BLASTX nr result
ID: Ephedra26_contig00023428
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00023428
(567 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera] 72 5e-19
ref|XP_004509513.1| PREDICTED: uncharacterized protein LOC101489... 60 4e-16
gb|AGH20677.1| reverse transcriptase, partial [Olimarabidopsis c... 57 4e-16
gb|ABR67407.1| integrase [Cucumis melo subsp. melo] 55 1e-15
emb|CAN81130.1| hypothetical protein VITISV_003944 [Vitis vinifera] 64 4e-15
gb|EOY10712.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ... 69 4e-15
gb|EOY32548.1| Uncharacterized protein TCM_040529 [Theobroma cacao] 72 2e-14
emb|CAN76379.1| hypothetical protein VITISV_017862 [Vitis vinifera] 66 3e-14
emb|CAN70885.1| hypothetical protein VITISV_018629 [Vitis vinifera] 58 9e-14
gb|ABB46911.2| retrotransposon protein, putative, unclassified [... 60 1e-13
emb|CAN81398.1| hypothetical protein VITISV_018727 [Vitis vinifera] 62 1e-13
gb|ABN08283.1| hypothetical protein MtrDRAFT_AC155889g9v2 [Medic... 66 1e-13
gb|EOY21752.1| Integrase, catalytic region, Zinc finger, CCHC-ty... 62 1e-13
emb|CAN63196.1| hypothetical protein VITISV_035792 [Vitis vinifera] 59 4e-13
gb|AAL79695.1|AC087599_14 putative gag-pol polyprotein [Oryza sa... 54 5e-13
emb|CAN69531.1| hypothetical protein VITISV_009937 [Vitis vinifera] 63 6e-13
emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera] 62 9e-13
emb|CAN65377.1| hypothetical protein VITISV_014188 [Vitis vinifera] 62 9e-13
gb|ABA97460.1| retrotransposon protein, putative, Ty1-copia subc... 63 2e-12
gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subc... 63 4e-12
>emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]
Length = 1291
Score = 72.0 bits (175), Expect(2) = 5e-19
Identities = 33/70 (47%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Frame = -2
Query: 446 QIFHLHIKSAFLHGEILEDIYMK*LDGF--VQNSNKFCKLRKALDGLKHVPRAWYEKLEK 273
+++HL +KSAFL+G +LE+IY++ +GF + + +K KL KAL GLK PRAWY +++
Sbjct: 893 KVYHLDVKSAFLNGILLEEIYVQQPEGFEVIGHEHKVYKLHKALYGLKQAPRAWYSRIDS 952
Query: 272 HLLQKGLTKS 243
HL+Q G +S
Sbjct: 953 HLIQLGFRRS 962
Score = 48.1 bits (113), Expect(2) = 5e-19
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = -3
Query: 232 LMLHQEAHIRKLHQTFKLNKDRGRKTPLNLGYNILKDDENK-EDVKKFMSLIGSLIYLIY 56
+ + Q + + + FKL + TPL I K+D K E+ + SL+G L+YL
Sbjct: 1002 IFISQRKYAMDILKKFKLESCKEVATPLAQNEKISKNDGEKLEEPSAYRSLVGILLYLTV 1061
Query: 55 TRPDIHFIVCYLSRYMKS 2
TRPD+ F LSR+M S
Sbjct: 1062 TRPDLMFPASLLSRFMSS 1079
>ref|XP_004509513.1| PREDICTED: uncharacterized protein LOC101489680, partial [Cicer
arietinum]
Length = 1036
