BLASTX nr result
ID: Ephedra26_contig00022764
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00022764
(1475 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR18382.1| unknown [Picea sitchensis] 337 1e-89
ref|XP_006855276.1| hypothetical protein AMTR_s00057p00025150 [A... 271 5e-70
gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana] 266 2e-68
ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thalian... 266 2e-68
ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [... 265 4e-68
ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like... 264 6e-68
ref|XP_002894642.1| pseudouridine synthase family protein [Arabi... 263 1e-67
gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis] 262 2e-67
gb|EMJ06787.1| hypothetical protein PRUPE_ppa008866mg [Prunus pe... 262 2e-67
ref|NP_001067018.1| Os12g0560500 [Oryza sativa Japonica Group] g... 262 2e-67
gb|EEE53427.1| hypothetical protein OsJ_36505 [Oryza sativa Japo... 262 2e-67
ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citr... 261 4e-67
ref|XP_003579309.1| PREDICTED: RNA pseudourine synthase 1-like [... 261 5e-67
ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like... 260 9e-67
gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis] 259 2e-66
tpg|DAA55259.1| TPA: hypothetical protein ZEAMMB73_192305 [Zea m... 259 3e-66
gb|ACN26382.1| unknown [Zea mays] 259 3e-66
ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [... 258 5e-66
ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutr... 258 6e-66
ref|XP_004962774.1| PREDICTED: RNA pseudouridine synthase 1-like... 256 2e-65
>gb|ABR18382.1| unknown [Picea sitchensis]
Length = 358
Score = 337 bits (863), Expect = 1e-89
Identities = 176/337 (52%), Positives = 219/337 (64%), Gaps = 13/337 (3%)
Frame = +3
Query: 15 EYPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXXX 194
++PKPLS P PE SRQVE DRA RAEAA AG ALSR+ F+YED+ +AVNKP GVY
Sbjct: 25 DFPKPLSQPPPELSRQVEYDRAMRAEAAVKAGPALSRNEFIYEDEWMIAVNKPSGVYCEH 84
Query: 195 XXXXXXXXXXXXXXXXXXXXXXXX-------RLDRDTSGVMIITKQHKIAAKFVKAYTER 353
RLDRDTSGVM+ITK HKIA + VKA+T+R
Sbjct: 85 VLSSIPELLASSPSSAGAANDVNPLELHLANRLDRDTSGVMVITKLHKIAGQLVKAFTDR 144
Query: 354 RICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLN 533
++ KTYLALCI P+P WN+IYIESGHGRSK+GAWR YS+ DVG++LPGG+ VR+M+T L
Sbjct: 145 KVRKTYLALCIGPAPKWNNIYIESGHGRSKFGAWRVYSRTDVGRILPGGTVVREMATHLK 204
Query: 534 VLSINGFPKTTTDAIHDSDTFLQSINLTAATLKNP------DKTILDGMNQVVATEQLET 695
VL++N + D++ + Q I A LK D D + +VV TEQ
Sbjct: 205 VLAVNANHRMHRDSVDKAQNSSQGI---AFDLKEDRFATVGDNGSTDSIEKVVVTEQNSK 261
Query: 696 GLGLQPSDMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDD 875
G +S P+ KND VL+RA PL+GRTHQIRLHCQY LPIRGD KY G WK
Sbjct: 262 APGQDRDIVSSPNIRKNDEVLIRASPLSGRTHQIRLHCQYMGLPIRGDVKYEGPHIWKGI 321
Query: 876 TFESHALHAETVCFEHPVTGNLVKLHAPLPEWALKSF 986
T+ +HALHAE++CFEHPVT N+VK HAPLP+W ++++
Sbjct: 322 TYANHALHAESLCFEHPVTNNMVKFHAPLPQWVMEAY 358
>ref|XP_006855276.1| hypothetical protein AMTR_s00057p00025150 [Amborella trichopoda]
gi|548859042|gb|ERN16743.1| hypothetical protein
AMTR_s00057p00025150 [Amborella trichopoda]
Length = 326
Score = 271 bits (693), Expect = 5e-70
Identities = 147/334 (44%), Positives = 194/334 (58%), Gaps = 4/334 (1%)
Frame = +3
Query: 12 VEYPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXX 191
+++P PL+ P S+QVELDRA A A S G ++++ +YED +A+NKP GVY
Sbjct: 28 LDFPIPLTRHPPPISKQVELDRAMAASAKS--GFSITKSDVIYEDQWLIAINKPSGVYCD 85
Query: 192 XXXXXXXXXXXXXXXXXXXXXXXXX----RLDRDTSGVMIITKQHKIAAKFVKAYTERRI 359
RLDRDTSGVM+ITK HK+A K V+A+TE R+
Sbjct: 86 HVLASIPRLLGVSPESSGAENPLELHLGNRLDRDTSGVMLITKLHKVAGKLVQAFTEHRV 145
Query: 360 CKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVL 539
KTY+ALCI +P W I ++SGHGRSK+GAWR YS +D+G+ LPGGS VR+M T VL
Sbjct: 146 KKTYIALCIGLAPQWEEIALKSGHGRSKFGAWRVYSASDIGRTLPGGSVVREMVTSFKVL 205
Query: 540 SINGFPKTTTDAIHDSDTFLQSINLTAATLKNPDKTILDGMNQVVATEQLETGLGLQPSD 719
S+NG D I + L +V E S
Sbjct: 206 SVNGLSSENIDFIEKRNEML-----------------------IVRDE---------GSK 233
