BLASTX nr result
ID: Ephedra26_contig00023750
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00023750
(1219 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY00968.1| Uncharacterized protein TCM_010873 [Theobroma cacao] 79 5e-12
ref|XP_006584302.1| PREDICTED: putative ribonuclease H protein A... 76 2e-11
ref|XP_006596869.1| PREDICTED: putative ribonuclease H protein A... 76 3e-11
ref|XP_006596757.1| PREDICTED: putative ribonuclease H protein A... 76 3e-11
ref|XP_006599859.1| PREDICTED: putative ribonuclease H protein A... 74 2e-10
ref|NP_001173560.1| Os03g0643433 [Oryza sativa Japonica Group] g... 73 2e-10
ref|XP_006599883.1| PREDICTED: putative ribonuclease H protein A... 73 3e-10
gb|EOY07997.1| Uncharacterized protein TCM_022315 [Theobroma cacao] 73 3e-10
ref|XP_006575856.1| PREDICTED: putative ribonuclease H protein A... 72 4e-10
ref|XP_006582707.1| PREDICTED: putative ribonuclease H protein A... 72 5e-10
ref|XP_006577482.1| PREDICTED: putative ribonuclease H protein A... 72 5e-10
ref|XP_006599842.1| PREDICTED: putative ribonuclease H protein A... 72 6e-10
ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A... 72 6e-10
ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A... 72 6e-10
gb|EOY21945.1| Uncharacterized protein TCM_014115 [Theobroma cacao] 72 6e-10
gb|ABF94719.1| retrotransposon protein, putative, unclassified [... 71 8e-10
gb|AAN05341.1| Putative non-LTR retroelement reverse transcripta... 71 8e-10
gb|AAP53939.1| retrotransposon protein, putative, unclassified [... 70 1e-09
emb|CBI18842.3| unnamed protein product [Vitis vinifera] 70 1e-09
ref|XP_006590054.1| PREDICTED: putative ribonuclease H protein A... 70 2e-09
>gb|EOY00968.1| Uncharacterized protein TCM_010873 [Theobroma cacao]
Length = 495
Score = 78.6 bits (192), Expect = 5e-12
Identities = 40/124 (32%), Positives = 65/124 (52%)
Frame = +3
Query: 3 GTYPNINNLWELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAI 182
G N W+L+ KV+ K+A W K L+ + ++K IL+S+ V+Y S
Sbjct: 164 GAKHNSTRFWDLVFEKVRRKLAGWKTKMLSFGGRITLLKSILTSMPVFYMSLFQVPHKVK 223
Query: 183 KKLNGLLCNFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDIELQSRLLVAKSRLQW*M 362
+L L FLW G+ + H V WD C K+C +GI++IE+++R ++ K ++ M
Sbjct: 224 NELKKLQRKFLWGGDDQKRKIHLVKWDKVCNYKDCGGIGITNIEIKNRAMLNKWIWRYGM 283
Query: 363 ERKS 374
E S
Sbjct: 284 ETDS 287
>ref|XP_006584302.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 218
Score = 76.3 bits (186), Expect = 2e-11
Identities = 34/113 (30%), Positives = 59/113 (52%)
Frame = +3
Query: 3 GTYPNINNLWELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAI 182
G P +WE ++ K + K+ KW+ + L+ + ++ +L+++ ++Y SF I
Sbjct: 98 GVNPRRKVVWEPLIRKFEAKLNKWNQRSLSMAGRITLINVVLTTLPLFYMSFFRAPTTII 157
Query: 183 KKLNGLLCNFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDIELQSRLLVAK 341
K+L + FLW G GK V+W+ C KE LG+ DI+ +R L+ K
Sbjct: 158 KRLTAIQRQFLWDGNLEGKNIAWVAWNQVCAPKEKGGLGVKDIKAFNRALLIK 210
>ref|XP_006596869.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 430
Score = 75.9 bits (185), Expect = 3e-11
Identities = 34/113 (30%), Positives = 60/113 (53%)
Frame = +3
Query: 3 GTYPNINNLWELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAI 182
G P +WE ++ K++ K+ KW+ + L+ + ++ +L+++ ++Y SF I
Sbjct: 77 GVNPRRKVVWEPLIKKLEAKLNKWNQRSLSMAGRITLINVVLTTLPLFYMSFFRAPTTII 136
Query: 183 KKLNGLLCNFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDIELQSRLLVAK 341
