BLASTX nr result
ID: Ephedra26_contig00023611
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00023611
(430 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_005077551.1| PREDICTED: nocturnin [Mesocricetus auratus] 62 8e-08
ref|XP_001346851.1| hypothetical protein [Paramecium tetraurelia... 60 2e-07
ref|XP_004303362.1| PREDICTED: carbon catabolite repressor prote... 60 3e-07
ref|XP_001768291.1| predicted protein [Physcomitrella patens] gi... 60 3e-07
gb|EOY09579.1| DNAse I-like superfamily protein isoform 1 [Theob... 60 4e-07
gb|EMJ05152.1| hypothetical protein PRUPE_ppa022652mg [Prunus pe... 60 4e-07
ref|XP_001782595.1| predicted protein [Physcomitrella patens] gi... 59 5e-07
ref|XP_006232386.1| PREDICTED: nocturnin isoform X1 [Rattus norv... 59 7e-07
ref|NP_612535.1| nocturnin [Rattus norvegicus] gi|565683206|sp|Q... 59 7e-07
gb|AGZ15277.1| putative carbon catabolite repressor protein 4-li... 59 9e-07
ref|XP_002531170.1| carbon catabolite repressor protein, putativ... 58 1e-06
ref|NP_033964.1| nocturnin [Mus musculus] gi|17380366|sp|O35710.... 58 1e-06
ref|XP_006501019.1| PREDICTED: nocturnin isoform X1 [Mus musculus] 58 1e-06
ref|XP_006501020.1| PREDICTED: nocturnin isoform X2 [Mus musculus] 58 1e-06
ref|XP_006363873.1| PREDICTED: carbon catabolite repressor prote... 58 1e-06
ref|XP_006363872.1| PREDICTED: carbon catabolite repressor prote... 58 1e-06
gb|ERE88978.1| nocturnin-like protein [Cricetulus griseus] 58 1e-06
gb|AAB62717.1| probable nocturnin protein [Mus musculus] 58 1e-06
dbj|BAE28819.1| unnamed protein product [Mus musculus] 58 1e-06
ref|XP_003501216.1| PREDICTED: nocturnin-like [Cricetulus griseus] 58 1e-06
>ref|XP_005077551.1| PREDICTED: nocturnin [Mesocricetus auratus]
Length = 429
Score = 62.0 bits (149), Expect = 8e-08
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +3
Query: 96 ELMDPTHQ-QPKFTNYGTGFKDELFVGTLDYIFYSHRHRLRVTSLLELVPEASVQATRLP 272
+L+ P Q +P +T + E TLDYI+YS RH L VTS L+L+ E + RLP
Sbjct: 347 KLLSPDGQSEPPYTTWKIRTSGECR-HTLDYIWYS-RHALSVTSALDLLTEEQIGPNRLP 404
Query: 273 YYHSPSDHIPLLAEFAFHSGSD 338
+H PSDH+ L+ +F+F+ G D
Sbjct: 405 SFHYPSDHLSLVCDFSFNEGPD 426
>ref|XP_001346851.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145474943|ref|XP_001423494.1| hypothetical protein
[Paramecium tetraurelia strain d4-2]
gi|50057240|emb|CAH03224.1| Conserved hypothetical
protein with homology to transcriptional regulator
[Paramecium tetraurelia] gi|124390554|emb|CAK56096.1|
unnamed protein product [Paramecium tetraurelia]
Length = 326
Score = 60.5 bits (145), Expect = 2e-07
Identities = 37/73 (50%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +3
Query: 114 HQQPKFTNYGTGFKDELFVGTLDYIFYSHRHRLRVTSLLELVPEASV--QATRLPYYHSP 287
