BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00023253
         (1693 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299667.2| hypothetical protein POPTR_0001s21880g [Popu...   500   e-139
ref|XP_006826767.1| hypothetical protein AMTR_s00136p00085920 [A...   500   e-139
ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...   499   e-138
gb|EOX98058.1| Pentatricopeptide repeat superfamily protein isof...   499   e-138
ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containi...   498   e-138
gb|EOX98059.1| Pentatricopeptide repeat (PPR) superfamily protei...   495   e-137
ref|XP_004250704.1| PREDICTED: pentatricopeptide repeat-containi...   493   e-137
ref|XP_006343482.1| PREDICTED: pentatricopeptide repeat-containi...   492   e-136
ref|XP_004299940.1| PREDICTED: pentatricopeptide repeat-containi...   491   e-136
ref|XP_002529286.1| pentatricopeptide repeat-containing protein,...   491   e-136
ref|XP_006343483.1| PREDICTED: pentatricopeptide repeat-containi...   488   e-135
ref|XP_006343481.1| PREDICTED: pentatricopeptide repeat-containi...   488   e-135
gb|EMJ26349.1| hypothetical protein PRUPE_ppa002505mg [Prunus pe...   486   e-135
ref|XP_006431883.1| hypothetical protein CICLE_v10000525mg [Citr...   484   e-134
ref|XP_002455801.1| hypothetical protein SORBIDRAFT_03g025430 [S...   464   e-128
ref|NP_172560.2| pentatricopeptide repeat-containing protein [Ar...   464   e-128
ref|XP_006417404.1| hypothetical protein EUTSA_v10007006mg [Eutr...   462   e-127
ref|XP_003531588.2| PREDICTED: pentatricopeptide repeat-containi...   458   e-126
ref|XP_004968981.1| PREDICTED: pentatricopeptide repeat-containi...   457   e-126
ref|XP_002889841.1| hypothetical protein ARALYDRAFT_888388 [Arab...   457   e-126

>ref|XP_002299667.2| hypothetical protein POPTR_0001s21880g [Populus trichocarpa]
            gi|550347847|gb|EEE84472.2| hypothetical protein
            POPTR_0001s21880g [Populus trichocarpa]
          Length = 673

 Score =  500 bits (1287), Expect = e-139
 Identities = 248/558 (44%), Positives = 375/558 (67%), Gaps = 1/558 (0%)
 Frame = +1

Query: 22   QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKT 201
            ++AI+++Q S   +L   L+R+  +L+ Q LN+ LR FG   RW ++ QLF+WM    K 
Sbjct: 90   KAAILEVQQSP--HLDSALQRLGGMLKVQDLNIILRNFGEQCRWQDLSQLFDWMQRHNKI 147

Query: 202  NAASYTTFITLMGKGHQPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLF 381
            +A+SY+++I  MG    P KALE YH I D++ K NVF+CN+LL CL+ N K +++   F
Sbjct: 148  SASSYSSYIKFMGTSLNPAKALEIYHSIPDESKKTNVFICNSLLRCLVRNTKFDSSMKFF 207

Query: 382  NQMKIEGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCAS 561
            ++MK  GL PD  TYS L++ C+ I +GY+ A D  +    +GL+ D ++YG+L+++CAS
Sbjct: 208  HKMKNNGLTPDAITYSTLLAGCMKIKDGYSKALDLVQELNYNGLQMDSIMYGTLLAVCAS 267

Query: 562  NGLDKEAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVV 741
            N   +EA+SYF +MK EG  PN FH SSLLNAY++ GNY+KAE++V +M+++GL+PNKV+
Sbjct: 268  NNRCEEAQSYFNQMKDEGHSPNIFHYSSLLNAYSSDGNYKKAEELVQDMKSSGLVPNKVI 327

Query: 742  LTSLLKVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMN 921
            LT+LLKVY + GLF K+R L  E+D LG+  +E PYC+++DGL K+G + EA+ VF EM 
Sbjct: 328  LTTLLKVYVRGGLFEKSRDLLVELDTLGFAKNEMPYCLLMDGLAKNGLLDEARSVFNEMK 387

Query: 922  AKGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDMK 1101
             K ++S GYSYS +I++  + G  +E K+L E  E K +K+D+V +N +L AY + G+ +
Sbjct: 388  EKRVKSGGYSYSIMISSFCRGGLFEEAKELAEEFEAKYDKYDVVILNTILCAYCRTGEKE 447

Query: 1102 LIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSILI 1281
             +M+T++KMD   ISPD  T+  L+ YFCKEKLY  A   ++DM  +G+Q  +  CS LI
Sbjct: 448  SVMRTMRKMDELAISPDYNTFHILIKYFCKEKLYMLAYQTMEDMHRKGHQPMEELCSSLI 507

Query: 1282 KGLAKSGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYISQ 1461
              L K     +AF +Y+ LKSS+  +S A HE ++ IL++ R+LKDAY V+KDN E IS 
Sbjct: 508  LHLGKIKAHAEAFSVYSMLKSSKRTMSKAFHEDILHILIAGRLLKDAYVVVKDNAELISP 567

Query: 1462 VSIDKMVIEGFKSGDVHMLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLE 1638
             +I K      K GD++++ +++K    +GYKID ++  +  S Y  +   KD L+QLL+
Sbjct: 568  AAIKKFASSFVKLGDINLINDVMKVIHGSGYKIDQELFLMAVSRYIAEPEKKDLLIQLLQ 627

Query: 1639 WLGKQGYSLPDTVPKSLI 1692
            W+  QGY + D+  ++LI
Sbjct: 628  WMPGQGY-VVDSSTRNLI 644


>ref|XP_006826767.1| hypothetical protein AMTR_s00136p00085920 [Amborella trichopoda]
            gi|548831187|gb|ERM94004.1| hypothetical protein
            AMTR_s00136p00085920 [Amborella trichopoda]
          Length = 690

 Score =  500 bits (1287), Expect = e-139
 Identities = 251/547 (45%), Positives = 369/547 (67%), Gaps = 1/547 (0%)
 Frame = +1

Query: 22   QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKT 201
            ++AI ++Q +S  +L   L R+   LQ Q LN+ LR FG+  +W E+ QLF WM + GK 
Sbjct: 103  RAAITEIQGAS--DLGSALSRLGGKLQLQDLNIILRNFGKSNKWREISQLFNWMQKLGKV 160

Query: 202  NAASYTTFITLMGKGHQPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLF 381
            N +SY++FI  MG+     KAL+ Y  I D+ T  +V VCN++L CL  N K E++  LF
Sbjct: 161  NISSYSSFIKYMGRSGNTVKALQVYQSIKDEPTLYDVTVCNSILGCLARNGKFESSIKLF 220

Query: 382  NQMKIEGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCAS 561
             QMK  GL PD  TYS L++ C    NGY+ A    +  K SGL  D VIYGSL+++CAS
Sbjct: 221  EQMKKGGLTPDTVTYSSLLAGCNKNKNGYSQALQLIKELKISGLCMDSVIYGSLLAICAS 280

Query: 562  NGLDKEAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVV 741
            N   +EAE++F++M+ EGF PN FH SSLLNAYA +GN++KA+K+V+++++AGL+PNKV+
Sbjct: 281  NNQCEEAETFFQQMRAEGFSPNIFHYSSLLNAYAVEGNHKKADKLVEDIKSAGLVPNKVI 340

Query: 742  LTSLLKVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMN 921
            LT+LLKVY +   F K+R L  E+D LG+   E PYC+++DGL K G + EA+ VFE+M 
Sbjct: 341  LTTLLKVYVRGCFFDKSRELLAELDTLGFARDEMPYCLLMDGLAKAGHIDEAKAVFEDMK 400

Query: 922  AKGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDMK 1101
             K ++SDGYS+S +I+A+ + G ++E K L +  E    K+DLV +N LL+AY K G+M+
Sbjct: 401  QKNVKSDGYSHSIIISAYCREGLLEEAKLLAKDFESTSGKYDLVMLNTLLRAYCKGGEMQ 460

Query: 1102 LIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSILI 1281
             +MQT+KKMD   ISPD  T+  L+ YF KEKLY  A   ++DM ARG QI +  C+ LI
Sbjct: 461  YVMQTMKKMDELAISPDLHTFSILIKYFSKEKLYNLAYRTVEDMHARGLQIDEELCTSLI 520

Query: 1282 KGLAKSGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYISQ 1461
              L K+G A +A+ +YN+L+ ++  L  ALHEK+++IL++ R+LKDAY ++KDN E IS+
Sbjct: 521  LELGKAGAASEAYSVYNKLRYTKRTLCKALHEKVLKILVAGRLLKDAYVLVKDNSELISK 580

