BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00023305
         (684 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006853895.1| hypothetical protein AMTR_s00036p00162680 [A...   121   2e-25
ref|WP_022052134.1| putative uncharacterized protein [Firmicutes...   117   3e-24
ref|WP_006563795.1| DNA helicase UvrD [Oscillochloris trichoides...   116   6e-24
gb|ETP69006.1| ATP-dependent DNA helicase PcrA [Planomicrobium g...   114   2e-23
ref|WP_006830137.1| ATP-dependent DNA helicase PcrA [Planococcus...   112   1e-22
ref|WP_006926529.1| UvrD/REP helicase [Caldithrix abyssi] gi|371...   111   2e-22
ref|YP_004824179.1| UvrD/REP helicase [Rhodothermus marinus SG0....   111   2e-22
ref|XP_002911398.1| ATP-dependent DNA helicase pcra [Coprinopsis...   111   2e-22
ref|YP_008869918.1| hypothetical protein P147_WWE3C00001G0666 [c...   110   3e-22
gb|EIM91037.1| UvrD-helicase-domain-containing protein [Stereum ...   110   3e-22
ref|YP_001547359.1| UvrD/REP helicase [Herpetosiphon aurantiacus...   110   3e-22
ref|YP_002463242.1| UvrD/REP helicase [Chloroflexus aggregans DS...   110   4e-22
ref|WP_008432173.1| ATP-dependent DNA helicase PcrA [Planococcus...   109   7e-22
gb|ETT88819.1| ATP-dependent DNA helicase pcrA [Viridibacillus a...   109   9e-22
gb|EKE21181.1| hypothetical protein ACD_7C00316G0001 [uncultured...   109   9e-22
ref|WP_008408710.1| ATP-dependent DNA helicase PcrA [Bacillus is...   109   9e-22
ref|YP_006461062.1| superfamily I DNA and RNA helicase [Solibaci...   109   9e-22
ref|YP_003289690.1| UvrD/REP helicase [Rhodothermus marinus DSM ...   109   9e-22
emb|CBJ25859.1| ATP-dependent DNA helicase [Ectocarpus siliculosus]   108   2e-21
ref|WP_018753860.1| ATP-dependent DNA helicase PcrA [Paenibacill...   108   2e-21

>ref|XP_006853895.1| hypothetical protein AMTR_s00036p00162680 [Amborella trichopoda]
           gi|548857563|gb|ERN15362.1| hypothetical protein
           AMTR_s00036p00162680 [Amborella trichopoda]
          Length = 679

 Score =  121 bits (303), Expect = 2e-25
 Identities = 68/144 (47%), Positives = 88/144 (61%), Gaps = 4/144 (2%)
 Frame = -3

Query: 643 SKLSEDELGEDFKAWK----LNEEQKQAVAARDKYVRVVAGPGSGKTRVLTHRIAFLIKF 476
           S++   E  E  K  K    LN+EQ  AV     YVRV+AGPGSGKTRVLT RI  +I+ 
Sbjct: 62  SEIGAKEAAESLKERKGGLELNDEQLSAVEIDAPYVRVIAGPGSGKTRVLTFRILHMIRK 121

Query: 475 LRVPPSEITCITYTKKAANELKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYH 296
           L V PS I C+ +T KAA E+ ERL+  L  ++   L VGTVHS+C+ I+R S    +  
Sbjct: 122 LNVDPSSILCLAFTDKAAKEIYERLNCPLEADLMDPLMVGTVHSVCSRILRDSMHTLNIG 181

Query: 295 LSVDYSICDEDDSRRILRNILQEA 224
           L  DYSICD+  S  ++  IL+EA
Sbjct: 182 LDSDYSICDDTQSLNVVNRILKEA 205


>ref|WP_022052134.1| putative uncharacterized protein [Firmicutes bacterium CAG:631]
           gi|524219302|emb|CCZ84732.1| putative uncharacterized
           protein [Firmicutes bacterium CAG:631]
          Length = 705

