BLASTX nr result
ID: Ephedra26_contig00023373
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00023373
(579 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera] 112 7e-23
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 110 2e-22
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] 109 4e-22
emb|CAN65499.1| hypothetical protein VITISV_010671 [Vitis vinifera] 107 2e-21
gb|AGH20675.1| reverse transcriptase, partial [Olimarabidopsis c... 105 6e-21
emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera] 105 6e-21
gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus] 105 8e-21
gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense] 105 8e-21
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 103 3e-20
gb|AGH20669.1| reverse transcriptase, partial [Lepidium sativum] 102 5e-20
gb|AGH20680.1| reverse transcriptase, partial [Raphanus sativus] 102 7e-20
emb|CAN77815.1| hypothetical protein VITISV_023977 [Vitis vinifera] 102 7e-20
ref|XP_002283141.2| PREDICTED: LRR receptor-like serine/threonin... 102 9e-20
emb|CAN62530.1| hypothetical protein VITISV_029281 [Vitis vinifera] 102 9e-20
gb|AGH20677.1| reverse transcriptase, partial [Olimarabidopsis c... 101 1e-19
gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wal... 101 1e-19
gb|AGH20681.1| reverse transcriptase, partial [Raphanus sativus] 101 2e-19
gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halle... 101 2e-19
gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halle... 101 2e-19
gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle... 101 2e-19
>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
Length = 1109
Score = 112 bits (280), Expect = 7e-23
Identities = 66/156 (42%), Positives = 94/156 (60%), Gaps = 18/156 (11%)
Frame = -2
Query: 578 SSNRHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFIN 447
S +HK+ LV+KGY Q +G+ + L AH+ + +Q D+KSAF+N
Sbjct: 736 SIQKHKAQLVAKGYAQQHGVDYDDTFSPIALFETVRTLLALAAHMHWCVYQFDVKSAFLN 795
Query: 446 GELSEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSD 267
GEL EE Y+SQPE F V KE+HVY LKK L+ LK APRAW+S+ID Y + G+ + KSD
Sbjct: 796 GELVEEVYVSQPEGFIVPGKEEHVYRLKKTLFGLKQAPRAWYSKIDSYFVENGFERSKSD 855
Query: 266 HSLYCLKCNNKLGQIN*PSFIL--VK*VYFKKYQMA 165
+LY LK + + + SF++ K KK++M+
Sbjct: 856 PNLY-LKRQDDMIYMGSSSFLINEFKACMKKKFEMS 890
>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
Length = 1430
Score = 110 bits (276), Expect = 2e-22
Identities = 58/124 (46%), Positives = 78/124 (62%), Gaps = 16/124 (12%)
Frame = -2
Query: 578 SSNRHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFIN 447
S +HK+ LV+KGY Q +G+ + L AH+ + +Q D+KSAF+N
Sbjct: 975 SIQKHKARLVAKGYAQQHGVDYDDTFSPVARFETVRTLLALAAHMHWCVYQFDVKSAFLN 1034
Query: 446 GELSEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSD 267
GEL EE Y SQPE F V +KE+HVY LK ALY LK APRAW+S+ID Y + G+ + KS+
Sbjct: 1035 GELVEEVYXSQPEGFIVPDKEEHVYRLKXALYGLKQAPRAWYSKIDSYFVENGFEKSKSE 1094
Query: 266 HSLY 255
+LY
Sbjct: 1095 PNLY 1098
>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
Length = 1472
Score = 109 bits (273), Expect = 4e-22
Identities = 58/124 (46%), Positives = 78/124 (62%), Gaps = 16/124 (12%)
Frame = -2
Query: 578 SSNRHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFIN 447
S +HK+ LV+KGY Q +G+ + L AH+ + +Q D+KSAF+N
Sbjct: 804 SIQKHKARLVAKGYAQQHGVDYDDTFSPVARFETVRTLLALAAHMHWCXYQFDVKSAFLN 863
Query: 446 GELSEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSD 267
GEL EE Y+SQ E F V KE+HVY LKKALY LK APRAW+S+ID Y + G+ + KS+
Sbjct: 864 GELVEEVYVSQXEGFIVPXKEEHVYRLKKALYGLKQAPRAWYSKIDSYFVENGFERSKSE 923
Query: 266 HSLY 255
+LY
Sbjct: 924 PNLY 927
>emb|CAN65499.1| hypothetical protein VITISV_010671 [Vitis vinifera]
Length = 750
Score = 107 bits (267), Expect = 2e-21
