLSCEEVKKTT 185
ENSR + L ++ K+ + G S++E +M +K P +L S +++K
Sbjct: 226 ENSRMLVHALHTLSGLNPKTFRRKMDFIQGFGFSKDECLQMFKKAPALLRTSEKKLKVGM 285
Query: 186 EYLMQNGV-PPNALVKRPVVMGLSLEKRIKPRLNVYNIISESSQSKRFPSILTFLCTSEK 362
E+ ++ + P +ALV+RPV++ S+E R+ PR V+ ++ + ++ PS + LC SE
Sbjct: 286 EFFLKTVMLPKSALVQRPVILMYSIEDRVFPRYRVFQLLKAQNLCRKVPSFIHVLCLSED 345
Query: 363 LFLERYV 383
+FL++Y+
Sbjct: 346 MFLDKYI 352
>ref|XP_006301052.1| hypothetical protein CARUB_v10021445mg [Capsella rubella]
gi|482569762|gb|EOA33950.1| hypothetical protein
CARUB_v10021445mg [Capsella rubella]
Length = 418
Score = 73.2 bits (178), Expect = 7e-11
Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Frame = +3
Query: 39 MSMTVSLDKMDEKLKMLGTLGLSEEEMYEMVRKYPFVLLLSCEEVKKTTEYLMQN-GVPP 215
+++ V+ KM + +K LG S +E MV+ +P + LS E VK+ ++L++
Sbjct: 283 VALRVTEKKMSDSIKTFLGLGFSRDEFAMMVKNFPPCIGLSAEMVKRKADFLVKKMNWTL 342
Query: 216 NALVKRPVVMGLSLEKRIKPRLNVYNI-ISESSQSKRFPSILTFLCTSEKLFLERYVISH 392
ALV P V+G SLEKRI PR NV + IS+ + P + + L + + FL RYV H
Sbjct: 343 KALVSNPSVLGYSLEKRIVPRCNVIKVLISKGLIGSKVPPMSSVLAYTNQEFLRRYVKKH 402
Query: 393 PDSQKLFEIL 422
D Q + +++
Sbjct: 403 EDKQLVDQLM 412
>ref|NP_176389.1| mitochondrial transcription termination factor family protein
[Arabidopsis thaliana] gi|3367528|gb|AAC28513.1| Strong
similarity to gi|2160138 F19K23.6 gene product from A.
thaliana BAC gb|AC000375 [Arabidopsis thaliana]
gi|119935863|gb|ABM06016.1| At1g61980 [Arabidopsis
thaliana] gi|332195789|gb|AEE33910.1| mitochondrial
transcription termination factor family protein
[Arabidopsis thaliana]
Length = 418
Score = 73.2 bits (178), Expect = 7e-11
Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Frame = +3
Query: 45 MTVSLDKMDEKLKMLGTLGLSEEEMYEMVRKYPFVLLLSCEEVKKTTEYLMQN-GVPPNA 221
+T S K+ ++ LG S +E +++++P + LS E VKK TE+L++ P A
Sbjct: 285 LTHSEKKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNWPLKA 344
Query: 222 LVKRPVVMGLSLEKRIKPRLNVYN-IISESSQSKRFPSILTFLCTSEKLFLERYVISHPD 398
LV P V+G SLEKR PR NV +IS+ PSI ++++FL RYV H D
Sbjct: 345 LVSNPAVLGYSLEKRTVPRGNVVQALISKGLIGSELPSISRVFVCTDQVFLNRYVKRHED 404
Query: 399 SQKLFEIL 422
Q E++
Sbjct: 405 KQLETELM 412
>ref|NP_176402.2| mitochondrial transcription termination factor family protein
[Arabidopsis thaliana] gi|26450724|dbj|BAC42471.1|
unknown protein [Arabidopsis thaliana]