K+L + FLW G GK V+W+ C KE LG+ DI+ +R L+ K
Sbjct: 137 KRLTAIQRQFLWDGNLEGKKIAWVAWNQVCAPKEKGGLGVKDIKAFNRALLIK 189
>ref|XP_006596757.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 207
Score = 75.9 bits (185), Expect = 3e-11
Identities = 34/113 (30%), Positives = 60/113 (53%)
Frame = +3
Query: 3 GTYPNINNLWELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAI 182
G P +WE ++ K++ K+ KW+ + L+ + ++ +L+++ ++Y SF I
Sbjct: 4 GVNPRRKVVWEPLIRKLEAKLNKWNQRSLSMAGRITLINVVLTALPLFYMSFFRAPTTII 63
Query: 183 KKLNGLLCNFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDIELQSRLLVAK 341
K+L + FLW G GK V+W+ C KE LG+ DI+ +R L+ K
Sbjct: 64 KRLTAIQRQFLWGGNLEGKKIAWVAWNQVCAPKEKGGLGVKDIKAFNRALLIK 116
>ref|XP_006599859.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 490
Score = 73.6 bits (179), Expect = 2e-10
Identities = 39/115 (33%), Positives = 59/115 (51%)
Frame = +3
Query: 3 GTYPNINNLWELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAI 182
G P LW+ I+ K +TK+++W + L+ + ++K L+SI + Y SF +
Sbjct: 160 GANPRRCGLWDPILRKSETKLSRWKQRHLSFGGRVTLIKETLTSIPICYLSFFRIPNRVV 219
Query: 183 KKLNGLLCNFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDIELQSRLLVAKSR 347
+KL + FLW G K V WDT C K+ LGI DI+ +R L+ K R
Sbjct: 220 EKLTQIQRRFLWGGGLDQKKIGWVKWDTICLPKDKGGLGIKDIKTFNRALLGKWR 274
>ref|NP_001173560.1| Os03g0643433 [Oryza sativa Japonica Group]
gi|255674738|dbj|BAH92288.1| Os03g0643433 [Oryza sativa
Japonica Group]
Length = 721
Score = 73.2 bits (178), Expect = 2e-10
Identities = 35/107 (32%), Positives = 58/107 (54%)
Frame = +3
Query: 21 NNLWELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAIKKLNGL 200
N W+ I + Q K++ W K L+ LV++ +LSS+ ++ SF K +KKL+
Sbjct: 518 NKDWQAIEDRFQKKLSSWKGKHLSVGGRLVLINSVLSSLAMFMLSFFEIPKGILKKLDYY 577
Query: 201 LCNFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDIELQSRLLVAK 341
F W+ + + K + W C+ KEC LGI ++E Q+R L++K
Sbjct: 578 RSRFFWQCDENKKKYRLAKWSVLCSPKECGGLGIQNLETQNRCLLSK 624
>ref|XP_006599883.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 563
Score = 72.8 bits (177), Expect = 3e-10
Identities = 31/113 (27%), Positives = 63/113 (55%)
Frame = +3
Query: 3 GTYPNINNLWELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAI 182
G P +W+ ++ K++ K++KW+ + ++ + ++ +L+++ +++ SF A I
Sbjct: 101 GANPRRRVVWDPVIRKIEAKLSKWNQRFISLAGRITLINAVLTALPLFFLSFFRVPSAII 160
Query: 183 KKLNGLLCNFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDIELQSRLLVAK 341
K++ + FLW G+ G+ VSW CC+ K LGI DI+ ++ L+ K
Sbjct: 161 HKISAIQRKFLWGGKQEGRKIAWVSWRQCCSPKHKGGLGIRDIQSLNQALLFK 213
>gb|EOY07997.1| Uncharacterized protein TCM_022315 [Theobroma cacao]
Length = 667
Score = 72.8 bits (177), Expect = 3e-10
Identities = 35/110 (31%), Positives = 59/110 (53%)
Frame = +3
Query: 12 PNINNLWELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAIKKL 191
PN W+ I+ K +T++A W K L+ + +++ +LSS+ ++Y S K IK+L
Sbjct: 210 PNSIQTWKPIIEKFETRLAGWKAKTLSIGGRVALLRSVLSSLPIFYMSIFQIPKRVIKEL 269
Query: 192 NGLLCNFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDIELQSRLLVAK 341
+ FLW G + H + W C KE LGI ++E+++R L+ K
Sbjct: 270 EKIERRFLWCGSEKKQKIHYIEWSKVCNYKENGGLGIINMEVKNRALLNK 319
>ref|XP_006575856.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 289
Score = 72.4 bits (176), Expect = 4e-10
Identities = 33/113 (29%), Positives = 60/113 (53%)
Frame = +3
Query: 3 GTYPNINNLWELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAI 182
G P +WE I+ K + K+ KW+ + ++ + ++ +L+++ ++Y SF I