Query: 1462 VSIDKMVIEGFKSGDVHMLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLE 1638
             ++DK V    K G+++++ ++L+A  + GY I+  V ++  S Y  +   K+ L+ +LE
Sbjct: 581  SALDKFVTSFMKFGNINLINDVLRALHNNGYLINQGVFSLAVSRYVGEPEKKELLLHMLE 640

Query: 1639 WLGKQGY 1659
            W+  QGY
Sbjct: 641  WMSGQGY 647


>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic [Vitis vinifera]
            gi|298204537|emb|CBI23812.3| unnamed protein product
            [Vitis vinifera]
          Length = 659

 Score =  499 bits (1286), Expect = e-138
 Identities = 251/547 (45%), Positives = 369/547 (67%), Gaps = 1/547 (0%)
 Frame = +1

Query: 22   QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKT 201
            QSAI+++Q SS  +L   L R+ ++L+ Q LN+ LR+FG+L RW ++ QLF+WM +  K 
Sbjct: 76   QSAILEVQQSS--DLGSALARLGDMLKVQDLNVILRHFGKLCRWQDLSQLFDWMQKHEKI 133

Query: 202  NAASYTTFITLMGKGHQPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLF 381
              +SY+T+I  MGK   P KALE Y+ I D++ + NV VCN++L+CLI N K E +  LF
Sbjct: 134  TFSSYSTYIKFMGKSLNPIKALEIYNSIQDESVRNNVSVCNSVLSCLIRNGKFENSLKLF 193

Query: 382  NQMKIEGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCAS 561
            +QMK +GL PD  TYS L++ C+ + +GY+ A +  +  ++S L  D VIYG+L+++CAS
Sbjct: 194  HQMKQDGLRPDAVTYSTLLAGCMKVKHGYSKALELVQEMERSRLPMDSVIYGTLLAVCAS 253

Query: 562  NGLDKEAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVV 741
            N   KEAE+YF +MK EG  PN FH SSLLNAY+A G+Y+KA+ +V +M++AGL+PNKV+
Sbjct: 254  NNRCKEAENYFNQMKDEGHLPNVFHYSSLLNAYSADGDYKKADMLVQDMKSAGLVPNKVI 313

Query: 742  LTSLLKVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMN 921
            LT+LLKVY + GLF K+R L  E++ LGY   E PYC+++DGL K   + EA+ +FEEM 
Sbjct: 314  LTTLLKVYVRGGLFEKSRELLAELEDLGYAEDEMPYCLLMDGLAKSRRILEAKSIFEEMK 373

Query: 922  AKGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDMK 1101
             K ++SDGY YS +I+A  + G ++E K+L    E   +K+DLV +N +L AY + G+M+
Sbjct: 374  KKQVKSDGYCYSIMISAFCRSGLLKEAKQLARDFEATYDKYDLVMLNTMLCAYCRAGEME 433

Query: 1102 LIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSILI 1281
             +MQ ++KMD   ISPD  T+  L+ YFCKEKLY  A   ++DM  +G+Q  +  CS LI
Sbjct: 434  SVMQMMRKMDELAISPDWNTFHILIKYFCKEKLYLLAYRTMEDMHNKGHQPEEELCSSLI 493

Query: 1282 KGLAKSGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYISQ 1461
              L K     QAF +YN L+ S+  +  ALHEK++ IL++ R+LKDAY V+KDN   IS+
Sbjct: 494  SHLGKIRAHSQAFSVYNMLRYSKRTMCKALHEKILHILVAGRLLKDAYVVVKDNEGLISK 553

Query: 1462 VSIDKMVIEGFKSGDVHMLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLE 1638
             SI K      K G+V+++ +++KA   +GYKID ++  +  + Y  +   K+ L+ LL+
Sbjct: 554  PSIKKFATAFMKFGNVNLINDVMKAIHGSGYKIDQELFQMAVTRYIAEPEKKELLLHLLQ 613

Query: 1639 WLGKQGY 1659
            W+  QGY
Sbjct: 614  WMPGQGY 620


>gb|EOX98058.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
            cacao]
          Length = 717

 Score =  499 bits (1285), Expect = e-138
 Identities = 244/547 (44%), Positives = 375/547 (68%), Gaps = 1/547 (0%)
 Frame = +1

Query: 22   QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKT 201
            +SA++++Q SS  N    L+    +L+ Q LN+ +R+FG+L +W  + +LF WM + GKT
Sbjct: 70   KSALLEVQQSSDLN--SALQNFGGILKPQDLNVIIRHFGKLGKWHHLSELFAWMQQHGKT 127

Query: 202  NAASYTTFITLMGKGHQPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLF 381
            N +SY+++I +MGK   P KALE Y+ I D++T++NVF+CN+LL+ L+ N K E+   LF
Sbjct: 128  NGSSYSSYIKIMGKKLSPIKALEIYNSIPDESTRINVFICNSLLSSLVRNGKFESGIKLF 187

Query: 382  NQMKIEGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCAS 561
            ++MK +GL PD  TY+ L++ C+ I +G++ A +  +  K +GLK D V+YG+L+++CAS
Sbjct: 188  DKMKQDGLTPDSVTYNTLLAGCIKIKHGHSKALELIKELKYNGLKMDSVMYGTLLAVCAS 247

Query: 562  NGLDKEAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVV 741
            +GL +EA++YF +M++EG  PN +H SSLLNAY+  GNY KA+++V++M+++GL+PNKV+
Sbjct: 248  SGLHEEAQNYFNQMREEGHSPNLYHYSSLLNAYSYDGNYCKADELVEQMKSSGLVPNKVI 307

Query: 742  LTSLLKVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMN 921
            LT+LLKVY + GLF K+  L  E++ALGY   E P+C+++DGL K G + EA+ VF EM 
Sbjct: 308  LTTLLKVYVRGGLFEKSTKLLAELEALGYAEDEMPFCLLMDGLSKAGRLDEARSVFVEMQ 367

Query: 922  AKGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDMK 1101
             K ++SDGYS+S +I+A  + G  +E K+L +  E +  K+DLV +N +L AY + G+M+
Sbjct: 368  QKCVKSDGYSHSIMISALCRAGLFEEAKELAQDFEAQYNKYDLVMLNTMLCAYCRAGEME 427

Query: 1102 LIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSILI 1281
             +MQT+KKMD   ISPD  T+  L+ YFCKEKLY  A   ++DM  +GY   +  CS LI
Sbjct: 428  SVMQTMKKMDELAISPDYNTFHILIKYFCKEKLYLLAYKTMEDMHGKGYHPEEELCSSLI 487

Query: 1282 KGLAKSGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYISQ 1461
              L K    ++AF +YN L+ S+  +  ALHEK++ IL++ ++LKDAY V+KDN E ISQ
Sbjct: 488  FQLGKMKAHLEAFSVYNMLRYSKRTMCKALHEKILHILIAGQLLKDAYVVVKDNAELISQ 547

Query: 1462 VSIDKMVIEGFKSGDVHMLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLE 1638
             +I K      K G+++M+ ++LK    +GYKID  +  +  S Y  +   K+ L+QLL+
Sbjct: 548  PAITKFATAFMKLGNINMINDVLKVLHGSGYKIDQGLFQMAISRYLGQPEKKELLLQLLQ 607

Query: 1639 WLGKQGY 1659
            W+   GY
Sbjct: 608  WMPGHGY 614


>ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like [Cucumis sativus]
          Length = 668

 Score =  498 bits (1282), Expect = e-138
 Identities = 248/558 (44%), Positives = 375/558 (67%), Gaps = 1/558 (0%)
 Frame = +1

Query: 22   QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKT 201
            QSAI  ++  S   L P L R   +L+AQ LN+ LR+FG L RW ++ QLFEWM E GKT
Sbjct: 78   QSAIAQVKDCS--ELAPALARYGGLLKAQDLNVILRHFGMLSRWKDLSQLFEWMQETGKT 135

Query: 202  NAASYTTFITLMGKGHQPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLF 381
            N +SY+++I  MG+G  P KALE Y+ I + + K ++F+CN++LNCL+ N K +T+  LF
Sbjct: 136  NVSSYSSYIKFMGRGLNPLKALEVYNNIEEVSIKNSIFICNSILNCLVRNGKFDTSVKLF 195

Query: 382  NQMKIEGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCAS 561
            +QMK +GL PD  TYS +++ C+ + +GYA A +  +  + +GL  D V YG+LI++CAS
Sbjct: 196  HQMKNDGLCPDTVTYSTMLTGCIRVKHGYAKAMELLKELQDNGLCMDCVSYGTLIAICAS 255

Query: 562  NGLDKEAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVV 741
            +   ++AE +F +M+ EG  PN FH  SLLNAY+  G+Y+KA++++++M+  GL+PNKV+
Sbjct: 256  HNRLEDAERFFNQMRAEGHSPNMFHYGSLLNAYSINGDYKKADELIEDMKLTGLVPNKVI 315

