BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00023544
         (776 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001783909.1| predicted protein [Physcomitrella patens] gi...   191   3e-46
ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus...   188   2e-45
ref|XP_006484639.1| PREDICTED: proteinaceous RNase P 1, chloropl...   186   6e-45
ref|XP_006437491.1| hypothetical protein CICLE_v10031025mg [Citr...   185   1e-44
ref|XP_006437490.1| hypothetical protein CICLE_v10031025mg [Citr...   185   1e-44
gb|EOY02610.1| Aceous RNase P 1 isoform 2 [Theobroma cacao]           182   8e-44
gb|EOY02609.1| Multidrug resistance pump, putative isoform 1 [Th...   182   8e-44
gb|EMJ26904.1| hypothetical protein PRUPE_ppa003560mg [Prunus pe...   181   2e-43
ref|XP_001752060.1| predicted protein [Physcomitrella patens] gi...   181   2e-43
gb|EOY33488.1| Aceous RNase P 3 isoform 2 [Theobroma cacao]           180   4e-43
gb|EOY33487.1| Aceous RNase P 3 isoform 1 [Theobroma cacao]           180   4e-43
ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containi...   180   5e-43
dbj|BAN18185.1| pentatricopeptide repeat protein [Physcomitrella...   178   2e-42
gb|EMJ05453.1| hypothetical protein PRUPE_ppa002044mg [Prunus pe...   176   8e-42
ref|XP_002305261.1| pentatricopeptide repeat-containing family p...   175   1e-41
ref|XP_004485760.1| PREDICTED: proteinaceous RNase P 2-like [Cic...   174   2e-41
ref|XP_001756286.1| predicted protein [Physcomitrella patens] gi...   174   3e-41
ref|XP_006353636.1| PREDICTED: proteinaceous RNase P 1, chloropl...   173   7e-41
ref|XP_002323962.2| hypothetical protein POPTR_0017s01370g [Popu...   173   7e-41
ref|XP_002881217.1| pentatricopeptide repeat-containing protein ...   173   7e-41

>ref|XP_001783909.1| predicted protein [Physcomitrella patens]
           gi|162664592|gb|EDQ51306.1| predicted protein
           [Physcomitrella patens]
          Length = 522

 Score =  191 bits (484), Expect = 3e-46
 Identities = 100/221 (45%), Positives = 135/221 (61%), Gaps = 1/221 (0%)
 Frame = +3

Query: 87  KKKTKHMNPEGQLRHALELCIREKNIEKAISLYHKSIQEG-MKLNQYMYNALLYLFSSVA 263
           + K K   PE  LR AL++C +  ++++A+ +Y K+ +EG +  NQY YN +LYL SS A
Sbjct: 23  RAKNKQYAPEQDLRRALDMCSKHADVKQALEIYDKTCKEGKIAFNQYNYNIILYLCSSAA 82

Query: 264 TSEGAPEEQQGAHEKKMALEKGFEIYEGMKSLNIPPNEXXXXXXXXXXXXNGDGGLAFDM 443
           T    P+++Q    + + +++GFE+YE MKS  +PPNE              DG LAFDM
Sbjct: 83  TDSLKPQKKQ----RILYMKRGFEVYEAMKSQGVPPNEATFTAVARLAVAKEDGDLAFDM 138

Query: 444 VKKMVDLNLSPRLRSYSPALMAFCDKGDADRAYEVDAYMAKMGITPEEEELGALLKVSCE 623
           VK+M + NLSPRLRSY+PAL  +C   +  +A+EVD +M K G+  EE EL ALLKVS  
Sbjct: 139 VKQMAEANLSPRLRSYAPALYTYCKLKNHKKAFEVDDHMKKSGVALEESELEALLKVSVG 198

Query: 624 VGREDKVYELLHRLRARSRQVSEGVASVIVEWFKGKGAGVS 746
            G EDKVY LLHRLR   R VS     VI +WF    A  +
Sbjct: 199 AGLEDKVYSLLHRLRTTVRDVSPSAVEVIQQWFTSSAAATA 239


>ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223534642|gb|EEF36338.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 589

 Score =  188 bits (478), Expect = 2e-45
 Identities = 102/223 (45%), Positives = 141/223 (63%), Gaps = 2/223 (0%)
 Frame = +3

Query: 75  ANKNKKKTKHMNPEGQLRHALELCIREKNIEKAISLYHKSIQEGMKLNQYMYNALLYLFS 254
           +NK KKK +  +PEG LR  ++ C +  N+ +A+ LY ++   G++LNQ+ YN LLYL S
Sbjct: 92  SNKAKKKARQESPEGVLRSKIDNCSKHGNLVEALRLYDEARINGVQLNQHHYNVLLYLCS 151

Query: 255 SVATSEGAPEEQQGAHEK--KMALEKGFEIYEGMKSLNIPPNEXXXXXXXXXXXXNGDGG 428
           S ++ E       GA+EK   M  ++GFEI++ M    +PPNE              D  
Sbjct: 152 SGSSVELGGN---GANEKASNMQFKRGFEIFQQMVIDKVPPNEATFTNAARLAIAMEDPE 208