 Score =  117 bits (293), Expect = 3e-24
 Identities = 61/123 (49%), Positives = 88/123 (71%)
 Frame = -3

Query: 595 LNEEQKQAVAARDKYVRVVAGPGSGKTRVLTHRIAFLIKFLRVPPSEITCITYTKKAANE 416
           LNE+Q QAV A D+Y+R++AG GSGKTRV+T RIA+LI+ L   PS+I  IT+T KAA E
Sbjct: 7   LNEQQYQAVTAHDQYLRIIAGAGSGKTRVITFRIAYLIEKLHYYPSQILAITFTNKAAEE 66

Query: 415 LKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHLSVDYSICDEDDSRRILRNI 236
           +K R+  +L ++ +  L++ T HS CA I+R+  +I +Y  +  ++I DEDD +RIL+ I
Sbjct: 67  IKLRVQTML-NDTNLNLRIATFHSFCARILRQEIKILNYPST--FTILDEDDQKRILKKI 123

Query: 235 LQE 227
           L E
Sbjct: 124 LDE 126


>ref|WP_006563795.1| DNA helicase UvrD [Oscillochloris trichoides]
           gi|308225148|gb|EFO78934.1| UvrD/REP helicase
           [Oscillochloris trichoides DG6]
          Length = 741

 Score =  116 bits (291), Expect = 6e-24
 Identities = 66/150 (44%), Positives = 95/150 (63%), Gaps = 2/150 (1%)
 Frame = -3

Query: 595 LNEEQKQAVAARDKYVRVVAGPGSGKTRVLTHRIAFLIKFLRVPPSEITCITYTKKAANE 416
           LN  Q++AV A D  V V+AGPGSGKTRVLTHR+A+LI+ L+V P +I  +T+T KAA E
Sbjct: 9   LNPAQQRAVQAVDGPVLVLAGPGSGKTRVLTHRVAYLIRALQVDPYQILAVTFTNKAARE 68

Query: 415 LKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHL--SVDYSICDEDDSRRILR 242
           +K+RL +L+G E +  L VGT HS+CA  +R+       HL    D+ I D DD  R++R
Sbjct: 69  MKQRLVHLVGEEAAYALTVGTFHSLCARFLRR----DSVHLGRERDFVIYDGDDQERLMR 124

Query: 241 NILQEACHGFDGIKASRQAMQTTVMECQSE 152
            +++E     D  K + +AM   +   ++E
Sbjct: 125 RVVREL--NLDEKKYAPRAMLARISSAKNE 152


>gb|ETP69006.1| ATP-dependent DNA helicase PcrA [Planomicrobium glaciei CHR43]
          Length = 737

 Score =  114 bits (286), Expect = 2e-23
 Identities = 65/172 (37%), Positives = 96/172 (55%)
 Frame = -3

Query: 595 LNEEQKQAVAARDKYVRVVAGPGSGKTRVLTHRIAFLIKFLRVPPSEITCITYTKKAANE 416
           +N EQ+QAV A D  + ++AG GSGKTRVLTHRIA+L+    V PS I  IT+T KAA E
Sbjct: 12  MNPEQEQAVKATDGPLLIMAGAGSGKTRVLTHRIAYLVLEKEVYPSNILAITFTNKAARE 71

Query: 415 LKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHLSVDYSICDEDDSRRILRNI 236
           ++ R+D LLGH    ++ V T HS+C  I+R  R I     S ++SI D  D   +++N+
Sbjct: 72  MRSRIDGLLGHGTGERMWVSTFHSMCVRILR--RDIDRLGFSKNFSILDTTDQLTVIKNV 129

Query: 235 LQEACHGFDGIKASRQAMQTTVMECQSECKVQTSMSFVQTYHSRRTKILMSI 80
           L++     D  K   + M   +   ++EC   T  +     H+   K +  +
Sbjct: 130 LKQL--DLDPKKYEPRTMLNAISSSKNECISATEFAANMNPHNPYEKTVADV 179