Query: 742  LTSLLKVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMN 921
            LT+LLKVY + GLF K+R L  E+++LGY  +E PYC+++DGL K G +REA+ VF+EM 
Sbjct: 316  LTTLLKVYVRGGLFEKSRKLLSELESLGYGENEMPYCLLMDGLAKAGSIREAKTVFDEMK 375

Query: 922  AKGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDMK 1101
            AK +++DGY++S +I+A  + G ++E K L +  E   +++D+V +N +L AY + G+M+
Sbjct: 376  AKNVKTDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVILNTMLCAYCRAGEME 435

Query: 1102 LIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSILI 1281
             +MQ L+KMD   ISPD  T+  L+ YF KEKLY      L+DM  +G+Q  +  CS LI
Sbjct: 436  SVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHRKGHQPEEELCSSLI 495

Query: 1282 KGLAKSGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYISQ 1461
              L       +AF +YN LK S+  +  ALHEK++ IL++ R+LKDAY V+KDN   IS+
Sbjct: 496  LSLGNIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGVISK 555

Query: 1462 VSIDKMVIEGFKSGDVHMLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKDL-VQLLE 1638
             +I K      K G+V+++ +++KA   +GYKID  +  + TS Y      KDL +QLL+
Sbjct: 556  PAIRKFAFGFMKFGNVNLINDVMKAIHGSGYKIDQDLFMIATSRYIELPEKKDLFIQLLK 615

Query: 1639 WLGKQGYSLPDTVPKSLI 1692
            W+  QGY + D+  ++LI
Sbjct: 616  WMPGQGY-VVDSSTRNLI 632


>gb|EOX98059.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
            [Theobroma cacao]
          Length = 649

 Score =  495 bits (1275), Expect = e-137
 Identities = 244/547 (44%), Positives = 374/547 (68%), Gaps = 1/547 (0%)
 Frame = +1

Query: 22   QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKT 201
            +SA++++Q SS  N    L+    +L+ Q LN+ +R+FG+L +W  + +LF WM + GKT
Sbjct: 70   KSALLEVQQSSDLN--SALQNFGGILKPQDLNVIIRHFGKLGKWHHLSELFAWMQQHGKT 127

Query: 202  NAASYTTFITLMGKGHQPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLF 381
            N +SY+++I +MGK   P KALE Y+ I D++T++NVF+CN+LL+ L+ N K E+   LF
Sbjct: 128  NGSSYSSYIKIMGKKLSPIKALEIYNSIPDESTRINVFICNSLLSSLVRNGKFESGIKLF 187

Query: 382  NQMKIEGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCAS 561
            ++MK +GL PD  TY+ L++ C+ I +G++ A +  +  K +GLK D V+YG+L+++CAS
Sbjct: 188  DKMKQDGLTPDSVTYNTLLAGCIKIKHGHSKALELIKELKYNGLKMDSVMYGTLLAVCAS 247

Query: 562  NGLDKEAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVV 741
            +GL +EA++YF +M++EG  PN +H SSLLNAY+  GNY KA+++V++M+++GL+PNKV+
Sbjct: 248  SGLHEEAQNYFNQMREEGHSPNLYHYSSLLNAYSYDGNYCKADELVEQMKSSGLVPNKVI 307

Query: 742  LTSLLKVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMN 921
            LT+LLKVY + GLF K+  L  E++ALGY   E P+C+++DGL K G + EA+ VF EM 
Sbjct: 308  LTTLLKVYVRGGLFEKSTKLLAELEALGYAEDEMPFCLLMDGLSKAGRLDEARSVFVEMQ 367

Query: 922  AKGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDMK 1101
             K ++SDGYS+S +I+A  + G  +E K+L +  E +  K+DLV +N +L AY + G+M+
Sbjct: 368  QKCVKSDGYSHSIMISALCRAGLFEEAKELAQDFEAQYNKYDLVMLNTMLCAYCRAGEME 427

Query: 1102 LIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSILI 1281
             +MQT+KKMD   ISPD  T+  L+ YFCKEKLY  A   ++DM  +GY   +  CS LI
Sbjct: 428  SVMQTMKKMDELAISPDYNTFHILIKYFCKEKLYLLAYKTMEDMHGKGYHPEEELCSSLI 487

Query: 1282 KGLAKSGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYISQ 1461
              L K    ++AF +YN L+ S+  +  ALHEK++ IL++ ++LKDAY V+KDN E ISQ
Sbjct: 488  FQLGKMKAHLEAFSVYNMLRYSKRTMCKALHEKILHILIAGQLLKDAYVVVKDNAELISQ 547

Query: 1462 VSIDKMVIEGFKSGDVHMLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLE 1638
             +I K      K G+++M+ ++LK    +GYKID   +    S Y  +   K+ L+QLL+
Sbjct: 548  PAITKFATAFMKLGNINMINDVLKVLHGSGYKIDQMAI----SRYLGQPEKKELLLQLLQ 603

Query: 1639 WLGKQGY 1659
            W+   GY
Sbjct: 604  WMPGHGY 610


>ref|XP_004250704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like [Solanum lycopersicum]
          Length = 642

 Score =  493 bits (1270), Expect = e-137
 Identities = 249/558 (44%), Positives = 373/558 (66%), Gaps = 1/558 (0%)
 Frame = +1

Query: 22   QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKT 201
            QS I+ +Q SS  +L   L R  + L+ Q +N+ LRYFG+L R  E+ Q+FEWM +  K 
Sbjct: 63   QSTILHIQDSS--DLASALARHGDTLKVQDMNVILRYFGKLNRRPELCQVFEWMQQNQKI 120

Query: 202  NAASYTTFITLMGKGHQPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLF 381
            N ASY++++  MGK      A+E Y  I D++ K NV VCNA L+ LI N K E++  LF
Sbjct: 121  NVASYSSYVKFMGKSLSCVDAVEMYRDIKDRSIKFNVSVCNAFLSSLIKNGKSESSLKLF 180

Query: 382  NQMKIEGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCAS 561
             QMK +GL PD +TYS L++ C  ++ GY  A +  +    +GL+ D V YGSL+S+CAS
Sbjct: 181  TQMKRDGLVPDVFTYSTLLAGCAKVNGGYYKALELVQEMMSNGLEMDSVTYGSLLSVCAS 240

Query: 562  NGLDKEAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVV 741
            +    EA  YF++MK EG  PN +H SSLLNAY+A  NYEKAE +++EMR+AGL+ NKV+
Sbjct: 241  HKECNEAAKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAEALIEEMRSAGLVLNKVI 300

Query: 742  LTSLLKVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMN 921
             T+LLKVY K GLF K++ L +E++ALGY   E P+C+++DGL K G + EA+ VF+EM 
Sbjct: 301  YTTLLKVYVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMM 360

Query: 922  AKGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDMK 1101
             K +++DGYSYS +I+A  + G +++ KKL    E+K +K+D+V +N +L AY + G M+
Sbjct: 361  EKQVKTDGYSYSIMISAFCRRGLLEDAKKLASEFEEKYDKYDIVILNAMLSAYCRAGKME 420

Query: 1102 LIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSILI 1281
             +M  +KKMD   ISPD  T+  L+ YFCKEKLY  A   ++DM ++G+Q  +  CS LI
Sbjct: 421  NVMSMMKKMDDSAISPDWNTFNILIRYFCKEKLYLLAYRTMEDMHSKGHQPEEGLCSSLI 480

Query: 1282 KGLAKSGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYISQ 1461
              L K+G   +AF +YN L+ S+  +S+ALHE ++ IL++ R+LKDAY V+KDN  +ISQ
Sbjct: 481  YHLGKTGAHSEAFSVYNMLRYSKRTISNALHENILHILIAGRLLKDAYVVVKDNAGFISQ 540

Query: 1462 VSIDKMVIEGFKSGDVHMLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLE 1638
             +I K  +   +SG+V+++ +++ A  S+G+KID ++  +  + Y  K   K+ L+ LL+
Sbjct: 541  PAIKKFSVNFMRSGNVNLINDVMNAMHSSGHKIDQELFDLAIARYIAKPEKKELLLWLLK 600

Query: 1639 WLGKQGYSLPDTVPKSLI 1692
            W+  +GY++ D+  ++LI
Sbjct: 601  WMPVKGYAI-DSSTRNLI 617


>ref|XP_006343482.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 651

 Score =  492 bits (1267), Expect = e-136
 Identities = 249/558 (44%), Positives = 373/558 (66%), Gaps = 1/558 (0%)
 Frame = +1

Query: 22   QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKT 201
            QSAI+ +Q SS  +L   L R  + L+ Q +N+ LRYFG+L R  E+ Q FEWM +  K 
Sbjct: 63   QSAILHIQDSS--DLASALARHGDTLKVQDMNVILRYFGKLSRRRELYQAFEWMQQNQKI 120

