BLASTX nr result

ID: Ephedra26_contig00023433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00023433
         (629 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299329.2| hypothetical protein POPTR_0001s13460g [Popu...    57   6e-06
ref|XP_004241451.1| PREDICTED: auxin-induced protein 10A5-like [...    56   1e-05

>ref|XP_002299329.2| hypothetical protein POPTR_0001s13460g [Populus trichocarpa]
           gi|550347165|gb|EEE84134.2| hypothetical protein
           POPTR_0001s13460g [Populus trichocarpa]
          Length = 229

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
 Frame = -2

Query: 613 LVKERKAKSSSYVELGCEPSPKMFHEFQYEKIILEEEKKDGMAPKGCFGVR-SLDGNKVY 437
           LV+    KS SY      P  K+  E  +++   +  ++  +AP+GCF V       +  
Sbjct: 104 LVRSLTPKSKSY------PHIKVSLEDDHDR---KHSRQRRVAPEGCFSVYVGPQKQRFV 154

Query: 436 IQTRHLKHPLMKKMLEMAESEYGHCDSGLPITIPYDLSTFHHLLWIVCTDDLD 278
           I+T +  HPL K +LE AESEYG+   G P+T+P ++  F+ +L  V   ++D
Sbjct: 155 IKTEYANHPLFKMLLEEAESEYGYSSEG-PLTLPCNVDIFYRVLMAVEDTNID 206


>ref|XP_004241451.1| PREDICTED: auxin-induced protein 10A5-like [Solanum lycopersicum]
          Length = 170

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
 Frame = -2

Query: 490 MAPKGCFGVR-SLDGNKVYIQTRHLKHPLMKKMLEMAESEYGHCDSGLPITIPYDLSTFH 314
           +AP+GCF V    +  K  I+ ++  HPL K +LE AE EYG+C  G PI +P D++ FH
Sbjct: 53  LAPQGCFCVYVGPEKEKFTIKAKYANHPLFKMLLEDAEMEYGYCSQG-PILLPCDVNLFH 111

Query: 313 HLL 305
            +L
Sbjct: 112 KVL 114


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