Query: 429 LAFDMVKKMVDLNLSPRLRSYSPALMAFCDKGDADRAYEVDAYMAKMGITPEEEELGALL 608
           +AFD++K+M   ++ P+LRSY PAL  FC KG ADRAY VDA+MA+ G+ PEE EL ALL
Sbjct: 209 MAFDLIKQMKCFDILPKLRSYGPALFGFCKKGMADRAYAVDAHMAESGVMPEEPELSALL 268

Query: 609 KVSCEVGREDKVYELLHRLRARSRQVSEGVASVIVEWFKGKGA 737
           K+S ++ R DKVYE+LHRLRA  RQV+E    +I  WFK + A
Sbjct: 269 KLSVDIKRADKVYEMLHRLRATVRQVTETTIDIIEAWFKSEDA 311


>ref|XP_006484639.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like [Citrus sinensis]
          Length = 593

 Score =  186 bits (473), Expect = 6e-45
 Identities = 104/261 (39%), Positives = 151/261 (57%), Gaps = 4/261 (1%)
 Frame = +3

Query: 6   TLGAEVCYFSEFSRVTNKIMENS---ANKNKKKTKHMNPEGQLRHALELCIREKNIEKAI 176
           T G     FS+ S V      N+   +NK+KKK +  +PEG LRH L++C +  ++ +A+
Sbjct: 65  TTGLCTLAFSKKSTVNESSAPNTGTMSNKSKKKARRESPEGVLRHKLDMCSKRGDVFEAL 124

Query: 177 SLYHKSIQEGMKLNQYMYNALLYLFSSVATSEGAPEEQQGAHEKKMALEKGFEIYEGMKS 356
            LY  +   G+ L+Q+ YN LLY+ S    SE + E     ++  + L++GFEI++ M +
Sbjct: 125 RLYDDARSNGITLSQHHYNVLLYVCSCKCGSESS-ENGDRENDLNLGLKRGFEIFQQMIT 183

Query: 357 LNIPPNEXXXXXXXXXXXXNGDGGLAFDMVKKMVDLNLSPRLRSYSPALMAFCDKGDADR 536
             + PNE              D  +AFD+VK+M    + P+LRSY PAL  FC  G+ D+
Sbjct: 184 DKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPALFGFCKLGNTDK 243

Query: 537 AYEVDAYMAKMGITPEEEELGALLKVSCEVGREDKVYELLHRLRARSRQVSEGVASVIVE 716
           AYEVDA+M + G+ PEE EL ALLK+S +  + DKVYE+LHRLR   RQVSE    +I +
Sbjct: 244 AYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRLRTLVRQVSESTFKIIED 303

Query: 717 WFKG-KGAGVSVGDLDLGIVR 776
           WF     A + V + D+  VR
Sbjct: 304 WFDSVDAAEIGVLNWDVSKVR 324


>ref|XP_006437491.1| hypothetical protein CICLE_v10031025mg [Citrus clementina]
           gi|557539687|gb|ESR50731.1| hypothetical protein
           CICLE_v10031025mg [Citrus clementina]
          Length = 593

 Score =  185 bits (470), Expect = 1e-44
 Identities = 104/261 (39%), Positives = 150/261 (57%), Gaps = 4/261 (1%)
 Frame = +3

Query: 6   TLGAEVCYFSEFSRVTNKIMENS---ANKNKKKTKHMNPEGQLRHALELCIREKNIEKAI 176
           T G     FS+ S V      N+   +NK+KKK +  +PEG LRH L++C +  ++ +A+
Sbjct: 65  TTGLCTLAFSKKSTVNESSAPNTGTMSNKSKKKARRESPEGVLRHKLDMCSKRGDVFEAL 124

Query: 177 SLYHKSIQEGMKLNQYMYNALLYLFSSVATSEGAPEEQQGAHEKKMALEKGFEIYEGMKS 356
            LY  +   G+ L+Q+ YN LLY+ S    SE + E      +  + L++GFEI++ M +
Sbjct: 125 RLYDDARSNGITLSQHHYNVLLYVCSCKCGSESS-ENGDRETDLNLGLKRGFEIFQQMIT 183

Query: 357 LNIPPNEXXXXXXXXXXXXNGDGGLAFDMVKKMVDLNLSPRLRSYSPALMAFCDKGDADR 536
             + PNE              D  +AFD+VK+M    + P+LRSY PAL  FC  G+ D+
Sbjct: 184 DKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPALFGFCKLGNTDK 243

Query: 537 AYEVDAYMAKMGITPEEEELGALLKVSCEVGREDKVYELLHRLRARSRQVSEGVASVIVE 716
           AYEVDA+M + G+ PEE EL ALLK+S +  + DKVYE+LHRLR   RQVSE    +I +
Sbjct: 244 AYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRLRTLVRQVSESTFKIIED 303

Query: 717 WFKG-KGAGVSVGDLDLGIVR 776
           WF     A + V + D+  VR
Sbjct: 304 WFDSVDAAEIGVLNWDVSKVR 324


>ref|XP_006437490.1| hypothetical protein CICLE_v10031025mg [Citrus clementina]
           gi|557539686|gb|ESR50730.1| hypothetical protein
           CICLE_v10031025mg [Citrus clementina]
          Length = 584

