BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00023332
         (516 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006845699.1| hypothetical protein AMTR_s00019p00238660 [A...   166   2e-39
ref|XP_006473716.1| PREDICTED: pentatricopeptide repeat-containi...   150   2e-34
ref|XP_006435257.1| hypothetical protein CICLE_v10000789mg [Citr...   150   2e-34
ref|XP_002523825.1| pentatricopeptide repeat-containing protein,...   149   4e-34
ref|XP_006581146.1| PREDICTED: pentatricopeptide repeat-containi...   147   1e-33
ref|XP_003603831.1| Pentatricopeptide repeat-containing protein ...   147   1e-33
ref|XP_004500913.1| PREDICTED: pentatricopeptide repeat-containi...   147   2e-33
ref|XP_004292931.1| PREDICTED: pentatricopeptide repeat-containi...   145   5e-33
gb|ESW08118.1| hypothetical protein PHAVU_009G019800g [Phaseolus...   144   2e-32
gb|EOY15135.1| Pentatricopeptide repeat (PPR) superfamily protei...   141   8e-32
ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Popu...   140   2e-31
ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containi...   139   3e-31
gb|EXB81505.1| hypothetical protein L484_014313 [Morus notabilis]     139   4e-31
emb|CBI18917.3| unnamed protein product [Vitis vinifera]              138   9e-31
ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containi...   138   9e-31
ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Caps...   137   1e-30
ref|NP_564110.1| pentatricopeptide repeat-containing protein [Ar...   137   1e-30
emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]   137   1e-30
ref|XP_002890377.1| pentatricopeptide repeat-containing protein ...   136   2e-30
ref|XP_004238390.1| PREDICTED: pentatricopeptide repeat-containi...   135   4e-30

>ref|XP_006845699.1| hypothetical protein AMTR_s00019p00238660 [Amborella trichopoda]
           gi|548848271|gb|ERN07374.1| hypothetical protein
           AMTR_s00019p00238660 [Amborella trichopoda]
          Length = 534

 Score =  166 bits (421), Expect = 2e-39
 Identities = 78/171 (45%), Positives = 117/171 (68%)
 Frame = +3

Query: 3   RPNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFK 182
           +PN  +YT +I  LC  G+V  A+++F EM+ ANC PN  T NA +R+ VK  E+ +  +
Sbjct: 284 QPNVYTYTIVIDALCRAGQVNRAYDMFREMVNANCAPNAATFNALMRIHVKANEIEKVSQ 343

Query: 183 VVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTA 362
           V +Q K+ G  PDV  Y  LI+  C+       +K L++MI +G  PN S+FN +F+  +
Sbjct: 344 VYNQMKRMGCDPDVIAYNFLIEAHCRDDNLDKGLKVLNQMISKGCNPNASSFNLLFQCIS 403

Query: 363 HLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
            L DV GA+RLF+RM++ GC P+T TYN+LMR+F+++KSTDMV++L++EMD
Sbjct: 404 KLKDVNGAHRLFSRMKDLGCQPNTITYNILMRMFSESKSTDMVIKLKKEMD 454



 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 42/170 (24%), Positives = 86/170 (50%)
 Frame = +3

Query: 3   RPNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFK 182
           +P+S ++T ++  LC + + ++A + F   L     P++ T    +    +   + EA +
Sbjct: 215 KPDSIAFTIVLSVLCKKRRAQEAQSFFSS-LRDRFPPDLVTYTTLMYGWCRVYNIEEAER 273

Query: 183 VVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTA 362
           V  + K+ G  P+V TY ++I   C+ G+   A     EM+     PN + FN +  +  
Sbjct: 274 VFKEMKENGFQPNVYTYTIVIDALCRAGQVNRAYDMFREMVNANCAPNAATFNALMRIHV 333

Query: 363 HLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEM 512
             N+++   +++N+M+  GCDPD   YN L+    ++ + D  +++  +M
Sbjct: 334 KANEIEKVSQVYNQMKRMGCDPDVIAYNFLIEAHCRDDNLDKGLKVLNQM 383



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 1/151 (0%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           P+  +Y  LI+  C +  +     V  +M+   C PN  + N   + + K ++V  A ++
Sbjct: 355 PDVIAYNFLIEAHCRDDNLDKGLKVLNQMISKGCNPNASSFNLLFQCISKLKDVNGAHRL 414

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAH 365
            S+ K  G  P+  TY +L++   +       +K   EM   G  PN + +  +      
Sbjct: 415 FSRMKDLGCQPNTITYNILMRMFSESKSTDMVIKLKKEMDKNGCEPNVNTYRVLISTFCG 474

Query: 366 LNDVKGAYRLFNRMENSGC-DPDTQTYNVLM 455
           +      Y+ F  M    C  P    Y +L+
Sbjct: 475 IGHWNQGYKFFKEMMEEKCLRPTLPVYKMLL 505


>ref|XP_006473716.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Citrus sinensis]
          Length = 538

 Score =  150 bits (378), Expect = 2e-34
 Identities = 74/171 (43%), Positives = 109/171 (63%)
 Frame = +3

Query: 3   RPNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFK 182
           +PN  +Y+ +I  LC  G++  A +VF EML   C PN  T N  +RV VK     +  +
Sbjct: 288 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 347

Query: 183 VVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTA 362
           V +Q K+ G   D  TY  LI   CK GK +DA+K L+ M+ +G  PN S FN IF   +
Sbjct: 348 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 407

Query: 363 HLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
            L DV GA+R++ +M++  C+P+T TYN+LM++FA +KSTDMV++L++EM+
Sbjct: 408 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 458



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 43/169 (25%), Positives = 82/169 (48%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           P+  +++ +I  LC + +  +A + F + L     P+V      VR   +   + EA +V
Sbjct: 220 PDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERV 278

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAH 365
             + K  G+ P+V TY ++I   C+ G+   A     EM+  G  PN   FN++  V   
Sbjct: 279 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 338

Query: 366 LNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEM 512
            +  +   +++N+M+  GC+ DT TYN L+    ++   +  +++   M
Sbjct: 339 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 387



