BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00023725
         (699 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT05758.1| hypothetical protein F775_52464 [Aegilops tauschii]     69   1e-09
gb|EMS67719.1| DNA cross-link repair 1A protein [Triticum urartu]      69   1e-09
tpg|DAA58079.1| TPA: putative DNA ligase family protein, partial...    66   1e-08
ref|XP_003567002.1| PREDICTED: uncharacterized protein LOC100835...    66   1e-08
gb|EEC71290.1| hypothetical protein OsI_03304 [Oryza sativa Indi...    65   2e-08
gb|EEE55195.1| hypothetical protein OsJ_03041 [Oryza sativa Japo...    65   3e-08
ref|XP_006646213.1| PREDICTED: DNA ligase 1-like [Oryza brachyan...    62   2e-07
ref|XP_004493055.1| PREDICTED: DNA ligase 1-like, partial [Cicer...    57   4e-06
ref|XP_006357803.1| PREDICTED: DNA ligase 1-like [Solanum tubero...    56   1e-05
ref|XP_003624408.1| DNA ligase [Medicago truncatula] gi|35549942...    56   1e-05

>gb|EMT05758.1| hypothetical protein F775_52464 [Aegilops tauschii]
          Length = 771

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 38/120 (31%), Positives = 69/120 (57%), Gaps = 2/120 (1%)
 Frame = +1

Query: 175 RTKNNQEDKPQSASKRKKRKQGAVTTSPG--KQSSITSFFTKAGVRAEDQATSSEERKIV 348
           +TK  ++    + +K KK+ +   +T  G  KQ +IT++F +A   A    ++++     
Sbjct: 581 QTKKERKRGSSTVNKSKKKGKSTASTEAGGRKQPTITNYFGRAPAAASKSESANKVTVDP 640

Query: 349 HETNADSSSSKTENAKFRDHSKGLDQLLQILGTDLSEAQALVLLEKAKGDVSRAVEFYYS 528
           H+ N ++++   +  +   H +G+DQLLQI+   +S   A+ LLEK KGDV+ AV+ +YS
Sbjct: 641 HQNNGENNNQSMDIVE--SHKQGVDQLLQIVDGSMSRESAISLLEKTKGDVNVAVDMFYS 698


>gb|EMS67719.1| DNA cross-link repair 1A protein [Triticum urartu]
          Length = 681

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
 Frame = +1

Query: 91  DMSNGLQKRDIGKLCQDS--FGNDDCDILERTKNNQEDKPQSASKRKKRKQGAVTTSPG- 261
           D   GL     G + Q +  F   + D  E    +  +KP+S   R      +  T  G 
Sbjct: 403 DQIQGLLMSSGGDVVQSASAFFERERDFFEEANGSNNEKPKSVEIRTSDLGSSADTKAGG 462

Query: 262 -KQSSITSFFTKAGVRAEDQATSSEERKIVHETNADSSSSKTENAKFRDHSKGLDQLLQI 438
            KQ +IT++F +A   A    ++++     H+ N ++++   +  +   H +G++QLLQI
Sbjct: 463 PKQPTITNYFGRATAAASKSESANKVTVDPHQNNGENNNQSMDIVE--SHKQGVNQLLQI 520

Query: 439 LGTDLSEAQALVLLEKAKGDVSRAVEFYYS 528
           +   +S   A+ LLEK KGDV+ AV+ +YS
Sbjct: 521 VDGSMSRESAISLLEKTKGDVNVAVDMFYS 550


>tpg|DAA58079.1| TPA: putative DNA ligase family protein, partial [Zea mays]
          Length = 885

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 4/117 (3%)
 Frame = +1

Query: 196 DKPQSASKRKKRKQGAVTTSPG----KQSSITSFFTKAGVRAEDQATSSEERKIVHETNA 363
           +K  S++  K +K+G +T+S      KQS+IT++F +A   A  +          H+ N 
Sbjct: 573 NKRGSSNTNKPKKKGRLTSSTESGGRKQSTITNYFIRATEAAFKRCRPERVTVEAHQNNV 632

Query: 364 DSSSSKTENAKFRDHSKGLDQLLQILGTDLSEAQALVLLEKAKGDVSRAVEFYYSST 534
           ++S    +  K +D    +DQLLQI+   +S   A+ LLEKA GDV+ AV+ +YSS+
Sbjct: 633 ENSDQLADTEKTQDQI--VDQLLQIVDGSMSREYAVYLLEKANGDVAVAVDIFYSSS 687