>ref|WP_006830137.1| ATP-dependent DNA helicase PcrA [Planococcus antarcticus]
           gi|388464171|gb|EIM06505.1| ATP-dependent DNA helicase
           pcrA [Planococcus antarcticus DSM 14505]
          Length = 737

 Score =  112 bits (280), Expect = 1e-22
 Identities = 59/149 (39%), Positives = 91/149 (61%)
 Frame = -3

Query: 595 LNEEQKQAVAARDKYVRVVAGPGSGKTRVLTHRIAFLIKFLRVPPSEITCITYTKKAANE 416
           +N EQ +AV A +  + ++AG GSGKTRVLTHRIA+L+   +V PS I  IT+T KAA E
Sbjct: 12  MNPEQAEAVKATEGPLLIMAGAGSGKTRVLTHRIAYLVLEKQVYPSNILAITFTNKAARE 71

Query: 415 LKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHLSVDYSICDEDDSRRILRNI 236
           ++ R+D LLGH   +++   T HS+C  I+R  R I   ++S ++SI D  D   +++N+
Sbjct: 72  MRNRIDGLLGHGTGQRMWASTFHSMCVRILR--RDIDRLNMSKNFSILDTTDQLTVIKNV 129

Query: 235 LQEACHGFDGIKASRQAMQTTVMECQSEC 149
           L++     D  K   + M   +   ++EC
Sbjct: 130 LKQ--QNLDPKKYEPRTMLNAISSAKNEC 156


>ref|WP_006926529.1| UvrD/REP helicase [Caldithrix abyssi] gi|371717904|gb|EHO39675.1|
           UvrD/REP helicase [Caldithrix abyssi DSM 13497]
          Length = 740

 Score =  111 bits (278), Expect = 2e-22
 Identities = 67/128 (52%), Positives = 86/128 (67%)
 Frame = -3

Query: 616 EDFKAWKLNEEQKQAVAARDKYVRVVAGPGSGKTRVLTHRIAFLIKFLRVPPSEITCITY 437
           EDF   +LNEEQ++AV A D  V ++AG GSGKTR LT+RIA+LIK     PSEI  +T+
Sbjct: 2   EDFLN-ELNEEQRKAVLATDGPVLIIAGAGSGKTRTLTYRIAYLIKKQLAKPSEILAVTF 60

Query: 436 TKKAANELKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHLSVDYSICDEDDS 257
           T KAA E+KERL  LLG + +  L +GT HS+CA I+R   +     LS +++I D DDS
Sbjct: 61  TNKAAREMKERLTTLLGSQ-ALPLWMGTFHSVCARILR--TEAEHIGLSRNFTIYDVDDS 117

Query: 256 RRILRNIL 233
            R LR IL
Sbjct: 118 VRALRKIL 125


>ref|YP_004824179.1| UvrD/REP helicase [Rhodothermus marinus SG0.5JP17-172]
           gi|503832112|ref|WP_014066106.1| ATP-dependent DNA
           helicase PcrA [Rhodothermus marinus]
           gi|345111510|gb|AEN72342.1| UvrD/REP helicase
           [Rhodothermus marinus SG0.5JP17-172]
          Length = 768

 Score =  111 bits (277), Expect = 2e-22
 Identities = 58/121 (47%), Positives = 81/121 (66%)
 Frame = -3

Query: 595 LNEEQKQAVAARDKYVRVVAGPGSGKTRVLTHRIAFLIKFLRVPPSEITCITYTKKAANE 416
           LN  Q+QAV   +  V ++AGPGSGKTR LTHRIA+LI   R  P +I  +T+T KAA E
Sbjct: 31  LNPVQRQAVQVTEGPVLIIAGPGSGKTRTLTHRIAYLIATGRARPHQILALTFTNKAARE 90