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           PN+ ++  + + +   G V  A  ++ +M    C PN  T N  +++   ++      K+
Sbjct: 394 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 453

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMI-GRGLTPNPSAFNHIFEVTA 362
             + ++  + P+V TY +LI   C +G W +A K + EMI  + L P  S +  + +   
Sbjct: 454 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 513

Query: 363 HLNDVKGAYRLFNRMENSG 419
               ++    L  +M + G
Sbjct: 514 RAGQLQKHEELVEKMVDRG 532



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 1/148 (0%)
 Frame = +3

Query: 18  SYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQF 197
           +Y  LI   C +GK++DA  V   M+   C PN  T N   R + K  +V  A ++  + 
Sbjct: 363 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 422

Query: 198 KQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDV 377
           K     P+  TY +L+Q           +K   EM    + PN + +  +  +   +   
Sbjct: 423 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 482

Query: 378 KGAYRLFNRMENSGC-DPDTQTYNVLMR 458
             AY+    M    C  P +  Y ++++
Sbjct: 483 NNAYKYIREMIEEKCLKPGSSVYEMVLQ 510


>ref|XP_006435257.1| hypothetical protein CICLE_v10000789mg [Citrus clementina]
           gi|557537379|gb|ESR48497.1| hypothetical protein
           CICLE_v10000789mg [Citrus clementina]
          Length = 541

 Score =  150 bits (378), Expect = 2e-34
 Identities = 74/171 (43%), Positives = 109/171 (63%)
 Frame = +3

Query: 3   RPNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFK 182
           +PN  +Y+ +I  LC  G++  A +VF EML   C PN  T N  +RV VK     +  +
Sbjct: 291 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 350

Query: 183 VVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTA 362
           V +Q K+ G   D  TY  LI   CK GK +DA+K L+ M+ +G  PN S FN IF   +
Sbjct: 351 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 410

Query: 363 HLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
            L DV GA+R++ +M++  C+P+T TYN+LM++FA +KSTDMV++L++EM+
Sbjct: 411 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 461



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 43/169 (25%), Positives = 82/169 (48%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           P+  +++ +I  LC + +  +A + F + L     P+V      VR   +   + EA +V
Sbjct: 223 PDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERV 281

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAH 365
             + K  G+ P+V TY ++I   C+ G+   A     EM+  G  PN   FN++  V   
Sbjct: 282 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 341

Query: 366 LNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEM 512
            +  +   +++N+M+  GC+ DT TYN L+    ++   +  +++   M
Sbjct: 342 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 390



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           PN+ ++  + + +   G V  A  ++ +M    C PN  T N  +++   ++      K+
Sbjct: 397 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 456

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMI-GRGLTPNPSAFNHIFEVTA 362
             + ++  + P+V TY +LI   C +G W +A K + EMI  + L P  S +  + +   
Sbjct: 457 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 516

Query: 363 HLNDVKGAYRLFNRMENSG 419
               ++    L  +M + G
Sbjct: 517 RAGQLQKHEELVEKMVDRG 535



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 1/148 (0%)
 Frame = +3

Query: 18  SYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQF 197
           +Y  LI   C +GK++DA  V   M+   C PN  T N   R + K  +V  A ++  + 
Sbjct: 366 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 425

Query: 198 KQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDV 377
           K     P+  TY +L+Q           +K   EM    + PN + +  +  +   +   
Sbjct: 426 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 485

Query: 378 KGAYRLFNRMENSGC-DPDTQTYNVLMR 458
             AY+    M    C  P +  Y ++++
Sbjct: 486 NNAYKYIREMIEEKCLKPGSSVYEMVLQ 513


>ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536913|gb|EEF38551.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 528

 Score =  149 bits (376), Expect = 4e-34
 Identities = 75/170 (44%), Positives = 104/170 (61%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           PN  +YT +I  LC  G++  A +VF EML   C PN  T N  +RV VK     +  +V
Sbjct: 279 PNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQV 338

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAH 365
            +Q K+ G  PD  TY  LI+  CK G   +A+K L+ M+ +G +PN S FN +F   A 
Sbjct: 339 YNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAK 398

Query: 366 LNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
           L DV GA+RL+ +M+   C  +T TYN+LMR+F   KSTDMV++L++EMD
Sbjct: 399 LRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMD 448



 Score = 81.6 bits (200), Expect = 9e-14
 Identities = 47/170 (27%), Positives = 84/170 (49%)
 Frame = +3

Query: 3   RPNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFK 182
           +P+  +++ LI  LC + +  +A + F + L     P+V      VR   +   + EA +
Sbjct: 209 KPDKIAFSILISILCRKRRATEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIPEAER 267

Query: 183 VVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTA 362
           V ++ K  G MP+V TY ++I   C+ G+   A     EM+  G  PN   FN++  V  
Sbjct: 268 VFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHV 327

Query: 363 HLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEM 512
                +   +++N+M+  GC PDT TYN L+    ++ + D  +++   M
Sbjct: 328 KAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSM 377


>ref|XP_006581146.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like isoform X1 [Glycine max]
           gi|571458531|ref|XP_006581147.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like isoform X2 [Glycine max]
          Length = 564

 Score =  147 bits (372), Expect = 1e-33
 Identities = 71/171 (41%), Positives = 110/171 (64%)
 Frame = +3

Query: 3   RPNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFK 182
           +PN  +Y+ +I  LC  G++  A +VF EM+ A C PN  T N+ +RV VK     +  K
Sbjct: 314 KPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLK 373

Query: 183 VVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTA 362
           V +Q K+ G   D  +Y  +I+  C+    ++A K L+ M+ +G+ PN S FN IF   A
Sbjct: 374 VYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIA 433

Query: 363 HLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
            L+DV GA+R++ RM+   C P+T TYN+LMR+FA+++STDMV+++++EMD
Sbjct: 434 KLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMD 484



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           PN+ ++  +   +     V  A  ++  M   NC PN  T N  +R+  ++       K+
Sbjct: 420 PNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKM 479