Query: 202  NAASYTTFITLMGKGHQPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLF 381
            N ASY++++  MGK      A+E Y  I D++ K NV VCNA L+ LI N K E++  LF
Sbjct: 121  NVASYSSYVKFMGKSLSCVDAVEMYRDIKDRSIKYNVSVCNAFLSSLIKNGKSESSLKLF 180

Query: 382  NQMKIEGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCAS 561
             QMK +GL PD +TYS L++ C  ++ GY  A +  +    +GL+ D V YGSL+S+CAS
Sbjct: 181  TQMKRDGLVPDVFTYSTLLAGCAKVNGGYYKALELVQELMSNGLQMDSVTYGSLLSVCAS 240

Query: 562  NGLDKEAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVV 741
            +    EA  YF++MK EG  PN +H SSLLNAY+A  NYEKAE +++EMR+AGL+ NKV+
Sbjct: 241  HKECNEAAKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAEVLIEEMRSAGLVLNKVI 300

Query: 742  LTSLLKVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMN 921
             T+LLKVY K GLF K++ L +E++ALGY   E P+C+++DGL K G + EA+ VF+EM 
Sbjct: 301  YTTLLKVYVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMM 360

Query: 922  AKGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDMK 1101
             K +++DGYSYS +I+A  + G +++ KK+    E+K +K+D+V +N +L AY + G M+
Sbjct: 361  EKHVKTDGYSYSIMISAFCRSGLLEDAKKVASEFEEKYDKYDIVILNAMLSAYCRAGKME 420

Query: 1102 LIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSILI 1281
             +M  +KKMD   ISPD  T+  L+ YFCKEKLY  A   ++DM ++G+Q  +  CS LI
Sbjct: 421  NVMSMMKKMDDSAISPDWNTFNILIRYFCKEKLYLLAYRTMEDMHSKGHQPEEGLCSSLI 480

Query: 1282 KGLAKSGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYISQ 1461
              L K+G   +AF +YN L+ S+  +S+ALHE ++ IL++ R+LKDAY V+KDN  +ISQ
Sbjct: 481  YHLGKTGAHSEAFSVYNMLRYSKRTISNALHEHILHILIAGRLLKDAYVVVKDNAGFISQ 540

Query: 1462 VSIDKMVIEGFKSGDVHMLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLE 1638
             +I K  +   +SG+V+++ +++ A  S+G+KID ++  +  + Y  K   K+ L+ LL+
Sbjct: 541  PAIKKFSVNFMRSGNVNLINDVMNAMHSSGHKIDQELFDLAIARYIAKPEKKELLLWLLK 600

Query: 1639 WLGKQGYSLPDTVPKSLI 1692
            W+  +GY++ D+  ++LI
Sbjct: 601  WMPGKGYAI-DSSTRNLI 617


>ref|XP_004299940.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 642

 Score =  491 bits (1265), Expect = e-136
 Identities = 248/558 (44%), Positives = 370/558 (66%), Gaps = 1/558 (0%)
 Frame = +1

Query: 22   QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKT 201
            QSAI+ +Q SS  +L   L R+   L  Q LN  +R+FG L+RW ++ QLFEWM + GK 
Sbjct: 59   QSAILQVQHSS--DLESALTRLGGSLNVQDLNAIIRHFGMLKRWHDLSQLFEWMQQNGKV 116

Query: 202  NAASYTTFITLMGKGHQPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLF 381
            +A+SY+++I  MGK   P KALE Y+ I D++TK NV +CN++L  L+ + K + +  LF
Sbjct: 117  SASSYSSYIKFMGKSLNPVKALEIYNSIQDESTKKNVHICNSVLGSLVRSGKFDGSIKLF 176

Query: 382  NQMKIEGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCAS 561
            +QMK +GL PD  TYS L++ C+   +GY+ A +  +  + + L+ D VIYG+L+++CAS
Sbjct: 177  HQMKQDGLTPDAVTYSTLLAGCIKFKHGYSKALELVQELQNNELQMDSVIYGTLLAICAS 236

Query: 562  NGLDKEAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVV 741
            N   +EAESYF++MK EG  PNEFH SSLLNAY+  GNY+KA+ VV +M++AGL+PNKV 
Sbjct: 237  NNKWEEAESYFKQMKDEGHLPNEFHYSSLLNAYSISGNYKKADDVVQDMKSAGLVPNKVT 296

Query: 742  LTSLLKVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMN 921
            LT+LLK Y + GLF K+R L  E++ALGY   E PYCI++D   K G + +A+ VF+E+ 
Sbjct: 297  LTTLLKAYVRGGLFEKSRELLTELEALGYAEDEMPYCILMDAFAKAGRIEDAKLVFDEIK 356

Query: 922  AKGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDMK 1101
             K +RSDGYSYS +I+A  + G + + K+L +  E+  +K+DLV +N ++ AY + G+M 
Sbjct: 357  EKSVRSDGYSYSIMISAFCRGGLVDDAKQLAKDFERTYDKYDLVMLNTMICAYCRAGEMD 416

Query: 1102 LIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSILI 1281
             +M+ L+KMD  KI+PD  T+  L+ YFCKEKLY  A   ++DM  +GY   +  CS L+
Sbjct: 417  SVMEMLRKMDELKITPDNNTFHILIKYFCKEKLYMLAYKTMEDMHNKGYPPDEELCSSLM 476

Query: 1282 KGLAKSGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYISQ 1461
              L K     +A+ +YN L+ S+  +  ALHEK++ IL++ R+LKDAY V+KDN   IS+
Sbjct: 477  FHLGKIRAYSEAYSIYNILRYSKRTMCKALHEKILHILVAGRLLKDAYVVVKDNPRLISK 536

Query: 1462 VSIDKMVIEGFKSGDVHMLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLE 1638
             +  K      K G+++++ ++LKA   +G KID  +  +  S Y      KD L+QLL+
Sbjct: 537  AATMKFATAFMKLGNINLINDVLKAIDGSGCKIDQGIFQMAISRYISDPDKKDLLLQLLQ 596

Query: 1639 WLGKQGYSLPDTVPKSLI 1692
            W+  QGY++ D+  ++LI
Sbjct: 597  WMPGQGYTV-DSSTRNLI 613


>ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223531275|gb|EEF33118.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 672

 Score =  491 bits (1265), Expect = e-136
 Identities = 246/560 (43%), Positives = 374/560 (66%), Gaps = 3/560 (0%)
 Frame = +1

Query: 22   QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKT 201
            Q+AI+++Q S   +L   L R+  +L+AQ LN+ LR  G+  RW ++ +LF+WM +  K 
Sbjct: 87   QAAILEVQQSP--DLDSALRRLGAILKAQDLNVILRNLGKQSRWQDLSKLFDWMQQHSKI 144

Query: 202  NAASYTTFITLMGKGHQPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLF 381
            + +SYT+++  MGK   P KALE Y+ I D++ K NVF+CN++L+CL+ + K + +  LF
Sbjct: 145  SVSSYTSYMKFMGKSLNPAKALEIYNSIADESVKNNVFICNSVLSCLVRSGKFDISLKLF 204

Query: 382  NQMKIEGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCAS 561
            ++MK  GL PD  TYS L+S C+   +GY+   DF +  K +GL+ D VIYG+++++CAS
Sbjct: 205  HKMKQNGLTPDTITYSTLLSGCIKAKDGYSKTLDFVQELKYNGLQMDTVIYGTILAVCAS 264

Query: 562  NGLDKEAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVV 741
            +   +EAESYF +MK EG  PN FH SSLLNAYA+ GNY+KAE++V +M++ GL+PNKV+
Sbjct: 265  HNRCEEAESYFSQMKNEGHLPNVFHYSSLLNAYASSGNYKKAEELVQDMKSLGLVPNKVI 324

Query: 742  LTSLLKVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMN 921
             T+LLKVY + GLF K++ L  E++ LGY   E PYC+++DGL K G V EA+  F+EM 
Sbjct: 325  WTTLLKVYVRGGLFEKSQQLLLELETLGYAEDEMPYCLLMDGLSKAGRVDEARSFFDEMK 384

Query: 922  AKGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDMK 1101
             K ++SDGY+YS +I+A+ +   ++E K+L +  E K +K+D+V +N +L AY + GDM+
Sbjct: 385  EKNVKSDGYAYSIMISAYCRGRLLEEAKQLAKEFEAKYDKYDVVILNTMLCAYCRAGDME 444

Query: 1102 LIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSILI 1281
             +MQT++KMD   ISP   T+  L+ YFCK+KLY  A   ++DM  +G+Q  +  CS+LI
Sbjct: 445  SVMQTMRKMDELAISPSYCTFHILIKYFCKQKLYLLAYQTMEDMHRKGHQPEEELCSMLI 504

