BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00022911
         (1966 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006854226.1| hypothetical protein AMTR_s00048p00224070 [A...   856   0.0  
ref|XP_004301675.1| PREDICTED: mediator of RNA polymerase II tra...   840   0.0  
ref|XP_003558758.1| PREDICTED: ATP-dependent DNA helicase Q-like...   838   0.0  
ref|XP_004512366.1| PREDICTED: mediator of RNA polymerase II tra...   837   0.0  
ref|XP_006355238.1| PREDICTED: mediator of RNA polymerase II tra...   836   0.0  
ref|XP_006471562.1| PREDICTED: mediator of RNA polymerase II tra...   835   0.0  
ref|XP_002304389.1| DNA helicase family protein [Populus trichoc...   832   0.0  
ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like...   832   0.0  
emb|CBI29242.3| unnamed protein product [Vitis vinifera]              832   0.0  
ref|NP_001168975.1| uncharacterized protein LOC100382802 [Zea ma...   829   0.0  
ref|XP_003534325.1| PREDICTED: mediator of RNA polymerase II tra...   828   0.0  
ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus commun...   827   0.0  
ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II tra...   825   0.0  
ref|XP_001767449.1| predicted protein [Physcomitrella patens] gi...   822   0.0  
gb|ESW30123.1| hypothetical protein PHAVU_002G126800g [Phaseolus...   820   0.0  
ref|XP_006587645.1| PREDICTED: mediator of RNA polymerase II tra...   816   0.0  
gb|ABA95536.1| ATP-dependent DNA helicase, RecQ family protein, ...   810   0.0  
ref|XP_004980099.1| PREDICTED: mediator of RNA polymerase II tra...   808   0.0  
gb|EOY25441.1| RECQ helicase L2 isoform 2 [Theobroma cacao]           800   0.0  
gb|EOY25440.1| RECQ helicase L2 isoform 1 [Theobroma cacao]           800   0.0  

>ref|XP_006854226.1| hypothetical protein AMTR_s00048p00224070 [Amborella trichopoda]
            gi|548857895|gb|ERN15693.1| hypothetical protein
            AMTR_s00048p00224070 [Amborella trichopoda]
          Length = 713

 Score =  856 bits (2212), Expect = 0.0
 Identities = 422/595 (70%), Positives = 500/595 (84%), Gaps = 1/595 (0%)
 Frame = -3

Query: 1784 EFEIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEACRLTSVDCQDGINLP 1605
            E +I  +L  VE +L+ VQ Q++ L+  Q+KLY+++SEL+ LLEAC+ +       ++ P
Sbjct: 2    EDDILAELLNVEEELEEVQGQIRVLISRQDKLYEKQSELKALLEACQGSESPSNAKVSAP 61

Query: 1604 IDERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAGGGKSL 1425
            +    ENWAGSF+WDKE DD+R NVFGI  YR NQ EIINAVMS +DV+VIMAAGGGKSL
Sbjct: 62   V----ENWAGSFEWDKEVDDIRFNVFGISEYRVNQCEIINAVMSGRDVLVIMAAGGGKSL 117

Query: 1424 CYQLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKSLEKGE 1245
            CYQLPA+LR G ALVVSPLLSLIQDQVMGL++LGIP+ MLTS TSK+ EK IYK+LEKGE
Sbjct: 118  CYQLPAILRNGVALVVSPLLSLIQDQVMGLSALGIPASMLTSNTSKEDEKMIYKALEKGE 177

Query: 1244 GELKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYKNLGIL 1065
            GELK+LYVTPEKISKSKRFMSKLEKC+HAGRL LI++DEAHCCSQWGHDFRPDYKNL IL
Sbjct: 178  GELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLSIL 237

Query: 1064 KIQFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSNAMAVI 885
            K QFP VP+IALTATATQRVQ DL +ML IS+CV FVSTVNRPNLFYEVREKSS A  VI
Sbjct: 238  KTQFPSVPMIALTATATQRVQTDLMEMLHISKCVKFVSTVNRPNLFYEVREKSSAAKVVI 297

Query: 884  DDIAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARERVHLRW 705
            D++  FI  +Y NKESGIVYCF+RKECEQVAKELR+RGILADHYHADMD N RERVHLRW
Sbjct: 298  DEVTDFICGSYPNKESGIVYCFTRKECEQVAKELRERGILADHYHADMDANERERVHLRW 357

Query: 704  SSNKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCLLFYRP 525
            S+N+IQVIVGTVAFGMGINKPDVRFVIHH+LSKS+ETYYQESGRAGRDGLPA CLLF+RP
Sbjct: 358  SNNRIQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPADCLLFFRP 417

Query: 524  ADLPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDNCAFFK 345
             D+PRQSSMVFYE++GLQN+Y I RFCQSK +CRR AFF HFGE LQ+CNGMCDNCA   
Sbjct: 418  GDVPRQSSMVFYENSGLQNLYDIVRFCQSKRSCRRNAFFHHFGEPLQDCNGMCDNCAHPT 477

Query: 344  DIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRK-DVTDLSKDLKKEDVE 168
            + +E+D ++ A  +V+ L+E+Q+NDQRAT+LQLV+  K   R     T    DLK+E++E
Sbjct: 478  ETKEVDASTQAKIIVSLLKEMQENDQRATMLQLVDKLKVNSRGSGGATPTIPDLKREELE 537

Query: 167  QLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRDNR 3
            QLI+QL+LD VLKEEFQHTAY+TNAYV++G   K+L+QG+K+VKL++   +R +R
Sbjct: 538  QLIVQLVLDRVLKEEFQHTAYSTNAYVTIGPLWKQLVQGKKMVKLEISVNSRGSR 592


>ref|XP_004301675.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like [Fragaria vesca subsp. vesca]
          Length = 708

 Score =  840 bits (2170), Expect = 0.0
 Identities = 412/592 (69%), Positives = 499/592 (84%)
 Frame = -3

Query: 1787 DEFEIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEACRLTSVDCQDGINL 1608
            +E  +E++L  VE ++Q VQ Q+K LL+ QE+LY+++SEL+ LL+A    S D    + +
Sbjct: 6    EEALLEEELLNVEVEIQTVQEQIKVLLDQQERLYERQSELQALLQA----SKDSGSPV-I 60

Query: 1607 PIDERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAGGGKS 1428
                  E+W+GSFKWD  ADD+R NVFGI TYR NQ+EIINAVMS +DV+VIMAAGGGKS
Sbjct: 61   GASTAAEDWSGSFKWDSRADDVRFNVFGISTYRANQREIINAVMSGRDVLVIMAAGGGKS 120

Query: 1427 LCYQLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKSLEKG 1248
            LCYQLPA+LR G ALVVSPLLSLIQDQVMGL +LGIP+ MLTS TSK+ EK IYK+LEKG
Sbjct: 121  LCYQLPAILRDGVALVVSPLLSLIQDQVMGLEALGIPAHMLTSTTSKEEEKIIYKALEKG 180

Query: 1247 EGELKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYKNLGI 1068
            EG+LK+LYVTPEKISKSKRFMSKLEKC+HAGRL LI++DEAHCCSQWGHDFRPDYKNLGI
Sbjct: 181  EGDLKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240

Query: 1067 LKIQFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSNAMAV 888
            LK QFP VP+IALTATATQ+VQ+DL +ML I RCV FVSTVNRPNLFY VREKSS    V
Sbjct: 241  LKTQFPNVPVIALTATATQKVQSDLMEMLHIPRCVKFVSTVNRPNLFYMVREKSSVGKVV 300

Query: 887  IDDIAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARERVHLR 708
            +D+IA+FI  +Y++KESGIVYCFSRKECEQVAK+LR+RGI A HYHADMD NARE VH+R
Sbjct: 301  VDEIAEFIRDSYTDKESGIVYCFSRKECEQVAKDLRERGISAHHYHADMDVNARENVHMR 360

Query: 707  WSSNKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCLLFYR 528
            WS +K+QVI+GTVAFGMGINKPDVRFVIHH+LSKS+ETYYQESGRAGRDGLP+ CLL++R
Sbjct: 361  WSKSKLQVIIGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSQCLLYFR 420

Query: 527  PADLPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDNCAFF 348
            PAD+PRQSSMVFYE+ GLQN+Y I R+CQSK  CRR +FFRHF E LQ+CNGMCDNCAF 
Sbjct: 421  PADMPRQSSMVFYENCGLQNLYDIVRYCQSKRQCRRSSFFRHFAEPLQDCNGMCDNCAFS 480

Query: 347  KDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKKEDVE 168
             +++E+DV+ HA  +VT L+++Q+N+QR T+LQLV+  K K + K+V     +LK+E++E
Sbjct: 481  NEVKEVDVSRHAKLMVTLLKDVQENEQRLTVLQLVD--KIKIKHKEV---GSELKREEIE 535

Query: 167  QLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTR 12
            QL+IQLIL  VLKEEFQHTAY+TNAYV+LG  AK++LQG+  VKL++  G +
Sbjct: 536  QLVIQLILGRVLKEEFQHTAYSTNAYVTLGPLAKQVLQGRSSVKLEMSTGQK 587