Score = 60.1 bits (144), Expect(2) = 4e-16
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = -2
Query: 461 SHDDGQIFHLHIKSAFLHGEILEDIYMK*LDGFVQNS--NKFCKLRKALDGLKHVPRAWY 288
SH ++F + +KSAFL+G + E +Y+K GF + N KL KAL GLK PRAWY
Sbjct: 98 SHKLIKLFQMDVKSAFLNGFLNEQVYVKQPPGFENQAKPNHVFKLTKALYGLKQAPRAWY 157
Query: 287 EKLEKHLLQKGLTKSGAD 234
E+L L++ + D
Sbjct: 158 ERLSSFLIENNFQRGKID 175
Score = 50.4 bits (119), Expect(2) = 4e-16
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = -3
Query: 241 EQILMLHQEAHIRKLHQTFKLNKDRGRKTPLNLGYNILKDDENKE-DVKKFMSLIGSLIY 65
E+ + + QE +I+ L +K+N+ + TP++ ++ KD+ K K++ +IGSL+Y
Sbjct: 213 EKGIFVCQEKYIKDLLIKYKMNESKIMTTPMHPSTSLEKDENGKSVSEKEYRGMIGSLLY 272
Query: 64 LIYTRPDIHFIVCYLSRYMKS 2
L +RPDI F V +RY +
Sbjct: 273 LTASRPDIMFAVGLCARYQSA 293
>gb|AGH20677.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
Length = 286
Score = 56.6 bits (135), Expect(2) = 4e-16
Identities = 26/74 (35%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Frame = -2
Query: 461 SHDDGQIFHLHIKSAFLHGEILEDIYMK*LDGFV--QNSNKFCKLRKALDGLKHVPRAWY 288
+ ++ +I + +KSAFL+G++ E++Y++ G++ +K KL+KAL GLK PRAW
Sbjct: 97 AQNEWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIIKGEEDKVLKLKKALYGLKQAPRAWN 156
Query: 287 EKLEKHLLQKGLTK 246
+++K+ +K K
Sbjct: 157 TRIDKYFKEKDFIK 170
Score = 53.9 bits (128), Expect(2) = 4e-16
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = -3
Query: 232 LMLHQEAHIRKLHQTFKLNKDRGRKTPLNLGYNILKDDENKE-DVKKFMSLIGSLIYLIY 56
+ + QE + +K+ + FK++ TP+ G K++E + D F SL+GSL YL
Sbjct: 211 IFITQEGYAKKVLKRFKMDDSNPVSTPMECGIKFSKNEEGERVDPTLFKSLVGSLRYLTC 270
Query: 55 TRPDIHFIVCYLSRYM 8
TRPDI + V +SRYM
Sbjct: 271 TRPDILYAVGVVSRYM 286
>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
Length = 1281
Score = 55.1 bits (131), Expect(2) = 1e-15
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = -2
Query: 446 QIFHLHIKSAFLHGEILEDIYMK*LDGFVQNSN--KFCKLRKALDGLKHVPRAWYEKLEK 273
++ + IKSAFL+G + ++I++ G+VQ K KL+KAL GLK PRAWY +++
Sbjct: 903 KVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDS 962
Query: 272 HLLQKGLTK 246
L+ G +
Sbjct: 963 FFLKTGFRR 971
Score = 53.5 bits (127), Expect(2) = 1e-15
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = -3
Query: 259 KV*QNQEQILMLHQEAHIRKLHQTFKLNKDRGRKTPLNLGYNILKDDENKE-DVKKFMSL 83
+V QN+ +I+ + Q+ + L + F++ TP++ + KDD + D + SL
Sbjct: 1008 EVNQNEGEIV-ISQQKYAHDLLKKFRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSL 1066
Query: 82 IGSLIYLIYTRPDIHFIVCYLSRYM 8
+GSL+YL TRPDI F+V LSR+M
Sbjct: 1067 VGSLMYLTATRPDILFVVSMLSRFM 1091
>emb|CAN81130.1| hypothetical protein VITISV_003944 [Vitis vinifera]
Length = 1236