Query: 1282 KGLAKSGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYISQ 1461
              L K+    +AF +Y  LK  +  +  ALHEK++ +LL  ++LKDAY V+KDN E ISQ
Sbjct: 505  FHLGKAKAYTEAFSVYTMLKYGKRTMCKALHEKILHVLLGGQLLKDAYVVVKDNAELISQ 564

Query: 1462 VSIDKMVIEGFKSGDVHMLINILKAYQSTGYKIDM--KVVTVVTSHYYMKGRDKD-LVQL 1632
             +I K      K G+++++ +++K   S+GYKID   ++  +  S Y  +   KD LVQL
Sbjct: 565  AAIKKFANAFMKLGNINLINDVMKVIHSSGYKIDQASELFQMAISRYIAQPEKKDLLVQL 624

Query: 1633 LEWLGKQGYSLPDTVPKSLI 1692
            L+W+   GY + D   ++LI
Sbjct: 625  LQWMPGHGY-VVDASTRNLI 643


>ref|XP_006343483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like isoform X3 [Solanum tuberosum]
          Length = 646

 Score =  488 bits (1255), Expect = e-135
 Identities = 249/559 (44%), Positives = 373/559 (66%), Gaps = 2/559 (0%)
 Frame = +1

Query: 22   QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKT 201
            QSAI+ +Q SS  +L   L R  + L+ Q +N+ LRYFG+L R  E+ Q FEWM +  K 
Sbjct: 63   QSAILHIQDSS--DLASALARHGDTLKVQDMNVILRYFGKLSRRRELYQAFEWMQQNQKI 120

Query: 202  NAASYTTFITLMGKGHQPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLF 381
            N ASY++++  MGK      A+E Y  I D++ K NV VCNA L+ LI N K E++  LF
Sbjct: 121  NVASYSSYVKFMGKSLSCVDAVEMYRDIKDRSIKYNVSVCNAFLSSLIKNGKSESSLKLF 180

Query: 382  NQMKIEGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCAS 561
             QMK +GL PD +TYS L++ C  ++ GY  A +  +    +GL+ D V YGSL+S+CAS
Sbjct: 181  TQMKRDGLVPDVFTYSTLLAGCAKVNGGYYKALELVQELMSNGLQMDSVTYGSLLSVCAS 240

Query: 562  NGLDKEAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVV 741
            +    EA  YF++MK EG  PN +H SSLLNAY+A  NYEKAE +++EMR+AGL+ NKV+
Sbjct: 241  HKECNEAAKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAEVLIEEMRSAGLVLNKVI 300

Query: 742  LTSLLKVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMN 921
             T+LLKVY K GLF K++ L +E++ALGY   E P+C+++DGL K G + EA+ VF+EM 
Sbjct: 301  YTTLLKVYVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMM 360

Query: 922  AKGIR-SDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDM 1098
             K ++ +DGYSYS +I+A  + G +++ KK+    E+K +K+D+V +N +L AY + G M
Sbjct: 361  EKHVKTADGYSYSIMISAFCRSGLLEDAKKVASEFEEKYDKYDIVILNAMLSAYCRAGKM 420

Query: 1099 KLIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSIL 1278
            + +M  +KKMD   ISPD  T+  L+ YFCKEKLY  A   ++DM ++G+Q  +  CS L
Sbjct: 421  ENVMSMMKKMDDSAISPDWNTFNILIRYFCKEKLYLLAYRTMEDMHSKGHQPEEGLCSSL 480

Query: 1279 IKGLAKSGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYIS 1458
            I  L K+G   +AF +YN L+ S+  +S+ALHE ++ IL++ R+LKDAY V+KDN  +IS
Sbjct: 481  IYHLGKTGAHSEAFSVYNMLRYSKRTISNALHEHILHILIAGRLLKDAYVVVKDNAGFIS 540

Query: 1459 QVSIDKMVIEGFKSGDVHMLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLL 1635
            Q +I K  +   +SG+V+++ +++ A  S+G+KID ++  +  + Y  K   K+ L+ LL
Sbjct: 541  QPAIKKFSVNFMRSGNVNLINDVMNAMHSSGHKIDQELFDLAIARYIAKPEKKELLLWLL 600

Query: 1636 EWLGKQGYSLPDTVPKSLI 1692
            +W+  +GY++ D+  ++LI
Sbjct: 601  KWMPGKGYAI-DSSTRNLI 618


>ref|XP_006343481.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 652

 Score =  488 bits (1255), Expect = e-135
 Identities = 249/559 (44%), Positives = 373/559 (66%), Gaps = 2/559 (0%)
 Frame = +1

Query: 22   QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKT 201
            QSAI+ +Q SS  +L   L R  + L+ Q +N+ LRYFG+L R  E+ Q FEWM +  K 
Sbjct: 63   QSAILHIQDSS--DLASALARHGDTLKVQDMNVILRYFGKLSRRRELYQAFEWMQQNQKI 120

Query: 202  NAASYTTFITLMGKGHQPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLF 381
            N ASY++++  MGK      A+E Y  I D++ K NV VCNA L+ LI N K E++  LF
Sbjct: 121  NVASYSSYVKFMGKSLSCVDAVEMYRDIKDRSIKYNVSVCNAFLSSLIKNGKSESSLKLF 180

Query: 382  NQMKIEGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCAS 561
             QMK +GL PD +TYS L++ C  ++ GY  A +  +    +GL+ D V YGSL+S+CAS
Sbjct: 181  TQMKRDGLVPDVFTYSTLLAGCAKVNGGYYKALELVQELMSNGLQMDSVTYGSLLSVCAS 240

Query: 562  NGLDKEAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVV 741
            +    EA  YF++MK EG  PN +H SSLLNAY+A  NYEKAE +++EMR+AGL+ NKV+
Sbjct: 241  HKECNEAAKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAEVLIEEMRSAGLVLNKVI 300

Query: 742  LTSLLKVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMN 921
             T+LLKVY K GLF K++ L +E++ALGY   E P+C+++DGL K G + EA+ VF+EM 
Sbjct: 301  YTTLLKVYVKGGLFEKSKELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMM 360

Query: 922  AKGIR-SDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDM 1098
             K ++ +DGYSYS +I+A  + G +++ KK+    E+K +K+D+V +N +L AY + G M
Sbjct: 361  EKHVKTADGYSYSIMISAFCRSGLLEDAKKVASEFEEKYDKYDIVILNAMLSAYCRAGKM 420

Query: 1099 KLIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSIL 1278
            + +M  +KKMD   ISPD  T+  L+ YFCKEKLY  A   ++DM ++G+Q  +  CS L
Sbjct: 421  ENVMSMMKKMDDSAISPDWNTFNILIRYFCKEKLYLLAYRTMEDMHSKGHQPEEGLCSSL 480

Query: 1279 IKGLAKSGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYIS 1458
            I  L K+G   +AF +YN L+ S+  +S+ALHE ++ IL++ R+LKDAY V+KDN  +IS
Sbjct: 481  IYHLGKTGAHSEAFSVYNMLRYSKRTISNALHEHILHILIAGRLLKDAYVVVKDNAGFIS 540

Query: 1459 QVSIDKMVIEGFKSGDVHMLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLL 1635
            Q +I K  +   +SG+V+++ +++ A  S+G+KID ++  +  + Y  K   K+ L+ LL
Sbjct: 541  QPAIKKFSVNFMRSGNVNLINDVMNAMHSSGHKIDQELFDLAIARYIAKPEKKELLLWLL 600

Query: 1636 EWLGKQGYSLPDTVPKSLI 1692
            +W+  +GY++ D+  ++LI
Sbjct: 601  KWMPGKGYAI-DSSTRNLI 618


>gb|EMJ26349.1| hypothetical protein PRUPE_ppa002505mg [Prunus persica]
          Length = 664

 Score =  486 bits (1252), Expect = e-135
 Identities = 244/558 (43%), Positives = 377/558 (67%), Gaps = 1/558 (0%)
 Frame = +1

Query: 22   QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKT 201
            QSAI+++Q SS  +L   L R+   L+ Q LN  +R+FG L+RW ++ QLFEWM + GK 
Sbjct: 75   QSAILEVQESS--DLDSALTRLGGSLKVQDLNAIIRHFGILKRWHDLSQLFEWMQQNGKI 132

Query: 202  NAASYTTFITLMGKGHQPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLF 381
            +A+SY+++I  MGK   P KALE Y+ I D +TK NV +CN++L  LI + K + +F LF
Sbjct: 133  SASSYSSYIKFMGKSLNPVKALEIYNNIQDASTKKNVHICNSVLGSLIRSGKFDGSFKLF 192

Query: 382  NQMKIEGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCAS 561
            +QMK +GL PD  TYS L++ C  + +GY+ A +  +  +++ L+ D VIYG+L+++CAS
Sbjct: 193  HQMKQDGLTPDAVTYSTLLAGCNKVKHGYSKALELVQELQRNELQMDSVIYGTLLAVCAS 252