H PKFTNY T FK G +DYIFY H V +L L PE SV Q LP + P
Sbjct: 262 HPFPKFTNYTTDFK-----GCIDYIFY---HNANVEKILRL-PEESVLQQEVALPNRNFP 312
Query: 288 SDHIPLLAEFAFH 326
SDH+P+LA F FH
Sbjct: 313 SDHLPILASFDFH 325
>ref|XP_004303362.1| PREDICTED: carbon catabolite repressor protein 4 homolog 2-like
[Fragaria vesca subsp. vesca]
Length = 603
Score = 60.1 bits (144), Expect = 3e-07
Identities = 46/105 (43%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Frame = +3
Query: 6 LDLKSAYSDFFEXXXXXXXXXXXXXIQGQLELMDPTHQQPKFTNYGTGFKDELFVGTLDY 185
L L SAYS F ++ Q MDPT +P FTN F +GTLDY
Sbjct: 504 LPLVSAYSSFARLGVGLG-------LEQQRRRMDPTTNEPLFTNCTRDF-----IGTLDY 551
Query: 186 IFYSHRHRLRVTSLLELVPEASVQA-TRLPYYHSPSDHIPLLAEF 317
IFY+ L V SLLEL+ E S++ T LP SDHI LLAEF
Sbjct: 552 IFYT-ADSLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 595
>ref|XP_001768291.1| predicted protein [Physcomitrella patens]
gi|162680469|gb|EDQ66905.1| predicted protein
[Physcomitrella patens]
Length = 614
Score = 60.1 bits (144), Expect = 3e-07
Identities = 44/106 (41%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Frame = +3
Query: 3 TLDLKSAYSDFFEXXXXXXXXXXXXXIQGQLELMDPTHQQPKFTNYGTGFKDELFVGTLD 182
+L L SAY+ F ++ ++ MDPT +P+FTN F +GTLD
Sbjct: 513 SLSLVSAYASF------GRMNGLGPTVEKRMRQMDPTTSEPQFTNCTRDF-----LGTLD 561
Query: 183 YIFYSHRHRLRVTSLLELVPEASVQA-TRLPYYHSPSDHIPLLAEF 317
YIFY+ L V SLLEL+ E S++ T LP SDHI LLAEF
Sbjct: 562 YIFYT-ADSLTVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 606
>gb|EOY09579.1| DNAse I-like superfamily protein isoform 1 [Theobroma cacao]
Length = 602
Score = 59.7 bits (143), Expect = 4e-07
Identities = 46/105 (43%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Frame = +3
Query: 6 LDLKSAYSDFFEXXXXXXXXXXXXXIQGQLELMDPTHQQPKFTNYGTGFKDELFVGTLDY 185
L L SAYS F ++ Q MDPT +P FTN F +GTLDY
Sbjct: 504 LPLVSAYSSFARGVGLG--------LEQQRRRMDPTTNEPLFTNCTRDF-----IGTLDY 550
Query: 186 IFYSHRHRLRVTSLLELVPEASVQA-TRLPYYHSPSDHIPLLAEF 317
IFY+ L V SLLEL+ E S++ T LP SDHI LLAEF
Sbjct: 551 IFYT-ADSLTVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 594
>gb|EMJ05152.1| hypothetical protein PRUPE_ppa022652mg [Prunus persica]
Length = 555
Score = 59.7 bits (143), Expect = 4e-07
Identities = 46/105 (43%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Frame = +3
Query: 6 LDLKSAYSDFFEXXXXXXXXXXXXXIQGQLELMDPTHQQPKFTNYGTGFKDELFVGTLDY 185
L L SAYS F ++ Q MDPT +P FTN F +GTLDY
Sbjct: 456 LPLVSAYSSFARLGVGLG-------MEQQRRRMDPTTNEPLFTNCTRDF-----IGTLDY 503
Query: 186 IFYSHRHRLRVTSLLELVPEASVQA-TRLPYYHSPSDHIPLLAEF 317
IFY+ L V SLLEL+ E S++ T LP SDHI LLAEF
Sbjct: 504 IFYT-ADSLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 547