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMI-GRGLTPNPSAFNHIFEVTA 362
             +  +  + P+V TY +LI   C +  W +A K + EM+  + L PN S +  + E+  
Sbjct: 480 KKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLR 539

Query: 363 HLNDVKGAYRLFNRMENSG 419
               +K    L ++M   G
Sbjct: 540 KAGQLKKHEELVDKMVARG 558


>ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355492879|gb|AES74082.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 530

 Score =  147 bits (372), Expect = 1e-33
 Identities = 73/171 (42%), Positives = 108/171 (63%)
 Frame = +3

Query: 3   RPNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFK 182
           +PN  +Y+ +I  LC  G++  A +VF EM+ A C PN  T N+ +RV VK     +  +
Sbjct: 279 KPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQ 338

Query: 183 VVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTA 362
           V +Q K+ G   D  +Y  LI+  CK     +A+K LD M+ +G+ PN S FN IF   A
Sbjct: 339 VYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIA 398

Query: 363 HLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
            L+DV GA+R++ +M+   C P+T TYN+LMR+FA +KS DMV++L++EMD
Sbjct: 399 ELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMD 449



 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 44/170 (25%), Positives = 84/170 (49%)
 Frame = +3

Query: 3   RPNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFK 182
           +P+  S++ +I  LC + +  +A  +F + L     P+V    + V    +  ++ +A +
Sbjct: 210 KPDKVSFSIVISSLCKKRRASEA-ELFFDSLKHKFEPDVIVYTSLVHGWCRAGDIAKAEE 268

Query: 183 VVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTA 362
           V S  K+ G+ P+V TY ++I   C+ G+   A     EMI  G  PN   FN +  V  
Sbjct: 269 VFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHV 328

Query: 363 HLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEM 512
                +   +++N+M+  GC  DT +YN L+    ++++ D  +++   M
Sbjct: 329 KAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTM 378



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           PN+ ++  +   +     V  A  ++ +M    C+PN  T N  +R+   ++ +    K+
Sbjct: 385 PNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKL 444

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMI-GRGLTPNPSAFNHIFEVTA 362
             +  +  + P+V TY +LI   C+ G W +A   + EM+  + L PN S +  + E+  
Sbjct: 445 KKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYETVLELLR 504

Query: 363 HLNDVKGAYRLFNRMENSG 419
           +   +K    L  +M   G
Sbjct: 505 NAGQLKKHEELVEKMVARG 523


>ref|XP_004500913.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Cicer arietinum]
          Length = 530

 Score =  147 bits (370), Expect = 2e-33
 Identities = 71/171 (41%), Positives = 107/171 (62%)
 Frame = +3

Query: 3   RPNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFK 182
           +PN  +Y+ +I  LC  G++  A +VF EM+ A C PN  T N+ +RV VK     +  +
Sbjct: 280 KPNVYTYSIVIDSLCRSGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQ 339

Query: 183 VVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTA 362
           V +Q K+ G   D  +Y  +I+  CK     +A+K LD M+ +G+ PN S FN IF   A
Sbjct: 340 VYNQMKRLGCAADTISYNFIIESHCKDENLDEAVKVLDTMVKKGVDPNASTFNSIFGCIA 399

Query: 363 HLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
            L+DV GA+R++ +M+   C P+T TYN+LMR+F  +KS DMV++L++EMD
Sbjct: 400 ELHDVNGAHRMYAKMKELKCRPNTLTYNILMRMFVDSKSIDMVLKLKKEMD 450



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 42/169 (24%), Positives = 81/169 (47%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           P+  +++ +I  LC + +  +A  +F + L     P+V    + V    +   + +A +V
Sbjct: 212 PDKVAFSIVISSLCKKRRASEA-QLFFDSLKHRFEPDVIVYTSLVHGWCRAGNISKAEEV 270

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAH 365
            S  K  G+ P+V TY ++I   C+ G+   A     EMI  G  PN   FN +  V   
Sbjct: 271 FSDMKVAGIKPNVYTYSIVIDSLCRSGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVK 330

Query: 366 LNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEM 512
               +   +++N+M+  GC  DT +YN ++    ++++ D  +++   M
Sbjct: 331 AGRTEKVLQVYNQMKRLGCAADTISYNFIIESHCKDENLDEAVKVLDTM 379



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           PN+ ++  +   +     V  A  ++ +M    C PN  T N  +R+ V ++ +    K+
Sbjct: 386 PNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCRPNTLTYNILMRMFVDSKSIDMVLKL 445

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMI-GRGLTPNPSAFNHIFEVTA 362
             +  +  + P+V TY +LI   C+ G W +A K + EM+  + L PN S +  + E   
Sbjct: 446 KKEMDESQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKCLKPNLSIYEMVLEQLR 505

Query: 363 HLNDVKGAYRLFNRMENSG 419
               +K    L  +M   G
Sbjct: 506 KAGQLKKHEELVEKMVARG 524


>ref|XP_004292931.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 529

 Score =  145 bits (366), Expect = 5e-33
 Identities = 75/170 (44%), Positives = 108/170 (63%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           PN  SY+ +I  LC  G++  A +VF EM+ A C PN  T N  +RV VK     +  +V
Sbjct: 278 PNVYSYSIVIDALCRCGQITRAHDVFAEMIDAGCNPNSITFNNLMRVHVKAGRTEKVLQV 337

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAH 365
            +Q K+ G   DV TY  LI+  CK    ++A K L+ M+ +G +PN S FN IF   A 
Sbjct: 338 YNQMKRLGCNADVITYNFLIECHCKDENVEEAAKVLNLMVKKGCSPNASTFNPIFRCIAK 397

Query: 366 LNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
           L DV GA+R++ +M++  C  +T TYNVLM++FA++KSTDMV++L++EMD
Sbjct: 398 LKDVNGAHRMYTKMKDLDCKANTVTYNVLMQMFAESKSTDMVLKLKKEMD 447



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 39/166 (23%), Positives = 78/166 (46%)
 Frame = +3