Query: 415 LKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHLSVDYSICDEDDSRRILRNI 236
           + ER++ L+G E +R + +GT H+I A I+R+  Q   Y  + D+SI D DDS R+LR +
Sbjct: 91  MMERIERLVGAEAARHIWMGTFHAIFARILRREGQRIGY--TPDFSIYDTDDSERLLREL 148

Query: 235 L 233
           +
Sbjct: 149 M 149


>ref|XP_002911398.1| ATP-dependent DNA helicase pcra [Coprinopsis cinerea okayama7#130]
           gi|298408518|gb|EFI27904.1| ATP-dependent DNA helicase
           pcra [Coprinopsis cinerea okayama7#130]
          Length = 966

 Score =  111 bits (277), Expect = 2e-22
 Identities = 60/125 (48%), Positives = 88/125 (70%), Gaps = 2/125 (1%)
 Frame = -3

Query: 595 LNEEQ-KQAVAARDKYVRVVAGPGSGKTRVLTHRIAFLIKFLRVPPSEITCITYTKKAAN 419
           LN  Q K A    +  ++++AGPGSGKTRVLT RIA LI    +PP+ I  +T+T KAAN
Sbjct: 9   LNSAQLKAATYPPNTSLQILAGPGSGKTRVLTTRIAHLITNCHLPPNSICAVTFTNKAAN 68

Query: 418 ELKERLDNLLGHEVSRQLKVGTVHSICASIIRK-SRQISDYHLSVDYSICDEDDSRRILR 242
           E+KERL  LLG E + QLK+GT HS+CA  +RK S+Q+S   +  ++++CD  +S++++ 
Sbjct: 69  EMKERLTKLLGKERTAQLKLGTFHSLCARFLRKYSKQVS---VPDNFTVCDAGESKKMIT 125

Query: 241 NILQE 227
           +IL+E
Sbjct: 126 SILKE 130


>ref|YP_008869918.1| hypothetical protein P147_WWE3C00001G0666 [candidate division WWE3
           bacterium RAAC2_WWE3_1] gi|563774278|ref|WP_023790411.1|
           hypothetical protein [candidate division WWE3 bacterium
           RAAC2_WWE3_1] gi|563351421|gb|AHB40577.1| hypothetical
           protein P147_WWE3C00001G0666 [candidate division WWE3
           bacterium RAAC2_WWE3_1]
          Length = 649

 Score =  110 bits (276), Expect = 3e-22
 Identities = 77/185 (41%), Positives = 103/185 (55%), Gaps = 1/185 (0%)
 Frame = -3

Query: 595 LNEEQKQAVAARDKYVRVVAGPGSGKTRVLTHRIAFLIKFLRVPPSEITCITYTKKAANE 416
           LNE+Q  AV+       VVAGPGSGKTRVLTHR+AFLI+  +VP + I C+T+T KAA+E
Sbjct: 12  LNEDQIAAVSHYLGPALVVAGPGSGKTRVLTHRVAFLIEEKKVPETNILCVTFTNKAADE 71

Query: 415 LKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHLSVDYSICDEDDSRRILRNI 236
           +K R+ ++LG E S     GT HSICA I+RK  +  D  + V Y I D DD   ++R+I
Sbjct: 72  IKSRVKDILGSENSLPWS-GTFHSICAKILRKDGR--DVGIPVSYVIYDTDDQVAVVRDI 128

Query: 235 LQEACHGFDGIKASRQAMQTTVMECQSE-CKVQTSMSFVQTYHSRRTKILMSIVPEISQF 59
             E   G D  +   +A+   V   +SE    +    + Q Y     K +  I PE  Q 
Sbjct: 129 --EKDFGMDTKRFHPRAVLEHVSGAKSEMVSPEMYAGYAQGYFQ---KTVAKIYPEYQQR 183