>ref|XP_001782595.1| predicted protein [Physcomitrella patens]
gi|162665915|gb|EDQ52584.1| predicted protein
[Physcomitrella patens]
Length = 614
Score = 59.3 bits (142), Expect = 5e-07
Identities = 45/106 (42%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Frame = +3
Query: 3 TLDLKSAYSDFFEXXXXXXXXXXXXXIQGQLELMDPTHQQPKFTNYGTGFKDELFVGTLD 182
+L L SAY++F ++ Q MDPT +P+FTN F +GTLD
Sbjct: 513 SLPLVSAYAEF------GRLIGNGPTVEKQRRRMDPTTWEPQFTNCTRDF-----LGTLD 561
Query: 183 YIFYSHRHRLRVTSLLELVPEASVQA-TRLPYYHSPSDHIPLLAEF 317
YIFY+ L V SLLEL+ E S++ T LP SDHI LLAEF
Sbjct: 562 YIFYT-ADSLSVESLLELLDEDSLRKDTGLPSPEWSSDHIALLAEF 606
>ref|XP_006232386.1| PREDICTED: nocturnin isoform X1 [Rattus norvegicus]
Length = 365
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +3
Query: 96 ELMDPTHQ-QPKFTNYGTGFKDELFVGTLDYIFYSHRHRLRVTSLLELVPEASVQATRLP 272
+L+ P Q +P +T + E TLDYI+YS RH L VTS L+L+ E + RLP
Sbjct: 283 KLLSPDGQSEPPYTTWKIRTSGECR-HTLDYIWYS-RHALSVTSALDLLTEEQIGPNRLP 340
Query: 273 YYHSPSDHIPLLAEFAFHSGSD 338
+H PSDH+ L+ +F+F+ D
Sbjct: 341 SFHYPSDHLSLVCDFSFNEEPD 362
>ref|NP_612535.1| nocturnin [Rattus norvegicus] gi|565683206|sp|Q9ET55.2|NOCT_RAT
RecName: Full=Nocturnin; AltName: Full=Carbon catabolite
repression 4-like protein; AltName: Full=Circadian
deadenylase NOC gi|149064849|gb|EDM15000.1| similar to
Nocturnin (CCR4 protein homolog) [Rattus norvegicus]
Length = 428
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +3
Query: 96 ELMDPTHQ-QPKFTNYGTGFKDELFVGTLDYIFYSHRHRLRVTSLLELVPEASVQATRLP 272
+L+ P Q +P +T + E TLDYI+YS RH L VTS L+L+ E + RLP
Sbjct: 346 KLLSPDGQSEPPYTTWKIRTSGECR-HTLDYIWYS-RHALSVTSALDLLTEEQIGPNRLP 403
Query: 273 YYHSPSDHIPLLAEFAFHSGSD 338
+H PSDH+ L+ +F+F+ D
Sbjct: 404 SFHYPSDHLSLVCDFSFNEEPD 425
>gb|AGZ15277.1| putative carbon catabolite repressor protein 4-like protein 2,
partial [Taraxacum brevicorniculatum]
Length = 599
Score = 58.5 bits (140), Expect = 9e-07
Identities = 46/106 (43%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Frame = +3
Query: 3 TLDLKSAYSDFFEXXXXXXXXXXXXXIQGQLELMDPTHQQPKFTNYGTGFKDELFVGTLD 182
TL L SAYS F + Q +DP+ +P FTN F +GTLD
Sbjct: 506 TLPLVSAYSSFARIGGGLY--------EQQKRRVDPSTNEPLFTNCTRDF-----IGTLD 552
Query: 183 YIFYSHRHRLRVTSLLELVPEASVQA-TRLPYYHSPSDHIPLLAEF 317
YIFYS L V SLLEL+ E S++ T LP SDHI LLAEF
Sbjct: 553 YIFYS-ADSLTVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 597
>ref|XP_002531170.1| carbon catabolite repressor protein, putative [Ricinus communis]
gi|223529240|gb|EEF31213.1| carbon catabolite repressor
protein, putative [Ricinus communis]
Length = 603
Score = 58.2 bits (139), Expect = 1e-06
Identities = 45/105 (42%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Frame = +3