 Score =  185 bits (470), Expect = 1e-44
 Identities = 104/261 (39%), Positives = 150/261 (57%), Gaps = 4/261 (1%)
 Frame = +3

Query: 6   TLGAEVCYFSEFSRVTNKIMENS---ANKNKKKTKHMNPEGQLRHALELCIREKNIEKAI 176
           T G     FS+ S V      N+   +NK+KKK +  +PEG LRH L++C +  ++ +A+
Sbjct: 65  TTGLCTLAFSKKSTVNESSAPNTGTMSNKSKKKARRESPEGVLRHKLDMCSKRGDVFEAL 124

Query: 177 SLYHKSIQEGMKLNQYMYNALLYLFSSVATSEGAPEEQQGAHEKKMALEKGFEIYEGMKS 356
            LY  +   G+ L+Q+ YN LLY+ S    SE + E      +  + L++GFEI++ M +
Sbjct: 125 RLYDDARSNGITLSQHHYNVLLYVCSCKCGSESS-ENGDRETDLNLGLKRGFEIFQQMIT 183

Query: 357 LNIPPNEXXXXXXXXXXXXNGDGGLAFDMVKKMVDLNLSPRLRSYSPALMAFCDKGDADR 536
             + PNE              D  +AFD+VK+M    + P+LRSY PAL  FC  G+ D+
Sbjct: 184 DKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPALFGFCKLGNTDK 243

Query: 537 AYEVDAYMAKMGITPEEEELGALLKVSCEVGREDKVYELLHRLRARSRQVSEGVASVIVE 716
           AYEVDA+M + G+ PEE EL ALLK+S +  + DKVYE+LHRLR   RQVSE    +I +
Sbjct: 244 AYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRLRTLVRQVSESTFKIIED 303

Query: 717 WFKG-KGAGVSVGDLDLGIVR 776
           WF     A + V + D+  VR
Sbjct: 304 WFDSVDAAEIGVLNWDVSKVR 324


>gb|EOY02610.1| Aceous RNase P 1 isoform 2 [Theobroma cacao]
          Length = 490

 Score =  182 bits (463), Expect = 8e-44
 Identities = 92/221 (41%), Positives = 135/221 (61%)
 Frame = +3

Query: 75  ANKNKKKTKHMNPEGQLRHALELCIREKNIEKAISLYHKSIQEGMKLNQYMYNALLYLFS 254
           +NK +KK    +PE  L++ L++C +   + +A+ LY +    G+ L Q+ YN LLYL +
Sbjct: 85  SNKARKKAHRESPESVLKYKLDMCSKHGKLVEALGLYEEGRSNGVTLKQHHYNVLLYLCA 144

Query: 255 SVATSEGAPEEQQGAHEKKMALEKGFEIYEGMKSLNIPPNEXXXXXXXXXXXXNGDGGLA 434
             A+ +G          K++ L++GFEI++ M    + PNE              D  LA
Sbjct: 145 REASGDGV-------ELKELGLKRGFEIFQKMVGDKVSPNETTFTSMARLAVAREDPDLA 197

Query: 435 FDMVKKMVDLNLSPRLRSYSPALMAFCDKGDADRAYEVDAYMAKMGITPEEEELGALLKV 614
           F++VK+M  L + P+LRSY PAL  FC+KG+A++ YE+DA+MA+ G+TPEE EL ALLKV
Sbjct: 198 FELVKQMKSLGIPPKLRSYGPALFGFCEKGNAEKGYELDAHMAESGVTPEEPELSALLKV 257

Query: 615 SCEVGREDKVYELLHRLRARSRQVSEGVASVIVEWFKGKGA 737
           S +    DKVY++L RLRA  RQVSE    +I +WFK + A
Sbjct: 258 SADTKNADKVYDMLQRLRATVRQVSESTFQIIEDWFKSEDA 298


>gb|EOY02609.1| Multidrug resistance pump, putative isoform 1 [Theobroma cacao]
          Length = 574

 Score =  182 bits (463), Expect = 8e-44
 Identities = 92/221 (41%), Positives = 135/221 (61%)
 Frame = +3

Query: 75  ANKNKKKTKHMNPEGQLRHALELCIREKNIEKAISLYHKSIQEGMKLNQYMYNALLYLFS 254
           +NK +KK    +PE  L++ L++C +   + +A+ LY +    G+ L Q+ YN LLYL +
Sbjct: 85  SNKARKKAHRESPESVLKYKLDMCSKHGKLVEALGLYEEGRSNGVTLKQHHYNVLLYLCA 144

Query: 255 SVATSEGAPEEQQGAHEKKMALEKGFEIYEGMKSLNIPPNEXXXXXXXXXXXXNGDGGLA 434
             A+ +G          K++ L++GFEI++ M    + PNE              D  LA
Sbjct: 145 REASGDGV-------ELKELGLKRGFEIFQKMVGDKVSPNETTFTSMARLAVAREDPDLA 197

Query: 435 FDMVKKMVDLNLSPRLRSYSPALMAFCDKGDADRAYEVDAYMAKMGITPEEEELGALLKV 614
           F++VK+M  L + P+LRSY PAL  FC+KG+A++ YE+DA+MA+ G+TPEE EL ALLKV
Sbjct: 198 FELVKQMKSLGIPPKLRSYGPALFGFCEKGNAEKGYELDAHMAESGVTPEEPELSALLKV 257