Query: 15  ESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQ 194
           E+++ L++     G   +A + F  M      P+    +  + +L K     EA      
Sbjct: 177 ETFSILVRRYVRAGLAAEAVHAFNRMEEYGVSPDRIAFSVVIGILCKKRRASEAQAFFDS 236

Query: 195 FKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLND 374
            K +    DV  Y  L+ G C+ G   +A +  +EM   G+ PN  +++ + +       
Sbjct: 237 LKHK-FEADVILYTSLVNGWCRAGNIAEAERVFNEMKAAGIEPNVYSYSIVIDALCRCGQ 295

Query: 375 VKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEM 512
           +  A+ +F  M ++GC+P++ T+N LMR+  +   T+ V+++  +M
Sbjct: 296 ITRAHDVFAEMIDAGCNPNSITFNNLMRVHVKAGRTEKVLQVYNQM 341


>gb|ESW08118.1| hypothetical protein PHAVU_009G019800g [Phaseolus vulgaris]
          Length = 530

 Score =  144 bits (362), Expect = 2e-32
 Identities = 69/171 (40%), Positives = 110/171 (64%)
 Frame = +3

Query: 3   RPNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFK 182
           +PN  +Y+ +I  LC  G++  A +VF EM+ + C PN  T N+ +RV VK     +  +
Sbjct: 280 KPNVYTYSIVIDSLCRCGQITRAHDVFAEMIDSGCDPNAVTFNSLMRVHVKAGRTEKVLQ 339

Query: 183 VVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTA 362
           V +Q K+ G   D  +Y  +I+  C+     +A+K L+ M+ +G+ PN S FN +F   A
Sbjct: 340 VHNQMKRLGCPADTISYNFIIESHCRDENLDEAVKILNLMVKKGVAPNASTFNCVFGCIA 399

Query: 363 HLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
            L+DV GA+R++ RM+   C P+T TYN+LMR+FA++KSTDMV+++++EMD
Sbjct: 400 KLHDVNGAHRMYARMKELKCQPNTLTYNILMRMFAESKSTDMVLKMKKEMD 450



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 42/165 (25%), Positives = 79/165 (47%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           P+  +++ +I  LC + +  +A + F E L     P+V    + V    +   + +A +V
Sbjct: 212 PDKVAFSIVISSLCKKRRANEAQSFF-ESLKHKFEPDVLVYTSLVYGWCRAGNISKAEEV 270

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAH 365
            S  K  G+ P+V TY ++I   C+ G+   A     EMI  G  PN   FN +  V   
Sbjct: 271 FSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFAEMIDSGCDPNAVTFNSLMRVHVK 330

Query: 366 LNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRL 500
               +   ++ N+M+  GC  DT +YN ++    ++++ D  +++
Sbjct: 331 AGRTEKVLQVHNQMKRLGCPADTISYNFIIESHCRDENLDEAVKI 375



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           PN+ ++ C+   +     V  A  ++  M    C PN  T N  +R+  +++      K+
Sbjct: 386 PNASTFNCVFGCIAKLHDVNGAHRMYARMKELKCQPNTLTYNILMRMFAESKSTDMVLKM 445

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMI-GRGLTPNPSAFNHIFEVTA 362
             +  +  + P+V TY +LI   C++  W +A K + EM+  + L PN S +  + E+  
Sbjct: 446 KKEMDENQVEPNVNTYRILISMFCEMKHWNNAYKLVKEMVEEKCLRPNLSVYETVLELLR 505

Query: 363 HLNDVKGAYRLFNRMENSG 419
           +   +K    L ++M   G
Sbjct: 506 NAGQLKKHEELVDKMVARG 524


>gb|EOY15135.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 532

 Score =  141 bits (356), Expect = 8e-32
 Identities = 73/171 (42%), Positives = 104/171 (60%)
 Frame = +3

Query: 3   RPNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFK 182
           +PN  SYT +I  LC  G++  A +VF EM+   C PN  T N  +RV VK     +  +
Sbjct: 282 KPNVYSYTIVIDALCRCGQITRAHDVFAEMIDVGCEPNSITFNNLMRVHVKAGRTEKVLQ 341

Query: 183 VVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTA 362
           V +Q K+ G   D  TY  LI+  C+     +A+K L+ MI +   PNPS FN IF+   
Sbjct: 342 VYNQMKRCGCPADTITYNFLIESHCRDDNLDEAIKVLNLMIKKECIPNPSTFNTIFKCIE 401

Query: 363 HLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
            L DV  A+R++ +M++  C P+T TYN+LMR+FA  KSTDMV++L++EMD
Sbjct: 402 KLQDVNAAHRMYAKMKDLNCRPNTVTYNILMRMFAGAKSTDMVLKLKKEMD 452



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 42/165 (25%), Positives = 81/165 (49%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           P+  +++ +I  LC + + ++A   F + L  N  P+V    + +    +   + EA +V
Sbjct: 214 PDKIAFSIVISSLCKKRRAEEA-QTFFDKLKDNFEPDVILYTSLINGWCRARNISEAERV 272

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAH 365
             + K  G+ P+V +Y ++I   C+ G+   A     EMI  G  PN   FN++  V   
Sbjct: 273 FKEMKMAGIKPNVYSYTIVIDALCRCGQITRAHDVFAEMIDVGCEPNSITFNNLMRVHVK 332

Query: 366 LNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRL 500
               +   +++N+M+  GC  DT TYN L+    ++ + D  +++
Sbjct: 333 AGRTEKVLQVYNQMKRCGCPADTITYNFLIESHCRDDNLDEAIKV 377



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           PN  ++  + K +     V  A  ++ +M   NC PN  T N  +R+    +      K+
Sbjct: 388 PNPSTFNTIFKCIEKLQDVNAAHRMYAKMKDLNCRPNTVTYNILMRMFAGAKSTDMVLKL 447

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMI-GRGLTPNPSAFNHIFEVTA 362
             +  +  + P+V TY +LI   C  G W +A K  +EMI  +GL P+ S +  + E   
Sbjct: 448 KKEMDENEVEPNVNTYRILITMYCGKGHWNNAYKFFNEMIEEKGLKPSMSLYQMVLEQLR 507