Sbjct: 102 GVNPRRKVVWEPIIRKFEAKLNKWNQRNVSMAGRITLISSVLTALPLFYMSFFRAPSVVI 161
Query: 183 KKLNGLLCNFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDIELQSRLLVAK 341
+L + +FLW G A GK V+WD C ++ LGI +I+ +R L+ K
Sbjct: 162 NRLTTIQRHFLWGGGAEGKKITWVAWDQVCAPRDKGGLGIKNIKAFNRALLIK 214
>ref|XP_006582707.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 507
Score = 72.0 bits (175), Expect = 5e-10
Identities = 33/116 (28%), Positives = 62/116 (53%)
Frame = +3
Query: 27 LWELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAIKKLNGLLC 206
+WE I+ K++ ++ KW+ + + + ++ +L+++ ++Y SF A I +L +
Sbjct: 231 VWEPIIRKIEARLNKWNQRSILMAGRITLINAVLTTLPLFYLSFFRAPTAVINRLTAIQR 290
Query: 207 NFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDIELQSRLLVAKSRLQW*MERKS 374
FLW G + GK V+W C +E LGI DI++ + L+ K + W M +S
Sbjct: 291 QFLWGGSSEGKKIAWVAWRQVCASREMRGLGIKDIKVLNNTLLVKRK--WLMFHQS 344
>ref|XP_006577482.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 467
Score = 72.0 bits (175), Expect = 5e-10
Identities = 38/115 (33%), Positives = 57/115 (49%)
Frame = +3
Query: 3 GTYPNINNLWELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAI 182
G P LW+ I+ K ++K+ +W + L+ + ++K L+SI ++Y SF
Sbjct: 169 GANPRRYGLWDPILRKTESKLYRWKQRHLSYGGRVTLIKATLTSIPIFYLSFFIIPNRVA 228
Query: 183 KKLNGLLCNFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDIELQSRLLVAKSR 347
+KL + FLW G K V WDT C K+ LGI DI +R L+ K R
Sbjct: 229 EKLTQIQRRFLWGGGLDQKKIAWVKWDTICLPKDKGGLGIKDIRTFNRALLGKWR 283
>ref|XP_006599842.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 297
Score = 71.6 bits (174), Expect = 6e-10
Identities = 33/113 (29%), Positives = 57/113 (50%)
Frame = +3
Query: 3 GTYPNINNLWELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAI 182
G P +WE I+ K + ++ KW + ++ + ++ +L+++ ++Y SF A I
Sbjct: 80 GVNPRRKVVWEPIISKFEARLNKWKQRSISMAGIITLINAVLTALLLFYMSFFRAPLAVI 139
Query: 183 KKLNGLLCNFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDIELQSRLLVAK 341
KL + NFLW G GK V+W C E LG+ DI+ ++ L+ K
Sbjct: 140 NKLTTIQRNFLWGGNQEGKKIAWVAWSQVCAASERGGLGVKDIKAFNKALIIK 192
>ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 450
Score = 71.6 bits (174), Expect = 6e-10
Identities = 35/129 (27%), Positives = 67/129 (51%)
Frame = +3
Query: 27 LWELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAIKKLNGLLC 206
+W ++ K + K+A+W + L++ L ++ +L ++ Y S P K+L+ +
Sbjct: 12 IWNGVIEKCEKKLARWKTQYLSRGGRLTLINSVLDALPTYMLSLFPIPPGITKRLDSIRR 71
Query: 207 NFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDIELQSRLLVAKSRLQW*MERKS*PRQ 386
FLW+G +GFH V W+ T K+ LGI ++EL + L+ K ++ E ++ R+
Sbjct: 72 KFLWQGNKENRGFHLVKWNAVTTGKKNGGLGIKNMELHGKALLMKWLCKYSNENQTLWRR 131
Query: 387 WPGSGWSQQ 413
G+ + Q
Sbjct: 132 VIGAKYENQ 140
>ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 556
Score = 71.6 bits (174), Expect = 6e-10
Identities = 35/129 (27%), Positives = 67/129 (51%)
Frame = +3
Query: 27 LWELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAIKKLNGLLC 206
+W ++ K + K+A+W + L++ L ++ +L ++ Y S P K+L+ +
Sbjct: 118 IWNGVIEKCEKKLARWKTQYLSRGGRLTLINSVLDALPTYMLSLFPIPPGITKRLDSIRR 177
Query: 207 NFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDIELQSRLLVAKSRLQW*MERKS*PRQ 386
FLW+G +GFH V W+ T K+ LGI ++EL + L+ K ++ E ++ R+
Sbjct: 178 KFLWQGNKENRGFHLVKWNAVTTGKKNGGLGIKNMELHGKALLMKWLCKYSNENQTLWRR 237
Query: 387 WPGSGWSQQ 413
G+ + Q
Sbjct: 238 VIGAKYENQ 246
>gb|EOY21945.1| Uncharacterized protein TCM_014115 [Theobroma cacao]