Query: 6 LDLKSAYSDFFEXXXXXXXXXXXXXIQGQLELMDPTHQQPKFTNYGTGFKDELFVGTLDY 185
L L SAYS F ++ Q MDP +P FTN F +GTLDY
Sbjct: 504 LPLVSAYSSFARLGVGLG-------LEQQRRRMDPATNEPLFTNCTRDF-----IGTLDY 551
Query: 186 IFYSHRHRLRVTSLLELVPEASVQA-TRLPYYHSPSDHIPLLAEF 317
IFY+ L V SLLEL+ E S++ T LP SDHI LLAEF
Sbjct: 552 IFYT-ADSLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 595
>ref|NP_033964.1| nocturnin [Mus musculus] gi|17380366|sp|O35710.3|NOCT_MOUSE
RecName: Full=Nocturnin; AltName: Full=Carbon catabolite
repression 4-like protein; AltName: Full=Circadian
deadenylase NOC gi|5924314|gb|AAD56547.1|AF183960_1
carbon catabolite repression 4 protein homolog [Mus
musculus] gi|9885278|gb|AAG01384.1|AF199491_1 NOCTURNIN
[Mus musculus] gi|26352748|dbj|BAC40004.1| unnamed
protein product [Mus musculus]
gi|148703247|gb|EDL35194.1| CCR4 carbon catabolite
repression 4-like (S. cerevisiae), isoform CRA_c [Mus
musculus] gi|187952215|gb|AAI39370.1| CCR4 carbon
catabolite repression 4-like (S. cerevisiae) [Mus
musculus] gi|223461128|gb|AAI39371.1| CCR4 carbon
catabolite repression 4-like (S. cerevisiae) [Mus
musculus]
Length = 429
Score = 57.8 bits (138), Expect = 1e-06
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +3
Query: 96 ELMDPTHQ-QPKFTNYGTGFKDELFVGTLDYIFYSHRHRLRVTSLLELVPEASVQATRLP 272
+L+ P Q +P +T + E TLDYI+YS RH L VTS L+L+ E + RLP
Sbjct: 347 KLLSPDGQSEPPYTTWKIRTSGECR-HTLDYIWYS-RHALSVTSALDLLTEEQIGPNRLP 404
Query: 273 YYHSPSDHIPLLAEFAFH 326
+H PSDH+ L+ +F+F+
Sbjct: 405 SFHYPSDHLSLVCDFSFN 422
>ref|XP_006501019.1| PREDICTED: nocturnin isoform X1 [Mus musculus]
Length = 372
Score = 57.8 bits (138), Expect = 1e-06
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +3
Query: 96 ELMDPTHQ-QPKFTNYGTGFKDELFVGTLDYIFYSHRHRLRVTSLLELVPEASVQATRLP 272
+L+ P Q +P +T + E TLDYI+YS RH L VTS L+L+ E + RLP
Sbjct: 290 KLLSPDGQSEPPYTTWKIRTSGECR-HTLDYIWYS-RHALSVTSALDLLTEEQIGPNRLP 347
Query: 273 YYHSPSDHIPLLAEFAFH 326
+H PSDH+ L+ +F+F+
Sbjct: 348 SFHYPSDHLSLVCDFSFN 365
>ref|XP_006501020.1| PREDICTED: nocturnin isoform X2 [Mus musculus]
Length = 365
Score = 57.8 bits (138), Expect = 1e-06
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +3
Query: 96 ELMDPTHQ-QPKFTNYGTGFKDELFVGTLDYIFYSHRHRLRVTSLLELVPEASVQATRLP 272
+L+ P Q +P +T + E TLDYI+YS RH L VTS L+L+ E + RLP
Sbjct: 283 KLLSPDGQSEPPYTTWKIRTSGECR-HTLDYIWYS-RHALSVTSALDLLTEEQIGPNRLP 340
Query: 273 YYHSPSDHIPLLAEFAFH 326
+H PSDH+ L+ +F+F+
Sbjct: 341 SFHYPSDHLSLVCDFSFN 358
>ref|XP_006363873.1| PREDICTED: carbon catabolite repressor protein 4 homolog 4-like
isoform X2 [Solanum tuberosum]
gi|565396553|ref|XP_006363874.1| PREDICTED: carbon
catabolite repressor protein 4 homolog 4-like isoform X3
[Solanum tuberosum]
Length = 364