Query: 363 HLNDVKGAYRLFNRMENSG 419
               +K    L  +M + G
Sbjct: 508 KAEQLKKHEELVEKMVDRG 526



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
 Frame = +3

Query: 18  SYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQF 197
           +Y  LI+  C +  + +A  V   M+   CIPN  T N   + + K ++V  A ++ ++ 
Sbjct: 357 TYNFLIESHCRDDNLDEAIKVLNLMIKKECIPNPSTFNTIFKCIEKLQDVNAAHRMYAKM 416

Query: 198 KQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDV 377
           K     P+  TY +L++           +K   EM    + PN + +  +  +       
Sbjct: 417 KDLNCRPNTVTYNILMRMFAGAKSTDMVLKLKKEMDENEVEPNVNTYRILITMYCGKGHW 476

Query: 378 KGAYRLFNRM-ENSGCDPDTQTYNVLM 455
             AY+ FN M E  G  P    Y +++
Sbjct: 477 NNAYKFFNEMIEEKGLKPSMSLYQMVL 503


>ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Populus trichocarpa]
           gi|550339796|gb|EEE94747.2| hypothetical protein
           POPTR_0005s26670g [Populus trichocarpa]
          Length = 533

 Score =  140 bits (353), Expect = 2e-31
 Identities = 69/171 (40%), Positives = 103/171 (60%)
 Frame = +3

Query: 3   RPNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFK 182
           +PN  +Y+ +I  LC  G++  A ++F EML A C PN  T N+ +R+ VK     +  +
Sbjct: 283 KPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQ 342

Query: 183 VVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTA 362
           V +Q K+ G  PD  TY  LI+  CK    +DA+K +  M  +G  PN S FN +F   A
Sbjct: 343 VYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIA 402

Query: 363 HLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
            L DV  A+R++ +M+   C+ +T TYN LM++F  +KSTDMV++L+ EMD
Sbjct: 403 KLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVLKLKTEMD 453



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           PN+ ++  L   +   G V  A  ++ +M   NC  N  T N  +++ V ++      K+
Sbjct: 389 PNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVLKL 448

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIG-RGLTPNPSAFNHIFEVTA 362
            ++  +  + P+V TY++LI   C +G W +A K   EMI  + L P+   ++ + +   
Sbjct: 449 KTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFREMIDEKCLRPSLPVYDMVLQQLR 508

Query: 363 HLNDVKGAYRLFNRMENSG 419
               +K    L  +M + G
Sbjct: 509 KAGQLKKHEELVEKMVDRG 527


>ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Cucumis sativus]
           gi|449519964|ref|XP_004167004.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Cucumis sativus]
          Length = 534

 Score =  139 bits (351), Expect = 3e-31
 Identities = 72/170 (42%), Positives = 101/170 (59%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           PN  +Y+ +I  LC  G++  A +VF EML A C PN  T N  +RV ++     +  +V
Sbjct: 285 PNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQV 344

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAH 365
            +Q K+     D+ TY  LI+  CK     +A+K L+ M     TPN S+FN IF   A 
Sbjct: 345 YNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAK 404

Query: 366 LNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
             DV GA+R+F RM+  GC P+T TYN+LMR+FA  KS DM+ +L++EMD
Sbjct: 405 SQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMD 454


>gb|EXB81505.1| hypothetical protein L484_014313 [Morus notabilis]
          Length = 535

 Score =  139 bits (350), Expect = 4e-31
 Identities = 71/171 (41%), Positives = 103/171 (60%)
 Frame = +3

Query: 3   RPNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFK 182
           +PN  +YT +I  LC  G++    +VF EM+   C PN  T N  +RV VK    ++  +
Sbjct: 285 KPNVYTYTIVIDALCRCGQITRGHDVFSEMIDVGCQPNAVTFNNLMRVHVKAGRTQKVLQ 344

Query: 183 VVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTA 362
           V +Q K+     DV TY  L+   CK     DA K L+ M+ +G  PN S FN IF + A
Sbjct: 345 VFNQMKRLKCEADVITYNFLVDCHCKDENLDDAAKVLNLMVKKGCNPNSSTFNPIFRLVA 404

Query: 363 HLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
            L DV  A+R++ +M+   C P+T TYNVLM++FA++KS DMV++L++EMD
Sbjct: 405 KLKDVNAAHRMYAKMKELKCKPNTVTYNVLMQMFAESKSMDMVLKLKEEMD 455



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 1/147 (0%)
 Frame = +3

Query: 18  SYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQF 197
           +Y  L+   C +  + DA  V   M+   C PN  T N   R++ K ++V  A ++ ++ 
Sbjct: 360 TYNFLVDCHCKDENLDDAAKVLNLMVKKGCNPNSSTFNPIFRLVAKLKDVNAAHRMYAKM 419

Query: 198 KQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDV 377
           K+    P+  TY +L+Q   +       +K  +EM    + PN + +  +  +   +   
Sbjct: 420 KELKCKPNTVTYNVLMQMFAESKSMDMVLKLKEEMDESEVEPNVNTYRVLIVMFCGMGHW 479

Query: 378 KGAYRLFNRMENSGC-DPDTQTYNVLM 455
             AYR F  M    C  P    Y +++
Sbjct: 480 NNAYRFFREMIEEKCLKPSFPVYEMVL 506


>emb|CBI18917.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score =  138 bits (347), Expect = 9e-31
 Identities = 71/171 (41%), Positives = 105/171 (61%)
 Frame = +3

Query: 3   RPNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFK 182
           +PN  +Y+ +I  LC  G++  A +VF EM+   C PN  T N  +RV VK     +  +
Sbjct: 247 QPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQ 306

Query: 183 VVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTA 362
           V +Q K+ G  PD  TY  LI+  C+    ++A+K L+  + +G   N S+FN IF   +
Sbjct: 307 VYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS-VKKGCNLNASSFNPIFGCIS 365