Query: 615 SCEVGREDKVYELLHRLRARSRQVSEGVASVIVEWFKGKGA 737
           S +    DKVY++L RLRA  RQVSE    +I +WFK + A
Sbjct: 258 SADTKNADKVYDMLQRLRATVRQVSESTFQIIEDWFKSEDA 298


>gb|EMJ26904.1| hypothetical protein PRUPE_ppa003560mg [Prunus persica]
          Length = 565

 Score =  181 bits (460), Expect = 2e-43
 Identities = 99/235 (42%), Positives = 140/235 (59%), Gaps = 1/235 (0%)
 Frame = +3

Query: 75  ANKNKKKTKHMNPEGQLRHALELCIREKNIEKAISLYHKSIQEGMKLNQYMYNALLYLFS 254
           +NK+KKK +  +PEG LRH L++C R+ ++ +A+ +Y ++   G+ L+ + YN LLYL S
Sbjct: 78  SNKSKKKARRESPEGVLRHKLDMCSRQGHLVEALRIYDEARSRGLPLSLHHYNVLLYLCS 137

Query: 255 SVATSEGAPEEQQGAHEKKMALEKGFEIYEGMKSLNIPPNEXXXXXXXXXXXXNGDGGLA 434
           S            GA +  + L++GFEI+  M    + PNE              D  +A
Sbjct: 138 S----------NGGADDDGVGLKRGFEIFRQMVDDKVVPNEATFTSAARLAAAAEDPEMA 187

Query: 435 FDMVKKMVDLNLSPRLRSYSPALMAFCDKGDADRAYEVDAYMAKMGITPEEEELGALLKV 614
           F +VK+M  L + P+LRSY PAL  FC KG+ADRAYEVDA+M +  +  EE E+ ALLKV
Sbjct: 188 FHLVKQMKGLGIPPKLRSYGPALFGFCKKGEADRAYEVDAHMVESKVIAEEPEISALLKV 247

Query: 615 SCEVGREDKVYELLHRLRARSRQVSEGVASVIVEWFKG-KGAGVSVGDLDLGIVR 776
           S +  + DKVYE+LHRLR   RQVSE  + V+ EWF   + A V +   D+  VR
Sbjct: 248 SSDSSKGDKVYEMLHRLRISVRQVSESTSGVVEEWFMSEEAANVGMESWDVEKVR 302


>ref|XP_001752060.1| predicted protein [Physcomitrella patens]
           gi|162697158|gb|EDQ83495.1| predicted protein
           [Physcomitrella patens]
          Length = 552

 Score =  181 bits (460), Expect = 2e-43
 Identities = 98/230 (42%), Positives = 134/230 (58%), Gaps = 1/230 (0%)
 Frame = +3

Query: 66  ENSANKNKKKTKHMNPEGQLRHALELCIREKNIEKAISLYHKSIQEG-MKLNQYMYNALL 242
           +   ++ K K K    E +LR ++++C +  +   AI +Y K + EG M  NQY YN LL
Sbjct: 12  QQDGDERKSKKKRDPAESELRRSIDMCSKHADAMGAIEIYDKVVAEGKMSFNQYSYNVLL 71

Query: 243 YLFSSVATSEGAPEEQQGAHEKKMALEKGFEIYEGMKSLNIPPNEXXXXXXXXXXXXNGD 422
           YL SS AT     E++Q      + L++GF +YE MK   +PPNE              D
Sbjct: 72  YLCSSGATVVLTDEQKQ------LCLQRGFAVYEAMKLQGVPPNEATFTAVARLAVAKDD 125

Query: 423 GGLAFDMVKKMVDLNLSPRLRSYSPALMAFCDKGDADRAYEVDAYMAKMGITPEEEELGA 602
           G LAFDMVK+M    LSPRLRSYSPAL  +C   + ++A+EVD +M   G+ PEE EL A
Sbjct: 126 GDLAFDMVKQMAKAKLSPRLRSYSPALHTYCKLKNIEKAFEVDEHMLAAGVQPEESELEA 185

Query: 603 LLKVSCEVGREDKVYELLHRLRARSRQVSEGVASVIVEWFKGKGAGVSVG 752
           LLK++ + G EDKVY LLHR+R   R +S   A V+ +WF+   AG + G
Sbjct: 186 LLKLTADAGLEDKVYPLLHRIRTTVRGLSPSTAGVVQQWFE-SSAGANAG 234


>gb|EOY33488.1| Aceous RNase P 3 isoform 2 [Theobroma cacao]
          Length = 568

 Score =  180 bits (457), Expect = 4e-43
 Identities = 95/225 (42%), Positives = 134/225 (59%)
 Frame = +3

Query: 69  NSANKNKKKTKHMNPEGQLRHALELCIREKNIEKAISLYHKSIQEGMKLNQYMYNALLYL 248
           N  N  K+K  H NPE    + L  C + K+++ AISLY  +I    +LNQ+ +N LLYL
Sbjct: 9   NPTNSTKRKKNHKNPEANFLYELNSCSKSKDLKAAISLYESAISNKTRLNQHHFNTLLYL 68