>ref|XP_003558758.1| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Brachypodium
            distachyon]
          Length = 704

 Score =  838 bits (2165), Expect = 0.0
 Identities = 408/585 (69%), Positives = 492/585 (84%)
 Frame = -3

Query: 1787 DEFEIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEACRLTSVDCQDGINL 1608
            DE  IE++L  VES+L  +Q ++K LL+ QE+LY+++S+L+ LLE  + +    +D  + 
Sbjct: 3    DEENIEEELLLVESELHGLQDKIKMLLDRQEELYERQSQLQALLEISKTS----RDAASS 58

Query: 1607 PIDERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAGGGKS 1428
                 PE+W+G F WD +ADD+R NVFGI +YR NQ+EIIN++MS KDV+VIMAAGGGKS
Sbjct: 59   APSVAPEDWSGKFSWDSQADDIRFNVFGISSYRSNQREIINSIMSGKDVLVIMAAGGGKS 118

Query: 1427 LCYQLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKSLEKG 1248
            LCYQLPA+LR G ALVVSPLLSLIQDQVMGL +LGIP+ MLTS T+K+ EK IYK+LEKG
Sbjct: 119  LCYQLPAVLRDGIALVVSPLLSLIQDQVMGLTALGIPAYMLTSTTNKEVEKLIYKALEKG 178

Query: 1247 EGELKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYKNLGI 1068
            EGELK+LYVTPEKISKSKRFMSKLEKC+HAGRL L+A+DEAHCCSQWGHDFRPDYKNLGI
Sbjct: 179  EGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLVAIDEAHCCSQWGHDFRPDYKNLGI 238

Query: 1067 LKIQFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSNAMAV 888
            LKIQFP VP+IALTATAT +VQ DL +ML I RCV FVSTVNRPNL+Y+V EKSS    V
Sbjct: 239  LKIQFPSVPMIALTATATSKVQMDLIEMLHIPRCVKFVSTVNRPNLYYKVYEKSSVGKVV 298

Query: 887  IDDIAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARERVHLR 708
            ID+IA FI+ +Y NKESGIVYCFSRKECEQVAKELR+RGI AD+YHADMD  ARE+VH+R
Sbjct: 299  IDEIANFITESYPNKESGIVYCFSRKECEQVAKELRERGIAADYYHADMDSVAREKVHMR 358

Query: 707  WSSNKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCLLFYR 528
            WS +K QVIVGTVAFGMGINKPDVRFV+HH+LSKS+ETYYQESGRAGRDGLP+ C+L+YR
Sbjct: 359  WSKSKSQVIVGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRAGRDGLPSECVLYYR 418

Query: 527  PADLPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDNCAFF 348
            P D+PRQSSMVFYE+ GLQN+Y I R+CQSK +CRR AFF+HFGE++QECNGMCDNCA  
Sbjct: 419  PGDVPRQSSMVFYENCGLQNLYDIVRYCQSKKSCRRGAFFQHFGEAVQECNGMCDNCASS 478

Query: 347  KDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKKEDVE 168
             +++++D T H   +V+ LQ++Q NDQRATLLQLV+ +KTK +    ++ + DLKKE++E
Sbjct: 479  IELKDIDATYHTKIIVSLLQDMQHNDQRATLLQLVDKFKTKWKHSGCSNEAVDLKKEEIE 538

Query: 167  QLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKL 33
            QLI+QLI+D VLKEEFQHTAYTTNAYV+LG   K  LQG + VKL
Sbjct: 539  QLIVQLIIDRVLKEEFQHTAYTTNAYVALGPLWKLALQGNRPVKL 583


>ref|XP_004512366.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like [Cicer arietinum]
          Length = 704

 Score =  837 bits (2162), Expect = 0.0
 Identities = 402/587 (68%), Positives = 494/587 (84%)
 Frame = -3

Query: 1787 DEFEIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEACRLTSVDCQDGINL 1608
            +  E+ ++L+ VE++++ VQ Q++ L+E QE+LY++KSEL  +LEAC+ +     +  + 
Sbjct: 3    ENLEVLEELHNVEAEIEDVQEQIRALIEKQERLYERKSELNSILEACKESENQVNNNAS- 61

Query: 1607 PIDERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAGGGKS 1428
                  ENW   F+WD +ADD+RLN+FGI +YR NQ+EIINA+MS +DV+VIMAAGGGKS
Sbjct: 62   --SSTVENWNAPFEWDSKADDLRLNIFGISSYRANQREIINAIMSGRDVLVIMAAGGGKS 119

Query: 1427 LCYQLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKSLEKG 1248
            LCYQLPA+LR G ALVVSPLLSLIQDQVMGL +LGIP+ MLTS TSK+ EK IYK+LEKG
Sbjct: 120  LCYQLPAVLRDGVALVVSPLLSLIQDQVMGLTALGIPAHMLTSTTSKENEKFIYKALEKG 179

Query: 1247 EGELKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYKNLGI 1068
            EGELK+LYVTPEKISKSKRFMSKLEKC+HAGRL LI++DEAHCCSQWGHDFRPDYKNLGI
Sbjct: 180  EGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 239

Query: 1067 LKIQFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSNAMAV 888
            LK QFP VP++ALTATATQRVQ DL +ML I RCV FVSTVNRPNLFY V+EKSS +  V
Sbjct: 240  LKTQFPNVPMVALTATATQRVQNDLIEMLHIRRCVKFVSTVNRPNLFYMVKEKSSVSKVV 299

Query: 887  IDDIAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARERVHLR 708
            +D+IA+FI  +Y N ESGIVYCFSRKECEQVAKELR+RGI ADHYHADMD N RE+VH+R
Sbjct: 300  VDEIAEFIQESYPNHESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNNREKVHMR 359

Query: 707  WSSNKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCLLFYR 528
            WS+NK+QVIVGTVAFGMGINKPDVRFVIHH+LSKS+ETYYQESGRAGRDGLP+ CLL++R
Sbjct: 360  WSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFR 419

Query: 527  PADLPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDNCAFF 348
            P D+ RQSSMVFYE++GLQN+Y I R+CQSK  CRR AFFRHF E LQEC+GMCD CAF 
Sbjct: 420  PGDVSRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQECDGMCDICAFS 479

Query: 347  KDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKKEDVE 168
             +++E+DV+ HA  +V+ LQE+Q +DQR+T+LQLV+  K K +     ++  DLK+E++E
Sbjct: 480  SEVKEVDVSRHAKLMVSLLQEIQTSDQRSTMLQLVDKMKVKQK-----EIGSDLKREEME 534

Query: 167  QLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDL 27
            QLI+ L+LD  LKEEFQHTAY+TNAY+++G  AK++LQG+K VKL++
Sbjct: 535  QLILHLLLDRALKEEFQHTAYSTNAYITVGPLAKQILQGKKTVKLEV 581


>ref|XP_006355238.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like [Solanum tuberosum]
          Length = 706

 Score =  836 bits (2159), Expect = 0.0
 Identities = 407/592 (68%), Positives = 498/592 (84%)
 Frame = -3

Query: 1778 EIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEACRLTSVDCQDGINLPID 1599
            E+ ++L  VE +LQ VQ Q+K LL+ QEKL++++ EL+ L+E+C  +S    D   +P+D
Sbjct: 6    ELLEELVNVEVELQDVQDQIKYLLDRQEKLHERQFELKALVESCESSSGPGSDNAAVPVD 65

Query: 1598 ERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAGGGKSLCY 1419
            +    W+  F+WD +ADD+R NVFGI  YR NQ+EIIN +MS +DV+VIMAAGGGKSLCY
Sbjct: 66   D----WSRPFEWDSQADDIRFNVFGISKYRANQREIINTIMSGRDVLVIMAAGGGKSLCY 121

Query: 1418 QLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKSLEKGEGE 1239
            QLPA+LR G ALVVSPLLSLIQDQVMGL +LGIP+ MLTS T+K+ EK IYK+LEKG  E
Sbjct: 122  QLPAVLRDGVALVVSPLLSLIQDQVMGLAALGIPAFMLTSTTTKENEKFIYKALEKGGDE 181

Query: 1238 LKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYKNLGILKI 1059
            LK+LYVTPEKISKSKRFMSKLEKC+HAGRL LI++DEAHCCSQWGHDFRPDYKNLGILK 
Sbjct: 182  LKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 241

Query: 1058 QFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSNAMAVIDD 879
            QFP VP++ALTATAT++VQ DL +ML I RCV FVS+VNRPNL+Y VREKSS A  V+D+
Sbjct: 242  QFPNVPMVALTATATKKVQDDLMEMLHIPRCVKFVSSVNRPNLYYMVREKSSIAKTVVDE 301

Query: 878  IAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARERVHLRWSS 699
            IA++I  +Y N ESGIVYCFSRKECEQVA+ELR+RGI ADHYHADMD NARERVHLRWS+
Sbjct: 302  IAEYIRTSYPNNESGIVYCFSRKECEQVAQELRERGISADHYHADMDVNARERVHLRWSN 361