Identities = 60/129 (46%), Positives = 78/129 (60%), Gaps = 16/129 (12%)
Frame = -2
Query: 578 SSNRHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFIN 447
S N+HKS LV KGY Q +G+ F L A + ++ +Q D+KSAF+N
Sbjct: 569 SINKHKSRLVVKGYAQMFGVDFSETFAPVGRLDTIRILLALAAQMGWKIYQPDVKSAFLN 628
Query: 446 GELSEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSD 267
G L EE ++ QPE F V KED VY LKKALY LK APRAW+SRI+ YL G+ + +S+
Sbjct: 629 GYLEEEIFVEQPEGFVVKGKEDKVYHLKKALYGLKQAPRAWYSRINAYLLSLGFKKSQSE 688
Query: 266 HSLYCLKCN 240
+LY K N
Sbjct: 689 STLYIRKIN 697
>gb|AGH20675.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
Length = 315
Score = 105 bits (263), Expect = 6e-21
Identities = 55/129 (42%), Positives = 77/129 (59%), Gaps = 16/129 (12%)
Frame = -2
Query: 569 RHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFINGEL 438
RHK+ LV+KGY Q G+ + + A ++ HQMD+KSAF+NGEL
Sbjct: 58 RHKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNVWKIHQMDVKSAFLNGEL 117
Query: 437 SEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSDHSL 258
EE Y+ QP+ + V +ED V L+KALY LK APRAW +RIDKY ++ + +C +H+L
Sbjct: 118 DEEVYIEQPQGYVVKGEEDKVLRLRKALYGLKQAPRAWSTRIDKYFKEKNFIKCPYEHAL 177
Query: 257 YCLKCNNKL 231
Y NN +
Sbjct: 178 YIKTQNNDI 186
>emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera]
Length = 1102
Score = 105 bits (263), Expect = 6e-21
Identities = 61/133 (45%), Positives = 79/133 (59%), Gaps = 17/133 (12%)
Frame = -2
Query: 578 SSNRHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFIN 447
S N+HK+ LV KGY Q +G+ F L A + HQMD+KSAF+N
Sbjct: 660 SINKHKARLVVKGYAQMFGVDFSETFAPVARLDTIRMLLALAAQKGWNIHQMDVKSAFLN 719
Query: 446 GELSEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSD 267
G L EE ++ QPE F V E+ VY+LKKALY LK APRAW+SRID +L G+T+ S+
Sbjct: 720 GYLEEEIFVEQPEGFIVKGMEEKVYLLKKALYGLKQAPRAWYSRIDSHLLGLGFTKSLSE 779
Query: 266 HSLYCLK-CNNKL 231
+LY K C+ L
Sbjct: 780 FTLYFRKVCDETL 792
>gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]
Length = 315
Score = 105 bits (262), Expect = 8e-21
Identities = 55/129 (42%), Positives = 77/129 (59%), Gaps = 16/129 (12%)
Frame = -2
Query: 569 RHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFINGEL 438
R+K+ LV+KGY Q G+ + + A + HQMD+KSAF+NG+L
Sbjct: 58 RYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKSAFLNGDL 117
Query: 437 SEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSDHSL 258
EE Y+ QP+ + V +ED V LKKALY LK APRAW +RIDKY ++G+ +C +H+L
Sbjct: 118 EEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFNEKGFIKCPYEHAL 177
Query: 257 YCLKCNNKL 231
Y NN +
Sbjct: 178 YIKTQNNDI 186
>gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense]
Length = 315
Score = 105 bits (262), Expect = 8e-21
Identities = 55/129 (42%), Positives = 77/129 (59%), Gaps = 16/129 (12%)
Frame = -2
Query: 569 RHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFINGEL 438
R+K+ LV+KGY Q G+ + + A ++ HQMD+KSAF+NG+L
Sbjct: 58 RYKARLVAKGYSQSAGIDYDEVFAPVARLETVRLIISLAAQNRWRIHQMDVKSAFLNGDL 117
Query: 437 SEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSDHSL 258
EE Y+ QP+ + V KED V LKKALY LK APRAW +RIDKY ++ + +C +H+L
Sbjct: 118 EEEVYIEQPQGYIVKGKEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKSFIKCPYEHAL 177
Query: 257 YCLKCNNKL 231
Y NN +
Sbjct: 178 YIKTQNNNI 186
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 103 bits (257), Expect = 3e-20
Identities = 53/121 (43%), Positives = 76/121 (62%), Gaps = 16/121 (13%)
Frame = -2
Query: 569 RHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFINGEL 438
R+K+ LV+KGYIQ G+ + + A +++ HQMD+KSAF+NG+L
Sbjct: 897 RYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDL 956
Query: 437 SEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSDHSL 258