Score = 57.8 bits (138), Expect = 1e-06
Identities = 34/70 (48%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 THQQPKFTNYGTGFKDELFVGTLDYIFYSHRHRLRVTSLLELV-PEASVQATRLPYYHSP 287
T +P FTNY GF GTLDYI +S ++ S LEL PEAS LP Y+ P
Sbjct: 296 TRGEPHFTNYTPGF-----TGTLDYILFSPSGGIKPVSYLELPEPEASDVQGGLPNYYHP 350
Query: 288 SDHIPLLAEF 317
SDH+P+ AEF
Sbjct: 351 SDHLPIGAEF 360
>ref|XP_006363872.1| PREDICTED: carbon catabolite repressor protein 4 homolog 4-like
isoform X1 [Solanum tuberosum]
Length = 390
Score = 57.8 bits (138), Expect = 1e-06
Identities = 34/70 (48%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 THQQPKFTNYGTGFKDELFVGTLDYIFYSHRHRLRVTSLLELV-PEASVQATRLPYYHSP 287
T +P FTNY GF GTLDYI +S ++ S LEL PEAS LP Y+ P
Sbjct: 322 TRGEPHFTNYTPGF-----TGTLDYILFSPSGGIKPVSYLELPEPEASDVQGGLPNYYHP 376
Query: 288 SDHIPLLAEF 317
SDH+P+ AEF
Sbjct: 377 SDHLPIGAEF 386
>gb|ERE88978.1| nocturnin-like protein [Cricetulus griseus]
Length = 365
Score = 57.8 bits (138), Expect = 1e-06
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +3
Query: 96 ELMDPTHQ-QPKFTNYGTGFKDELFVGTLDYIFYSHRHRLRVTSLLELVPEASVQATRLP 272
+L+ P Q +P +T + E TLDYI+YS RH L VTS L+L+ E + RLP
Sbjct: 283 KLLSPDGQSEPPYTTWKIRTSGECR-HTLDYIWYS-RHALSVTSALDLLTEEQIGPNRLP 340
Query: 273 YYHSPSDHIPLLAEFAFH 326
+H PSDH+ L+ +F+F+
Sbjct: 341 SFHYPSDHLSLVCDFSFN 358
>gb|AAB62717.1| probable nocturnin protein [Mus musculus]
Length = 323
Score = 57.8 bits (138), Expect = 1e-06
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +3
Query: 96 ELMDPTHQ-QPKFTNYGTGFKDELFVGTLDYIFYSHRHRLRVTSLLELVPEASVQATRLP 272
+L+ P Q +P +T + E TLDYI+YS RH L VTS L+L+ E + RLP
Sbjct: 241 KLLSPDGQSEPPYTTWKIRTSGECR-HTLDYIWYS-RHALSVTSALDLLTEEQIGPNRLP 298
Query: 273 YYHSPSDHIPLLAEFAFH 326
+H PSDH+ L+ +F+F+
Sbjct: 299 SFHYPSDHLSLVCDFSFN 316
>dbj|BAE28819.1| unnamed protein product [Mus musculus]
Length = 429
Score = 57.8 bits (138), Expect = 1e-06
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +3
Query: 96 ELMDPTHQ-QPKFTNYGTGFKDELFVGTLDYIFYSHRHRLRVTSLLELVPEASVQATRLP 272
+L+ P Q +P +T + E TLDYI+YS RH L VTS L+L+ E + RLP
Sbjct: 347 KLLSPDGQSEPPYTTWKIRTSGECR-HTLDYIWYS-RHALSVTSALDLLTEEQIGPNRLP 404
Query: 273 YYHSPSDHIPLLAEFAFH 326
+H PSDH+ L+ +F+F+
Sbjct: 405 SFHYPSDHLSLVCDFSFN 422
>ref|XP_003501216.1| PREDICTED: nocturnin-like [Cricetulus griseus]
Length = 467
Score = 57.8 bits (138), Expect = 1e-06
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +3
Query: 96 ELMDPTHQ-QPKFTNYGTGFKDELFVGTLDYIFYSHRHRLRVTSLLELVPEASVQATRLP 272
+L+ P Q +P +T + E TLDYI+YS RH L VTS L+L+ E + RLP
Sbjct: 385 KLLSPDGQSEPPYTTWKIRTSGECR-HTLDYIWYS-RHALSVTSALDLLTEEQIGPNRLP 442
Query: 273 YYHSPSDHIPLLAEFAFH 326
+H PSDH+ L+ +F+F+
Sbjct: 443 SFHYPSDHLSLVCDFSFN 460