BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00023643
         (650 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619...   114   3e-23
ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citr...   114   3e-23
emb|CBI31423.3| unnamed protein product [Vitis vinifera]              111   2e-22
ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine...   111   2e-22
ref|XP_006848911.1| hypothetical protein AMTR_s00161p00064200 [A...   110   5e-22
gb|EOY18776.1| Pseudouridine synthase family protein isoform 4 [...   109   6e-22
gb|EOY18775.1| Pseudouridine synthase family protein isoform 3 [...   109   6e-22
gb|EOY18774.1| Pseudouridine synthase family protein isoform 2, ...   109   6e-22
ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, part...   109   8e-22
ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsi...   109   8e-22
ref|XP_002879786.1| pseudouridine synthase family protein [Arabi...   109   8e-22
gb|AAC28992.1| unknown protein [Arabidopsis thaliana]                 109   8e-22
ref|XP_002988319.1| hypothetical protein SELMODRAFT_45172 [Selag...   108   1e-21
ref|XP_002991422.1| hypothetical protein SELMODRAFT_45109 [Selag...   108   1e-21
ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine...   107   2e-21
ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601...   107   3e-21
ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine...   107   3e-21
ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine...   107   4e-21
gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabi...   106   5e-21
ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Popu...   105   2e-20

>ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619728 [Citrus sinensis]
          Length = 401

 Score =  114 bits (284), Expect = 3e-23
 Identities = 57/74 (77%), Positives = 65/74 (87%), Gaps = 1/74 (1%)
 Frame = +1

Query: 430 AARRFFNDNFRE-PERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKD 606
           AARRF+NDNFR+ PERLSKVLAAAGVASRR SEE+IF G+V+VNG  CNTPQTRVDP +D
Sbjct: 137 AARRFYNDNFRDTPERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTPQTRVDPARD 196

Query: 607 SINIDGKPLPKKLP 648
            I ++GK LPKKLP
Sbjct: 197 IIYVNGKRLPKKLP 210


>ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citrus clementina]
           gi|557538690|gb|ESR49734.1| hypothetical protein
           CICLE_v10031516mg [Citrus clementina]
          Length = 451

 Score =  114 bits (284), Expect = 3e-23
 Identities = 57/74 (77%), Positives = 65/74 (87%), Gaps = 1/74 (1%)
 Frame = +1

Query: 430 AARRFFNDNFRE-PERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKD 606
           AARRF+NDNFR+ PERLSKVLAAAGVASRR SEE+IF G+V+VNG  CNTPQTRVDP +D
Sbjct: 187 AARRFYNDNFRDTPERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTPQTRVDPARD 246

Query: 607 SINIDGKPLPKKLP 648
            I ++GK LPKKLP
Sbjct: 247 IIYVNGKRLPKKLP 260


>emb|CBI31423.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  111 bits (277), Expect = 2e-22
 Identities = 55/74 (74%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
 Frame = +1

Query: 430 AARRFFNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKD 606
           AARRF+N+NFR+P +RLSKVLAAAGVASRR SEE+IF GRV+VNG  CNTPQTRVDP +D
Sbjct: 32  AARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQTRVDPARD 91

Query: 607 SINIDGKPLPKKLP 648
            I ++G  LPKKLP
Sbjct: 92  MIYVNGNRLPKKLP 105


>ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464
           isoform 1 [Vitis vinifera]
          Length = 393

 Score =  111 bits (277), Expect = 2e-22
 Identities = 55/74 (74%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
 Frame = +1

Query: 430 AARRFFNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKD 606
           AARRF+N+NFR+P +RLSKVLAAAGVASRR SEE+IF GRV+VNG  CNTPQTRVDP +D
Sbjct: 129 AARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQTRVDPARD 188

Query: 607 SINIDGKPLPKKLP 648
            I ++G  LPKKLP
Sbjct: 189 MIYVNGNRLPKKLP 202


>ref|XP_006848911.1| hypothetical protein AMTR_s00161p00064200 [Amborella trichopoda]
           gi|548852364|gb|ERN10492.1| hypothetical protein
           AMTR_s00161p00064200 [Amborella trichopoda]
          Length = 403