Query: 363 HLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
            L DV  A+R+F +M++  C P+T TYN+LMR+FA  KSTDMV++LR+EMD
Sbjct: 366 KLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMD 416



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 41/166 (24%), Positives = 80/166 (48%)
 Frame = +3

Query: 3   RPNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFK 182
           +P+  +++ +I  L  + +  +A + F + L     P+V    + V    +   + EA +
Sbjct: 178 KPDKIAFSVVISSLSKKRRAIEAQSFF-DSLKDRFEPDVVVYTSLVHGWCRAGNISEAER 236

Query: 183 VVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTA 362
           V  + K  G+ P+V TY ++I   C+ G+   A     EMI  G  PN   FN++  V  
Sbjct: 237 VFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHV 296

Query: 363 HLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRL 500
                +   +++N+M+  GC PD  TYN L+    ++ + +  +++
Sbjct: 297 KAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKI 342



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 41/153 (26%), Positives = 69/153 (45%)
 Frame = +3

Query: 54  GKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTY 233
           G   +A + F  M    C P+    +  +  L K     EA       K R   PDV  Y
Sbjct: 160 GLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVY 218

Query: 234 ELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMEN 413
             L+ G C+ G   +A +   EM   G+ PN   ++ + +       +  A+ +F+ M +
Sbjct: 219 TSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMID 278

Query: 414 SGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEM 512
            GCDP+  T+N LMR+  +   T+ V+++  +M
Sbjct: 279 VGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQM 311



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 1/138 (0%)
 Frame = +3

Query: 9   NSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVV 188
           N+ S+  +   +   G V  A  +F +M    C PN  T N  +R+    +      K+ 
Sbjct: 353 NASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLR 412

Query: 189 SQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMI-GRGLTPNPSAFNHIFEVTAH 365
            +  +  + P+  TY +LI   C +G W +A     EMI  + L P+   +  + +    
Sbjct: 413 KEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRK 472

Query: 366 LNDVKGAYRLFNRMENSG 419
              +K    L  +M N G
Sbjct: 473 AGQLKKHEELVEKMVNRG 490


>ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Vitis vinifera]
          Length = 531

 Score =  138 bits (347), Expect = 9e-31
 Identities = 71/171 (41%), Positives = 105/171 (61%)
 Frame = +3

Query: 3   RPNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFK 182
           +PN  +Y+ +I  LC  G++  A +VF EM+   C PN  T N  +RV VK     +  +
Sbjct: 282 QPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQ 341

Query: 183 VVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTA 362
           V +Q K+ G  PD  TY  LI+  C+    ++A+K L+  + +G   N S+FN IF   +
Sbjct: 342 VYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS-VKKGCNLNASSFNPIFGCIS 400

Query: 363 HLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
            L DV  A+R+F +M++  C P+T TYN+LMR+FA  KSTDMV++LR+EMD
Sbjct: 401 KLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMD 451



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 44/166 (26%), Positives = 76/166 (45%)
 Frame = +3

Query: 15  ESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQ 194
           E++T L++     G   +A + F  M    C P+    +  +  L K     EA      
Sbjct: 182 ETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDS 241

Query: 195 FKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLND 374
            K R   PDV  Y  L+ G C+ G   +A +   EM   G+ PN   ++ + +       
Sbjct: 242 LKDR-FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQ 300

Query: 375 VKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEM 512
           +  A+ +F+ M + GCDP+  T+N LMR+  +   T+ V+++  +M
Sbjct: 301 ITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQM 346



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 41/166 (24%), Positives = 80/166 (48%)
 Frame = +3

Query: 3   RPNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFK 182
           +P+  +++ +I  L  + +  +A + F + L     P+V    + V    +   + EA +
Sbjct: 213 KPDKIAFSVVISSLSKKRRAIEAQSFF-DSLKDRFEPDVVVYTSLVHGWCRAGNISEAER 271

Query: 183 VVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTA 362
           V  + K  G+ P+V TY ++I   C+ G+   A     EMI  G  PN   FN++  V  
Sbjct: 272 VFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHV 331

Query: 363 HLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRL 500
                +   +++N+M+  GC PD  TYN L+    ++ + +  +++
Sbjct: 332 KAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKI 377



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 1/138 (0%)
 Frame = +3

Query: 9   NSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVV 188
           N+ S+  +   +   G V  A  +F +M    C PN  T N  +R+    +      K+ 
Sbjct: 388 NASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLR 447

Query: 189 SQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMI-GRGLTPNPSAFNHIFEVTAH 365
            +  +  + P+  TY +LI   C +G W +A     EMI  + L P+   +  + +    
Sbjct: 448 KEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRK 507

Query: 366 LNDVKGAYRLFNRMENSG 419
              +K    L  +M N G
Sbjct: 508 AGQLKKHEELVEKMVNRG 525


>ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Capsella rubella]
           gi|482574795|gb|EOA38982.1| hypothetical protein
           CARUB_v10011494mg [Capsella rubella]
          Length = 532

 Score =  137 bits (346), Expect = 1e-30
 Identities = 68/170 (40%), Positives = 105/170 (61%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           PN  +Y+ +I  LC  G++  A +VF +ML + C PN  T N  +RV VK     +  +V
Sbjct: 283 PNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQV 342

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAH 365
            +Q K+ G  PD  TY  LI+  C+    ++A+K L+ MI +    N S FN IF     
Sbjct: 343 YNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKNCDVNASTFNTIFRYIEK 402

Query: 366 LNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
             DV GA+R++++M  + C+P+T TYN+LMR+FA +KSTDMV+++++EM+
Sbjct: 403 KRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKEME 452



 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 45/166 (27%), Positives = 79/166 (47%)
 Frame = +3

Query: 15  ESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQ 194
           E++T LIK     G   +A + F  M    C+P+    +  + +L +     EA      
Sbjct: 182 ETFTILIKRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISILSRKRRATEAQSFFDS 241

Query: 195 FKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLND 374
            K R   PDV  Y  L++G C+ G+  +A +   EM   G+ PN   ++ + +       
Sbjct: 242 LKDR-FEPDVIVYTNLVRGWCRAGEISEAERVFKEMKLAGIEPNVYTYSIVIDALCRCGQ 300