Query: 698  NKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCLLFYRPAD 519
             K+QVIVGTVAFGMGINKPDVRFV+HH+LSKS+ETYYQESGRAGRDGLP+ C+LF+RPAD
Sbjct: 362  GKLQVIVGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRAGRDGLPSECVLFFRPAD 421

Query: 518  LPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDNCAFFKDI 339
             PRQSSMVFYE++GL+N+Y I R+CQSK  CRR AFFRHF E LQECNGMCDNCAF  ++
Sbjct: 422  APRQSSMVFYENSGLKNLYDIVRYCQSKRECRRSAFFRHFAEPLQECNGMCDNCAFSNEV 481

Query: 338  EEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKKEDVEQLI 159
            EE+DV+SHA  +V+ L+++Q+NDQR T+LQLVE  K K +     +L  DLKK+++EQL+
Sbjct: 482  EELDVSSHAKLIVSMLKDIQENDQRVTMLQLVEKLKVKQK-----NLGPDLKKDELEQLV 536

Query: 158  IQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRDNR 3
            I+L+LD+VLKEEFQHTAY TNAYV++G  AK++LQG KI+K+++   TR +R
Sbjct: 537  IKLVLDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVEM--STRQSR 586


>ref|XP_006471562.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like isoform X1 [Citrus sinensis]
          Length = 715

 Score =  835 bits (2157), Expect = 0.0
 Identities = 409/602 (67%), Positives = 502/602 (83%), Gaps = 6/602 (0%)
 Frame = -3

Query: 1790 MDEFEIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEA---CRLTSVDCQD 1620
            M+  EI Q+L  VE+++++VQ Q+K+L++ Q++LY+++SEL+ LLEA    R + +    
Sbjct: 1    METEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGG 60

Query: 1619 GINLPIDERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAG 1440
              +  +    ENW+G+F+WD  ADD+RLNVFGIP YR NQ+EIINAV+S +DV+VIMAAG
Sbjct: 61   SSSTAV----ENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAG 116

Query: 1439 GGKSLCYQLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKS 1260
            GGKSLCYQLPA+LR G ALVVSPLLSLIQDQVM L +LGIP+ MLTS TSK+ EK IYK+
Sbjct: 117  GGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKA 176

Query: 1259 LEKGEGELKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYK 1080
            LEKGEGELK+LYVTPEKISKSKRFMSKLEKC+HAGRL LI++DEAHCCSQWGHDFRPDYK
Sbjct: 177  LEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYK 236

Query: 1079 NLGILKIQFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSN 900
            NLGILK QFP VP++ALTATATQ+VQ DL +ML I +C+ FVST+NRPNLFY VREKSS 
Sbjct: 237  NLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSV 296

Query: 899  AMAVIDDIAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARER 720
               VID+IA++I  +Y N ESGIVYCFSRKECEQVA+ELRQRGI AD+YHADMD NARE+
Sbjct: 297  GKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREK 356

Query: 719  VHLRWSSNKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCL 540
            VH+RWS NK+QVIVGTVAFGMGINKPDVRFVIHH+LSKS+ETYYQESGRAGRDGLP+ CL
Sbjct: 357  VHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECL 416

Query: 539  LFYRPADLPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDN 360
            LF+RPAD+PRQSSMVFYE++GLQN+Y I R+ QSK  CRR  FFRHF E LQ+CNGMCD 
Sbjct: 417  LFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQSKKQCRRSTFFRHFAEPLQDCNGMCDI 476

Query: 359  CAFFKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 180
            CAF  ++ E+DVT HA  +++ LQ++QDN+QR T+LQLV+  K K +     ++  DLK+
Sbjct: 477  CAFSYEVNEVDVTRHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLK-----EIDSDLKR 531

Query: 179  EDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLC---KGTRD 9
            E++EQL++QLI+D VL EEFQHTAY+TNAYV++G  AK +LQG+KI+KL++    K T D
Sbjct: 532  EEIEQLVLQLIIDRVLSEEFQHTAYSTNAYVTIGPLAKLVLQGKKIIKLEISSVQKNTAD 591

Query: 8    NR 3
            N+
Sbjct: 592  NK 593


>ref|XP_002304389.1| DNA helicase family protein [Populus trichocarpa]
            gi|222841821|gb|EEE79368.1| DNA helicase family protein
            [Populus trichocarpa]
          Length = 718

 Score =  832 bits (2150), Expect = 0.0
 Identities = 403/586 (68%), Positives = 491/586 (83%)
 Frame = -3

Query: 1784 EFEIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEACRLTSVDCQDGINLP 1605
            E ++ ++L  +E++++ VQ Q+K LLE QEKL++++SEL+ LLEA + +        N  
Sbjct: 4    EADVLEELLNIETEIEDVQDQIKLLLERQEKLHERQSELKFLLEAYKASGTGNSANENAS 63

Query: 1604 IDERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAGGGKSL 1425
                 E+W+GSF+WD +ADD+RLN+FGIP+YR+NQKEIINA+MS +DV+VIMAAGGGKSL
Sbjct: 64   RSSSLEDWSGSFEWDSQADDVRLNIFGIPSYRQNQKEIINAIMSGRDVLVIMAAGGGKSL 123

Query: 1424 CYQLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKSLEKGE 1245
            CYQLPA+LR G ALV+SPLLSLIQDQVMGL +LGIP+ MLTS TSK+ EK IYK+LEKGE
Sbjct: 124  CYQLPAILRDGVALVISPLLSLIQDQVMGLTALGIPAFMLTSTTSKENEKFIYKALEKGE 183

Query: 1244 GELKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYKNLGIL 1065
            GELK+LYVTPEKISKSKRFMSKLEKC++AGRL LI++DEAHCCSQWGHDFRPDYK+L IL
Sbjct: 184  GELKILYVTPEKISKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKSLSIL 243

Query: 1064 KIQFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSNAMAVI 885
            K QF  VP++ALTATATQ+VQ D+ +ML+I +CV FVSTVNRPNLFY VR KSS    V+
Sbjct: 244  KTQFSNVPVVALTATATQKVQYDVMEMLRIPKCVKFVSTVNRPNLFYTVRSKSSVGKVVV 303

Query: 884  DDIAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARERVHLRW 705
            D+IA+FI  +YSN ESGIVYCFSRKECEQVA ELR+RGI AD+YHADMD NARE+VH  W
Sbjct: 304  DEIAEFIQESYSNSESGIVYCFSRKECEQVAAELRERGIAADYYHADMDVNAREKVHTWW 363

Query: 704  SSNKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCLLFYRP 525
            S NK+QVIVGTVAFGMGINKPDVRFVIHH+LSKS+ETYYQESGRAGRDGLP+ C+LFYRP
Sbjct: 364  SKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLFYRP 423

Query: 524  ADLPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDNCAFFK 345
            AD+PRQSSMVFYE++GLQN+Y I R+CQSK  CRR AFFRHF E LQ+CNGMCDNCAF  
Sbjct: 424  ADVPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRNAFFRHFAEPLQDCNGMCDNCAFLS 483

Query: 344  DIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKKEDVEQ 165
            ++ E+DV+ HA  +V+ LQ+ Q+ DQR T+LQLV+  K K       +L  D+KKE++EQ
Sbjct: 484  EVMEVDVSRHAKVMVSLLQDTQEKDQRLTMLQLVDKMKNK------KELGSDIKKEEMEQ 537

Query: 164  LIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDL 27
            L+IQLILD V KEE+QHTAY TNAYV++G  A ++LQG+KIVKL++
Sbjct: 538  LVIQLILDFVFKEEYQHTAYATNAYVTIGPLANQVLQGKKIVKLEI 583


>ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Vitis vinifera]
          Length = 711

 Score =  832 bits (2148), Expect = 0.0
 Identities = 402/585 (68%), Positives = 495/585 (84%)
 Frame = -3

Query: 1781 FEIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEACRLTSVDCQDGINLPI 1602
            +++ ++L  VE +LQ VQ Q+K LL+ QEKL++++SEL+ LLEAC+ +    +DG ++ +
Sbjct: 5    YDLLEELFNVELELQDVQDQIKNLLDRQEKLHERQSELKTLLEACKGSGSPVKDGASVAV 64

Query: 1601 DERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAGGGKSLC 1422
                ENW+G F WD +ADD+R N+FGI TYR NQ+EIINAVMS +DV+VIMAAGGGKSLC
Sbjct: 65   ----ENWSGPFDWDAQADDVRFNIFGISTYRANQREIINAVMSGRDVLVIMAAGGGKSLC 120

Query: 1421 YQLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKSLEKGEG 1242
            YQLPA+LR G ALVVSPLLSLIQDQVMGL +LGIP+ MLTS TSK+ EK IYK+LEKG+G
Sbjct: 121  YQLPAILRDGVALVVSPLLSLIQDQVMGLAALGIPAYMLTSTTSKEDEKFIYKALEKGDG 180