Query: 249 FSSVATSEGAPEEQQGAHEKKMALEKGFEIYEGMKSLNIPPNEXXXXXXXXXXXXNGDGG 428
            S+++T    PE       K +AL  GF +++ M +LNI PNE             GDG 
Sbjct: 69  CSTISTD---PES------KSLALTYGFRVFDHMMTLNIHPNEASITAIARLAAAKGDGD 119

Query: 429 LAFDMVKKMVDLNLSPRLRSYSPALMAFCDKGDADRAYEVDAYMAKMGITPEEEELGALL 608
            AF+M+KK+ D  + PRLR+Y PAL  FC K +A++AYEV+A + KMG++ EE ++ ALL
Sbjct: 120 YAFEMIKKLGDYRVLPRLRTYEPALFCFCQKLEAEKAYEVEADINKMGLSLEEPQIAALL 179

Query: 609 KVSCEVGREDKVYELLHRLRARSRQVSEGVASVIVEWFKGKGAGV 743
           K+S E GR + VYE L +LR   R VSE    V+ +WF  +G+ V
Sbjct: 180 KLSAETGRGEGVYEYLQKLRRGVRWVSEETGKVLEDWFSREGSEV 224


>gb|EOY33487.1| Aceous RNase P 3 isoform 1 [Theobroma cacao]
          Length = 616

 Score =  180 bits (457), Expect = 4e-43
 Identities = 95/225 (42%), Positives = 134/225 (59%)
 Frame = +3

Query: 69  NSANKNKKKTKHMNPEGQLRHALELCIREKNIEKAISLYHKSIQEGMKLNQYMYNALLYL 248
           N  N  K+K  H NPE    + L  C + K+++ AISLY  +I    +LNQ+ +N LLYL
Sbjct: 59  NPTNSTKRKKNHKNPEANFLYELNSCSKSKDLKAAISLYESAISNKTRLNQHHFNTLLYL 118

Query: 249 FSSVATSEGAPEEQQGAHEKKMALEKGFEIYEGMKSLNIPPNEXXXXXXXXXXXXNGDGG 428
            S+++T    PE       K +AL  GF +++ M +LNI PNE             GDG 
Sbjct: 119 CSTISTD---PES------KSLALTYGFRVFDHMMTLNIHPNEASITAIARLAAAKGDGD 169

Query: 429 LAFDMVKKMVDLNLSPRLRSYSPALMAFCDKGDADRAYEVDAYMAKMGITPEEEELGALL 608
            AF+M+KK+ D  + PRLR+Y PAL  FC K +A++AYEV+A + KMG++ EE ++ ALL
Sbjct: 170 YAFEMIKKLGDYRVLPRLRTYEPALFCFCQKLEAEKAYEVEADINKMGLSLEEPQIAALL 229

Query: 609 KVSCEVGREDKVYELLHRLRARSRQVSEGVASVIVEWFKGKGAGV 743
           K+S E GR + VYE L +LR   R VSE    V+ +WF  +G+ V
Sbjct: 230 KLSAETGRGEGVYEYLQKLRRGVRWVSEETGKVLEDWFSREGSEV 274


>ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 526

 Score =  180 bits (456), Expect = 5e-43
 Identities = 101/243 (41%), Positives = 146/243 (60%), Gaps = 1/243 (0%)
 Frame = +3

Query: 51  TNKIMENSANKNKKKTKHMNPEGQLRHALELCIREKNIEKAISLYHKSIQEGMKLNQYMY 230
           ++ + E  +NK +KK +  +PEG LR  L++C +  ++ +A+ LY ++   G+ L+Q+ Y
Sbjct: 22  SSAVAETMSNKARKKARRESPEGVLRFKLDMCSKRGDVVEALRLYDEARSRGVPLSQHHY 81

Query: 231 NALLYLFSSVATSEGAPEEQQGAHEKKMALEKGFEIYEGMKSLNIPPNEXXXXXXXXXXX 410
           N LLYL S      G+  ++   +   +AL++GFEI++ M    I PNE           
Sbjct: 82  NVLLYLCSC----SGSNGDENVVN---LALKRGFEIFKQMGVDGIEPNEATFTSAARLAC 134

Query: 411 XNGDGGLAFDMVKKMVDLNLSPRLRSYSPALMAFCDKGDADRAYEVDAYMAKMGITPEEE 590
              D  +AF++VK+M    + P+LRSY P L  FC KGDADRAYEVDA+M + G+  EE 
Sbjct: 135 AMEDPEMAFNLVKQMKSCGIPPKLRSYGPPLFGFCKKGDADRAYEVDAHMMESGVVAEEP 194

Query: 591 ELGALLKVSCEVGREDKVYELLHRLRARSRQVSEGVASVIVEWFKGK-GAGVSVGDLDLG 767
           EL ALL +S E  R D+VYE++HRLRA  RQVSE  A V+  WF  +  AGV   + D+G
Sbjct: 195 ELCALLGLSVESRRVDRVYEMVHRLRASVRQVSESTAEVVERWFNSEDAAGVGEENWDVG 254

Query: 768 IVR 776
            VR
Sbjct: 255 KVR 257


>dbj|BAN18185.1| pentatricopeptide repeat protein [Physcomitrella patens]
          Length = 993