EE Y+ QP+ + V +ED V LKKALY LK APRAW +RIDKY ++ + +C +H+L
Sbjct: 957 EEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHAL 1016
Query: 257 Y 255
Y
Sbjct: 1017 Y 1017
>gb|AGH20669.1| reverse transcriptase, partial [Lepidium sativum]
Length = 315
Score = 102 bits (255), Expect = 5e-20
Identities = 53/129 (41%), Positives = 78/129 (60%), Gaps = 16/129 (12%)
Frame = -2
Query: 569 RHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFINGEL 438
R+K+ LV+KGY Q G+ + + A ++ HQMD+KSAF+NG+L
Sbjct: 58 RYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWRIHQMDVKSAFLNGDL 117
Query: 437 SEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSDHSL 258
+EE Y+ QP+ F + +ED V LKKALY LK APRAW +RI+KY ++ + +C +H+L
Sbjct: 118 NEEVYIEQPQGFIIKGEEDKVLRLKKALYGLKQAPRAWNTRIEKYFKEKDFIKCPYEHAL 177
Query: 257 YCLKCNNKL 231
Y NN +
Sbjct: 178 YIKTQNNDI 186
>gb|AGH20680.1| reverse transcriptase, partial [Raphanus sativus]
Length = 315
Score = 102 bits (254), Expect = 7e-20
Identities = 54/129 (41%), Positives = 76/129 (58%), Gaps = 16/129 (12%)
Frame = -2
Query: 569 RHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFINGEL 438
R+K+ LV+KGY Q G+ + + A + HQMD+KSAF+NG+L
Sbjct: 58 RYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKSAFLNGDL 117
Query: 437 SEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSDHSL 258
EE Y+ QP+ + V +ED V LKKAL LK APRAW +RIDKY ++G+ +C +H+L
Sbjct: 118 EEEVYIEQPQGYIVKGEEDKVLRLKKALNGLKQAPRAWNTRIDKYFKEKGFIKCPYEHAL 177
Query: 257 YCLKCNNKL 231
Y NN +
Sbjct: 178 YIKTQNNDI 186
>emb|CAN77815.1| hypothetical protein VITISV_023977 [Vitis vinifera]
Length = 1120
Score = 102 bits (254), Expect = 7e-20
Identities = 55/124 (44%), Positives = 78/124 (62%), Gaps = 16/124 (12%)
Frame = -2
Query: 578 SSNRHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFIN 447
S N++K+ LV KGY Q +G+ F L TA ++ +Q+D+K AF+N
Sbjct: 688 SVNKYKARLVVKGYSQVFGVDFSEXFAPVARLDTIRMLLALTAQKGWKTYQLDVKXAFLN 747
Query: 446 GELSEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSD 267
G L EE Y+ QPE F+V +E+ VY+LKKALY LK APRAW+SRID++L G+ + S+
Sbjct: 748 GYLQEEIYVEQPEGFQVKGQEEKVYLLKKALYGLKQAPRAWYSRIDEHLQSLGFVKSPSE 807
Query: 266 HSLY 255
+LY
Sbjct: 808 ATLY 811
>ref|XP_002283141.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
GSO1-like [Vitis vinifera]
Length = 1464
Score = 102 bits (253), Expect = 9e-20
Identities = 54/124 (43%), Positives = 77/124 (62%), Gaps = 16/124 (12%)
Frame = -2
Query: 578 SSNRHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFIN 447
S N++K+ LV KGY Q +G+ F L T ++ +Q+D+KS F+N
Sbjct: 77 SVNKYKARLVVKGYSQVFGVDFSKTFAPVACLDTIRMLLALTTQKGWKTYQLDVKSVFLN 136
Query: 446 GELSEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSD 267
G L EE Y+ QPE F+V +E+ VY+LKKALY LK APRAW+SRID++L G+ + S+
Sbjct: 137 GYLQEEIYVEQPEGFQVKGQEEKVYLLKKALYGLKQAPRAWYSRIDEHLQSHGFVKSPSE 196
Query: 266 HSLY 255
+LY
Sbjct: 197 ATLY 200
>emb|CAN62530.1| hypothetical protein VITISV_029281 [Vitis vinifera]
Length = 646
Score = 102 bits (253), Expect = 9e-20
Identities = 55/129 (42%), Positives = 78/129 (60%), Gaps = 16/129 (12%)
Frame = -2
Query: 578 SSNRHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFIN 447
S N+HK+ LV KGY Q +G+ F L ++ +++D+KSAF+N
Sbjct: 419 SVNKHKARLVVKGYAQMFGMNFSETFALVARLDTIRMLLALPTQKGWKIYRLDVKSAFLN 478
Query: 446 GELSEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSD 267
G L EE ++ QPEEF V KED VY L+KALY LK APRAW++RI+ +L G+ + +S+
Sbjct: 479 GYLEEEIFVEQPEEFAVKGKEDKVYQLRKALYGLKQAPRAWYNRINAHLLGLGFKKSQSE 538
Query: 266 HSLYCLKCN 240
+LY K N
Sbjct: 539 STLYIRKIN 547
>gb|AGH20677.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
Length = 286
Score = 101 bits (252), Expect = 1e-19
Identities = 51/121 (42%), Positives = 75/121 (61%), Gaps = 16/121 (13%)