Query: 58  LECYN 44
           L   N
Sbjct: 184 LRQSN 188


>gb|EIM91037.1| UvrD-helicase-domain-containing protein [Stereum hirsutum FP-91666
           SS1]
          Length = 759

 Score =  110 bits (276), Expect = 3e-22
 Identities = 61/159 (38%), Positives = 100/159 (62%), Gaps = 1/159 (0%)
 Frame = -3

Query: 613 DFKAWKLNEEQKQAVA-ARDKYVRVVAGPGSGKTRVLTHRIAFLIKFLRVPPSEITCITY 437
           D+    LN  Q++AV    D  ++++AGPGSGKT+VLT RIA LI   R+PPS I  +T+
Sbjct: 3   DYITASLNPSQEKAVRHCPDIPLQILAGPGSGKTKVLTSRIAHLILHHRIPPSAICAVTF 62

Query: 436 TKKAANELKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHLSVDYSICDEDDS 257
           T KAANE+KERL  L+G + + Q+K+GT H++CA  +R+   ++   +  +++ICD D+S
Sbjct: 63  TNKAANEMKERLSKLIGRDWTYQIKMGTFHALCALFLRRHGTLAG--VDSNFTICDADES 120

Query: 256 RRILRNILQEACHGFDGIKASRQAMQTTVMECQSECKVQ 140
            +++  +++     ++    + +A   TVM   S+ K Q
Sbjct: 121 EKLITKLVKPRLEEWEAKGITVKA--KTVMSVISKAKAQ 157


>ref|YP_001547359.1| UvrD/REP helicase [Herpetosiphon aurantiacus DSM 785]
           gi|501143937|ref|WP_012192122.1| DNA helicase UvrD
           [Herpetosiphon aurantiacus] gi|159894151|gb|ABX07231.1|
           UvrD/REP helicase [Herpetosiphon aurantiacus DSM 785]
          Length = 758

 Score =  110 bits (276), Expect = 3e-22
 Identities = 58/123 (47%), Positives = 82/123 (66%)
 Frame = -3

Query: 595 LNEEQKQAVAARDKYVRVVAGPGSGKTRVLTHRIAFLIKFLRVPPSEITCITYTKKAANE 416
           LN +Q++AV A    V V+AGPGSGKTRVLTHRIA+LI  + V P  I  +T+T KAA E
Sbjct: 9   LNAQQQRAVQAIHGPVLVLAGPGSGKTRVLTHRIAYLINEVGVRPYNILAVTFTNKAARE 68

Query: 415 LKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHLSVDYSICDEDDSRRILRNI 236
           ++ER+ NL+G   +  + +GT HSICA  +R  R I     + D+ + D DD +R+++ I
Sbjct: 69  MRERIGNLIGESRAHDVMMGTFHSICARWLR--RDIQHLQRANDFVVYDADDQQRVMKQI 126

Query: 235 LQE 227
           L+E
Sbjct: 127 LRE 129


>ref|YP_002463242.1| UvrD/REP helicase [Chloroflexus aggregans DSM 9485]
           gi|506420946|ref|WP_015940665.1| DNA helicase UvrD
           [Chloroflexus aggregans] gi|219543068|gb|ACL24806.1|
           UvrD/REP helicase [Chloroflexus aggregans DSM 9485]
          Length = 742

 Score =  110 bits (275), Expect = 4e-22
 Identities = 61/123 (49%), Positives = 80/123 (65%)
 Frame = -3

Query: 595 LNEEQKQAVAARDKYVRVVAGPGSGKTRVLTHRIAFLIKFLRVPPSEITCITYTKKAANE 416
           LN +Q++AV      V V+AGPGSGKTRVLTHRIA+LI  + V P +I  +T+T KAA E
Sbjct: 10  LNPQQQRAVTTVTGPVLVLAGPGSGKTRVLTHRIAYLIDEVGVDPLQILAVTFTNKAARE 69