 Score =  110 bits (274), Expect = 5e-22
 Identities = 53/73 (72%), Positives = 61/73 (83%)
 Frame = +1

Query: 430 AARRFFNDNFREPERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKDS 609
           AARRF+N NFREP+RLSKVLA+AGVASRR SEE+IF G+V+VNG  CN PQTRVDP KD 
Sbjct: 154 AARRFYNQNFREPQRLSKVLASAGVASRRSSEELIFDGKVTVNGSVCNVPQTRVDPIKDV 213

Query: 610 INIDGKPLPKKLP 648
           I ++G  L KKLP
Sbjct: 214 IYVNGSRLAKKLP 226


>gb|EOY18776.1| Pseudouridine synthase family protein isoform 4 [Theobroma cacao]
          Length = 350

 Score =  109 bits (273), Expect = 6e-22
 Identities = 55/74 (74%), Positives = 63/74 (85%), Gaps = 1/74 (1%)
 Frame = +1

Query: 430 AARRFFNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKD 606
           AARRF+N+NF EP +RLSKVLAAAGVASRRGSEE+IF G+V+VNG  CN PQTRVDP KD
Sbjct: 183 AARRFYNENFTEPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQTRVDPAKD 242

Query: 607 SINIDGKPLPKKLP 648
            I ++G  LPKKLP
Sbjct: 243 IIYVNGSRLPKKLP 256


>gb|EOY18775.1| Pseudouridine synthase family protein isoform 3 [Theobroma cacao]
          Length = 374

 Score =  109 bits (273), Expect = 6e-22
 Identities = 55/74 (74%), Positives = 63/74 (85%), Gaps = 1/74 (1%)
 Frame = +1

Query: 430 AARRFFNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKD 606
           AARRF+N+NF EP +RLSKVLAAAGVASRRGSEE+IF G+V+VNG  CN PQTRVDP KD
Sbjct: 183 AARRFYNENFTEPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQTRVDPAKD 242

Query: 607 SINIDGKPLPKKLP 648
            I ++G  LPKKLP
Sbjct: 243 IIYVNGSRLPKKLP 256


>gb|EOY18774.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma
           cacao]
          Length = 398

 Score =  109 bits (273), Expect = 6e-22
 Identities = 55/74 (74%), Positives = 63/74 (85%), Gaps = 1/74 (1%)
 Frame = +1

Query: 430 AARRFFNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKD 606
           AARRF+N+NF EP +RLSKVLAAAGVASRRGSEE+IF G+V+VNG  CN PQTRVDP KD
Sbjct: 134 AARRFYNENFTEPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQTRVDPAKD 193

Query: 607 SINIDGKPLPKKLP 648
            I ++G  LPKKLP
Sbjct: 194 IIYVNGSRLPKKLP 207


>ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, partial [Capsella rubella]
           gi|482562896|gb|EOA27086.1| hypothetical protein
           CARUB_v10023183mg, partial [Capsella rubella]
          Length = 456

 Score =  109 bits (272), Expect = 8e-22
 Identities = 53/74 (71%), Positives = 65/74 (87%), Gaps = 1/74 (1%)
 Frame = +1

Query: 430 AARRFFNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKD 606
           AARRF+N+NF+EP +RLSKVLAAAGVASRR SEE+IF G+V+VNG+ CNTPQTRVDP +D
Sbjct: 192 AARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNTPQTRVDPSRD 251

Query: 607 SINIDGKPLPKKLP 648
            I ++G  +PKKLP
Sbjct: 252 IIYVNGNRIPKKLP 265


>ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsis thaliana]
           gi|21617894|gb|AAM66944.1| unknown [Arabidopsis
           thaliana] gi|26450440|dbj|BAC42334.1| unknown protein
           [Arabidopsis thaliana] gi|330254545|gb|AEC09639.1|
           pseudouridine synthase family protein [Arabidopsis
           thaliana]
          Length = 410

 Score =  109 bits (272), Expect = 8e-22
 Identities = 53/74 (71%), Positives = 65/74 (87%), Gaps = 1/74 (1%)
 Frame = +1