gi|28951041|gb|AAO63444.1| At1g62110 [Arabidopsis
thaliana] gi|332195803|gb|AEE33924.1| mitochondrial
transcription termination factor family protein
[Arabidopsis thaliana]
Length = 462
Score = 72.8 bits (177), Expect = 1e-10
Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Frame = +3
Query: 54 SLDKMDEKLKMLGTLGLSEEEMYEMVRKYPFVLLLSCEEVKKTTEYLMQN-GVPPNALVK 230
S K+ +++ LG S +E MV+++P L+LS E VKK E++++ P +V
Sbjct: 325 SEQKILNSIEIFLGLGFSRDEFITMVKRFPQCLILSAETVKKKIEFVVKKMNWPLKDVVS 384
Query: 231 RPVVMGLSLEKRIKPRLNVYNIISE----SSQSKRFPSILTFLCTSEKLFLERYVISHPD 398
P V+G +LEKR PR NV + P + + L +++LFL+RYV +H D
Sbjct: 385 NPTVLGYNLEKRTVPRCNVIEALMSKRLLGDTGSELPPMSSVLVCTDELFLKRYVRNHGD 444
Query: 399 SQKLFEILGPHNQG 440
+ + E++ + +G
Sbjct: 445 KELVLELMTIYTRG 458
>ref|XP_006391858.1| hypothetical protein EUTSA_v10023838mg, partial [Eutrema
salsugineum] gi|557088364|gb|ESQ29144.1| hypothetical
protein EUTSA_v10023838mg, partial [Eutrema salsugineum]
Length = 472
Score = 72.8 bits (177), Expect = 1e-10
Identities = 42/126 (33%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Frame = +3
Query: 51 VSLDKMDEKLKMLGTLGLSEEEMYEMVRKYPFVLLLSCEEVKKTTEYLMQN-GVPPNALV 227
VS +++ + L LG S +E MV ++P L LS E VKK TE+L++ P A+
Sbjct: 331 VSEQRIENFIDTLLGLGFSRDEFVIMVNRFPQGLNLSAENVKKKTEFLVKKMNWPLKAVA 390
Query: 228 KRPVVMGLSLEKRIKPRLNVYN-IISESSQSKRFPSILTFLCTSEKLFLERYVISHPDSQ 404
P ++G S+EKRI PR NV ++S+ P++ L +++ FL +YV H D +
Sbjct: 391 STPAILGYSMEKRIVPRCNVIKALMSKGLIGSELPALSPVLAITDQAFLNKYVKKHDDKE 450
Query: 405 KLFEIL 422
+ +++
Sbjct: 451 LVADLM 456
>ref|XP_002888053.1| hypothetical protein ARALYDRAFT_475137 [Arabidopsis lyrata subsp.
lyrata] gi|297333894|gb|EFH64312.1| hypothetical protein
ARALYDRAFT_475137 [Arabidopsis lyrata subsp. lyrata]
Length = 419
Score = 72.8 bits (177), Expect = 1e-10
Identities = 48/129 (37%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
Frame = +3
Query: 45 MTVSLDKMDEKLKMLGTLGLSEEEMYEMVRKYPFVLLLSCEEVKKTTEYLMQN-GVPPNA 221
+T S K+ ++ LG + +E +V+++P + LS E VKK TE+L++ P A
Sbjct: 286 LTHSEKKILSTIETFLGLGFTRDEFSMLVKRFPQGIGLSPETVKKKTEFLVKKMNWPIKA 345
Query: 222 LVKRPVVMGLSLEKRIKPRLNVYN-IISESSQSKRFPSIL-TFLCTSEKLFLERYVISHP 395
LV P ++G S+EKR PR NV +IS+ PSI F+CT++ +FL RYV H
Sbjct: 346 LVSNPAILGYSMEKRTVPRGNVIKALISKGLIGSELPSISHVFICTNQ-VFLNRYVKKHE 404
Query: 396 DSQKLFEIL 422
D Q + E++