Frame = -2
Query: 569 RHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFINGEL 438
R+K+ LV+KGY Q G+ + + A +++ HQMD+KSAF+NG+L
Sbjct: 58 RYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNEWKIHQMDVKSAFLNGDL 117
Query: 437 SEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSDHSL 258
EE Y+ QP+ + + +ED V LKKALY LK APRAW +RIDKY ++ + +C +H+L
Sbjct: 118 EEEVYIEQPQGYIIKGEEDKVLKLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHAL 177
Query: 257 Y 255
Y
Sbjct: 178 Y 178
>gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wallichii]
Length = 315
Score = 101 bits (252), Expect = 1e-19
Identities = 54/129 (41%), Positives = 77/129 (59%), Gaps = 16/129 (12%)
Frame = -2
Query: 569 RHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFINGEL 438
R+K+ LV+KGY Q G+ + + A +++ HQMD+KSAF+NG+L
Sbjct: 58 RYKARLVAKGYSQKAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDL 117
Query: 437 SEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSDHSL 258
EE Y+ QP+ + V +ED V LKK LY LK APRAW +RIDKY ++ + +C +H+L
Sbjct: 118 EEEVYIEQPQGYIVKGEEDKVLRLKKTLYGLKQAPRAWNTRIDKYFKEKKFIKCPYEHAL 177
Query: 257 YCLKCNNKL 231
Y NN L
Sbjct: 178 YIKIQNNDL 186
>gb|AGH20681.1| reverse transcriptase, partial [Raphanus sativus]
Length = 315
Score = 101 bits (251), Expect = 2e-19
Identities = 53/129 (41%), Positives = 76/129 (58%), Gaps = 16/129 (12%)
Frame = -2
Query: 569 RHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFINGEL 438
R+K+ LV+KGY Q G+ + + A ++ HQMD+KSAF+NG+L
Sbjct: 58 RYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWKIHQMDVKSAFLNGDL 117
Query: 437 SEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSDHSL 258
EE Y+ QP+ + V +ED V LKKALY LK APRAW +RI+KY + + +C +H+L
Sbjct: 118 EEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRINKYFKDKSFIKCPYEHAL 177
Query: 257 YCLKCNNKL 231
Y NN +
Sbjct: 178 YIKTQNNDI 186
>gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 101 bits (251), Expect = 2e-19
Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 16/121 (13%)
Frame = -2
Query: 569 RHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFINGEL 438
R+K LV+KGY Q G+ + + A +++ HQMD+KSAF+NG+L
Sbjct: 58 RYKGRLVAKGYCQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDL 117
Query: 437 SEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSDHSL 258
EE Y+ QP+ + V +ED V LKKALY LK APRAW +RIDKY ++ + +C +H+L
Sbjct: 118 EEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHAL 177
Query: 257 Y 255
Y
Sbjct: 178 Y 178
>gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 101 bits (251), Expect = 2e-19
Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 16/121 (13%)
Frame = -2
Query: 569 RHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFINGEL 438
R+K LV+KGY Q G+ + + A +++ HQMD+KSAF+NG+L
Sbjct: 58 RYKGRLVAKGYCQRAGIDYDEVFAPIARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDL 117
Query: 437 SEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSDHSL 258
EE Y+ QP+ + V +ED V LKKALY LK APRAW +RIDKY ++ + +C +H+L
Sbjct: 118 EEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHAL 177
Query: 257 Y 255
Y
Sbjct: 178 Y 178
>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 101 bits (251), Expect = 2e-19
Identities = 52/121 (42%), Positives = 75/121 (61%), Gaps = 16/121 (13%)
Frame = -2
Query: 569 RHKS*LVSKGYIQ*YGLAF----------------LGFTAHVQFEFHQMDIKSAFINGEL 438
R+K+ LV+KGY Q G+ + + A +++ HQMD+KSAF+NG+L
Sbjct: 58 RYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDL 117
Query: 437 SEEAYLSQPEEFKVTEKEDHVYVLKKALYDLK*APRAWFSRIDKYLPKRGYTQCKSDHSL 258
EE Y+ QP+ + V +ED V LKKALY LK APRAW +RIDKY ++ + +C +H+L
Sbjct: 118 EEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHAL 177
Query: 257 Y 255
Y
Sbjct: 178 Y 178