Query: 430 AARRFFNDNFRE-PERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKD 606
           AARRF+N+NF+E P+RLSKVLAAAGVASRR SEE+IF G+V+VNG+ CNTPQTRVDP +D
Sbjct: 146 AARRFYNENFKEQPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNTPQTRVDPSRD 205

Query: 607 SINIDGKPLPKKLP 648
            I ++G  +PKKLP
Sbjct: 206 IIYVNGNRIPKKLP 219


>ref|XP_002879786.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297325625|gb|EFH56045.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 412

 Score =  109 bits (272), Expect = 8e-22
 Identities = 53/74 (71%), Positives = 65/74 (87%), Gaps = 1/74 (1%)
 Frame = +1

Query: 430 AARRFFNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKD 606
           AARRF+N+NF+EP +RLSKVLAAAGVASRR SEE+IF G+V+VNG+ CNTPQTRVDP +D
Sbjct: 148 AARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNTPQTRVDPSRD 207

Query: 607 SINIDGKPLPKKLP 648
            I ++G  +PKKLP
Sbjct: 208 IIYVNGNRIPKKLP 221


>gb|AAC28992.1| unknown protein [Arabidopsis thaliana]
          Length = 303

 Score =  109 bits (272), Expect = 8e-22
 Identities = 53/74 (71%), Positives = 65/74 (87%), Gaps = 1/74 (1%)
 Frame = +1

Query: 430 AARRFFNDNFRE-PERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKD 606
           AARRF+N+NF+E P+RLSKVLAAAGVASRR SEE+IF G+V+VNG+ CNTPQTRVDP +D
Sbjct: 146 AARRFYNENFKEQPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNTPQTRVDPSRD 205

Query: 607 SINIDGKPLPKKLP 648
            I ++G  +PKKLP
Sbjct: 206 IIYVNGNRIPKKLP 219


>ref|XP_002988319.1| hypothetical protein SELMODRAFT_45172 [Selaginella moellendorffii]
           gi|300144051|gb|EFJ10738.1| hypothetical protein
           SELMODRAFT_45172 [Selaginella moellendorffii]
          Length = 251

 Score =  108 bits (271), Expect = 1e-21
 Identities = 52/73 (71%), Positives = 60/73 (82%)
 Frame = +1

Query: 430 AARRFFNDNFREPERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKDS 609
           AARRFFN  FR+ ERLSKV+AAAGVASRR  EE+IFAG+V VNG  C TP+T VDP KD 
Sbjct: 7   AARRFFNMRFRKAERLSKVMAAAGVASRRACEEIIFAGKVVVNGKVCRTPETHVDPLKDL 66

Query: 610 INIDGKPLPKKLP 648
           I IDGKP+P++LP
Sbjct: 67  IYIDGKPIPRRLP 79


>ref|XP_002991422.1| hypothetical protein SELMODRAFT_45109 [Selaginella moellendorffii]
           gi|300140815|gb|EFJ07534.1| hypothetical protein
           SELMODRAFT_45109 [Selaginella moellendorffii]
          Length = 251

 Score =  108 bits (271), Expect = 1e-21
 Identities = 52/73 (71%), Positives = 60/73 (82%)
 Frame = +1

Query: 430 AARRFFNDNFREPERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKDS 609
           AARRFFN  FR+ ERLSKV+AAAGVASRR  EE+IFAG+V VNG  C TP+T VDP KD 
Sbjct: 7   AARRFFNMRFRKAERLSKVMAAAGVASRRACEEIIFAGKVVVNGKVCRTPETHVDPLKDL 66

Query: 610 INIDGKPLPKKLP 648
           I IDGKP+P++LP
Sbjct: 67  IYIDGKPIPRRLP 79


>ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
           [Fragaria vesca subsp. vesca]
          Length = 397

 Score =  107 bits (268), Expect = 2e-21
 Identities = 52/73 (71%), Positives = 62/73 (84%)
 Frame = +1