Query: 1241 ELKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYKNLGILK 1062
            +LK+LYVTPEKISKSKRF+SKLEKC+H+G L LI++DEAHCCSQWGHDFRPDYKNLGILK
Sbjct: 181  DLKILYVTPEKISKSKRFVSKLEKCHHSGCLSLISIDEAHCCSQWGHDFRPDYKNLGILK 240

Query: 1061 IQFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSNAMAVID 882
             QFP VP++ALTATAT++VQ DL +ML I +C+ FVSTVNRPNLFY VREKSS    VID
Sbjct: 241  TQFPDVPVVALTATATKKVQNDLMEMLHIPKCIKFVSTVNRPNLFYMVREKSSVGRVVID 300

Query: 881  DIAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARERVHLRWS 702
            +IA++I  +Y N ESGIVYCFSRKECEQVAKELR+RGI AD+YHADMD NARERVHLRWS
Sbjct: 301  EIAEYIQESYPNNESGIVYCFSRKECEQVAKELRERGISADYYHADMDVNARERVHLRWS 360

Query: 701  SNKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCLLFYRPA 522
            ++K+QVIVGTVAFGMGINKPDVRFVIHH+LSKS+ETYYQESGRAGRDGLP+ CLL++RP 
Sbjct: 361  NSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPG 420

Query: 521  DLPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDNCAFFKD 342
            D+PRQSSMVFYE++GLQN+Y I ++CQSK  CRR AFFRHF E LQ+CNGMCDNCAF  +
Sbjct: 421  DVPRQSSMVFYENSGLQNLYDIVQYCQSKRECRRNAFFRHFAEPLQDCNGMCDNCAFSTE 480

Query: 341  IEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKKEDVEQL 162
            ++E+DV+  A ++++ LQ++QDNDQR T+LQ+V+  K K +     DL  DL+KE++E L
Sbjct: 481  VKEVDVSCLAKAMISLLQDMQDNDQRLTMLQMVDKMKVKNK-----DLGSDLRKEEIEHL 535

Query: 161  IIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDL 27
            +IQLI D VLKEEFQHTAY TNAYV+LG   K++  G++IVKL++
Sbjct: 536  VIQLIRDRVLKEEFQHTAYATNAYVTLGLLWKQVSHGKRIVKLEI 580


>emb|CBI29242.3| unnamed protein product [Vitis vinifera]
          Length = 710

 Score =  832 bits (2148), Expect = 0.0
 Identities = 402/585 (68%), Positives = 495/585 (84%)
 Frame = -3

Query: 1781 FEIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEACRLTSVDCQDGINLPI 1602
            +++ ++L  VE +LQ VQ Q+K LL+ QEKL++++SEL+ LLEAC+ +    +DG ++ +
Sbjct: 5    YDLLEELFNVELELQDVQDQIKNLLDRQEKLHERQSELKTLLEACKGSGSPVKDGASVAV 64

Query: 1601 DERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAGGGKSLC 1422
                ENW+G F WD +ADD+R N+FGI TYR NQ+EIINAVMS +DV+VIMAAGGGKSLC
Sbjct: 65   ----ENWSGPFDWDAQADDVRFNIFGISTYRANQREIINAVMSGRDVLVIMAAGGGKSLC 120

Query: 1421 YQLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKSLEKGEG 1242
            YQLPA+LR G ALVVSPLLSLIQDQVMGL +LGIP+ MLTS TSK+ EK IYK+LEKG+G
Sbjct: 121  YQLPAILRDGVALVVSPLLSLIQDQVMGLAALGIPAYMLTSTTSKEDEKFIYKALEKGDG 180

Query: 1241 ELKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYKNLGILK 1062
            +LK+LYVTPEKISKSKRF+SKLEKC+H+G L LI++DEAHCCSQWGHDFRPDYKNLGILK
Sbjct: 181  DLKILYVTPEKISKSKRFVSKLEKCHHSGCLSLISIDEAHCCSQWGHDFRPDYKNLGILK 240

Query: 1061 IQFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSNAMAVID 882
             QFP VP++ALTATAT++VQ DL +ML I +C+ FVSTVNRPNLFY VREKSS    VID
Sbjct: 241  TQFPDVPVVALTATATKKVQNDLMEMLHIPKCIKFVSTVNRPNLFYMVREKSSVGRVVID 300

Query: 881  DIAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARERVHLRWS 702
            +IA++I  +Y N ESGIVYCFSRKECEQVAKELR+RGI AD+YHADMD NARERVHLRWS
Sbjct: 301  EIAEYIQESYPNNESGIVYCFSRKECEQVAKELRERGISADYYHADMDVNARERVHLRWS 360

Query: 701  SNKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCLLFYRPA 522
            ++K+QVIVGTVAFGMGINKPDVRFVIHH+LSKS+ETYYQESGRAGRDGLP+ CLL++RP 
Sbjct: 361  NSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPG 420

Query: 521  DLPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDNCAFFKD 342
            D+PRQSSMVFYE++GLQN+Y I ++CQSK  CRR AFFRHF E LQ+CNGMCDNCAF  +
Sbjct: 421  DVPRQSSMVFYENSGLQNLYDIVQYCQSKRECRRNAFFRHFAEPLQDCNGMCDNCAFSTE 480

Query: 341  IEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKKEDVEQL 162
            ++E+DV+  A ++++ LQ++QDNDQR T+LQ+V+  K K +     DL  DL+KE++E L
Sbjct: 481  VKEVDVSCLAKAMISLLQDMQDNDQRLTMLQMVDKMKVKNK-----DLGSDLRKEEIEHL 535

Query: 161  IIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDL 27
            +IQLI D VLKEEFQHTAY TNAYV+LG   K++  G++IVKL++
Sbjct: 536  VIQLIRDRVLKEEFQHTAYATNAYVTLGLLWKQVSHGKRIVKLEI 580


>ref|NP_001168975.1| uncharacterized protein LOC100382802 [Zea mays]
            gi|223974195|gb|ACN31285.1| unknown [Zea mays]
          Length = 710

 Score =  829 bits (2142), Expect = 0.0
 Identities = 410/593 (69%), Positives = 491/593 (82%)
 Frame = -3

Query: 1787 DEFEIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEACRLTSVDCQDGINL 1608
            DE  IE +L  VESQL  +Q Q+K LL+ QE+LY+++++L+ LLEA +LT       IN 
Sbjct: 3    DEENIEGELLLVESQLHDIQGQIKTLLDRQEELYERQAQLKALLEASKLTR---NTTINT 59

Query: 1607 PIDERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAGGGKS 1428
                 PE+W+GSF WD EADD R N+FGI +YR NQ+EIINAVMS +DV+VIMAAGGGKS
Sbjct: 60   S-SVAPEDWSGSFPWDLEADDTRFNIFGISSYRSNQREIINAVMSGRDVLVIMAAGGGKS 118

Query: 1427 LCYQLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKSLEKG 1248
            LCYQLPA+LR G ALVVSPLLSLIQDQVMGL++LGIP+ MLTS T+K+ EK IYK+L+KG
Sbjct: 119  LCYQLPAVLRDGIALVVSPLLSLIQDQVMGLSALGIPAYMLTSTTNKEVEKFIYKTLDKG 178

Query: 1247 EGELKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYKNLGI 1068
            EGELK+LYVTPEKISKSKRFMSKLEKC+HAGRL LIA+DEAHCCSQWGHDFRPDYKNLGI
Sbjct: 179  EGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGI 238

Query: 1067 LKIQFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSNAMAV 888
            LKIQFP VP+IALTATAT +VQ DL +ML I RC+ FVSTVNRPNLFY+V EKS     V
Sbjct: 239  LKIQFPSVPMIALTATATSKVQMDLMEMLHIPRCIKFVSTVNRPNLFYKVSEKSPVGKVV 298

Query: 887  IDDIAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARERVHLR 708
            ID+I +FIS +Y N ESGI+YCFSRKECEQVAKELR+RGI AD+YHADMD   RE++H+R
Sbjct: 299  IDEITKFISESYPNNESGIIYCFSRKECEQVAKELRERGISADYYHADMDIVNREKIHMR 358

Query: 707  WSSNKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCLLFYR 528
            WS  K QVIVGTVAFGMGINKPDVRFVIHH+LSKS+ETYYQESGRAGRDGLP+ C+L+YR
Sbjct: 359  WSKGKSQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILYYR 418

Query: 527  PADLPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDNCAFF 348
            P D+PRQSSMVFYE+ GLQN+Y I R+CQSK +CR  AFFRHFGE  Q+CNGMCDNCA  
Sbjct: 419  PGDVPRQSSMVFYENCGLQNLYDIVRYCQSKRSCRHGAFFRHFGEVPQDCNGMCDNCAST 478

Query: 347  KDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKKEDVE 168
             + +++DVT H   +V+ L ++Q NDQRATLLQLV+ +K+K +     + + DL+KE+VE
Sbjct: 479  IEQKDIDVTYHTKIIVSLLHDMQLNDQRATLLQLVDKFKSKWKGLGSFNEAVDLRKEEVE 538

