BLASTX nr result

ID: Ephedra26_contig00023805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00023805
         (862 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24692.1| unknown [Picea sitchensis]                              79   3e-12
ref|XP_006849010.1| hypothetical protein AMTR_s00028p00124690 [A...    59   2e-06

>gb|ABK24692.1| unknown [Picea sitchensis]
          Length = 466

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 14/263 (5%)
 Frame = -2

Query: 753 MSSRPSLRYH---PQQAKDSGNVIASCQXXXXXXSDGVFSDMSKQRMPSSSNARRVXXXX 583
           M+S+ S RY    P Q+K   + + +             SD S   + +SS  R      
Sbjct: 1   MASKASSRYQSSTPAQSKVLPSSVMATPFDGRSSVSSHHSDSSSTTISNSSERRGSSVKR 60

Query: 582 XXXXXXXXXXNGKGNLKETALSPRST------QSASAIVDASSK--SKRHNPAXXXXXXX 427
                         ++++   S  S       Q+++ +V  +S   S RH+         
Sbjct: 61  LVSSLSNRYATSSPSIRDKNPSSSSVRKEPNLQTSAIVVTKASDGISSRHSKPKSDHN-- 118

Query: 426 XGMVSLVRRLMDTKRSGNANN--TLFVPANLIANDLKKAPIK-NGVNSKISKFVNKISAP 256
             M +LV++ M  K    A+N  TL +PA++IA D+KKA  K   + S   K + K+S  
Sbjct: 119 --MTTLVKKFMHNKGKPLASNANTLVIPADIIAEDMKKASAKATRITSLQKKLLQKVSGK 176

Query: 255 KNRNHPLPITDGADGKSGGRRRLCQAVEGESDLRKQNEILVAEIQELRSLMSAKDSQVQE 76
            +   P       D KS   R L   ++ E +L ++N     EI+EL   ++ K+++V++
Sbjct: 177 SSETPPSQKKLLTDSKS--TRPLSVVLKSEQELLQKNRGYEMEIEELHKRLANKNAEVED 234

Query: 75  LESSQVMLQQLCSEQRREIRRLK 7
           L S  +ML++LCS+Q+ E++RLK
Sbjct: 235 LRSMGIMLKELCSKQQEEMKRLK 257


>ref|XP_006849010.1| hypothetical protein AMTR_s00028p00124690 [Amborella trichopoda]
           gi|548852483|gb|ERN10591.1| hypothetical protein
           AMTR_s00028p00124690 [Amborella trichopoda]
          Length = 370

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 2/170 (1%)
 Frame = -2

Query: 510 STQSASAIVDASSKSKRHNPAXXXXXXXXGMVSLVRRLMDTKRSGNANNT--LFVPANLI 337
           S++ A++  ++SS++     +           SLV++ M+ K    A +   L +PA+ I
Sbjct: 52  SSRPATSSNNSSSRAITKVKSSDPPKLDQNFTSLVKKFMEKKGKPKALDPAKLAIPADFI 111

Query: 336 ANDLKKAPIKNGVNSKISKFVNKISAPKNRNHPLPITDGADGKSGGRRRLCQAVEGESDL 157
           A+DLKK  +K G N  + +       P +      +TD         R L   +  E +L
Sbjct: 112 ADDLKKN-MKKGSNFSVLQH-KLFPKPSDCKETRKLTD----VKPNTRTLAMVLRSEREL 165

Query: 156 RKQNEILVAEIQELRSLMSAKDSQVQELESSQVMLQQLCSEQRREIRRLK 7
             QN+    EI+EL+ L+S K+ +VQ L+        LC EQR EIR LK
Sbjct: 166 LNQNKEYETEIKELQQLLSQKNREVQNLKD-------LCIEQREEIRALK 208


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