Query: 562  NGLDKEAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVV 741
            N   +EAE YF++MK EG+ PN FH S++LNAY+  GNY++A+ +V +M++AGL+PNKV+
Sbjct: 253  NNKLEEAEGYFKQMKNEGYLPNVFHYSAMLNAYSISGNYKEADDLVQDMKSAGLVPNKVI 312

Query: 742  LTSLLKVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMN 921
            LT+LLKVY + GLF K+R L  E++ALGY   E PYC+++D L K G + EA+ VF+EM 
Sbjct: 313  LTTLLKVYVRGGLFEKSRELLAELEALGYAEDEMPYCLLMDALAKAGRIHEAKLVFDEMK 372

Query: 922  AKGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDMK 1101
             K IRS+GYSYS +I+A  + G +++ K+L + +E+  +KFDLV +N ++ AY + G+M 
Sbjct: 373  EKSIRSNGYSYSIMISAFCRGGLLEDAKQLSKDVERTHDKFDLVMLNTMICAYCRAGEMD 432

Query: 1102 LIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSILI 1281
             +M+ ++KMD  KI+PD  T+  L+ YFCKEKLY  A   ++DM  +G+Q  +  CS L+
Sbjct: 433  SVMEMMRKMDEQKITPDYNTFHILIKYFCKEKLYLLAYQTMEDMHNKGHQPDEELCSSLM 492

Query: 1282 KGLAKSGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYISQ 1461
              L K     +A+ +YN L+ S+  +  ALHEK++ ILL+ ++LKDAY V+KDN   IS+
Sbjct: 493  FLLGKIRAYSEAYSVYNILRYSKRTMCKALHEKILHILLAGQLLKDAYVVVKDNAGLISK 552

Query: 1462 VSIDKMVIEGFKSGDVHMLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLE 1638
             ++ K      K G+++++ ++LK   ++G KID  +  +  S Y      K+ L+Q+L 
Sbjct: 553  PAVKKFSTAFLKLGNINLINDVLKVIDASGCKIDQGLFQMAISRYIALPEKKELLIQMLL 612

Query: 1639 WLGKQGYSLPDTVPKSLI 1692
            W+  QGY + D+  ++LI
Sbjct: 613  WMPGQGY-VVDSATRNLI 629


>ref|XP_006431883.1| hypothetical protein CICLE_v10000525mg [Citrus clementina]
            gi|557534005|gb|ESR45123.1| hypothetical protein
            CICLE_v10000525mg [Citrus clementina]
          Length = 660

 Score =  484 bits (1246), Expect = e-134
 Identities = 243/558 (43%), Positives = 375/558 (67%), Gaps = 1/558 (0%)
 Frame = +1

Query: 22   QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKT 201
            +SAI+++Q SS  +L  +LER+  +L+   LN  LR+FG L R  +VLQLFEWM + GKT
Sbjct: 75   KSAILEVQQSS--DLTSSLERLGGILKVPDLNAILRHFGDLGRGRDVLQLFEWMQQHGKT 132

Query: 202  NAASYTTFITLMGKGHQPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLF 381
            + +SY+++I  +GK     KALE Y+ I D++ K+NVF+CN++L+CL+ N K E++  LF
Sbjct: 133  SISSYSSYIKFLGKSGNSLKALEIYNSITDESDKVNVFICNSILSCLVRNGKFESSLKLF 192

Query: 382  NQMKIEGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCAS 561
            ++MK  GL PD  TY+ L++ C+   NGY+ A +  +  K +G + D V+YG L+++CAS
Sbjct: 193  DKMKQSGLTPDAVTYNTLLTGCIKDKNGYSKALELVQELKYNGAQMDNVMYGILLAICAS 252

Query: 562  NGLDKEAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVV 741
            N L  +A+SYF +MK EG  PN +H SSLLNAY++ G+Y KA++++ +M+++GL+PNKV+
Sbjct: 253  NNLCAKAQSYFNQMKVEGHSPNVYHYSSLLNAYSSGGDYTKADELIQDMKSSGLVPNKVI 312

Query: 742  LTSLLKVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMN 921
            LT+LLKVY + GLF K+R L  E+D LGY  +E PYC+++DGL K G + EA+ VF EM 
Sbjct: 313  LTTLLKVYVRGGLFEKSRELLAELDTLGYAENEMPYCLLMDGLSKAGCLDEARVVFNEMQ 372

Query: 922  AKGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDMK 1101
             K ++SDGY++S +I+A  + G  +E K+L    E K +K+D+V +N +L AY + GDM+
Sbjct: 373  EKCVKSDGYAHSIMISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDME 432

Query: 1102 LIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSILI 1281
             +M  ++K+D   ISPD  T+  L+ YFCKEK+Y  A   + DM  +G+Q  +  CS LI
Sbjct: 433  SVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 492

Query: 1282 KGLAKSGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYISQ 1461
              L K     +A  +YN L+ S+  +  ALHEK++ IL+S ++LKDAY V+KDN E IS 
Sbjct: 493  FHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISH 552

Query: 1462 VSIDKMVIEGFKSGDVHMLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLE 1638
              I K      + G+++++ +++KA  +TGY+ID  +  +  + Y  +   K+ L++LLE
Sbjct: 553  PVIKKFASAFVRLGNINLVNDVMKAIHTTGYRIDQGIFHIAIARYIAEREKKELLLKLLE 612

Query: 1639 WLGKQGYSLPDTVPKSLI 1692
            W+  QGY + D+  ++LI
Sbjct: 613  WMTGQGY-VVDSSTRNLI 629


>ref|XP_002455801.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
            gi|241927776|gb|EES00921.1| hypothetical protein
            SORBIDRAFT_03g025430 [Sorghum bicolor]
          Length = 642

 Score =  464 bits (1194), Expect = e-128
 Identities = 231/558 (41%), Positives = 364/558 (65%), Gaps = 1/558 (0%)
 Frame = +1

Query: 22   QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKT 201
            +SA+ +++ +     +  L R  EVLQ Q  N+ LR+ G  +RW ++ ++FEWM E+  T
Sbjct: 55   RSAVAEVKGAPDP--IAALNRFEEVLQTQDCNIILRHCGDTRRWDDLSKVFEWMQEREMT 112

Query: 202  NAASYTTFITLMGKGHQPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLF 381
            NAASY+++   +G    P +AL+ Y  I D+  K++V VCN++L CL+ N +++++F L+
Sbjct: 113  NAASYSSYFKYLGLSRDPARALQVYGAIKDQTMKVHVSVCNSVLGCLVKNGRLDSSFKLY 172

Query: 382  NQMKIEGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCAS 561
            ++M  EGL+PD +TYS L+S C+ +  GY  A +     K  GL+ D+VIYG+L+++CAS
Sbjct: 173  DEMIREGLSPDPFTYSTLLSGCMKLKQGYTKAMELINDMKSRGLQMDIVIYGTLLAICAS 232

Query: 562  NGLDKEAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVV 741
            +   +EAE YF++MK EG  PN FH SSLLNAY+   +YEKAE ++ ++R++GL PNKV+
Sbjct: 233  HNYCEEAEVYFQKMKDEGHCPNLFHYSSLLNAYSENSDYEKAELLMKDLRSSGLTPNKVI 292

Query: 742  LTSLLKVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMN 921
            LT+LLKVY+K GLF KA+ L  E++A G+   E PYCI+IDGLVK G+++EA+ +F EM 
Sbjct: 293  LTTLLKVYSKGGLFEKAKELLTELEASGFAQDEMPYCILIDGLVKGGKIQEAKILFNEMK 352

Query: 922  AKGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDMK 1101
             KG++SDGY++S +I+A  + G  +E K+L +  E +   +DLV +N  L+ Y    DM+
Sbjct: 353  EKGVKSDGYAFSIMISALHRGGHHEESKQLAKEFESENASYDLVMLNTSLRTYCSTNDME 412

Query: 1102 LIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSILI 1281
             +M+ LKKMD   ISPD  T+  L+ YFC  K+Y  A   ++DM  +G+Q+ +  CS ++
Sbjct: 413  SVMRMLKKMDELNISPDNITFNTLIRYFCNSKVYHLAYKTVEDMHTKGHQLNEELCSHVM 472

Query: 1282 KGLAKSGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYISQ 1461
              L K G   +AF LYN L+ S+  +  +LHEK + IL++  +LK+AY V+KDN + IS 
Sbjct: 473  VQLGKGGFPSEAFSLYNMLRYSKRTVHKSLHEKALGILVAAELLKEAYIVVKDNADLISP 532

Query: 1462 VSIDKMVIEGFKSGDVHMLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLE 1638
             S++K       SG+++++ +++KA   +G++I   +       Y  K   K  LV LL+
Sbjct: 533  ASLEKFAKSFMVSGNINLINDVMKALNRSGWRISQDIFGRAIKRYIRKPDKKQLLVCLLD 592