Query: 375 VKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEM 512
           +  A+ +F  M +SGC P+  T+N LMR+  +   T+ V+++  +M
Sbjct: 301 ISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQM 346



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
 Frame = +3

Query: 9   NSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVV 188
           N+ ++  + + +  +  V  A  ++ +M+ A C PN  T N  +R+   ++      K+ 
Sbjct: 389 NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMK 448

Query: 189 SQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMI-GRGLTPNPSAFNHIFEVTAH 365
            + + + + P+V TY LL+   C +G W +A K   EM+  + LTP+ S +  +      
Sbjct: 449 KEMEDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLSQLRK 508

Query: 366 LNDVKGAYRLFNRMENSG 419
              +K    L  +M   G
Sbjct: 509 AGQLKKHEELVEKMIQKG 526



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 1/151 (0%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           P++ +Y  LI+  C +  +++A  V   M+  NC  N  T N   R + K  +V  A ++
Sbjct: 353 PDTITYNFLIETHCRDENLENAVKVLNTMIKKNCDVNASTFNTIFRYIEKKRDVNGAHRM 412

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAH 365
            S+  +    P+  TY +L++           +K   EM  + + PN + +  +  +   
Sbjct: 413 YSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKEMEDKEVEPNVNTYRLLVTMFCG 472

Query: 366 LNDVKGAYRLFNRMENSGC-DPDTQTYNVLM 455
           +     AY+LF  M    C  P    Y +++
Sbjct: 473 MGHWNNAYKLFKEMVEEKCLTPSLSLYEMVL 503


>ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g20300, mitochondrial; Flags: Precursor
           gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity
           to a hypothetical protein T3P18.15 gi|5454201 from
           Arabidopsis thaliana BAC T3P18 gb|AC005698 and contains
           multiple PPR PF|01535 repeats [Arabidopsis thaliana]
           gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8
           [Arabidopsis thaliana] gi|15450347|gb|AAK96467.1|
           At1g20300/F14O10_8 [Arabidopsis thaliana]
           gi|332191838|gb|AEE29959.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 537

 Score =  137 bits (346), Expect = 1e-30
 Identities = 68/170 (40%), Positives = 104/170 (61%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           PN  +Y+ +I  LC  G++  A +VF +ML + C PN  T N  +RV VK     +  +V
Sbjct: 288 PNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQV 347

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAH 365
            +Q K+ G  PD  TY  LI+  C+    ++A+K L+ MI +    N S FN IF     
Sbjct: 348 YNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEK 407

Query: 366 LNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
             DV GA+R++++M  + C+P+T TYN+LMR+F  +KSTDMV+++++EMD
Sbjct: 408 KRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMD 457



 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 44/169 (26%), Positives = 84/169 (49%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           P+  +++ +I  L  + +  +A + F + L     P+V      VR   +  E+ EA KV
Sbjct: 219 PDKIAFSIVISNLSRKRRASEAQSFF-DSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKV 277

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAH 365
             + K  G+ P+V TY ++I   C+ G+   A     +M+  G  PN   FN++  V   
Sbjct: 278 FKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVK 337

Query: 366 LNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEM 512
               +   +++N+M+  GC+PDT TYN L+    ++++ +  +++   M
Sbjct: 338 AGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTM 386



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
 Frame = +3

Query: 9   NSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVV 188
           N+ ++  + + +  +  V  A  ++ +M+ A C PN  T N  +R+ V ++      K+ 
Sbjct: 394 NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMK 453

Query: 189 SQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMI-GRGLTPNPSAFNHIFEVTAH 365
            +   + + P+V TY LL+   C +G W +A K   EM+  + LTP+ S +  +      
Sbjct: 454 KEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRR 513

Query: 366 LNDVKGAYRLFNRMENSG 419
              +K    L  +M   G
Sbjct: 514 AGQLKKHEELVEKMIQKG 531



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 1/151 (0%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           P++ +Y  LI+  C +  +++A  V   M+   C  N  T N   R + K  +V  A ++
Sbjct: 358 PDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRM 417

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAH 365
            S+  +    P+  TY +L++           +K   EM  + + PN + +  +  +   
Sbjct: 418 YSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCG 477

Query: 366 LNDVKGAYRLFNRMENSGC-DPDTQTYNVLM 455
           +     AY+LF  M    C  P    Y +++
Sbjct: 478 MGHWNNAYKLFKEMVEEKCLTPSLSLYEMVL 508


>emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
          Length = 1563

 Score =  137 bits (346), Expect = 1e-30
 Identities = 71/170 (41%), Positives = 104/170 (61%)
 Frame = +3

Query: 6    PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
            PN  +Y+ +I  LC  G++  A +VF EM+   C PN  T N  +RV VK     +  +V
Sbjct: 1315 PNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQV 1374

Query: 186  VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAH 365
             +Q K+ G  PD  TY  LI+  C+    ++A+K L+  + +G   N S+FN IF   + 
Sbjct: 1375 YNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS-VKKGCNLNASSFNPIFGCISK 1433

Query: 366  LNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
            L DV  A+R+F +M++  C P+T TYN+LMR+FA  KSTDMV++LR+EMD
Sbjct: 1434 LGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMD 1483



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 44/166 (26%), Positives = 76/166 (45%)
 Frame = +3

Query: 15   ESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQ 194
            E++T L++     G   +A + F  M    C P+    +  +  L K     EA      
Sbjct: 1214 ETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDS 1273

Query: 195  FKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLND 374
             K R   PDV  Y  L+ G C+ G   +A +   EM   G+ PN   ++ + +       
Sbjct: 1274 LKDR-FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQ 1332

Query: 375  VKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEM 512
            +  A+ +F+ M + GCDP+  T+N LMR+  +   T+ V+++  +M
Sbjct: 1333 ITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQM 1378



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 41/166 (24%), Positives = 80/166 (48%)
 Frame = +3