Query: 415 LKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHLSVDYSICDEDDSRRILRNI 236
           ++ERL  LLG  ++  L VGT HSICA  +R  R I       D+ I D DD  R+L+ +
Sbjct: 70  MRERLMALLGEAIAHDLTVGTFHSICARWLR--RDIVHLGRERDFVIYDTDDQERLLKRV 127

Query: 235 LQE 227
           L+E
Sbjct: 128 LRE 130


>ref|WP_008432173.1| ATP-dependent DNA helicase PcrA [Planococcus donghaensis]
           gi|323395910|gb|EGA88744.1| ATP-dependent DNA helicase
           pcrA [Planococcus donghaensis MPA1U2]
          Length = 737

 Score =  109 bits (273), Expect = 7e-22
 Identities = 58/149 (38%), Positives = 89/149 (59%)
 Frame = -3

Query: 595 LNEEQKQAVAARDKYVRVVAGPGSGKTRVLTHRIAFLIKFLRVPPSEITCITYTKKAANE 416
           +N EQ +AV   +  + ++AG GSGKTRVLTHRIA+L+   +V PS I  IT+T KAA E
Sbjct: 12  MNPEQAEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLVLEKQVYPSNILAITFTNKAARE 71

Query: 415 LKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHLSVDYSICDEDDSRRILRNI 236
           ++ R+D LLGH   +++   T HS+C  I+R  R I    +S ++SI D  D   +++N+
Sbjct: 72  MRNRIDGLLGHGTGQRMWASTFHSMCVRILR--RDIDKLGMSKNFSILDTTDQLTVIKNV 129

Query: 235 LQEACHGFDGIKASRQAMQTTVMECQSEC 149
           L++     D  K   + M   +   ++EC
Sbjct: 130 LKQ--QNLDPKKYEPRTMLNAISSSKNEC 156


>gb|ETT88819.1| ATP-dependent DNA helicase pcrA [Viridibacillus arenosi FSL R5-213]
          Length = 748

 Score =  109 bits (272), Expect = 9e-22
 Identities = 59/149 (39%), Positives = 91/149 (61%)
 Frame = -3

Query: 595 LNEEQKQAVAARDKYVRVVAGPGSGKTRVLTHRIAFLIKFLRVPPSEITCITYTKKAANE 416
           +N EQ +AV   +  + ++AG GSGKTRVLTHRIA+L+   +V PS+I  IT+T KAA E
Sbjct: 12  MNPEQAEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLVIEKKVYPSKILAITFTNKAARE 71

Query: 415 LKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHLSVDYSICDEDDSRRILRNI 236
           ++ER+D LLG+    Q+ V T HS+C  I+R  R I     + ++SI D  D   +++N+
Sbjct: 72  MRERIDGLLGNGTGAQMWVSTFHSMCVRILR--RDIDRIGYNKNFSILDTTDQLTVIKNV 129

Query: 235 LQEACHGFDGIKASRQAMQTTVMECQSEC 149
           L+E     D  +   ++M   +   ++EC
Sbjct: 130 LKEL--NIDPKRHDPRSMLNAISSAKNEC 156


>gb|EKE21181.1| hypothetical protein ACD_7C00316G0001 [uncultured bacterium]
          Length = 653

 Score =  109 bits (272), Expect = 9e-22
 Identities = 66/185 (35%), Positives = 107/185 (57%), Gaps = 1/185 (0%)
 Frame = -3

Query: 595 LNEEQKQAVAARDKYVRVVAGPGSGKTRVLTHRIAFLIKFLRVPPSEITCITYTKKAANE 416
           LN  QK+AV+     + V+AG G+GKT+V+THRIA+L+  L+V P  I  +T+T KAANE
Sbjct: 2   LNTHQKKAVSLSRGKILVLAGAGTGKTKVITHRIAYLVNDLKVEPGSILGLTFTNKAANE 61