Query: 1639 WLGKQGYSLPDTVPKSLI 1692
            W+  QGYS+ D+  ++L+
Sbjct: 593  WMIGQGYSV-DSSSRNLL 609


>ref|NP_172560.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|122242678|sp|Q0WVV0.1|PPR31_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g10910, chloroplastic; Flags: Precursor
            gi|110741600|dbj|BAE98748.1| membrane-associated
            salt-inducible protein isolog [Arabidopsis thaliana]
            gi|332190541|gb|AEE28662.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 664

 Score =  464 bits (1193), Expect = e-128
 Identities = 231/558 (41%), Positives = 371/558 (66%), Gaps = 1/558 (0%)
 Frame = +1

Query: 22   QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKT 201
            +SAI ++Q SS  + L +L+R+  VL+ Q LN+ LR FG   RW +++QLFEWM + GK 
Sbjct: 73   KSAISEVQRSS--DFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHGKI 130

Query: 202  NAASYTTFITLMGKGHQPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLF 381
            + ++Y++ I  +G      KALE Y  I D++TK+NV++CN++L+CL+ N K+++   LF
Sbjct: 131  SVSTYSSCIKFVG-AKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLF 189

Query: 382  NQMKIEGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCAS 561
            +QMK +GL PD  TY+ L++ C+ + NGY  A +       +G++ D V+YG+++++CAS
Sbjct: 190  DQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICAS 249

Query: 562  NGLDKEAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVV 741
            NG  +EAE++ ++MK EG  PN +H SSLLN+Y+ KG+Y+KA++++ EM++ GL+PNKV+
Sbjct: 250  NGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVM 309

Query: 742  LTSLLKVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMN 921
            +T+LLKVY K GLF ++R L  E+++ GY  +E PYC+++DGL K G++ EA+ +F++M 
Sbjct: 310  MTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMK 369

Query: 922  AKGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDMK 1101
             KG+RSDGY+ S +I+A  +    +E K+L    E   EK DLV +N +L AY + G+M+
Sbjct: 370  GKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEME 429

Query: 1102 LIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSILI 1281
             +M+ +KKMD   +SPD  T+  L+ YF KEKL+  A     DM ++G+++ +  CS LI
Sbjct: 430  SVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLI 489

Query: 1282 KGLAKSGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYISQ 1461
              L K     +AF +YN L+ S+  +   LHEK++ IL+   +LKDAY V+KDN + ISQ
Sbjct: 490  YHLGKIRAQAEAFSVYNMLRYSKRTICKELHEKILHILIQGNLLKDAYIVVKDNAKMISQ 549

Query: 1462 VSIDKMVIEGFKSGDVHMLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLE 1638
             ++ K       SG+++++ ++LK    +G+KID     +  S Y  +   K+ L+QLL+
Sbjct: 550  PTLKKFGRAFMISGNINLVNDVLKVLHGSGHKIDQVQFEIAISRYISQPDKKELLLQLLQ 609

Query: 1639 WLGKQGYSLPDTVPKSLI 1692
            W+  QGY + D+  ++LI
Sbjct: 610  WMPGQGY-VVDSSTRNLI 626


>ref|XP_006417404.1| hypothetical protein EUTSA_v10007006mg [Eutrema salsugineum]
            gi|557095175|gb|ESQ35757.1| hypothetical protein
            EUTSA_v10007006mg [Eutrema salsugineum]
          Length = 666

 Score =  462 bits (1188), Expect = e-127
 Identities = 229/558 (41%), Positives = 374/558 (67%), Gaps = 1/558 (0%)
 Frame = +1

Query: 22   QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKT 201
            +SAI +++ S   + L +L+R+  VL+ Q LN+ LR FG   RW +++QLF+WM +QGK 
Sbjct: 74   KSAISEVERSP--DFLSSLQRLAGVLKVQDLNVILRDFGISGRWQDLIQLFDWMQQQGKI 131

Query: 202  NAASYTTFITLMGKGHQPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLF 381
            + ++Y++ I  +G      KALE Y  I D++TK+NV++CN++L+CL+ N K+E+ F LF
Sbjct: 132  SVSTYSSCIKFVG-AKSVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLESCFKLF 190

Query: 382  NQMKIEGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCAS 561
            +QMK +GL PD  TY+ L++ C+ + NGY+ A +       +G++ D V+YG+++++CAS
Sbjct: 191  DQMKRDGLKPDVITYNTLLAGCIKVKNGYSKAMELVGELPHNGIQMDGVMYGTVLAICAS 250

Query: 562  NGLDKEAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVV 741
            NG  +EAES+ ++MK +G  PN +H SSLLN+Y+ KG+Y+KA++++ EM++ G++PNKV+
Sbjct: 251  NGRCEEAESFIQQMKVKGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSVGIVPNKVM 310

Query: 742  LTSLLKVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMN 921
            +T+LLKVY + GLF ++R L  E+++ GY  +E PYC+++DGL K G+  EA+ +F+EM 
Sbjct: 311  MTTLLKVYIRGGLFERSRELLSELESAGYAENEMPYCMLMDGLSKAGKFEEARSIFDEMK 370

Query: 922  AKGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDMK 1101
             KG++SDGY+ S +I+A  +    +E K+L    E   EK DLV +N +L AY + G+M+
Sbjct: 371  GKGVKSDGYANSIMISALCRSKRFEEAKQLARDSESTYEKCDLVMLNTMLCAYCRAGEME 430

Query: 1102 LIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSILI 1281
             +M+ +KKMD   +SPD  T+  L+ YF KEKL+  A   L DM ++G+++ +  CS LI
Sbjct: 431  SVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTLLDMHSKGHRLEEELCSSLI 490

Query: 1282 KGLAKSGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYISQ 1461
              L K     +AF +Y+ L+ S+  +   LHEK++ IL+  ++LKDAY V+KDN + ISQ
Sbjct: 491  YHLGKIRAHSEAFSVYSMLRYSKRTICKDLHEKILHILIHGKLLKDAYVVVKDNAKMISQ 550

Query: 1462 VSIDKMVIEGFKSGDVHMLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLE 1638
             ++ +       SG+V+++ ++LK    +G+KID     +  S Y  +   K+ L+QLL+
Sbjct: 551  PTLKRFGRAFMNSGNVNLVNDVLKVLHGSGHKIDQVQFEIAISRYISQPDKKELLLQLLQ 610

Query: 1639 WLGKQGYSLPDTVPKSLI 1692
            W+  QGY + D+  ++LI
Sbjct: 611  WMPGQGY-VVDSSTRNLI 627


>ref|XP_003531588.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like [Glycine max]
          Length = 646

 Score =  458 bits (1178), Expect = e-126
 Identities = 230/553 (41%), Positives = 357/553 (64%), Gaps = 2/553 (0%)
 Frame = +1

Query: 40   LQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKTNAASYT 219
            L+  + ++L   L RV + L  + LN  L +F +  ++  + QLF WM E  K +A SY+
Sbjct: 65   LEVRNASDLASALARVGDALTVKDLNAALYHFKKSNKFNHISQLFSWMQENNKLDALSYS 124

Query: 220  TFITLMGKGH-QPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLFNQMKI 396
             +I  M   +    K L+ YH I +++ K+NV VCN++L+CLI   K  +A +LF QMK+
Sbjct: 125  HYIRFMASHNLDAAKMLQLYHSIQNQSAKINVLVCNSVLSCLIKKAKFNSALNLFQQMKL 184

Query: 397  EGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCASNGLDK 576
            +GL PD  TY+ L++ C+ I NGYA A +  +  + + L+ D VIYG+++++CASN   +
Sbjct: 185  DGLLPDLVTYTTLLAGCIKIENGYAKALELIQELQHNKLQMDGVIYGTIMAVCASNTKWE 244

Query: 577  EAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVVLTSLL 756
            EAE YF +MK EG  PN +H SSL+NAY+A GNY+KA+ ++ +M++ GL+PNKV+LT+LL
Sbjct: 245  EAEYYFNQMKDEGHTPNVYHYSSLINAYSACGNYKKADMLIQDMKSEGLVPNKVILTTLL 304

Query: 757  KVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMNAKGIR 936
            KVY K GLF K+R L  E+ +LGY   E PYCI +DGL K G++ EA+ +F+EM    +R
Sbjct: 305  KVYVKGGLFEKSRELLAELKSLGYAEDEMPYCIFMDGLAKAGQIHEAKLIFDEMMKNHVR 364

Query: 937  SDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDMKLIMQT 1116
            SDGY++S +I+A  +    +E K+L +  E    K+DLV +N +L A+ + G+M+ +M+T
Sbjct: 365  SDGYAHSIMISAFCRAKLFREAKQLAKDFETTSNKYDLVILNSMLCAFCRVGEMERVMET 424