Query: 3    RPNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFK 182
            +P+  +++ +I  L  + +  +A + F + L     P+V    + V    +   + EA +
Sbjct: 1245 KPDKIAFSVVISSLSKKRRAIEAQSFF-DSLKDRFEPDVVVYTSLVHGWCRAGNISEAER 1303

Query: 183  VVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTA 362
            V  + K  G+ P+V TY ++I   C+ G+   A     EMI  G  PN   FN++  V  
Sbjct: 1304 VFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHV 1363

Query: 363  HLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRL 500
                 +   +++N+M+  GC PD  TYN L+    ++ + +  +++
Sbjct: 1364 KAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKI 1409



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 1/138 (0%)
 Frame = +3

Query: 9    NSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVV 188
            N+ S+  +   +   G V  A  +F +M    C PN  T N  +R+    +      K+ 
Sbjct: 1420 NASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLR 1479

Query: 189  SQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMI-GRGLTPNPSAFNHIFEVTAH 365
             +  +  + P+  TY +LI   C +G W +A     EMI  + L P+   +  + +    
Sbjct: 1480 KEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRK 1539

Query: 366  LNDVKGAYRLFNRMENSG 419
               +K    L  +M N G
Sbjct: 1540 AGQLKKHEELVEKMVNRG 1557


>ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336219|gb|EFH66636.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 537

 Score =  136 bits (343), Expect = 2e-30
 Identities = 68/170 (40%), Positives = 105/170 (61%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           PN  +Y+ +I  LC  G++  A +VF +ML + C PN  T N  +RV VK     +  +V
Sbjct: 288 PNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQV 347

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAH 365
            +Q K+ G  PD  TY  LI+  C+    ++A+K L+ MI +    N S FN IF     
Sbjct: 348 YNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEK 407

Query: 366 LNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
             DV GA+R++++M  + C+P+T TYN+LMR+FA +KSTDMV++++++MD
Sbjct: 408 KRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMD 457



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 44/169 (26%), Positives = 83/169 (49%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           P+  +++ +I  L  + +  +A + F + L     P+V      VR   +  E+ EA KV
Sbjct: 219 PDQIAFSIVISNLSRKRRASEAQSFF-DSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKV 277

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAH 365
               K  G+ P+V TY ++I   C+ G+   A     +M+  G  PN   FN++  V   
Sbjct: 278 FKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVK 337

Query: 366 LNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEM 512
               +   +++N+M+  GC+PDT TYN L+    ++++ +  +++   M
Sbjct: 338 AGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTM 386



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
 Frame = +3

Query: 9   NSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVV 188
           N+ ++  + + +  +  V  A  ++ +M+ A C PN  T N  +R+   ++      K+ 
Sbjct: 394 NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMK 453

Query: 189 SQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMI-GRGLTPNPSAFNHIFEVTAH 365
                + + P+V TY LL+   C +G W +A K   EM+  + LTP+ S +  +      
Sbjct: 454 KDMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRR 513

Query: 366 LNDVKGAYRLFNRMENSG 419
              +K    L  +M   G
Sbjct: 514 AGQLKKHEELVEKMIQKG 531


>ref|XP_004238390.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Solanum lycopersicum]
          Length = 543

 Score =  135 bits (341), Expect = 4e-30
 Identities = 68/171 (39%), Positives = 100/171 (58%)
 Frame = +3

Query: 3   RPNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFK 182
           +PN  +Y+ +I  LC  G+   A++VF EM+   C PN  T N  +RV VK     +  +
Sbjct: 293 QPNVYTYSIVIDALCRSGQTTRAYDVFSEMIDVGCQPNAITFNNLMRVHVKAGRTEKVLQ 352

Query: 183 VVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTA 362
           V +Q K+    PDV TY  LI   C+     +A+K ++ M  +G  PN S FN IF   A
Sbjct: 353 VYNQMKRLSCDPDVITYNFLIDARCRDENRDEALKVVNVMAKKGCEPNASTFNPIFRCIA 412

Query: 363 HLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMD 515
              DV  A+RL+ +M+   C P+T T N+LM++FA++KSTDMV +++ EMD
Sbjct: 413 KARDVNAAHRLYAKMKELNCKPNTVTCNILMKMFAESKSTDMVFKIKNEMD 463



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 42/166 (25%), Positives = 76/166 (45%)
 Frame = +3

Query: 15  ESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQ 194
           E+++ LI+     G   +A + F  M   +C P+ +  +  V +L K     EA      
Sbjct: 193 ETFSILIRRYVRAGLASEAVHTFNRMEDYDCKPDRNAFSVVVGILCKKRRAAEAQSFFDS 252

Query: 195 FKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLND 374
            K +    DV  Y  L+ G C+ G   +A +   +M   G+ PN   ++ + +       
Sbjct: 253 LKDK-FEADVVLYTSLVHGWCRAGNISEAERIFRDMKDAGVQPNVYTYSIVIDALCRSGQ 311

Query: 375 VKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEM 512
              AY +F+ M + GC P+  T+N LMR+  +   T+ V+++  +M
Sbjct: 312 TTRAYDVFSEMIDVGCQPNAITFNNLMRVHVKAGRTEKVLQVYNQM 357



 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 33/139 (23%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
 Frame = +3

Query: 6   PNSESYTCLIKGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKV 185
           PN+ ++  + + +     V  A  ++ +M   NC PN  T N  +++  +++     FK+
Sbjct: 399 PNASTFNPIFRCIAKARDVNAAHRLYAKMKELNCKPNTVTCNILMKMFAESKSTDMVFKI 458

Query: 186 VSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMI-GRGLTPNPSAFNHIFEVTA 362
            ++  +  + P+V T+++LI   C +G W +A K   EMI  R L P+ S ++ + +   
Sbjct: 459 KNEMDENEVEPNVNTFKILISMYCGMGHWNNAYKYFREMIEERCLRPSESVYDMVLKQLR 518

Query: 363 HLNDVKGAYRLFNRMENSG 419
               ++    L  +M + G
Sbjct: 519 KAGQLRKHEELVEKMVDRG 537