Query: 167  QLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRD 9
            QLI+ LILDNVLKEEFQHTAY+TNAYV+LG+  K  LQG ++VKL++   ++D
Sbjct: 539  QLIVNLILDNVLKEEFQHTAYSTNAYVTLGALWKPALQGNRVVKLEIAIASKD 591


>ref|XP_003534325.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like isoform X1 [Glycine max]
          Length = 695

 Score =  828 bits (2138), Expect = 0.0
 Identities = 404/588 (68%), Positives = 490/588 (83%)
 Frame = -3

Query: 1790 MDEFEIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEACRLTSVDCQDGIN 1611
            M+  EI ++L  +E ++Q VQ Q++ L+E QE LY++KSEL  +LEAC+ +  +  +  +
Sbjct: 1    MENNEILEELLNIEVEIQDVQEQIRALIERQESLYERKSELSAILEACKESGNEANNAAS 60

Query: 1610 LPIDERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAGGGK 1431
                   ENW+G F+WD EADD+RLNVFGI +YR NQ+EIINA+MS +DV+VIMAAGGGK
Sbjct: 61   ----SAAENWSGEFEWDSEADDVRLNVFGISSYRANQREIINAIMSGRDVLVIMAAGGGK 116

Query: 1430 SLCYQLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKSLEK 1251
            SLCYQLPA+LR G ALVVSPLLSLIQDQVMGL +LGIP+ MLTS T+K  EK IYK+LEK
Sbjct: 117  SLCYQLPAVLRDGIALVVSPLLSLIQDQVMGLTALGIPAYMLTS-TNKGDEKFIYKTLEK 175

Query: 1250 GEGELKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYKNLG 1071
            GEGELK+LYVTPEKISKSKRFMSKLEKC+HAGRL LI++DEAHCCSQWGHDFRPDYK+L 
Sbjct: 176  GEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKSLS 235

Query: 1070 ILKIQFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSNAMA 891
            ILK QFP+VP++ALTATATQRVQ DL +ML I RCV FVSTVNRPNLFY V+EKSS    
Sbjct: 236  ILKTQFPRVPIVALTATATQRVQNDLIEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKV 295

Query: 890  VIDDIAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARERVHL 711
            VID+IA+FI  +Y N ESGIVYCFSRKECEQVAKELR+RGI AD+YHADMD NARE+VH+
Sbjct: 296  VIDEIAEFIQESYPNNESGIVYCFSRKECEQVAKELRERGISADYYHADMDVNAREKVHM 355

Query: 710  RWSSNKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCLLFY 531
            RWS+NK+QVIVGTVAFGMGINKPDVRFVIHH+LSKS+ETYYQESGRAGRDGLP+ CLL++
Sbjct: 356  RWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYF 415

Query: 530  RPADLPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDNCAF 351
            RP D PRQSSMVFYE++GLQN+Y I R+C SK  CRR AFF HF E LQECNGMCD CAF
Sbjct: 416  RPGDAPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRSAFFHHFAEPLQECNGMCDICAF 475

Query: 350  FKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKKEDV 171
              +++E+DV+ HA  +V+ LQ++Q NDQR+T+LQLV+  K K +     +L  +LK+E++
Sbjct: 476  SSEVKEVDVSGHAKLMVSLLQDMQANDQRSTMLQLVDKMKIKQK-----ELGSELKREEI 530

Query: 170  EQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDL 27
            EQLI+ L+L   LKEEFQHT Y TNAY+++GS AK++LQG+K VKL++
Sbjct: 531  EQLILHLLLARFLKEEFQHTPYATNAYIAVGSLAKQILQGKKSVKLEI 578


>ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus communis]
            gi|223540909|gb|EEF42467.1| DNA helicase recq1, putative
            [Ricinus communis]
          Length = 714

 Score =  827 bits (2135), Expect = 0.0
 Identities = 402/587 (68%), Positives = 487/587 (82%)
 Frame = -3

Query: 1787 DEFEIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEACRLTSVDCQDGINL 1608
            +E  + Q+L  VE+++Q VQ +++ LLE QEKL ++KSEL+ +LE C  +S   +   + 
Sbjct: 8    EEILLLQELENVEAEIQDVQEEIQVLLERQEKLNERKSELKAILETC--SSSTRRGAPSS 65

Query: 1607 PIDERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAGGGKS 1428
            P      NW+G F+WD +AD  + +VFGI +YR NQ+EI+NAVMS +DV+VIMAAGGGKS
Sbjct: 66   PTTASDINWSGPFEWDAQADRDKFHVFGITSYRPNQREIVNAVMSGRDVLVIMAAGGGKS 125

Query: 1427 LCYQLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKSLEKG 1248
            LCYQLPA+LR G +LV+SPL+SLIQDQVMGL +LGIP+  LTS TSK+ EK IYK+LEKG
Sbjct: 126  LCYQLPAILRDGVSLVISPLISLIQDQVMGLKALGIPAYKLTSTTSKEDEKFIYKALEKG 185

Query: 1247 EGELKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYKNLGI 1068
            E  LK+LYVTPEK+SKSKRFMSKLEKC+H G L +IA+DEAHCCSQWGHDFRPDYKNLGI
Sbjct: 186  EEMLKILYVTPEKVSKSKRFMSKLEKCHHRGHLSIIAIDEAHCCSQWGHDFRPDYKNLGI 245

Query: 1067 LKIQFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSNAMAV 888
            LKIQFP VP++ALTATATQ+VQ DL +ML I +CV FVSTVNRPNLFY VREKSS    V
Sbjct: 246  LKIQFPNVPVLALTATATQKVQYDLMEMLHIPKCVRFVSTVNRPNLFYMVREKSSVGKVV 305

Query: 887  IDDIAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARERVHLR 708
            ID+IA+FI  +Y N ESGIVYCFSRKECEQVA +LR+RGI AD+YHADMD NARE+VH+R
Sbjct: 306  IDEIAEFIRESYPNNESGIVYCFSRKECEQVAADLRERGISADYYHADMDVNAREKVHMR 365

Query: 707  WSSNKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCLLFYR 528
            WS NK+QVIVGTVAFGMGINKPDVRFVIHH+LSKS+ETYYQESGRAGRDG P+ C+LF+R
Sbjct: 366  WSQNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGAPSECVLFFR 425

Query: 527  PADLPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDNCAFF 348
            P D+PRQSSMVFYE++GLQN+Y I R+CQSK TCRR AFFRHF E LQ+CNGMCDNCAF 
Sbjct: 426  PGDVPRQSSMVFYENSGLQNLYDIVRYCQSKRTCRRSAFFRHFSEPLQDCNGMCDNCAFS 485

Query: 347  KDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKKEDVE 168
             ++ E+DVTSHA ++V+ LQ++ DNDQR T+LQLV+  K K +     +L  DLK+E++E
Sbjct: 486  NEVMEVDVTSHAKTMVSLLQDMHDNDQRLTMLQLVDKVKNKHK-----ELGADLKREEIE 540

Query: 167  QLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDL 27
            QL+IQLILDNV KEEFQHTAY TNAYV  G  AK++LQG+KIVKL++
Sbjct: 541  QLVIQLILDNVFKEEFQHTAYATNAYVKTGPLAKQVLQGRKIVKLEI 587


>ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like [Solanum lycopersicum]
          Length = 708

 Score =  825 bits (2131), Expect = 0.0
 Identities = 406/593 (68%), Positives = 494/593 (83%), Gaps = 1/593 (0%)
 Frame = -3

Query: 1778 EIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEACRLTSVDCQDGINLPID 1599
            E+ ++L  VE +L  VQ Q+K LL+ QEKL++++ EL+ L+E+C  +S    D   +P+D
Sbjct: 6    ELLEELINVEVELLDVQDQIKYLLDRQEKLHERQFELKALVESCESSSGRASDAAAVPVD 65

Query: 1598 ERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAGGGKSLCY 1419
            +    W+  F+WD +ADD+R NVFGI  YR NQ+EIIN +MS +DV+VIMAAGGGKSLCY
Sbjct: 66   D----WSRPFEWDSQADDIRFNVFGISKYRANQREIINTIMSGRDVLVIMAAGGGKSLCY 121

Query: 1418 QLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKSLEKGEGE 1239
            QLPA+LR G ALVVSPLLSLIQDQVMGL +LGIP+ MLTS T+K+ EK IYK+LEKG  E
Sbjct: 122  QLPAVLRDGVALVVSPLLSLIQDQVMGLAALGIPAFMLTSTTTKENEKFIYKALEKGGDE 181

Query: 1238 LKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYKNLGILKI 1059
            LK+LYVTPEKISKSKRFMSKLEKC+HAGRL LI+VDEAHCCSQWGHDFRPDYKNLGILK 
Sbjct: 182  LKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISVDEAHCCSQWGHDFRPDYKNLGILKT 241

Query: 1058 QFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSNAMAVIDD 879
            QFP VP++ALTATAT++VQ DL +ML I RCV FVS+VNRPNL+Y VREKSS A  V+D+
Sbjct: 242  QFPNVPMVALTATATKKVQDDLMEMLHIPRCVKFVSSVNRPNLYYMVREKSSIAKTVVDE 301