Score = 63.5 bits (153), Expect(2) = 4e-15
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Frame = -2
Query: 434 LHIKSAFLHGEILEDIYMK*LDGFVQNS--NKFCKLRKALDGLKHVPRAWYEKLEKHLLQ 261
L +K+AFLHG++ ED+YM +GF+ N CKLRK+L GLK PR WY+K + + +
Sbjct: 869 LDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHR 928
Query: 260 KGLTKSGAD 234
G + AD
Sbjct: 929 IGFKRCEAD 937
Score = 43.5 bits (101), Expect(2) = 4e-15
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Frame = -3
Query: 232 LMLHQEAHIRKLHQTFKLNKDRGRKTPLNLGYNILKDDENKEDVKK-------FMSLIGS 74
L L Q +++K+ F +N+ + TPL + + K+ K + ++ + S IGS
Sbjct: 967 LKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGS 1026
Query: 73 LIY-LIYTRPDIHFIVCYLSRYM 8
L+Y ++ TRPDI V +SR+M
Sbjct: 1027 LMYTMVCTRPDIAHAVGVVSRFM 1049
>gb|EOY10712.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma
cacao]
Length = 800
Score = 68.9 bits (167), Expect(2) = 4e-15
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Frame = -2
Query: 443 IFHLHIKSAFLHGEILEDIYMK*LDGFVQ--NSNKFCKLRKALDGLKHVPRAWYEKLEKH 270
I+HL IKSAFL+G I E+IY+ +GFV+ +K CKL KAL GLK RAWYE+++ +
Sbjct: 467 IWHLDIKSAFLNGTISENIYVNQREGFVEPGKEDKVCKLTKALYGLKQALRAWYERMDNY 526
Query: 269 LLQKGLTKSGADPNASPRST 210
L +G + ++ +ST
Sbjct: 527 LQSQGFVRIVSEHTLYVKST 546
Score = 38.1 bits (87), Expect(2) = 4e-15
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = -3
Query: 226 LHQEAHIRKLHQTFKLNKDRGRKTPLNLGYNILKDDENKE-DVKKFMSLIGSLIYLIYTR 50
+ +E + L + F + + + TPL +G + K+ E +V ++ +IGSL+YL ++
Sbjct: 578 MKKEKYAGVLLKKFSMGECKPVSTPLVVGSKLSKEAGGVEANVVQYKRIIGSLLYLSASK 637
Query: 49 PDIHFIVCYLSRYMKS 2
DI F + SR+M++
Sbjct: 638 LDIMFATSFFSRFMQA 653
>gb|EOY32548.1| Uncharacterized protein TCM_040529 [Theobroma cacao]
Length = 1266
Score = 71.6 bits (174), Expect(2) = 2e-14
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Frame = -2
Query: 446 QIFHLHIKSAFLHGEILEDIYMK*LDGFVQNS--NKFCKLRKALDGLKHVPRAWYEKLEK 273
+I+H+ +KSAFL+G I EDIY++ +GFV+ +K CKL KAL GLK PRAWY+K++
Sbjct: 909 RIWHMDVKSAFLNGTISEDIYVEQPEGFVEKGKEDKVCKLIKALYGLKQAPRAWYKKIDA 968
Query: 272 HLLQKGLTKSGADPNASPRSTYQEI 198
+L S ++P +S+ +I
Sbjct: 969 YLRSNKFFCSESEPTLYVKSSLGKI 993
Score = 33.1 bits (74), Expect(2) = 2e-14
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 10/63 (15%)
Frame = -3
Query: 160 KTPLNLGYNILKDDENKEDVKKFM----------SLIGSLIYLIYTRPDIHFIVCYLSRY 11
K+ LN N +K + + D+ + LIG L+YL +RPDI + LSR+
Sbjct: 1011 KSDLNSFRNKMKSEFDMSDLGEMSYFLGLAIQQRKLIGCLLYLSASRPDIMYTTSLLSRF 1070
Query: 10 MKS 2
M+S
Sbjct: 1071 MQS 1073
>emb|CAN76379.1| hypothetical protein VITISV_017862 [Vitis vinifera]
Length = 639
Score = 65.9 bits (159), Expect(2) = 3e-14
Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = -2
Query: 443 IFHLHIKSAFLHGEILEDIYMK*LDGFVQNSN--KFCKLRKALDGLKHVPRAWYEKLEKH 270
I+ L +KSAFLHGE+ E+++++ G+ Q N K KL+KAL GLK PRAW+ ++E H
Sbjct: 44 IYQLDVKSAFLHGELSEEVFVEQPRGYEQKDNLHKVYKLKKALYGLKQAPRAWFSRIEAH 103
Query: 269 LLQKGLTK 246
+ +G +
Sbjct: 104 FVNEGFER 111
Score = 38.1 bits (87), Expect(2) = 3e-14
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -3
Query: 157 TPLNLGYNILKDDEN-KEDVKKFMSLIGSLIYLIYTRPDIHFIV 29
+P+ +G+ + KD+ K D F ++GSL+YL TRP + FI+
Sbjct: 141 SPIVIGFKVFKDENGIKVDATFFKKIVGSLMYLTTTRPYLMFII 184
>emb|CAN70885.1| hypothetical protein VITISV_018629 [Vitis vinifera]
Length = 1003
Score = 57.8 bits (138), Expect(2) = 9e-14
Identities = 30/69 (43%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Frame = -2
Query: 452 DGQIFHLHIKSAFLHGEILEDIYMK*LDGFVQNS--NKFCKLRKALDGLKHVPRAWYEKL 279
D ++ +++K+AFL+G I E++Y++ GF + N KL++AL GLK PRAWYE+L
Sbjct: 187 DFVLYQMYVKNAFLNGFINEEVYVEQPPGFQSFNFPNHVFKLKRALYGLKQAPRAWYERL 246
Query: 278 EKHLLQKGL 252
K LL+ L
Sbjct: 247 SKFLLKMQL 255
Score = 44.7 bits (104), Expect(2) = 9e-14
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = -3
Query: 226 LHQEAHIRKLHQTFKLNKDRGRKTPLNLGYNILKDDENKEDVKK-FMSLIGSLIYLIYTR 50
++Q +IR L + F + + + KTP++ + KD+++K + +IGSL+YL +R
Sbjct: 261 INQAKYIRDLLKRFNMEEAKTMKTPMSSSIKLDKDEKSKSIYSTMYRGMIGSLLYLTASR 320
Query: 49 PDIHFIVCYLSRY 11
PDI + V +R+
Sbjct: 321 PDIMYSVFLCARF 333
>gb|ABB46911.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1453
Score = 60.1 bits (144), Expect(2) = 1e-13
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = -2
Query: 443 IFHLHIKSAFLHGEILEDIYMK*LDGFVQNS--NKFCKLRKALDGLKHVPRAWYEKLEKH 270
++ + +KS FL+G I E++Y+K GF N KL KAL GLK PRAWY++L+
Sbjct: 1143 LYQMDVKSVFLNGFIQEEVYVKQPPGFENPDFPNHVFKLSKALYGLKLAPRAWYDRLKNF 1202
Query: 269 LLQKGLTKSGAD 234
LL KG T D
Sbjct: 1203 LLAKGFTMGKVD 1214
Score = 42.0 bits (97), Expect(2) = 1e-13
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = -3
Query: 133 ILKDDENKE--DVKKFMSLIGSLIYLIYTRPDIHFIVCYLSRYMKS 2
+L DE+ E D K++ S+ GSL+YL +RPDI F VC +R+ S
Sbjct: 1255 VLDPDEDGEAVDQKEYRSMNGSLLYLTASRPDIQFAVCLCARFQAS 1300
>emb|CAN81398.1| hypothetical protein VITISV_018727 [Vitis vinifera]
Length = 954
Score = 61.6 bits (148), Expect(2) = 1e-13
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Frame = -2
Query: 443 IFHLHIKSAFLHGEILEDIYMK*LDGFVQNS--NKFCKLRKALDGLKHVPRAWYEKLEKH 270
I + +KSAFL+G + E+I+++ L+GF+ K L+ AL GLK PR WY K++ H
Sbjct: 507 IHQMDVKSAFLNGYLEEEIFVEQLEGFIVKGMEEKVYLLKNALYGLKQAPRXWYNKIDSH 566
Query: 269 LLQKGLTKS 243
LL G TKS
Sbjct: 567 LLGLGFTKS 575