 Score =  178 bits (452), Expect = 2e-42
 Identities = 103/256 (40%), Positives = 139/256 (54%), Gaps = 36/256 (14%)
 Frame = +3

Query: 87   KKKTKHMNPEGQLRHALELCIREKNIEKAISLYHKSIQEG-MKLNQYMYNALLYLFSSVA 263
            + K K   PE  LR AL++C +  ++++A+ +Y K+ +EG +  NQY YN +LYL SS A
Sbjct: 241  RAKNKQYAPEQDLRRALDMCSKHADVKQALEIYDKTCKEGKIAFNQYNYNIILYLCSSAA 300

Query: 264  TSEGAPE----EQQGAHE------------------------KKMA-------LEKGFEI 338
            T    P+    E++G+ +                        KK+        +++GFE+
Sbjct: 301  TDSLKPQKSGNERRGSEQVNHNRGPLDLSGIVESKNEALTEPKKLEEEQRILYMKRGFEV 360

Query: 339  YEGMKSLNIPPNEXXXXXXXXXXXXNGDGGLAFDMVKKMVDLNLSPRLRSYSPALMAFCD 518
            YE MKS  +PPNE              DG LAFDMVK+M + NLSPRLRSY+PAL  +C 
Sbjct: 361  YEAMKSQGVPPNEATFTAVARLAVAKEDGDLAFDMVKQMAEANLSPRLRSYAPALYTYCK 420

Query: 519  KGDADRAYEVDAYMAKMGITPEEEELGALLKVSCEVGREDKVYELLHRLRARSRQVSEGV 698
              +  +A+EVD +M K G+  EE EL ALLKVS   G EDKVY LLHRLR   R VS   
Sbjct: 421  LKNHKKAFEVDDHMKKSGVALEESELEALLKVSVGAGLEDKVYSLLHRLRTTVRDVSPSA 480

Query: 699  ASVIVEWFKGKGAGVS 746
              VI +WF    A  +
Sbjct: 481  VEVIQQWFTSSAAATA 496


>gb|EMJ05453.1| hypothetical protein PRUPE_ppa002044mg [Prunus persica]
          Length = 724

 Score =  176 bits (446), Expect = 8e-42
 Identities = 99/224 (44%), Positives = 128/224 (57%)
 Frame = +3

Query: 66  ENSANKNKKKTKHMNPEGQLRHALELCIREKNIEKAISLYHKSIQEGMKLNQYMYNALLY 245
           E    K  KK     PE ++R  L++C +  ++  AI  Y  + +E +KL QY Y  LLY
Sbjct: 169 EEKRGKGSKKYDVDAPEVKMRIGLDMCSKRGDVMGAIKFYDLAQREEIKLEQYHYTVLLY 228

Query: 246 LFSSVATSEGAPEEQQGAHEKKMALEKGFEIYEGMKSLNIPPNEXXXXXXXXXXXXNGDG 425
           L SS A              KK AL++GFEIYE M   N+P NE             GDG
Sbjct: 229 LCSSAAVEV-----------KKYALQRGFEIYEKMCLDNVPMNEAALTSVARMAMSMGDG 277

Query: 426 GLAFDMVKKMVDLNLSPRLRSYSPALMAFCDKGDADRAYEVDAYMAKMGITPEEEELGAL 605
            +AFDMVK+M  L ++PRLRSY PAL AFC  GD D+A+ V+ +M   G+ PEE EL AL
Sbjct: 278 DMAFDMVKQMKSLGINPRLRSYGPALSAFCHSGDIDKAFAVEKHMLDHGVYPEEPELEAL 337

Query: 606 LKVSCEVGREDKVYELLHRLRARSRQVSEGVASVIVEWFKGKGA 737
           L+VS  VG+ DKVY +LH+LR   R+VS   A +I+ WF  K A
Sbjct: 338 LRVSVGVGKGDKVYYMLHKLRTSVRRVSPSTADLIMNWFHSKEA 381


>ref|XP_002305261.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222848225|gb|EEE85772.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 516

 Score =  175 bits (444), Expect = 1e-41
 Identities = 96/236 (40%), Positives = 137/236 (58%), Gaps = 6/236 (2%)
 Frame = +3

Query: 87  KKKTKHMNPEGQLRHALELCIREKNIEKAISLYHKSIQEGMKLNQYMYNALLYLFSSVAT 266
           KKK +   PEG LR  L++C +  ++ + + LY ++ + G++LNQ+ YN +LYL S    
Sbjct: 33  KKKARRDAPEGVLRFKLDMCSKVGDVVEGLRLYDEARRNGVELNQHHYNVMLYLCSQNRG 92

Query: 267 SEGAPEEQQGAHEKKMALEKGFEIYEGMKSLNIPPNEXXXXXXXXXXXXNGDGGLAFDMV 446
             G+        + K+A ++GFEI++ M    +PPNE              D  +AFD+V
Sbjct: 93  ENGS--------DLKLACKRGFEIFQQMIIDKVPPNEATFTNAARLASVMEDPEMAFDLV 144