>ref|XP_003567002.1| PREDICTED: uncharacterized protein LOC100835014 [Brachypodium
           distachyon]
          Length = 1365

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
 Frame = +1

Query: 181 KNNQEDKPQSASKRKKRKQGAVTTSPG--KQSSITSFFTKAGVRAEDQATSSEERKIVHE 354
           K  ++    +A+K KK+ + A +T  G  KQ +IT++F +A   A    T+++     +E
Sbjct: 567 KKERKRVSSTANKSKKKGRSAASTESGGRKQPTITNYFGRAMAAASKSETANKVTVDPYE 626

Query: 355 TNADSSSSKTENAKFRDHSKGLDQLLQILGTDLSEAQALVLLEKAKGDVSRAVEFYYS 528
              +  +        + H +G++QLLQI+   +S   A+ LLEK KGDV+ AV+ +YS
Sbjct: 627 NIGEKENDTQLTDIVKTHEQGINQLLQIVDGSMSRESAISLLEKTKGDVNVAVDMFYS 684


>gb|EEC71290.1| hypothetical protein OsI_03304 [Oryza sativa Indica Group]
          Length = 1226

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
 Frame = +1

Query: 61  TSSINSISVLDMSNGLQKRDIGKLCQDSFGNDDCDILERTKNNQEDKPQSASKRKKRKQG 240
           +S + +++ + M + L KR+                  +  +N  DKP+   +    K  
Sbjct: 393 SSKLLNLNAMRMKSNLSKRE-----------------RKRGSNSADKPKKKGRSTSFKP- 434

Query: 241 AVTTSPG-KQSSITSFFTKAGVRAEDQATSSEERKIVHETNADSSSSKTENAKFRDHSKG 417
            +T S G KQS+IT++F +  + A    TS +     ++ N  +    TE  +    S  
Sbjct: 435 -LTESSGRKQSTITNYFARTMLAASKSDTSDKVTVDANQNNVRNDDQFTEVVESEKQS-- 491

Query: 418 LDQLLQILGTDLSEAQALVLLEKAKGDVSRAVEFYYSSTPKSSEL 552
           + QLLQI+   +S   A+ LLEKAKGDV+ AV+ +YS T  S+ L
Sbjct: 492 VSQLLQIVDGGMSRESAISLLEKAKGDVNVAVDIFYSKTDNSNVL 536


>gb|EEE55195.1| hypothetical protein OsJ_03041 [Oryza sativa Japonica Group]
          Length = 1455

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
 Frame = +1

Query: 61  TSSINSISVLDMSNGLQKRDIGKLCQDSFGNDDCDILERTKNNQEDKPQSASKRKKRKQG 240
           +S + +++ + M + L KR+                  +  +N  DKP+   +    K  
Sbjct: 555 SSKLLNLNAMRMKSNLSKRE-----------------RKRGSNSADKPKKKGRSTAFKP- 596

Query: 241 AVTTSPG-KQSSITSFFTKAGVRAEDQATSSEERKIVHETNADSSSSKTENAKFRDHSKG 417
            +T S G KQS+IT++F +  + A    TS +     ++ N  +    TE  +    S  
Sbjct: 597 -LTESSGRKQSTITNYFARTMLAASKSDTSDKVTVDANQNNVRNDDQFTEVVESEKQS-- 653

Query: 418 LDQLLQILGTDLSEAQALVLLEKAKGDVSRAVEFYYSSTPKSSEL 552
           + QLLQI+   +S   A+ LLEKAKGDV+ AV+ +YS T  S+ L
Sbjct: 654 VSQLLQIVDGGMSRESAISLLEKAKGDVNVAVDIFYSKTDNSNVL 698


>ref|XP_006646213.1| PREDICTED: DNA ligase 1-like [Oryza brachyantha]
          Length = 1397

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 40/120 (33%), Positives = 62/120 (51%)
 Frame = +1

Query: 184 NNQEDKPQSASKRKKRKQGAVTTSPGKQSSITSFFTKAGVRAEDQATSSEERKIVHETNA 363
           +N  DKP+   +    K  +  +S  KQS+IT++F +    A     S E     +++N 
Sbjct: 571 SNSADKPKKKGRSIASKP-STESSGRKQSTITNYFVRTITTASKSDMSDEVTVDANQSNV 629

Query: 364 DSSSSKTENAKFRDHSKGLDQLLQILGTDLSEAQALVLLEKAKGDVSRAVEFYYSSTPKS 543
            +    T+  +    S  + QLLQI+   +S   A+ LLEKAKGDV+ AV+ +YS T  S
Sbjct: 630 KNGDQFTDLVESEKQS--VSQLLQIIDGGISRESAISLLEKAKGDVNVAVDIFYSKTDSS 687