Score = 40.4 bits (93), Expect(2) = 1e-13
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = -3
Query: 211 HIRKLHQTFKLNKDRGRKTPLNLGYNILKDD-ENKEDVKKFMSLIGSLIYLIYTRPDIHF 35
+ +++ + FK+ + TP+N K+D K D + + ++IG L+YL TRPDI
Sbjct: 594 YAKEILKKFKMEEYNPSATPMNQNEKFCKEDGAAKADERLYKTIIGCLMYLTTTRPDIMN 653
Query: 34 IVCYLS 17
+V LS
Sbjct: 654 VVSLLS 659
>gb|ABN08283.1| hypothetical protein MtrDRAFT_AC155889g9v2 [Medicago truncatula]
Length = 531
Score = 65.9 bits (159), Expect(2) = 1e-13
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = -2
Query: 443 IFHLHIKSAFLHGEILEDIYMK*LDGFVQN--SNKFCKLRKALDGLKHVPRAWYEKLEKH 270
+ L IK+AFLHGE+ E++YM GF N S+ C+LR++L GLK PRAW+ +
Sbjct: 184 LHQLDIKNAFLHGELHEEVYMAQPPGFTVNGASHLVCQLRRSLYGLKQSPRAWFVRFSNV 243
Query: 269 LLQKGLTKSGADPNASPRSTYQEITS 192
L + G+T+ D ++SP ++ + S
Sbjct: 244 LQEYGMTRCEVDYSSSPCIPHRPLAS 269
Score = 36.2 bits (82), Expect(2) = 1e-13
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = -3
Query: 169 RGRKTPLNLGYNILKDD-ENKEDVKKFMSLIGSLIYLIYTRPDIHFIVCYLSRYMKS 2
R TP++ +L E +D ++ L+G L YL TRPDI F+V +S+++ +
Sbjct: 307 RPSDTPMDPNVKLLPGQREPLKDPGRYRRLVGKLNYLTVTRPDITFVVSVVSQFLNA 363
>gb|EOY21752.1| Integrase, catalytic region, Zinc finger, CCHC-type, Peptidase
aspartic, catalytic, putative [Theobroma cacao]
Length = 1037
Score = 62.4 bits (150), Expect(2) = 1e-13
Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = -2
Query: 446 QIFHLHIKSAFLHGEILEDIYMK*LDGFVQNSNKF---CKLRKALDGLKHVPRAWYEKLE 276
++F +++KSAFL+G I E++Y++ GF ++ KF KL KAL GLK PRAWYE+L
Sbjct: 444 KLFQMNVKSAFLNGLIQEEVYIEQSPGF-EDFEKFDHVFKLHKALYGLKQAPRAWYERLS 502
Query: 275 KHLLQKGLTKSGAD 234
K L++K + D
Sbjct: 503 KFLVEKRYDRGNID 516
Score = 39.3 bits (90), Expect(2) = 1e-13
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = -3
Query: 220 QEAHIRKLHQTFKLNKDRGRKTPLNLGYNILKDDENKE-DVKKFMSLIGSLIYLIYTRPD 44
QE + + + F + K + P++ + D++ K+ + K + +I L+YLI +RPD
Sbjct: 556 QERYTHDMLKKFDMLKLKSISAPMSPSTKLDLDEKGKDVNQKLYRGMIDFLLYLIASRPD 615
Query: 43 IHFIVCYLSRY 11
I F VC +R+
Sbjct: 616 IQFSVCLCARF 626
>emb|CAN63196.1| hypothetical protein VITISV_035792 [Vitis vinifera]
Length = 1179
Score = 58.9 bits (141), Expect(2) = 4e-13
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Frame = -2
Query: 434 LHIKSAFLHGEILEDIYMK*LDGFVQNS--NKFCKLRKALDGLKHVPRAWYEKLEKHLLQ 261
L +K+AFLHG++ D+YM +GF+ N CKLRK+L GLK PR WY+K + + +
Sbjct: 873 LDVKTAFLHGDLEXDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHR 932
Query: 260 KGLTK-SGAD 234
G + G+D
Sbjct: 933 IGFKRCEGSD 942
Score = 41.2 bits (95), Expect(2) = 4e-13
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Frame = -3
