BLASTX nr result
ID: Ephedra26_contig00023149
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00023149
(493 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citr... 62 6e-08
ref|XP_002459173.1| hypothetical protein SORBIDRAFT_03g047260 [S... 60 2e-07
ref|XP_002321639.2| pentatricopeptide repeat-containing family p... 58 1e-06
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus pe... 56 4e-06
ref|XP_004971408.1| PREDICTED: pentatricopeptide repeat-containi... 56 6e-06
gb|AFW83859.1| hypothetical protein ZEAMMB73_953172 [Zea mays] 55 1e-05
gb|ACG29979.1| hypothetical protein [Zea mays] 55 1e-05
ref|NP_001132329.1| uncharacterized protein LOC100193771 [Zea ma... 55 1e-05
>ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Citrus sinensis]
Length = 639
Score = 62.4 bits (150), Expect = 6e-08
Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Frame = +1
Query: 82 KVEEDEEAKYTSNTNQEQEWLDRFKENLH-AHTAMSEKEVLLAFKDLSKYPEKALSLFTW 258
++ D AK + +W D+ + L +S+ VL K+L YP KAL F W
Sbjct: 196 EIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRW 255
Query: 259 YKTHNAYKPTSAVYNALLRTMVGIKDYTDHVWNLIKEIKENGLPIEQATLLLFSARSRGS 438
H+ YK + YN +LR + + D WN+++E+K+ G ++ T + S + +
Sbjct: 256 VGEHSGYKHNTITYNGILRVLARHESVRD-FWNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
Query: 439 DLTKDVAEMYIWMV 480
+ +D +++ +M+
Sbjct: 315 RMMEDAVKLFEFMM 328
>ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citrus clementina]
gi|557542189|gb|ESR53167.1| hypothetical protein
CICLE_v10019266mg [Citrus clementina]
Length = 639
Score = 62.4 bits (150), Expect = 6e-08
Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Frame = +1
Query: 82 KVEEDEEAKYTSNTNQEQEWLDRFKENLH-AHTAMSEKEVLLAFKDLSKYPEKALSLFTW 258
++ D AK + +W D+ + L +S+ VL K+L YP KAL F W
Sbjct: 196 EIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRW 255
Query: 259 YKTHNAYKPTSAVYNALLRTMVGIKDYTDHVWNLIKEIKENGLPIEQATLLLFSARSRGS 438
H+ YK + YN +LR + + D WN+++E+K+ G ++ T + S + +
Sbjct: 256 VGEHSGYKHNTITYNGILRVLARHESVRD-FWNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
Query: 439 DLTKDVAEMYIWMV 480
+ +D +++ +M+
Sbjct: 315 RIMEDAVKLFEFMM 328
>ref|XP_002459173.1| hypothetical protein SORBIDRAFT_03g047260 [Sorghum bicolor]
gi|241931148|gb|EES04293.1| hypothetical protein
SORBIDRAFT_03g047260 [Sorghum bicolor]
Length = 574
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/100 (30%), Positives = 55/100 (55%)
Frame = +1