Sbjct: 405 DKQLVTELM 413
>ref|NP_974069.1| mitochondrial transcription termination factor family protein
[Arabidopsis thaliana] gi|2160136|gb|AAB60758.1|
F19K23.4 gene product [Arabidopsis thaliana]
gi|332195802|gb|AEE33923.1| mitochondrial transcription
termination factor family protein [Arabidopsis thaliana]
Length = 461
Score = 72.4 bits (176), Expect = 1e-10
Identities = 44/128 (34%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Frame = +3
Query: 45 MTVSLDKMDEKLKMLGTLGLSEEEMYEMVRKYPFVLLLSCEEVKKTTEYLMQN-GVPPNA 221
+ S K+ ++ LG S +E+ + +++P L+LS E VKK TE+L++ P A
Sbjct: 325 INASEQKIMNSIETFLGLGFSRDEVAMIAKRFPQCLILSAETVKKKTEFLVKKMNWPLKA 384
Query: 222 LVKRPVVMGLSLEKRIKPRLNVYN-IISESSQSKRFPSILTFLCTSEKLFLERYVISHPD 398
+V P V+G SLEKR PR NV ++S+ S P + + L + + FL RYV +H D
Sbjct: 385 VVSTPAVLGYSLEKRTIPRCNVIKALMSKGSLGSELPGMSSVLVCTNEEFLCRYVKNHDD 444
Query: 399 SQKLFEIL 422
+ + E++
Sbjct: 445 KKIVPELM 452
>ref|XP_002888056.1| hypothetical protein ARALYDRAFT_893300 [Arabidopsis lyrata subsp.
lyrata] gi|297333897|gb|EFH64315.1| hypothetical protein
ARALYDRAFT_893300 [Arabidopsis lyrata subsp. lyrata]
Length = 427
Score = 72.4 bits (176), Expect = 1e-10
Identities = 48/133 (36%), Positives = 73/133 (54%), Gaps = 5/133 (3%)
Frame = +3
Query: 39 MSMTVSLDKMDEKLKMLGTLGLSEEEMYEMVRKYPFVLLLSCEEVKKTTEYLMQN-GVPP 215
+S+ S K+ ++ LG S ++ +V+++P + LS E VKK TE++++ P
Sbjct: 287 LSLANSEKKVANSIETFLGLGFSRDDFVRIVKRFPQCIGLSAELVKKKTEFVVKKMNWPL 346
Query: 216 NALVKRPVVMGLSLEKRIKPRLNVYN--IISE--SSQSKRFPSILTFLCTSEKLFLERYV 383
ALV P V+GLS+EKRI PR NV I+ + + P + L T EK FLE YV
Sbjct: 347 KALVSNPQVLGLSMEKRIVPRCNVIKALILKDLLGDTRSKLPPLRYVLITDEK-FLEMYV 405
Query: 384 ISHPDSQKLFEIL 422
H D Q + E++
Sbjct: 406 RKHDDKQLVAELM 418
>emb|CBI37156.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 72.0 bits (175), Expect = 2e-10
Identities = 39/124 (31%), Positives = 67/124 (54%)
Frame = +3
Query: 21 FANILAMSMTVSLDKMDEKLKMLGTLGLSEEEMYEMVRKYPFVLLLSCEEVKKTTEYLMQ 200
F N L M +S +K+K GLSE+E+ R +P LS +++ T +YL+
Sbjct: 218 FVNALQMFFQMSESTWKQKMKAYRRCGLSEDEIMLAFRNHPLCFQLSEKKIMSTVDYLVN 277
Query: 201 NGVPPNALVKRPVVMGLSLEKRIKPRLNVYNIISESSQSKRFPSILTFLCTSEKLFLERY 380
G P A+ + PV + +LE+RI PR +V ++ K+ + TFL +E+ F++R+
Sbjct: 278 MGWQPAAIARVPVALFFNLERRIVPRCSVVKVLLLKGLVKKDLCLGTFLKLTERAFMDRF 337
Query: 381 VISH 392
+I +
Sbjct: 338 IIKY 341