Query: 232 LMLHQEAHIRKLHQTFKLNKDRGRKTPLNLGYNILKDDENKEDVKK-------FMSLIGS 74
L L +++K+ F +N+ + TPL + + K+ K + ++ + S IGS
Sbjct: 982 LKLSXSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGS 1041
Query: 73 LIY-LIYTRPDIHFIVCYLSRYM 8
L+Y ++ TRPDI V +SR+M
Sbjct: 1042 LMYDMVCTRPDIAHAVGVVSRFM 1064
>gb|AAL79695.1|AC087599_14 putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|31433560|gb|AAP55058.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1168
Score = 54.3 bits (129), Expect(2) = 5e-13
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = -2
Query: 443 IFHLHIKSAFLHGEILEDIYMK*LDGFV--QNSNKFCKLRKALDGLKHVPRAWYEKLEKH 270
+ H+ +KSAFL+G++ E++Y+ GFV K +L KAL GL+ PRAW KL+
Sbjct: 853 VHHMDVKSAFLNGDLKEEVYVHQPPGFVIPGKEGKVLRLHKALYGLRQAPRAWNAKLDST 912
Query: 269 LLQKGLTKS 243
L G +S
Sbjct: 913 LKGMGFEQS 921
Score = 45.4 bits (106), Expect(2) = 5e-13
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = -3
Query: 232 LMLHQEAHIRKLHQTFKLNKDRGRKTPLNLGYNILKDDENKE-DVKKFMSLIGSLIYLIY 56
+ L Q A+ +++ + L TP+ + +D +E D ++ L+GSL YL +
Sbjct: 960 ITLRQTAYAKRVVELAGLTDCNPALTPMEERLKLSRDSTAEEVDATQYRRLVGSLRYLTH 1019
Query: 55 TRPDIHFIVCYLSRYMK 5
TRPD+ F V Y+SR+M+
Sbjct: 1020 TRPDLAFSVGYVSRFMQ 1036
>emb|CAN69531.1| hypothetical protein VITISV_009937 [Vitis vinifera]
Length = 426
Score = 62.8 bits (151), Expect(2) = 6e-13
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Frame = -2
Query: 443 IFHLHIKSAFLHGEILEDIYMK*LDGFVQNS--NKFCKLRKALDGLKHVPRAWYEKLEKH 270
++ + +KSAFL+G I E++Y++ GF + N KL+KAL GLK PRAWYE+L K
Sbjct: 54 LYQMDVKSAFLNGFINEEVYVEQPPGFQSFNFPNHVFKLKKALYGLKQAPRAWYERLSKF 113
Query: 269 LLQKGLTKSGAD 234
LL+KG D
Sbjct: 114 LLKKGFKMGKID 125
Score = 37.0 bits (84), Expect(2) = 6e-13
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -3
Query: 241 EQILMLHQEAHIRKLHQTFKLNKDRGRKTPLNLGYNILKDDENKE-DVKKFMSLIGSLIY 65
E++ + R L + F + + + KT ++ + KD+++K D + +IGSL+Y
Sbjct: 158 EEVSKCMHTKYRRDLLKRFNMEEAKTMKTSMSSSIKLDKDEKDKSIDSTMYRGMIGSLLY 217
Query: 64 LIYTRPDIHFIVCYLSRY 11
L R DI F V +R+
Sbjct: 218 LTAIRXDIMFNVYLCARF 235
>emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera]
Length = 1102
Score = 61.6 bits (148), Expect(2) = 9e-13
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Frame = -2
Query: 443 IFHLHIKSAFLHGEILEDIYMK*LDGFVQNS--NKFCKLRKALDGLKHVPRAWYEKLEKH 270
I + +KSAFL+G + E+I+++ +GF+ K L+KAL GLK PRAWY +++ H
Sbjct: 708 IHQMDVKSAFLNGYLEEEIFVEQPEGFIVKGMEEKVYLLKKALYGLKQAPRAWYSRIDSH 767
Query: 269 LLQKGLTKS 243
LL G TKS
Sbjct: 768 LLGLGFTKS 776
Score = 37.4 bits (85), Expect(2) = 9e-13
Identities = 26/66 (39%), Positives = 36/66 (54%)
Frame = -3
Query: 205 RKLHQTFKLNKDRGRKTPLNLGYNILKDDENKEDVKKFMSLIGSLIYLIYTRPDIHFIVC 26