Query: 1117 LKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSILIKGLAK 1296
            LKKMD   I+P   T+  L+ YFC+EK+Y  A   +KDM ++G+Q  +  CS LI  L +
Sbjct: 425  LKKMDELAINPGYNTFHILIKYFCREKMYLLAYRTMKDMHSKGHQPVEELCSSLISHLGQ 484

Query: 1297 SGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYISQVSIDK 1476
                 +AF +YN LK S+  +  +LHEK++ ILL+ ++LKDAY V+KDN ++IS+ +  K
Sbjct: 485  VNAYSEAFSVYNMLKYSKRTMCKSLHEKILHILLAGQLLKDAYVVVKDNAKFISRPATKK 544

Query: 1477 MVIEGFKSGDVHMLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLEWLGKQ 1653
                  KSG+++ + ++LK     GYK+D  +  +  S Y  +   KD L+ LL+W+  Q
Sbjct: 545  FASAFMKSGNLNYINDVLKTLHDCGYKLDQDLFAMAVSRYLDQPEKKDLLLHLLQWMAGQ 604

Query: 1654 GYSLPDTVPKSLI 1692
            GY++ D+  ++LI
Sbjct: 605  GYAV-DSSTRNLI 616


>ref|XP_004968981.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like isoform X1 [Setaria italica]
          Length = 645

 Score =  457 bits (1176), Expect = e-126
 Identities = 231/558 (41%), Positives = 359/558 (64%), Gaps = 1/558 (0%)
 Frame = +1

Query: 22   QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKT 201
            +SA+ ++++SS    +  L R  +VLQ Q  N+ LR+ G  +RW ++ ++FEWM E+  T
Sbjct: 58   RSAVAEVKASSDP--VAALNRFEDVLQTQDCNIILRHCGDTRRWDDLSKVFEWMQEREMT 115

Query: 202  NAASYTTFITLMGKGHQPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLF 381
            NAASY+++   +G    P +AL+ Y  I D   +++V VCN++L CL+ N + +++F L+
Sbjct: 116  NAASYSSYFKYLGLSRDPARALQVYGAIQDCTMRVHVSVCNSVLGCLVKNGRFDSSFKLY 175

Query: 382  NQMKIEGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCAS 561
            ++M  EGL+PD +TYS L+S CV +  GY  A       K   L+ D VIYG+L+++CAS
Sbjct: 176  DEMIREGLSPDPFTYSTLLSGCVKLKQGYTKAMGLINEMKSRDLQMDSVIYGTLLAICAS 235

Query: 562  NGLDKEAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVV 741
            +   +EAE YF++MK EG  PN FH SSLLNAY+   +Y KAE ++ ++R++GL PNKV+
Sbjct: 236  HNYCEEAEVYFQKMKDEGHSPNLFHYSSLLNAYSENADYGKAELLMKDLRSSGLTPNKVM 295

Query: 742  LTSLLKVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMN 921
            LT+LLKVY+K G+F KA+ L  E++A G+   E PYCI+IDGLVK G++ EA  +F EM 
Sbjct: 296  LTTLLKVYSKGGIFEKAKDLLAELEASGFAQDEMPYCILIDGLVKGGKIEEANMLFNEMK 355

Query: 922  AKGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDMK 1101
             KG++SDGY++S +I+A  + G  QE K+L +  E +   +DLV +N  L+ Y    DM+
Sbjct: 356  EKGVKSDGYAFSIMISALHRGGHHQESKQLAKEFEAENASYDLVMLNTSLRTYCSTNDME 415

Query: 1102 LIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSILI 1281
             +M+ LKKMD   ISPD  T+  L+ YFC  K+Y  A   ++DM  +G+Q+ +  CS ++
Sbjct: 416  SVMRMLKKMDELNISPDNITFNTLIRYFCNAKVYHLAYKTVEDMHTKGHQLNEELCSHVM 475

Query: 1282 KGLAKSGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYISQ 1461
              L K+G   +AF +YN L+ S+  +  +LHEK + IL+S  +LKDAY V+KDN E IS 
Sbjct: 476  VQLGKAGFPSEAFSVYNMLRYSKRTVRKSLHEKALGILVSSELLKDAYIVVKDNAELISP 535

Query: 1462 VSIDKMVIEGFKSGDVHMLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKDLVQ-LLE 1638
             S++K       SG+++++ +++KA   +G++I   +       Y  K   K L+  LL+
Sbjct: 536  SSLEKFARAFMVSGNINLINDVMKALNRSGWRISQDIFGRAIQRYIQKPDKKHLLLCLLD 595

Query: 1639 WLGKQGYSLPDTVPKSLI 1692
            W+  QGYS+ D+  ++L+
Sbjct: 596  WMTGQGYSV-DSSSRNLL 612


>ref|XP_002889841.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
            lyrata] gi|297335683|gb|EFH66100.1| hypothetical protein
            ARALYDRAFT_888388 [Arabidopsis lyrata subsp. lyrata]
          Length = 665

 Score =  457 bits (1175), Expect = e-126
 Identities = 229/558 (41%), Positives = 368/558 (65%), Gaps = 1/558 (0%)
 Frame = +1

Query: 22   QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQRWLEVLQLFEWMMEQGKT 201
            +SAI ++Q SS  + L +L R+  VL+ Q LN+ LR FG   RW +++QLF+WM + GK 
Sbjct: 74   KSAISEVQRSS--DFLSSLHRLERVLKVQDLNVILRDFGISGRWQDLIQLFDWMQQHGKI 131

Query: 202  NAASYTTFITLMGKGHQPQKALECYHRILDKNTKLNVFVCNALLNCLISNEKVETAFSLF 381
            + ++Y++ I  +G      KALE Y  I D++TK+NV++CN++L+CL+ N K+++   LF
Sbjct: 132  SVSTYSSCIKFVG-AKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLF 190

Query: 382  NQMKIEGLNPDCYTYSMLISACVNISNGYATACDFWESYKKSGLKTDVVIYGSLISLCAS 561
            +QMK  GL PD  TY+ L++ C+ + NGY  A +       +G++ D V+YG+++++CAS
Sbjct: 191  DQMKRGGLKPDVITYNTLLAGCIKVKNGYPKAVELIGELPHNGIQMDSVMYGTVLAICAS 250

Query: 562  NGLDKEAESYFEEMKKEGFPPNEFHLSSLLNAYAAKGNYEKAEKVVDEMRAAGLIPNKVV 741
            NG  +EAE++ ++MK EG  PN +H SSLLN+Y+ KG+Y+KA++++ EM++ GL+PNKV+
Sbjct: 251  NGRCEEAENFIQQMKAEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVM 310

Query: 742  LTSLLKVYAKCGLFIKARSLFREIDALGYPTSETPYCIMIDGLVKHGEVREAQKVFEEMN 921
            +T+LLKVY K GLF ++R L  E+++ GY  +E PYC+++DGL K G++ EA+ +F++M 
Sbjct: 311  MTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMK 370

Query: 922  AKGIRSDGYSYSALIAAHTKMGDIQEVKKLQEGMEKKKEKFDLVTMNVLLKAYIKEGDMK 1101
             KG++SDGY+ S +I+A  +    +E K+L    E   EK DLV +N +L AY + G+M+
Sbjct: 371  GKGVKSDGYANSIMISALCRSKRFEEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEME 430

Query: 1102 LIMQTLKKMDTHKISPDEQTYGALLSYFCKEKLYRFAEGILKDMQARGYQIPKASCSILI 1281
             +M+ +KKMD   I PD  T+  L+ YF KEKL+  A     DM ++G+++ +  CS LI
Sbjct: 431  SVMRMMKKMDEQAIIPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLI 490

Query: 1282 KGLAKSGQAMQAFKLYNQLKSSRNLLSSALHEKMIEILLSERMLKDAYEVLKDNMEYISQ 1461
              L K     +AF +YN L+ S+  +   LHEK++ IL+   +LKDAY V+KDN + ISQ
Sbjct: 491  YHLGKIRAPSEAFSVYNMLRYSKRTICKELHEKILHILIHGDLLKDAYIVVKDNAKMISQ 550

Query: 1462 VSIDKMVIEGFKSGDVHMLINILKAYQSTGYKIDMKVVTVVTSHYYMKGRDKD-LVQLLE 1638
             ++ K       SG+++++ ++LK    +G+KID     +  S Y +    K+ L+QLL+
Sbjct: 551  PTLKKFGRAFMISGNINLVNDVLKVLHGSGHKIDQVQFEIAISRYILLPDKKELLLQLLQ 610

Query: 1639 WLGKQGYSLPDTVPKSLI 1692
            W+  QGY + D+  ++LI
Sbjct: 611  WMPGQGY-IVDSSTRNLI 627