>ref|XP_004493055.1| PREDICTED: DNA ligase 1-like, partial [Cicer arietinum]
          Length = 1363

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
 Frame = +1

Query: 175 RTKNNQEDKPQSASKRKKRKQGAVTTSPGKQSSITSFFTKAGVRAEDQATSSEERKIVHE 354
           + K   E KP      K + +    +S  KQS+IT FF+KA  +      S +      E
Sbjct: 547 KRKRRSESKPNKKVNVKAKSE----SSGSKQSTITKFFSKAMPKNPSDTQSDQFGSKPDE 602

Query: 355 TNADSSSSKTENAKFRDHSKGLDQLLQIL-GTDLSEAQALVLLEKAKGDVSRAVEFYYSS 531
           ++       TE      H   +DQ +QI+ G +  + QA+ ++EKAKGD+ +A++ YY +
Sbjct: 603 SSKVEELLPTEAGNLYKHE--IDQFIQIINGNESLKTQAITIIEKAKGDIDKALDIYYCN 660

Query: 532 T 534
           +
Sbjct: 661 S 661


>ref|XP_006357803.1| PREDICTED: DNA ligase 1-like [Solanum tuberosum]
          Length = 1441

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 51/197 (25%), Positives = 80/197 (40%), Gaps = 6/197 (3%)
 Frame = +1

Query: 49   KPAKTSSINSISVLDMSNGLQKRDIGKLCQDSFGNDDCDILERTKNNQEDKPQSASKRKK 228
            K  K   ++S S   +S G +KR  G     S         +R+  N+       S  K 
Sbjct: 582  KTVKLPIMDSSSSKKVSPGKRKRSTGNKSSSSSKKVSPGNRKRSTGNK-------SFEKA 634

Query: 229  RKQGAVTTSPGKQSSITSFFTKAGVRAEDQATSSEERKIVHETNADSSSSKTENAKFRDH 408
            +   ++ +   KQ +IT FF+K    +     S  + K  H+ N         NA    +
Sbjct: 635  KGHASMDSGGPKQCTITKFFSKTLPLSLQNGNSKADSKNFHDDNC-----MPPNASIEAY 689

Query: 409  SKGLDQLLQIL-GTDLSEAQALVLLEKAKGDVSRAVEFYYSSTPKSSELTGRDICCSN-- 579
             +  D+ +QI+ G D   + A  +L K KGD+S A++ Y+S      E  G  I  +N  
Sbjct: 690  KEEADRFIQIMNGDDSLRSYATTVLAKTKGDISMALDIYFSEYKDVGETNGDGISKTNKL 749

Query: 580  ---PCMPDVRPLIYDGK 621
                C  +V P   D K
Sbjct: 750  LQPQCAKEVYPSSKDDK 766


>ref|XP_003624408.1| DNA ligase [Medicago truncatula] gi|355499423|gb|AES80626.1| DNA
            ligase [Medicago truncatula]
          Length = 1498

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 9/206 (4%)
 Frame = +1

Query: 16   NMTSASEDMDDKPAKTSSINSISVLDMSNGLQKRDIGKLCQDSFGNDDCDILERTKNNQE 195
            N+ S S + D  P   S++N+ +     +  +K D+ +  +    N    +  +   ++ 
Sbjct: 542  NLKSFSSN-DASPFSKSNLNNTN-----STTKKLDLFRSQESKLTNLRKALSNQISPSKR 595

Query: 196  DKPQSASKRKKRKQGAVTTSPG-KQSSITSFFTKA-----GVRAEDQATSS--EERKIVH 351
             K   +   KK K  A + S G KQ++IT FF KA     G    DQ  S   E  ++  
Sbjct: 596  KKGSESKSNKKVKVKAKSESSGSKQATITKFFGKAMPVMPGDTQSDQFGSKPGESPEVEE 655

Query: 352  ETNADSSSSKTENAKFRDHSKGLDQLLQILGTDLS-EAQALVLLEKAKGDVSRAVEFYYS 528
                D+ +          + + +DQ +QI+  D S + QA+ ++E+AKGD+++A++ YYS
Sbjct: 656  LVPTDAGNM---------YKQEIDQFMQIINGDESLKKQAITIIEEAKGDINKALDIYYS 706

Query: 529  STPKSSELTGRDICCSNPCMPDVRPL 606
            +   S  L  R+I     C  D RPL
Sbjct: 707  N---SCNLGEREISVQGECKVD-RPL 728