Query: 415 LKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHLSVDYSICDEDDSRRILRNI 236
           +K+RL +L+G + ++ + + T HS C  I+R       Y  S ++SI DE D +R++  +
Sbjct: 62  MKQRLTDLIGQKKAKDVLLSTFHSFCLKILRMEADKIGY--SRNFSIYDEKDMQRLISQL 119

Query: 235 LQEACHGFDGIKASRQAMQTTVMECQSECKVQTSMSFVQTYHSRRTKILM-SIVPEISQF 59
           L+      D    ++     T+ E  SE K +       TY ++ +K L+ +I P+I   
Sbjct: 120 LK------DMHLDTKTVSPMTITEIFSEIKNKNIPYLEYTYKNKDSKDLVENIFPQIDVS 173

Query: 58  LECYN 44
           L+ +N
Sbjct: 174 LKTFN 178


>ref|WP_008408710.1| ATP-dependent DNA helicase PcrA [Bacillus isronensis]
           gi|405384005|gb|EKB43459.1| ATP-dependent DNA helicase
           pcrA [Bacillus isronensis B3W22]
          Length = 752

 Score =  109 bits (272), Expect = 9e-22
 Identities = 59/149 (39%), Positives = 90/149 (60%)
 Frame = -3

Query: 595 LNEEQKQAVAARDKYVRVVAGPGSGKTRVLTHRIAFLIKFLRVPPSEITCITYTKKAANE 416
           +N +Q +AV   +  + ++AG GSGKTRVLTHRIA+L+    V PS+I  IT+T KAA E
Sbjct: 12  MNPQQAEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLVVEREVYPSKILAITFTNKAARE 71

Query: 415 LKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHLSVDYSICDEDDSRRILRNI 236
           ++ER+D +LG+  +  + V T HS+C  I+R  R I     S  +SI D  D   +++NI
Sbjct: 72  MRERIDGILGNGTTESMWVSTFHSMCVRILR--RNIDRIGYSKSFSILDSSDQLTVIKNI 129

Query: 235 LQEACHGFDGIKASRQAMQTTVMECQSEC 149
           L++     D  K   +A+  T+   ++EC
Sbjct: 130 LKQ--DNIDPKKYDPRAILNTISSAKNEC 156


>ref|YP_006461062.1| superfamily I DNA and RNA helicase [Solibacillus silvestris
           StLB046] gi|504635490|ref|WP_014822592.1| ATP-dependent
           DNA helicase PcrA [Solibacillus silvestris]
           gi|327438551|dbj|BAK14916.1| superfamily I DNA and RNA
           helicase [Solibacillus silvestris StLB046]
          Length = 752

 Score =  109 bits (272), Expect = 9e-22
 Identities = 59/149 (39%), Positives = 90/149 (60%)
 Frame = -3

Query: 595 LNEEQKQAVAARDKYVRVVAGPGSGKTRVLTHRIAFLIKFLRVPPSEITCITYTKKAANE 416
           +N +Q +AV   +  + ++AG GSGKTRVLTHRIA+L+    V PS+I  IT+T KAA E
Sbjct: 12  MNPQQAEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLVVEREVYPSKILAITFTNKAARE 71

Query: 415 LKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHLSVDYSICDEDDSRRILRNI 236
           ++ER+D +LG+  +  + V T HS+C  I+R  R I     S  +SI D  D   +++NI
Sbjct: 72  MRERIDGILGNGTTESMWVSTFHSMCVRILR--RNIDRIGYSKSFSILDSSDQLTVIKNI 129

Query: 235 LQEACHGFDGIKASRQAMQTTVMECQSEC 149
           L++     D  K   +A+  T+   ++EC
Sbjct: 130 LKQ--DNIDPKKYDPRAILNTISSAKNEC 156