Query: 181 MSEKEVLLAFKDLSKYPEKALSLFTWYKTHNAYKPTSAVYNALLRTMVGIKDYTDHVWNL 360
++E V+ ++L +YP KAL+ F W + Y +S YNA+ R ++G ++ W+L
Sbjct: 173 LTETTVITVLRELREYPIKALAFFRWAEQQQGYTHSSVAYNAMAR-VLGREESVPEFWDL 231
Query: 361 IKEIKENGLPIEQATLLLFSARSRGSDLTKDVAEMYIWMV 480
I+EIK G+ ++ T L S + + ++ E+Y M+
Sbjct: 232 IQEIKAAGMHVDIDTYLKLSRNFQKRHMVREAVELYELMM 271
>ref|XP_002321639.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550322390|gb|EEF05766.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 486
Score = 57.8 bits (138), Expect = 1e-06
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Frame = +1
Query: 130 EQEWLDRFKENLHA-HTAMSEKEVLLAFKDLSKYPEKALSLFTWYKTHNAYKPTSAVYNA 306
E+EW ++ L +++ V+ K+L YP KAL F W Y+ + YNA
Sbjct: 68 EREWNKEVEKKLVGMRIVLTDNFVIRVLKELRSYPVKALRFFQWVDRREGYQHNTVTYNA 127
Query: 307 LLRTMVGIKDYTDHVWNLIKEIKENGLPIEQATLLLFSARSRGSDLTKDVAEMYIWMV 480
L+R ++G D W+++ E+K G ++ T + S + + L +D +Y +M+
Sbjct: 128 LVR-VLGRDDSIGEFWSVVDEMKNAGYEMDIDTYIKISRQFQKIKLMEDAVRLYEFMM 184
>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Vitis vinifera]
Length = 631
Score = 57.8 bits (138), Expect = 1e-06
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
Frame = +1
Query: 130 EQEWLDRFKENLH-AHTAMSEKEVLLAFKDLSKYPEKALSLFTWYKTHNAYKPTSAVYNA 306
E +W D + L + + ++ + V+ K L K P++ + F W N ++P+SA+Y+
Sbjct: 74 ENDWSDELESELEKSSSVLTHETVIYVLKKLDKDPQRTWNFFNWVTEKNGFRPSSAMYSL 133
Query: 307 LLRTMVGIKDYTDHVWNLIKEIKENGLPIEQAT-LLLFSARSRGSDLTKDVA--EMYIWM 477
+LR++V + W I+++KE G I++ T L + +G +++VA Y M
Sbjct: 134 ILRSLVH-GESMKQFWVTIRKMKEQGFCIDKETYLTILGVFKKGKMASEEVALTHFYNRM 192
Query: 478 VQ 483
VQ
Sbjct: 193 VQ 194
>ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 630
Score = 56.6 bits (135), Expect = 3e-06
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Frame = +1
Query: 94 DEEAKYTSNTNQEQEWLDRFKENL-HAHTAMSEKEVLLAFKDLSKYPEKALSLFTWYKTH 270
DE+ K + EW D+ ++ L +SEK V+ +DL P KAL F W +
Sbjct: 198 DEDVKKVMDVVLGAEWSDKVEKELGEIDVELSEKFVVRVLRDLRVCPLKALRFFRWVEQC 257
Query: 271 NAYKPTSAVYNALLRTMVGIKDYTDHVWNLIKEIKENGLPIEQATLLLFSARSRGSDLTK 450
Y+ S YN + ++G W++I+E+K G ++ T + S + + S + +
Sbjct: 258 AGYEHNSVTYNG-MSLVLGQASSIGEFWSVIEEMKVAGQELDLDTYIKLSRQFQKSKMVE 316
Query: 451 DVAEMYIWMV 480
D ++Y M+
Sbjct: 317 DAVKLYELMM 326
>gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus persica]
Length = 646
Score = 56.2 bits (134), Expect = 4e-06
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = +1
Query: 136 EWLDRFKENL-HAHTAMSEKEVLLAFKDLSKYPEKALSLFTWYKTHNAYKPTSAVYNALL 312