Query: 878  IAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARERVHLRWSS 699
            IA++I  +Y N ESGIVYCFSRKECEQVA+ELR+RGI ADHYHADMD NARERVHLRWS+
Sbjct: 302  IAEYIQSSYPNNESGIVYCFSRKECEQVAQELRERGISADHYHADMDVNARERVHLRWSN 361

Query: 698  NKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCLLFYRPAD 519
             K+QVIVGTVAFGMGINKPDVRFV+HH+LSKS+ETYYQESGRAGRDGLP+ C+LF+RPAD
Sbjct: 362  GKLQVIVGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRAGRDGLPSECVLFFRPAD 421

Query: 518  LPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDNCAFFKDI 339
             PRQSSMVFYE++GL+N+Y I R+CQSK  CRR AFFRHF E LQECNGMCDNCAF  ++
Sbjct: 422  APRQSSMVFYENSGLKNLYDIVRYCQSKRECRRSAFFRHFAEPLQECNGMCDNCAFSNEV 481

Query: 338  EEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKKEDVEQLI 159
            EE+DV+SHA  +V+ L+++Q+NDQR T+LQLVE  K K +     +L  DLKK+++EQL+
Sbjct: 482  EELDVSSHAKLIVSMLKDIQENDQRVTMLQLVEKLKVKQK-----NLGPDLKKDELEQLV 536

Query: 158  IQLILDNVL-KEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRDNR 3
            I+L+  +VL KEEFQHTAY TNAYV++G  AK++LQG KI+K++L   TR  R
Sbjct: 537  IKLLRASVLHKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVEL--STRQTR 587


>ref|XP_001767449.1| predicted protein [Physcomitrella patens] gi|162681345|gb|EDQ67773.1|
            predicted protein [Physcomitrella patens]
          Length = 655

 Score =  822 bits (2124), Expect = 0.0
 Identities = 403/583 (69%), Positives = 477/583 (81%)
 Frame = -3

Query: 1784 EFEIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEACRLTSVDCQDGINLP 1605
            E +++QQL  V+ +L  VQ Q++ LL+HQE L +Q++EL+ L+ +CR  +        + 
Sbjct: 2    ESDLKQQLRLVDQELHQVQDQIQSLLQHQESLLEQQAELQQLIASCRYFACPTSKSGGV- 60

Query: 1604 IDERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAGGGKSL 1425
                  NW+GSF+WD  A D+RLN+FGI +YR+NQ EIINAVMS +DVIVIMAAGGGKSL
Sbjct: 61   ------NWSGSFEWDNRAADIRLNLFGIKSYRQNQHEIINAVMSGRDVIVIMAAGGGKSL 114

Query: 1424 CYQLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKSLEKGE 1245
            CYQLPA+LR GTALV+SPLLSLIQDQVMGL +LGI + MLTS T+KD EKSIYKSLEKGE
Sbjct: 115  CYQLPAMLRTGTALVISPLLSLIQDQVMGLTALGISASMLTSTTTKDEEKSIYKSLEKGE 174

Query: 1244 GELKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYKNLGIL 1065
            G+LK+LYVTPEK++KSKRF+SKLEKCNH GRL LIA+DEAHCCSQWGHDFRPDYK LGIL
Sbjct: 175  GDLKILYVTPEKVAKSKRFVSKLEKCNHGGRLSLIAIDEAHCCSQWGHDFRPDYKQLGIL 234

Query: 1064 KIQFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSNAMAVI 885
            K QFP+VP+IALTATAT+RVQ DL++MLQI+RC  FVSTVNRPNLFYEVREK +N  A I
Sbjct: 235  KKQFPRVPMIALTATATERVQTDLREMLQITRCEKFVSTVNRPNLFYEVREKKANGSAAI 294

Query: 884  DDIAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARERVHLRW 705
            DDIA FI   YS KESGIVYCFSRKECEQVA ELR+RGI A HYHADM P  R  VH+RW
Sbjct: 295  DDIASFILDKYSKKESGIVYCFSRKECEQVAAELRKRGISAAHYHADMKPETRSSVHMRW 354

Query: 704  SSNKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCLLFYRP 525
            S+NK+QVIVGTVAFGMGINKPDVRFVIHH+LSKSLETYYQESGRAGRDGLPAHCLL++RP
Sbjct: 355  STNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSLETYYQESGRAGRDGLPAHCLLYFRP 414

Query: 524  ADLPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDNCAFFK 345
            ADLPRQSSMVF E AGL N+Y+I RFCQSK  CRR AFFRHFGE +Q+CNGMCDNCAF K
Sbjct: 415  ADLPRQSSMVFAEMAGLHNLYAICRFCQSKQACRRAAFFRHFGEKIQKCNGMCDNCAFTK 474

Query: 344  DIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKKEDVEQ 165
            ++ + DVT  + SLV+ ++E  D +Q+ T+LQLVE W     R     L+KDL K+DVE+
Sbjct: 475  EVVDTDVTGVSLSLVSMVKESNDVEQKLTILQLVEQW-----RNTDAQLAKDLSKDDVER 529

Query: 164  LIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVK 36
            +I+QLILD +LKEEF HTAY TNAYV+LG+    +++G +  K
Sbjct: 530  VIVQLILDGILKEEFAHTAYATNAYVALGTVKLEIVKGAQSAK 572


>gb|ESW30123.1| hypothetical protein PHAVU_002G126800g [Phaseolus vulgaris]
          Length = 702

 Score =  820 bits (2117), Expect = 0.0
 Identities = 402/588 (68%), Positives = 490/588 (83%)
 Frame = -3

Query: 1790 MDEFEIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEACRLTSVDCQDGIN 1611
            M+  EI ++L  VE ++Q VQ Q++ L+E QE LY++KSEL  +LEAC+ +  +  +  +
Sbjct: 1    MESNEILEELLNVEVEIQDVQEQIRALIERQENLYERKSELSAILEACKESGNEASNVAS 60

Query: 1610 LPIDERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAGGGK 1431
              +    E+W+G+F WD  ADD+RLNVFGI +YR NQ+EIINA+MS +DV+VIMAAGGGK
Sbjct: 61   SAV----EDWSGTFGWDSRADDVRLNVFGISSYRANQREIINAIMSGRDVLVIMAAGGGK 116

Query: 1430 SLCYQLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKSLEK 1251
            SLCYQLPA+LR G ALVVSPLLSLIQDQVMGL +LGIP+ MLTS T+K  EK IYK+LEK
Sbjct: 117  SLCYQLPAVLRDGIALVVSPLLSLIQDQVMGLTALGIPAYMLTS-TNKGDEKFIYKALEK 175

Query: 1250 GEGELKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYKNLG 1071
            GEG+LKVLYVTPEKISKSKRFMSKLEKC+HAGRL LI++DEAHCCSQWGHDFRPDYK+LG
Sbjct: 176  GEGDLKVLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKSLG 235

Query: 1070 ILKIQFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSNAMA 891
            ILK QFP VP++ALTATATQRVQ DL +ML I RCV FVSTVNRPNLFY V+EKSS    
Sbjct: 236  ILKTQFPNVPMVALTATATQRVQNDLTEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKV 295

Query: 890  VIDDIAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARERVHL 711
            VID+IAQFI  +Y N +SGIVYCFSRKECEQVAKELR+R I AD+YHADMD  AR++VH+
Sbjct: 296  VIDEIAQFIQESYPNNKSGIVYCFSRKECEQVAKELRERRISADYYHADMDVIARQKVHM 355

Query: 710  RWSSNKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCLLFY 531
            RWS+NK+QVIVGTVAFGMGINKPDVRFVIHH+LSKS+ETYYQESGRAGRDGLP+ C+L++
Sbjct: 356  RWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILYF 415

Query: 530  RPADLPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDNCAF 351
            RP D+PRQSSMVFYE++GLQN+Y I R+CQSK  CRR AFFRHF E LQECNGMCD CAF
Sbjct: 416  RPGDVPRQSSMVFYENSGLQNLYDIVRYCQSKKQCRRSAFFRHFAEPLQECNGMCDICAF 475

Query: 350  FKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKKEDV 171
             ++++EMDV+ HA  +V+ LQ++Q NDQR+T+LQLV+  K K +++       +LK+ED 
Sbjct: 476  SREVKEMDVSDHAKLMVSLLQDMQVNDQRSTMLQLVDKMKIKQKKQ-----GSELKREDN 530

Query: 170  EQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDL 27
            EQLI+ L+L   LKEEFQHTAY TNAY+++G  AK++LQG+K V L++
Sbjct: 531  EQLILHLLLGRFLKEEFQHTAYATNAYIAVGPLAKQILQGKKSVTLEI 578


>ref|XP_006587645.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like isoform X2 [Glycine max]
          Length = 690

 Score =  816 bits (2107), Expect = 0.0
 Identities = 402/588 (68%), Positives = 487/588 (82%)
 Frame = -3