>ref|YP_003289690.1| UvrD/REP helicase [Rhodothermus marinus DSM 4252]
           gi|502605810|ref|WP_012842914.1| ATP-dependent DNA
           helicase PcrA [Rhodothermus marinus]
           gi|262333505|gb|ACY47302.1| UvrD/REP helicase
           [Rhodothermus marinus DSM 4252]
          Length = 768

 Score =  109 bits (272), Expect = 9e-22
 Identities = 57/121 (47%), Positives = 80/121 (66%)
 Frame = -3

Query: 595 LNEEQKQAVAARDKYVRVVAGPGSGKTRVLTHRIAFLIKFLRVPPSEITCITYTKKAANE 416
           LN  Q+QAV   +  V ++AGPGSGKTR LTHRIA+LI   R  P +I  +T+T KAA E
Sbjct: 31  LNPVQRQAVQVTEGPVLIIAGPGSGKTRTLTHRIAYLIATGRARPHQILALTFTNKAARE 90

Query: 415 LKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHLSVDYSICDEDDSRRILRNI 236
           + ER++ L+G E +R + +GT H+I A I+R+      Y  + D+SI D DDS R+LR +
Sbjct: 91  MMERIERLVGAEAARHIWMGTFHAIFARILRREGHRIGY--TPDFSIYDTDDSERLLREL 148

Query: 235 L 233
           +
Sbjct: 149 M 149


>emb|CBJ25859.1| ATP-dependent DNA helicase [Ectocarpus siliculosus]
          Length = 1196

 Score =  108 bits (270), Expect = 2e-21
 Identities = 63/152 (41%), Positives = 95/152 (62%), Gaps = 3/152 (1%)
 Frame = -3

Query: 598 KLNEEQKQAVAARDKYVRVVAGPGSGKTRVLTHRIAFLIKFLRVPPSEITCITYTKKAAN 419
           +LNE Q+ AV A    VRVVAGPGSGKTRVLT RIA L++ +  P   I  +T+TKKA+ 
Sbjct: 85  ELNESQRDAVFAEVGAVRVVAGPGSGKTRVLTRRIAHLVRNVGAPAWSILAVTFTKKASE 144

Query: 418 ELKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDY---HLSVDYSICDEDDSRRI 248
           E++ R+   +G +VS Q+ +GT HSICA ++R+           L   +SI D +DSRR+
Sbjct: 145 EMRARVRKTVGEDVSGQVALGTFHSICARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRL 204

Query: 247 LRNILQEACHGFDGIKASRQAMQTTVMECQSE 152
           L +I++E   G D  +     M++++ + +S+
Sbjct: 205 LTDIIKEM--GQDIKEVKPNMMRSSISKLKSQ 234


>ref|WP_018753860.1| ATP-dependent DNA helicase PcrA [Paenibacillus sanguinis]
          Length = 800

 Score =  108 bits (269), Expect = 2e-21
 Identities = 60/149 (40%), Positives = 90/149 (60%)
 Frame = -3

Query: 598 KLNEEQKQAVAARDKYVRVVAGPGSGKTRVLTHRIAFLIKFLRVPPSEITCITYTKKAAN 419
           +LN EQ+QAV A +  + ++AG GSGKTRVLTHRIA+LI   + PP  I  IT+T KAA 
Sbjct: 18  RLNPEQRQAVEATEGPLLIMAGAGSGKTRVLTHRIAYLIATRKAPPWAILAITFTNKAAR 77

Query: 418 ELKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHLSVDYSICDEDDSRRILRN 239
           E+++R+  L+G    R + V T HS+C  I+R  R I     + ++SI D  D   ++RN
Sbjct: 78  EMQDRVSRLVGGHEGRDIWVSTFHSMCVRILR--RDIERIGFTSNFSILDSTDQLSVIRN 135

Query: 238 ILQEACHGFDGIKASRQAMQTTVMECQSE 152
            ++E     D  K   +A+Q+ +   ++E
Sbjct: 136 CMKEM--NIDTKKFEPKAVQSMISTAKNE 162