+W + L ++ +++ V+ K L K P+KA F W N +KP+S V+N +L
Sbjct: 93 QWSAELENELSESYPSLTHDAVIYVLKKLDKDPKKAWDFFNWVCEKNGFKPSSLVFNLML 152
Query: 313 RTMVGIKDYTDHVWNLIKEIKENGLPIEQATLLLFSARSRGSDLTKDV 456
++G KD W ++++KE G IE T + R + + DV
Sbjct: 153 -GVLGHKDSMKQFWITLRQMKEQGFYIEVQTYSAIAERLKKGKMDNDV 199
>ref|XP_004971408.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Setaria italica]
Length = 562
Score = 55.8 bits (133), Expect = 6e-06
Identities = 29/100 (29%), Positives = 51/100 (51%)
Frame = +1
Query: 181 MSEKEVLLAFKDLSKYPEKALSLFTWYKTHNAYKPTSAVYNALLRTMVGIKDYTDHVWNL 360
++E V ++L YP KAL+ F W YK S YNA+ R + G ++ W+L
Sbjct: 162 LTETAVAKVLRELRDYPTKALAFFRWAGRQQGYKHGSVAYNAMARAL-GREESVPEFWDL 220
Query: 361 IKEIKENGLPIEQATLLLFSARSRGSDLTKDVAEMYIWMV 480
I+E+K G+ ++ T + S + + ++ E+Y M+
Sbjct: 221 IQEMKAAGVHVDIDTYVKLSRNFQKRHMIREAVELYEHMM 260
>gb|AFW83859.1| hypothetical protein ZEAMMB73_953172 [Zea mays]
Length = 598
Score = 55.1 bits (131), Expect = 1e-05
Identities = 28/100 (28%), Positives = 52/100 (52%)
Frame = +1
Query: 181 MSEKEVLLAFKDLSKYPEKALSLFTWYKTHNAYKPTSAVYNALLRTMVGIKDYTDHVWNL 360
++E V ++L ++P KAL+ F W Y +S YNA+ R ++G ++ W+L
Sbjct: 190 LTETSVTTVLRELREHPIKALAFFRWAGRQQGYTHSSVAYNAMAR-VLGREESVPEFWDL 248
Query: 361 IKEIKENGLPIEQATLLLFSARSRGSDLTKDVAEMYIWMV 480
I+E K G+ ++ T L S + + ++ E+Y M+
Sbjct: 249 IRETKAAGMHVDIDTYLKLSRNFQRRHMVREAVELYELMM 288
>gb|ACG29979.1| hypothetical protein [Zea mays]
Length = 577
Score = 55.1 bits (131), Expect = 1e-05
Identities = 28/100 (28%), Positives = 52/100 (52%)
Frame = +1
Query: 181 MSEKEVLLAFKDLSKYPEKALSLFTWYKTHNAYKPTSAVYNALLRTMVGIKDYTDHVWNL 360
++E V ++L ++P KAL+ F W Y +S YNA+ R ++G ++ W+L
Sbjct: 169 LTETSVTTVLRELREHPIKALAFFRWAGRQQGYTHSSVAYNAMAR-VLGREESVPEFWDL 227
Query: 361 IKEIKENGLPIEQATLLLFSARSRGSDLTKDVAEMYIWMV 480
I+E K G+ ++ T L S + + ++ E+Y M+
Sbjct: 228 IRETKAAGMHVDIDTYLKLSRNFQRRHMVREAVELYELMM 267
>ref|NP_001132329.1| uncharacterized protein LOC100193771 [Zea mays]
gi|194694094|gb|ACF81131.1| unknown [Zea mays]
Length = 502
Score = 55.1 bits (131), Expect = 1e-05
Identities = 28/100 (28%), Positives = 52/100 (52%)
Frame = +1
Query: 181 MSEKEVLLAFKDLSKYPEKALSLFTWYKTHNAYKPTSAVYNALLRTMVGIKDYTDHVWNL 360
++E V ++L ++P KAL+ F W Y +S YNA+ R ++G ++ W+L
Sbjct: 94 LTETSVTTVLRELREHPIKALAFFRWAGRQQGYTHSSVAYNAMAR-VLGREESVPEFWDL 152
Query: 361 IKEIKENGLPIEQATLLLFSARSRGSDLTKDVAEMYIWMV 480
I+E K G+ ++ T L S + + ++ E+Y M+
Sbjct: 153 IRETKAAGMHVDIDTYLKLSRNFQRRHMVREAVELYELMM 192