Length = 426
Score = 71.6 bits (174), Expect = 6e-10
Identities = 37/121 (30%), Positives = 62/121 (51%)
Frame = +3
Query: 3 GTYPNINNLWELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAI 182
G N W+ I+ KV+ K+A W K L+ + ++K +L+S+ V++ S
Sbjct: 302 GAKHNSTRFWDPILEKVKRKLAGWKTKMLSFEGRITLLKSVLTSMPVFFMSLFQVPHKVK 361
Query: 183 KKLNGLLCNFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDIELQSRLLVAKSRLQW*M 362
+L L FLW G+ + H V WD C K+C + I+DIE+++ L+ K ++ M
Sbjct: 362 NELEKLQRRFLWGGDDQKRKIHLVKWDKVCNYKDCRGIDITDIEVKNHALLNKWIWRYGM 421
Query: 363 E 365
E
Sbjct: 422 E 422
>gb|ABF94719.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 581
Score = 71.2 bits (173), Expect = 8e-10
Identities = 32/107 (29%), Positives = 58/107 (54%)
Frame = +3
Query: 21 NNLWELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAIKKLNGL 200
N W++I + Q K++ W K L+ LV++ +LSS+ ++ SF K +KKL+
Sbjct: 215 NKDWQIIEERFQRKLSSWKGKCLSVGGRLVLINSVLSSLAMFMLSFFEVPKGILKKLDYY 274
Query: 201 LCNFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDIELQSRLLVAK 341
F W+ + + + W CT K+C LGI ++ +Q++ L++K
Sbjct: 275 RSRFFWQSDGHKRKYRLARWSVICTPKDCGGLGIQNLNVQNKCLLSK 321
>gb|AAN05341.1| Putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 603
Score = 71.2 bits (173), Expect = 8e-10
Identities = 32/107 (29%), Positives = 58/107 (54%)
Frame = +3
Query: 21 NNLWELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAIKKLNGL 200
N W++I + Q K++ W K L+ LV++ +LSS+ ++ SF K +KKL+
Sbjct: 215 NKDWQIIEERFQRKLSSWKGKCLSVGGRLVLINSVLSSLAMFMLSFFEVPKGILKKLDYY 274
Query: 201 LCNFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDIELQSRLLVAK 341
F W+ + + + W CT K+C LGI ++ +Q++ L++K
Sbjct: 275 RSRFFWQSDGHKRKYRLARWSVICTPKDCGGLGIQNLNVQNKCLLSK 321
>gb|AAP53939.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1652
Score = 70.5 bits (171), Expect = 1e-09
Identities = 34/112 (30%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Frame = +3
Query: 9 YPNINNL-WELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAIK 185
+ INN W+ + ++Q K++ W K L+ LV++ +LS++ ++ SF K +K
Sbjct: 1472 HKRINNKDWQGVEERIQKKLSSWKGKFLSVGGRLVLINSVLSNLAIFMLSFFEIPKGILK 1531
Query: 186 KLNGLLCNFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDIELQSRLLVAK 341
KL+ F W+ + K + W C KEC LGI ++E+Q++ L++K
Sbjct: 1532 KLDYYRSRFFWQCDEHKKKYRLARWSVLCKPKECGGLGIQNLEIQNKCLLSK 1583
>emb|CBI18842.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 70.5 bits (171), Expect = 1e-09
Identities = 32/105 (30%), Positives = 60/105 (57%)
Frame = +3
Query: 27 LWELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAIKKLNGLLC 206
+W+ + +++ ++A W + L+K + ++K L+S+ +Y SF K +K+L L
Sbjct: 46 MWDGVEARMRKRLALWKRQYLSKGGRITLIKSTLASLPIYQLSFFRMPKLVVKRLEKLQR 105
Query: 207 NFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDIELQSRLLVAK 341
+FLW G + + H ++W+ CT KE LGI I+L ++ L+ K
Sbjct: 106 DFLWGGGSMERKIHLINWEVVCTQKESGGLGIRKIDLLNKALLGK 150
>ref|XP_006590054.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 246
Score = 70.1 bits (170), Expect = 2e-09
Identities = 33/103 (32%), Positives = 54/103 (52%)
Frame = +3
Query: 3 GTYPNINNLWELIVHKVQTKIAKWSMKRLTKFDNLVIVKYILSSIHVYYSSFLPPSKAAI 182
G P+ +WE ++ K + K++KW+ K L+ D + ++K +L+++ +Y SF + +
Sbjct: 13 GVKPSSWVVWEPLISKFKAKLSKWNHKNLSMGDKVTLIKSVLNALPIYLLSFFKIPQRIV 72
Query: 183 KKLNGLLCNFLWKGEASGKGFHGVSWDTCCTLKECDRLGISDI 311
KL L NF+W G K V WD C K LGI D+
Sbjct: 73 DKLLSLQRNFMWGGNQDHKKIPSVKWDVICLPKNDGGLGIKDL 115