Query: 447 KKMVDLNLSPRLRSYSPALMAFCDKGDADRAYEVDAYMAKMGITPEEEELGALLKVSCEV 626
           K+M    + P+LRSY P L  FC KG  D+AYEVDA+M + G+  EE EL +LLK+S +V
Sbjct: 145 KQMKGFGIMPKLRSYGPPLFGFCKKGMVDKAYEVDAHMIESGVVAEEPELSSLLKLSADV 204

Query: 627 GREDKVYELLHRLRARSRQVSEGVASVIVEWFKGK-GAGVSVGDLDL-----GIVR 776
              DK+YELLHRLR   RQV E    VI +WFK +  A +  GD D+     G+VR
Sbjct: 205 NNADKMYELLHRLRTSVRQVMESTVGVIEDWFKSEHAAKIGKGDWDVIKVKEGVVR 260


>ref|XP_004485760.1| PREDICTED: proteinaceous RNase P 2-like [Cicer arietinum]
          Length = 554

 Score =  174 bits (442), Expect = 2e-41
 Identities = 96/231 (41%), Positives = 137/231 (59%)
 Frame = +3

Query: 84  NKKKTKHMNPEGQLRHALELCIREKNIEKAISLYHKSIQEGMKLNQYMYNALLYLFSSVA 263
           NKKK  +  PE + +  L  C + K+   AISLY  ++   ++LNQ+  N LLYL S+  
Sbjct: 16  NKKKKTNKTPEIKFQFELNSCSKSKDFRGAISLYDDAVSNNIRLNQHHLNTLLYLCSNAV 75

Query: 264 TSEGAPEEQQGAHEKKMALEKGFEIYEGMKSLNIPPNEXXXXXXXXXXXXNGDGGLAFDM 443
           T+            K++AL+ GF I+  M SLN+ PNE            NGDG  AF++
Sbjct: 76  TNPSL---------KQLALDYGFRIFNHMSSLNVIPNEATVATVARLAAANGDGDRAFEL 126

Query: 444 VKKMVDLNLSPRLRSYSPALMAFCDKGDADRAYEVDAYMAKMGITPEEEELGALLKVSCE 623
           VK + + N++PRLR+Y PAL  FC+  D+D+AYEV+ +M  +G++ EE E+ ALLKVS +
Sbjct: 127 VKNIGNYNVAPRLRTYDPALFCFCEFLDSDKAYEVEEHMNSVGVSLEEAEIAALLKVSAK 186

Query: 624 VGREDKVYELLHRLRARSRQVSEGVASVIVEWFKGKGAGVSVGDLDLGIVR 776
            GR D+VY  LH+LR+  R V E  A+VI EWF+   A    G+ DL + R
Sbjct: 187 KGRADRVYRYLHKLRSDVRCVGELTATVIEEWFQSDEAR-EAGEEDLDVRR 236


>ref|XP_001756286.1| predicted protein [Physcomitrella patens]
           gi|162692325|gb|EDQ78682.1| predicted protein
           [Physcomitrella patens]
          Length = 526

 Score =  174 bits (441), Expect = 3e-41
 Identities = 95/225 (42%), Positives = 135/225 (60%), Gaps = 1/225 (0%)
 Frame = +3

Query: 66  ENSANKNKKKTKHMNPEGQLRHALELCIREKNIEKAISLYHKSIQEG-MKLNQYMYNALL 242
           +N  ++N KK K  + E +LR ++++C +  ++  AI +Y K + EG +  NQY YN LL
Sbjct: 13  QNGDDRNHKKKKD-SAESELRRSIDMCSKFADVMGAIEIYDKVVAEGKVAFNQYTYNVLL 71

Query: 243 YLFSSVATSEGAPEEQQGAHEKKMALEKGFEIYEGMKSLNIPPNEXXXXXXXXXXXXNGD 422
           YL SS AT     +E     E+++ LE+GF IYE MK   +PPNE              D
Sbjct: 72  YLCSSAATEVVVTDE-----ERRLCLERGFVIYEAMKLQEVPPNEATFTAVARLAVAKED 126

Query: 423 GGLAFDMVKKMVDLNLSPRLRSYSPALMAFCDKGDADRAYEVDAYMAKMGITPEEEELGA 602
           G LAFDMVK+M +  LSPRLRSYSPAL  +C   + ++A+EV+ +M   G+  EE EL A
Sbjct: 127 GDLAFDMVKQMANAKLSPRLRSYSPALHIYCKLKNFEKAFEVEEHMLAAGVQAEESELEA 186

Query: 603 LLKVSCEVGREDKVYELLHRLRARSRQVSEGVASVIVEWFKGKGA 737
           LL+++ + G E KVY LLHR+R   R +S   A V+ +WF+   A
Sbjct: 187 LLQLATDFGLEYKVYSLLHRIRTTVRGLSPSCAGVVQQWFESSPA 231


>ref|XP_006353636.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like isoform X1 [Solanum
           tuberosum] gi|565374171|ref|XP_006353637.1| PREDICTED:
           proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like isoform X2 [Solanum
           tuberosum]
          Length = 574

 Score =  173 bits (438), Expect = 7e-41
 Identities = 96/235 (40%), Positives = 135/235 (57%), Gaps = 1/235 (0%)
 Frame = +3