Query: 1790 MDEFEIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEACRLTSVDCQDGIN 1611
            M+  EI ++L  +E ++Q VQ Q++ L+E QE LY++KSEL  +LEAC+ +  +  +  +
Sbjct: 1    MENNEILEELLNIEVEIQDVQEQIRALIERQESLYERKSELSAILEACKESGNEANNAAS 60

Query: 1610 LPIDERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAGGGK 1431
                   ENW+G F+WD EADD+RLNVFGI +YR NQ+EIINA+MS +DV+VIMAAGGGK
Sbjct: 61   ----SAAENWSGEFEWDSEADDVRLNVFGISSYRANQREIINAIMSGRDVLVIMAAGGGK 116

Query: 1430 SLCYQLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKSLEK 1251
            SLCYQLPA+LR G ALVVSPLLSLIQDQVMGL +LGIP+ MLTS T+K  EK IYK+LEK
Sbjct: 117  SLCYQLPAVLRDGIALVVSPLLSLIQDQVMGLTALGIPAYMLTS-TNKGDEKFIYKTLEK 175

Query: 1250 GEGELKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYKNLG 1071
            GEGELK+LYVTPEKISKSKRFMSKLEKC+HAGRL LI++DEAHCCSQWGHDFRPDYK+L 
Sbjct: 176  GEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKSLS 235

Query: 1070 ILKIQFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSNAMA 891
            ILK QFP+VP++ALTATATQRVQ DL +ML I RCV FVSTVNRPNLFY V+EKSS    
Sbjct: 236  ILKTQFPRVPIVALTATATQRVQNDLIEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKV 295

Query: 890  VIDDIAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARERVHL 711
            VID+IA+FI  +Y N ESGIVYCFSRKECEQVAKELR+RGI AD+YHADMD NARE+VH+
Sbjct: 296  VIDEIAEFIQESYPNNESGIVYCFSRKECEQVAKELRERGISADYYHADMDVNAREKVHM 355

Query: 710  RWSSNKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCLLFY 531
            RWS+NK+QVIVGTVAFGMGINKPDVRFVIHH+LSKS+ETYYQESGRAGRDGLP+ CLL++
Sbjct: 356  RWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYF 415

Query: 530  RPADLPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDNCAF 351
            RP D PRQSSMVFYE++GLQN+Y I     SK  CRR AFF HF E LQECNGMCD CAF
Sbjct: 416  RPGDAPRQSSMVFYENSGLQNLYDI-----SKRQCRRSAFFHHFAEPLQECNGMCDICAF 470

Query: 350  FKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKKEDV 171
              +++E+DV+ HA  +V+ LQ++Q NDQR+T+LQLV+  K K +     +L  +LK+E++
Sbjct: 471  SSEVKEVDVSGHAKLMVSLLQDMQANDQRSTMLQLVDKMKIKQK-----ELGSELKREEI 525

Query: 170  EQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDL 27
            EQLI+ L+L   LKEEFQHT Y TNAY+++GS AK++LQG+K VKL++
Sbjct: 526  EQLILHLLLARFLKEEFQHTPYATNAYIAVGSLAKQILQGKKSVKLEI 573


>gb|ABA95536.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
            sativa Japonica Group]
          Length = 707

 Score =  810 bits (2093), Expect = 0.0
 Identities = 395/593 (66%), Positives = 485/593 (81%)
 Frame = -3

Query: 1787 DEFEIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEACRLTSVDCQDGINL 1608
            +E  I+ +L  V+++L  +Q Q+  L++ QE+LY+++S+L+ +LE  + ++    + IN 
Sbjct: 3    EEDNIQGELLLVQAELDDIQGQISALIDRQEELYERESQLKAMLEVSKASN----NTINN 58

Query: 1607 PIDERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAGGGKS 1428
                 P++W+GSF WD  ADD+R NVFGI +YR+NQ+EIINA+MS +DV+VIMAAGGGKS
Sbjct: 59   TPSVGPKDWSGSFLWDSRADDVRFNVFGISSYRQNQREIINAIMSGRDVLVIMAAGGGKS 118

Query: 1427 LCYQLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKSLEKG 1248
            LCYQLPA+L  G  LVVSPLLSLIQDQVMGL +LGI + ML S T+K+ EK +YK+L+KG
Sbjct: 119  LCYQLPAVLHDGITLVVSPLLSLIQDQVMGLAALGIQAYMLASTTNKEVEKFVYKALDKG 178

Query: 1247 EGELKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYKNLGI 1068
            EGELK+LYVTPEKISKSKRFMSKLEKC+HAGRL LIA+DEAHCCSQWGHDFRPDYKNLGI
Sbjct: 179  EGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGI 238

Query: 1067 LKIQFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSNAMAV 888
            LK+QFP VP+IALTATAT +VQ DL +ML I RCV FVST+NRPNLFY+V EKS     V
Sbjct: 239  LKVQFPSVPMIALTATATNKVQIDLIEMLHIPRCVKFVSTINRPNLFYKVFEKSPVGKVV 298

Query: 887  IDDIAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARERVHLR 708
            ID+IA FIS +Y N ESGIVYCFSRKECEQVAKEL +RGILAD+YHADMD  +RE+VH+R
Sbjct: 299  IDEIANFISESYPNNESGIVYCFSRKECEQVAKELSERGILADYYHADMDVISREKVHMR 358

Query: 707  WSSNKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCLLFYR 528
            WS +K+QVIVGTVAFGMGINKPDVRFVIHH+LSKS+ETYYQESGRAGRDGLP+ C+L+YR
Sbjct: 359  WSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILYYR 418

Query: 527  PADLPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDNCAFF 348
            P D+PRQSSMVFYE+ GLQN+Y I R+CQSK +CRR AFFRHFGE+ Q+CNGMCDNC   
Sbjct: 419  PGDVPRQSSMVFYENCGLQNLYDIVRYCQSKRSCRRGAFFRHFGEAAQDCNGMCDNCTSS 478

Query: 347  KDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKKEDVE 168
             +++E+D T H   +V+ L ++Q NDQRATLLQLV+ +K K +    ++ S DLKKE +E
Sbjct: 479  LELKEIDATHHTKIIVSLLHDIQLNDQRATLLQLVDKFKAKWKDLGCSNESIDLKKEGIE 538

Query: 167  QLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRD 9
            QL++QLILD VLKEEFQHTAY TNAYV+LG   K  LQG + VKL +   ++D
Sbjct: 539  QLVVQLILDRVLKEEFQHTAYATNAYVALGPLWKPALQGNRPVKLSVAFHSQD 591


>ref|XP_004980099.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like isoform X1 [Setaria italica]
            gi|514810609|ref|XP_004980100.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 34-like isoform
            X2 [Setaria italica]
          Length = 712

 Score =  808 bits (2086), Expect = 0.0
 Identities = 403/587 (68%), Positives = 478/587 (81%)
 Frame = -3

Query: 1787 DEFEIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEACRLTSVDCQDGINL 1608
            DE  IE +L  V SQLQ +Q Q++ LL+ QE+LY+++S+L+ LLE  + +        N 
Sbjct: 3    DEENIEDELFLVGSQLQDIQGQIRTLLDRQEELYERQSQLKALLEVSKKSR-------NN 55

Query: 1607 PIDERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAGGGKS 1428
                  E+W+GSF WD +ADD R NVFGI +YR NQ+EIINAVMS KDV+VIMAAGGGKS
Sbjct: 56   STKVTLEDWSGSFPWDSQADDTRFNVFGITSYRSNQREIINAVMSRKDVLVIMAAGGGKS 115

Query: 1427 LCYQLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKSLEKG 1248
            LCYQLPA+L  G ALVVSPLLSLIQDQVMGL +LGI + MLTS T+K+ EK IY++L+KG
Sbjct: 116  LCYQLPAVLHNGIALVVSPLLSLIQDQVMGLAALGIAAYMLTSTTNKEVEKFIYRALDKG 175

Query: 1247 EGELKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYKNLGI 1068
            EGELK+LYVTPEKISKSKRFMSKLEKC++AGRL +IAVDEAHCCSQWGHDFRPDYKNLGI
Sbjct: 176  EGELKILYVTPEKISKSKRFMSKLEKCHNAGRLSVIAVDEAHCCSQWGHDFRPDYKNLGI 235

Query: 1067 LKIQFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSNAMAV 888
            LKIQFP VP+IALTATAT +VQ DL +ML I RCV FVSTVNRPNLFY+V EKS     V
Sbjct: 236  LKIQFPSVPMIALTATATSKVQTDLIEMLHIPRCVKFVSTVNRPNLFYKVHEKSPVGKVV 295

Query: 887  IDDIAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARERVHLR 708
            ID+IA FIS +Y N ESGIVYCFSR+ECEQVAKEL  RGI A+HYHADMD  ARE++H+R
Sbjct: 296  IDEIADFISESYPNNESGIVYCFSRRECEQVAKELCDRGISAEHYHADMDIVAREKIHMR 355

