BLASTX nr result

ID: Ephedra26_contig00023027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00023027
         (767 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                              67   3e-16

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score = 66.6 bits (161), Expect(2) = 3e-16
 Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 17/200 (8%)
 Frame = +1

Query: 217  VVTVHDVLVEIAEKQDKGTRFN--RPDNINRLLQGDLQKEDLEKVKGISLEKVQIEKTIP 390
            V++VHDV++ +  ++ +G RF         + L    ++E+++K+KGI   + +   +I 
Sbjct: 596  VISVHDVILTLGRRKSEGVRFMFISGSQFKKFLDKK-KEEEIQKIKGIWFSENKDLLSIS 654

Query: 391  ATLIDKMHCSLRVLHLASGFSWAYGLHGRCTKKFRNLLYFHGCYP-MPLHAPNLRVVRLL 567
            AT++D MH SLR+L L         + G+C++ F +L++F G  P +P     L  ++ L
Sbjct: 655  ATILDSMHKSLRILRLGK----LTKIEGKCSEIFESLIFFEGEVPGLPFGVKKLMDLKYL 710

Query: 568  --EEEKQQYLE-TKEVTGLNIGDRVHDQ--ELWPQELTE--------ITIIGSLKTFPVN 708
              + +  + LE    +  +    R+H Q  E+  ++L +        +T    LK    N
Sbjct: 711  CYQPKDLKLLEIPHSLRHMEFDGRLHPQVFEISSRDLEQFQNLRILKLTRFAKLKKLSEN 770

Query: 709  LGDL-SQLQCLVLYNCNALK 765
            LGDL + LQ L L  C ++K
Sbjct: 771  LGDLVNGLQELTLSYCKSIK 790



 Score = 45.1 bits (105), Expect(2) = 3e-16
 Identities = 21/52 (40%), Positives = 33/52 (63%)
 Frame = +3

Query: 42  LFAFNTLEYEDKEAFLDISFFFQGWIWKEVERIVGVDAMFRLANRSLVQMKT 197
           LFA++ L  + K+ FLDI  +F+GW W+ V  I+G   +  LA+R+L+   T
Sbjct: 542 LFAYDKLPEDCKDPFLDICSYFEGWDWEIVANIMGGRELKMLADRALITKNT 593


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