Query: 75  ANKNKKKTKHMNPEGQLRHALELCIREKNIEKAISLYHKSIQEGMKLNQYMYNALLYLFS 254
           +N++ KK +   PE  LRH L+ C +  ++++AI LY ++    + LN + YN LLYL S
Sbjct: 78  SNRSAKKARRDAPESVLRHQLDQCSKRGDLQEAIRLYEEAKLNNITLNVHHYNVLLYLCS 137

Query: 255 SVATSEGAPEEQQGAHEKKMALEKGFEIYEGMKSLNIPPNEXXXXXXXXXXXXNGDGGLA 434
           S + +EG              +EKGF+I++ M    + PNE              D  +A
Sbjct: 138 SGSGTEGC------------GIEKGFQIFKQMGVNGVAPNEATFTSAARLAVAKQDPEMA 185

Query: 435 FDMVKKMVDLNLSPRLRSYSPALMAFCDKGDADRAYEVDAYMAKMGITPEEEELGALLKV 614
           FD+VKKM    + P+LRSY PAL  FC+KG AD+AYEVD +M + G+  EE EL ALLKV
Sbjct: 186 FDLVKKMKSFGVPPKLRSYGPALFGFCEKGMADKAYEVDVHMGESGVVAEEAELSALLKV 245

Query: 615 SCEVGREDKVYELLHRLRARSRQVSEGVASVIVEWFKGK-GAGVSVGDLDLGIVR 776
           S    + DKVYE++HRLR   RQV E  A V+ +WF  +  A V + D D+  V+
Sbjct: 246 SSFSKKADKVYEMMHRLRGSVRQVCEETAGVVEDWFNSEFAAEVGLQDWDVRKVK 300


>ref|XP_002323962.2| hypothetical protein POPTR_0017s01370g [Populus trichocarpa]
           gi|550319033|gb|EEF04095.2| hypothetical protein
           POPTR_0017s01370g [Populus trichocarpa]
          Length = 578

 Score =  173 bits (438), Expect = 7e-41
 Identities = 92/219 (42%), Positives = 125/219 (57%)
 Frame = +3

Query: 81  KNKKKTKHMNPEGQLRHALELCIREKNIEKAISLYHKSIQEGMKLNQYMYNALLYLFSSV 260
           + KKK +   PEG L+  L+ C +  ++ + + LY ++ + G++LNQ+ YN LLYL S  
Sbjct: 96  REKKKARREAPEGVLKFKLDTCSKRGDVVEGLRLYDEARKNGVELNQHHYNVLLYLCS-- 153

Query: 261 ATSEGAPEEQQGAHEKKMALEKGFEIYEGMKSLNIPPNEXXXXXXXXXXXXNGDGGLAFD 440
                    Q G        ++GFEI++ M    +PPNE              D  +AFD
Sbjct: 154 ---------QNGGENVSDLRKQGFEIFQQMIIDKVPPNEATFTNAARLASAMEDPEMAFD 204

Query: 441 MVKKMVDLNLSPRLRSYSPALMAFCDKGDADRAYEVDAYMAKMGITPEEEELGALLKVSC 620
           +VK+M    + P+LRSY P L  FC KG AD+AYEVDA+M + G+  EE EL ALLKVS 
Sbjct: 205 LVKQMKGFGILPKLRSYGPPLFGFCKKGMADKAYEVDAHMIEYGVVAEEPELSALLKVSA 264

Query: 621 EVGREDKVYELLHRLRARSRQVSEGVASVIVEWFKGKGA 737
           +V   DKVYELLHRLR   RQ +E    +I +WFK K A
Sbjct: 265 DVNNADKVYELLHRLRTSVRQATESTVGIIEDWFKSKHA 303


>ref|XP_002881217.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327056|gb|EFH57476.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 572

 Score =  173 bits (438), Expect = 7e-41
 Identities = 95/225 (42%), Positives = 132/225 (58%), Gaps = 1/225 (0%)
 Frame = +3

Query: 66  ENSANKNKKKTKHMNPEGQLRHALELCIREKNIEKAISLYHKSIQEGMKLNQYMYNALLY 245
           EN + K KKK    +PE  L+  L++C ++ ++ +A+ LY ++ + G++L+QY YN LLY
Sbjct: 81  ENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLY 140

Query: 246 LFS-SVATSEGAPEEQQGAHEKKMALEKGFEIYEGMKSLNIPPNEXXXXXXXXXXXXNGD 422
           + S + A +E +P            L +GF+I++ M    + PNE              D
Sbjct: 141 VCSLAEAATESSPNP---------GLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDD 191

Query: 423 GGLAFDMVKKMVDLNLSPRLRSYSPALMAFCDKGDADRAYEVDAYMAKMGITPEEEELGA 602
             +AFDMVK+M    + PRLRSY PAL  FC KGDA +AYEVDA+M +  + PEE EL A
Sbjct: 192 PEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDAGKAYEVDAHMVESEVVPEEPELAA 251

Query: 603 LLKVSCEVGREDKVYELLHRLRARSRQVSEGVASVIVEWFKGKGA 737
           LLKVS +    DKVYE+L RLR   RQVS+     I EWFK + A
Sbjct: 252 LLKVSMDTKNADKVYEMLQRLRDLVRQVSKSTFDTIEEWFKSEAA 296