Query: 707  WSSNKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCLLFYR 528
            WS  K QVIVGTVAFGMGINKPDVRFVIHH+LSKS+ETYYQESGRAGRDGLP+ C+L+YR
Sbjct: 356  WSKGKSQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYYR 415

Query: 527  PADLPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDNCAFF 348
            P D+PRQSSMVFYE+ GLQN+Y I R+CQSK +CRR A FRHFGE LQ+CNGMCDNCA  
Sbjct: 416  PGDVPRQSSMVFYENCGLQNLYDIVRYCQSKRSCRRGAIFRHFGEVLQDCNGMCDNCASS 475

Query: 347  KDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKKEDVE 168
             +++E+D T H   +V+ L +LQ N QRATLLQLV+ +K K +    ++   DLK+E++E
Sbjct: 476  IELKEIDATHHTKVVVSVLHDLQLNGQRATLLQLVDKFKAKWKGLGRSNQDVDLKREEIE 535

Query: 167  QLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDL 27
            QLI+QLILD+VLKEEFQHTAY+TNAYV+LG   K  LQG + VKL++
Sbjct: 536  QLIVQLILDHVLKEEFQHTAYSTNAYVTLGPLWKPALQGNRPVKLEI 582


>gb|EOY25441.1| RECQ helicase L2 isoform 2 [Theobroma cacao]
          Length = 668

 Score =  800 bits (2065), Expect = 0.0
 Identities = 387/588 (65%), Positives = 481/588 (81%)
 Frame = -3

Query: 1790 MDEFEIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEACRLTSVDCQDGIN 1611
            M+  EI ++L  VE ++Q V+ Q+  LLE QEKLY+++SEL  LLE C +          
Sbjct: 1    MEAEEIAEELQDVEVEIQDVEDQISALLERQEKLYERQSELTALLETCPVAVKHDSARTT 60

Query: 1610 LPIDERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAGGGK 1431
            + +    E+W+G F WD  ADD+R NVFGI +YR NQ+EIINAVMS +DV+VIMAAGGGK
Sbjct: 61   VQV----EDWSGPFDWDSRADDIRFNVFGISSYRPNQREIINAVMSGRDVLVIMAAGGGK 116

Query: 1430 SLCYQLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKSLEK 1251
            SLCYQLPA+LR G ALVVSPLLSLIQDQVMGL + GIP+ MLTS T+K+ EK IYK+LEK
Sbjct: 117  SLCYQLPAILRQGIALVVSPLLSLIQDQVMGLTASGIPAFMLTSTTNKEDEKFIYKALEK 176

Query: 1250 GEGELKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYKNLG 1071
            GEG++K+LYVTPEKISKSKRFMSKLEKC HA RL LI++DEAHCCSQWGHDFRPDYKNLG
Sbjct: 177  GEGDIKLLYVTPEKISKSKRFMSKLEKCYHAARLSLISIDEAHCCSQWGHDFRPDYKNLG 236

Query: 1070 ILKIQFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSNAMA 891
            ILK QFP VP++ALTATAT +VQ DL +ML++ +C+ FVSTVNRPNLFY VREKSS    
Sbjct: 237  ILKTQFPNVPVVALTATATLKVQNDLMEMLRVPKCLKFVSTVNRPNLFYMVREKSSVGKV 296

Query: 890  VIDDIAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARERVHL 711
            VID+I ++I  +Y N ESGIVYCFSRKECEQVA EL +RGI A +YHADMD NARE+VH+
Sbjct: 297  VIDEITEYIKESYPNNESGIVYCFSRKECEQVASELCERGISAGYYHADMDVNAREKVHM 356

Query: 710  RWSSNKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCLLFY 531
            +WS NK+QVIVGTVAFGMGINKPDVRFVIHH+LSKS+ETYYQESGRAGRDGLP+ CL+F+
Sbjct: 357  KWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLIFF 416

Query: 530  RPADLPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDNCAF 351
            RPAD+PRQSSMVFYE +GLQN+Y I R+CQSK  C R AFF+HF E LQECNGMCD+CAF
Sbjct: 417  RPADVPRQSSMVFYEKSGLQNLYDIVRYCQSKRQCHRGAFFQHFAEPLQECNGMCDSCAF 476

Query: 350  FKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKKEDV 171
              +++E+D +  A  +++ + ++Q+N+QR T+LQLV+  K K ++ D+      LK+E++
Sbjct: 477  SSEVKEVDASCQAKLMISLVHDMQENNQRVTMLQLVDRVKNKQKQLDL-----KLKREEL 531

Query: 170  EQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDL 27
            EQL++QLILD VLKE+FQHTAY TNAY+++G+ A ++LQG+KIVK+++
Sbjct: 532  EQLVVQLILDRVLKEDFQHTAYATNAYITVGTSANQILQGKKIVKMEV 579


>gb|EOY25440.1| RECQ helicase L2 isoform 1 [Theobroma cacao]
          Length = 709

 Score =  800 bits (2065), Expect = 0.0
 Identities = 387/588 (65%), Positives = 481/588 (81%)
 Frame = -3

Query: 1790 MDEFEIEQQLNTVESQLQIVQVQVKELLEHQEKLYQQKSELEGLLEACRLTSVDCQDGIN 1611
            M+  EI ++L  VE ++Q V+ Q+  LLE QEKLY+++SEL  LLE C +          
Sbjct: 1    MEAEEIAEELQDVEVEIQDVEDQISALLERQEKLYERQSELTALLETCPVAVKHDSARTT 60

Query: 1610 LPIDERPENWAGSFKWDKEADDMRLNVFGIPTYRKNQKEIINAVMSEKDVIVIMAAGGGK 1431
            + +    E+W+G F WD  ADD+R NVFGI +YR NQ+EIINAVMS +DV+VIMAAGGGK
Sbjct: 61   VQV----EDWSGPFDWDSRADDIRFNVFGISSYRPNQREIINAVMSGRDVLVIMAAGGGK 116

Query: 1430 SLCYQLPALLRPGTALVVSPLLSLIQDQVMGLNSLGIPSGMLTSITSKDTEKSIYKSLEK 1251
            SLCYQLPA+LR G ALVVSPLLSLIQDQVMGL + GIP+ MLTS T+K+ EK IYK+LEK
Sbjct: 117  SLCYQLPAILRQGIALVVSPLLSLIQDQVMGLTASGIPAFMLTSTTNKEDEKFIYKALEK 176

Query: 1250 GEGELKVLYVTPEKISKSKRFMSKLEKCNHAGRLCLIAVDEAHCCSQWGHDFRPDYKNLG 1071
            GEG++K+LYVTPEKISKSKRFMSKLEKC HA RL LI++DEAHCCSQWGHDFRPDYKNLG
Sbjct: 177  GEGDIKLLYVTPEKISKSKRFMSKLEKCYHAARLSLISIDEAHCCSQWGHDFRPDYKNLG 236

Query: 1070 ILKIQFPKVPLIALTATATQRVQADLKDMLQISRCVTFVSTVNRPNLFYEVREKSSNAMA 891
            ILK QFP VP++ALTATAT +VQ DL +ML++ +C+ FVSTVNRPNLFY VREKSS    
Sbjct: 237  ILKTQFPNVPVVALTATATLKVQNDLMEMLRVPKCLKFVSTVNRPNLFYMVREKSSVGKV 296

Query: 890  VIDDIAQFISHAYSNKESGIVYCFSRKECEQVAKELRQRGILADHYHADMDPNARERVHL 711
            VID+I ++I  +Y N ESGIVYCFSRKECEQVA EL +RGI A +YHADMD NARE+VH+
Sbjct: 297  VIDEITEYIKESYPNNESGIVYCFSRKECEQVASELCERGISAGYYHADMDVNAREKVHM 356

Query: 710  RWSSNKIQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPAHCLLFY 531
            +WS NK+QVIVGTVAFGMGINKPDVRFVIHH+LSKS+ETYYQESGRAGRDGLP+ CL+F+
Sbjct: 357  KWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLIFF 416

Query: 530  RPADLPRQSSMVFYEHAGLQNVYSIARFCQSKSTCRRIAFFRHFGESLQECNGMCDNCAF 351
            RPAD+PRQSSMVFYE +GLQN+Y I R+CQSK  C R AFF+HF E LQECNGMCD+CAF
Sbjct: 417  RPADVPRQSSMVFYEKSGLQNLYDIVRYCQSKRQCHRGAFFQHFAEPLQECNGMCDSCAF 476

Query: 350  FKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKKEDV 171
              +++E+D +  A  +++ + ++Q+N+QR T+LQLV+  K K ++ D+      LK+E++
Sbjct: 477  SSEVKEVDASCQAKLMISLVHDMQENNQRVTMLQLVDRVKNKQKQLDL-----KLKREEL 531

Query: 170  EQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDL 27
            EQL++QLILD VLKE+FQHTAY TNAY+++G+ A ++LQG+KIVK+++
Sbjct: 532  EQLVVQLILDRVLKEDFQHTAYATNAYITVGTSANQILQGKKIVKMEV 579