+++ F++ D GR T LG K DE + + ++IG L+YL TRPDI V
Sbjct: 816 KEMXDVFEMT-DLGRMT-FFLGMEAAKADE-----RLYRTIIGCLMYLTATRPDIMNAVS 868
Query: 25 YLSRYM 8
LSRYM
Sbjct: 869 LLSRYM 874
>emb|CAN65377.1| hypothetical protein VITISV_014188 [Vitis vinifera]
Length = 738
Score = 61.6 bits (148), Expect(2) = 9e-13
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Frame = -2
Query: 443 IFHLHIKSAFLHGEILEDIYMK*LDGFVQNS--NKFCKLRKALDGLKHVPRAWYEKLEKH 270
I + +KSAFL+G + E+I+++ +GF+ K L+KAL GLK PRAWY +++ H
Sbjct: 376 IHQMDVKSAFLNGYLEEEIFVEQPEGFIVKGMEEKVYLLKKALYGLKQAPRAWYSRIDSH 435
Query: 269 LLQKGLTKS 243
LL G TKS
Sbjct: 436 LLGLGFTKS 444
Score = 37.4 bits (85), Expect(2) = 9e-13
Identities = 26/66 (39%), Positives = 36/66 (54%)
Frame = -3
Query: 205 RKLHQTFKLNKDRGRKTPLNLGYNILKDDENKEDVKKFMSLIGSLIYLIYTRPDIHFIVC 26
+++ F++ D GR T LG K DE + + ++IG L+YL TRPDI V
Sbjct: 484 KEMXDVFEMT-DLGRMT-FFLGMEAAKADE-----RLYRTIIGCLMYLTATRPDIMNAVS 536
Query: 25 YLSRYM 8
LSRYM
Sbjct: 537 LLSRYM 542
>gb|ABA97460.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 786
Score = 62.8 bits (151), Expect(2) = 2e-12
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = -2
Query: 443 IFHLHIKSAFLHGEILEDIYMK*LDGFVQNSN--KFCKLRKALDGLKHVPRAWYEKLEKH 270
+ + +K+AFL+GE+ E+IYM DGFV K CKL K+L GLK P+ W+EK +K
Sbjct: 281 VHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKT 340
Query: 269 LLQKGLTKSGAD 234
L G + AD
Sbjct: 341 LTSAGFAVNEAD 352
Score = 35.0 bits (79), Expect(2) = 2e-12
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = -3
Query: 229 MLHQEAHIRKLHQTFKLNKDRGRKTPLNLGYNILKDDENKEDVKKFMSLIGSLIYLIY-T 53
++++ ++ K+ F + TP + + K+ + ++ +IGSL+YL T
Sbjct: 383 VINKSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLQYSQIIGSLMYLASAT 442
Query: 52 RPDIHFIVCYLSRY 11
RPDI F V LSR+
Sbjct: 443 RPDISFAVSKLSRF 456
>gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1151
Score = 62.8 bits (151), Expect(2) = 4e-12
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = -2
Query: 443 IFHLHIKSAFLHGEILEDIYMK*LDGFVQNSN--KFCKLRKALDGLKHVPRAWYEKLEKH 270
+ + +K+AFL+GE+ E+IYM DGFV K CKL K+L GLK P+ W+EK +K
Sbjct: 769 VHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKT 828
Query: 269 LLQKGLTKSGAD 234
L G + AD
Sbjct: 829 LTSAGFAVNEAD 840
Score = 33.9 bits (76), Expect(2) = 4e-12
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -3
Query: 211 HIRKLHQTFKLNKDRGRKTPLNLGYNILKDDENKEDVKKFMSLIGSLIYLIY-TRPDIHF 35
++ K+ F + TP + + K+ + ++ +IGSL+YL TRPDI F
Sbjct: 873 YVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLTSATRPDISF 932
Query: 34 IVCYLSRY 11
V LSR+
Sbjct: 933 AVSKLSRF 940