Query: 430 AARRFFNDNFREPERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKDS 609
           AARRF+N+NFRE +RLSKVLAAAGVASRR SE++IF G+V+VNG  CNTPQT VDP +D 
Sbjct: 127 AARRFYNENFRESQRLSKVLAAAGVASRRSSEQLIFDGKVTVNGSVCNTPQTPVDPGRDI 186

Query: 610 INIDGKPLPKKLP 648
           I ++G  LPKKLP
Sbjct: 187 IYVNGNRLPKKLP 199


>ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601559 [Solanum tuberosum]
          Length = 413

 Score =  107 bits (267), Expect = 3e-21
 Identities = 53/74 (71%), Positives = 63/74 (85%), Gaps = 1/74 (1%)
 Frame = +1

Query: 430 AARRFFNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKD 606
           AARRF+N+NFR+P +RLSKVLAAAGVASRR SEE+IF GRV+VNG  C TPQT+VDP +D
Sbjct: 149 AARRFYNENFRDPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCKTPQTKVDPARD 208

Query: 607 SINIDGKPLPKKLP 648
            I ++G  LPKKLP
Sbjct: 209 VIYVNGNRLPKKLP 222


>ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
           [Solanum lycopersicum]
          Length = 414

 Score =  107 bits (267), Expect = 3e-21
 Identities = 53/74 (71%), Positives = 63/74 (85%), Gaps = 1/74 (1%)
 Frame = +1

Query: 430 AARRFFNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKD 606
           AARRF+N+NFR+P +RLSKVLAAAGVASRR SEE+IF GRV+VNG  C TPQT+VDP +D
Sbjct: 150 AARRFYNENFRDPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCKTPQTKVDPARD 209

Query: 607 SINIDGKPLPKKLP 648
            I ++G  LPKKLP
Sbjct: 210 VIYVNGNRLPKKLP 223


>ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
           [Cucumis sativus] gi|449490423|ref|XP_004158601.1|
           PREDICTED: uncharacterized RNA pseudouridine synthase
           aq_1464-like [Cucumis sativus]
          Length = 398

 Score =  107 bits (266), Expect = 4e-21
 Identities = 54/74 (72%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
 Frame = +1

Query: 430 AARRFFNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKD 606
           AARRF+N+N RE  +RLSKVLAAAGVASRR SEE+IF GRV+VNG  CNTPQTRVDP +D
Sbjct: 134 AARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARD 193

Query: 607 SINIDGKPLPKKLP 648
            I ++G  LPKKLP
Sbjct: 194 IIYVNGNRLPKKLP 207


>gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabilis]
          Length = 404

 Score =  106 bits (265), Expect = 5e-21
 Identities = 54/74 (72%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
 Frame = +1

Query: 430 AARRFFNDNFREPE-RLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKD 606
           AARRF+N+NFRE + RLSKVLAAAGVASRR SEE+I  GRV+VNG  CNTPQTRVDP KD
Sbjct: 142 AARRFYNENFRESDQRLSKVLAAAGVASRRNSEELILEGRVTVNGSVCNTPQTRVDPAKD 201

Query: 607 SINIDGKPLPKKLP 648
            I ++G  LPK+LP
Sbjct: 202 VIYVNGNRLPKRLP 215


>ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Populus trichocarpa]
           gi|550332354|gb|EEE89362.2| hypothetical protein
           POPTR_0008s03540g [Populus trichocarpa]
          Length = 397

 Score =  105 bits (261), Expect = 2e-20
 Identities = 52/74 (70%), Positives = 63/74 (85%), Gaps = 1/74 (1%)
 Frame = +1

Query: 430 AARRFFNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPFKD 606
           AARRF+N+NFR+  +RLSKVLAAAGVASRR SE +IF G+V+VNG  CNTPQTRVDP +D
Sbjct: 133 AARRFYNENFRDQAQRLSKVLAAAGVASRRSSEALIFEGKVTVNGSVCNTPQTRVDPGRD 192

Query: 607 SINIDGKPLPKKLP 648
           +I ++G  LPKKLP
Sbjct: 193 AIYVNGNRLPKKLP 206