Query: 720 MSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDDTFESHALH 899
+S D K++I L+RAYP +GRTHQIRLHCQY +P+RGD KY G WK+ T++ HALH
Sbjct: 234 ISSTHDAKDEI-LIRAYPQSGRTHQIRLHCQYLGIPLRGDVKYEGPHEWKEKTYDYHALH 292
Query: 900 AETVCFEHPVTGNLVKLHAPLPEWALKSFNCTVG 1001
AE + F+HPVTG+L++ HAPLP WA ++ +CT G
Sbjct: 293 AENLSFDHPVTGSLMEFHAPLPSWAREALSCTKG 326
>gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana]
Length = 293
Score = 266 bits (680), Expect = 2e-68
Identities = 146/321 (45%), Positives = 188/321 (58%)
Frame = +3
Query: 12 VEYPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXX 191
+ YPKP+S P P S+ +EL RA A + SS + L+RD LYED+ +AVNKP GVY
Sbjct: 9 LNYPKPISAPPPPISKDIELRRAMEASSKSSLFN-LTRDDILYEDEYLMAVNKPKGVYCE 67
Query: 192 XXXXXXXXXXXXXXXXXXXXXXXXXRLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTY 371
RLDRDTSGVMIITK HK+AAK VKA+TE +I K+Y
Sbjct: 68 AVLRSAPQIVLDSSSEYHLAN----RLDRDTSGVMIITKSHKVAAKLVKAFTEHKIRKSY 123
Query: 372 LALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSING 551
+ALCI SP W + + SGHGRSK+GAWR Y+ DVG+VLPGGS VRDM T V+S+N
Sbjct: 124 IALCIGSSPNWRRVTVSSGHGRSKHGAWRVYAALDVGRVLPGGSFVRDMETTFEVVSVN- 182
Query: 552 FPKTTTDAIHDSDTFLQSINLTAATLKNPDKTILDGMNQVVATEQLETGLGLQPSDMSMP 731
++KN + L+ +N V+ E ++S
Sbjct: 183 ------------------------SVKN-ESCELEDVNHVIVAE--------GERELSCG 209
Query: 732 SDEKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDDTFESHALHAETV 911
D+ + +V++RA+P +GRTHQIRLHCQY +PIRGD KY GV W TFE H LHAE +
Sbjct: 210 GDDDDVVVVVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYHGVYEWNGRTFEGHELHAECL 269
Query: 912 CFEHPVTGNLVKLHAPLPEWA 974
+HPVTG+ + + APLP WA
Sbjct: 270 SLDHPVTGDSIVIRAPLPYWA 290
>ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thaliana]
gi|75140931|sp|Q7XA65.1|PUS1_ARATH RecName: Full=RNA
pseudouridine synthase 1; AltName: Full=RNA
pseudouridylate synthase 1; AltName: Full=RNA-uridine
isomerase 1 gi|33589806|gb|AAQ22669.1| At1g56345
[Arabidopsis thaliana] gi|110736414|dbj|BAF00174.1|
hypothetical protein [Arabidopsis thaliana]
gi|332195260|gb|AEE33381.1| RNA pseudourine synthase 1
[Arabidopsis thaliana]
Length = 322
Score = 266 bits (680), Expect = 2e-68
Identities = 146/321 (45%), Positives = 188/321 (58%)
Frame = +3
Query: 12 VEYPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXX 191
+ YPKP+S P P S+ +EL RA A + SS + L+RD LYED+ +AVNKP GVY
Sbjct: 38 LNYPKPISAPPPPISKDIELRRAMEASSKSSLFN-LTRDDILYEDEYLMAVNKPKGVYCE 96
Query: 192 XXXXXXXXXXXXXXXXXXXXXXXXXRLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTY 371
RLDRDTSGVMIITK HK+AAK VKA+TE +I K+Y
Sbjct: 97 AVLRSAPQIVLDSSSEYHLAN----RLDRDTSGVMIITKSHKVAAKLVKAFTEHKIRKSY 152
Query: 372 LALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSING 551
+ALCI SP W + + SGHGRSK+GAWR Y+ DVG+VLPGGS VRDM T V+S+N
Sbjct: 153 IALCIGSSPNWRRVTVSSGHGRSKHGAWRVYAALDVGRVLPGGSFVRDMETTFEVVSVN- 211
Query: 552 FPKTTTDAIHDSDTFLQSINLTAATLKNPDKTILDGMNQVVATEQLETGLGLQPSDMSMP 731
++KN + L+ +N V+ E ++S
Sbjct: 212 ------------------------SVKN-ESCELEDVNHVIVAE--------GERELSCG 238
Query: 732 SDEKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDDTFESHALHAETV 911
D+ + +V++RA+P +GRTHQIRLHCQY +PIRGD KY GV W TFE H LHAE +
Sbjct: 239 GDDDDVVVVVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYHGVYEWNGRTFEGHELHAECL 298
Query: 912 CFEHPVTGNLVKLHAPLPEWA 974
+HPVTG+ + + APLP WA
Sbjct: 299 SLDHPVTGDSIVIRAPLPYWA 319
>ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [Solanum lycopersicum]
Length = 308
Score = 265 bits (677), Expect = 4e-68
Identities = 144/324 (44%), Positives = 188/324 (58%), Gaps = 2/324 (0%)
Frame = +3
Query: 15 EYPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXXX 194
+YP PLSPP P S+ +E +RA A ++ SA +LSR H ++ED+ +AVNKP G+Y
Sbjct: 16 DYPVPLSPPLPTLSKDIEPNRALTA-SSKSALFSLSRSHVIFEDEWIIAVNKPQGIYCES 74
Query: 195 XXXXXXXXXXXXXXXXXXXXXXXXRLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTYL 374
RLDRDTSGVM+ITK HK+AAKFVKA+T+ ++ KTYL
Sbjct: 75 VLSSLPDLLNDTGANVSELHLAN-RLDRDTSGVMLITKLHKVAAKFVKAFTDHKVRKTYL 133
Query: 375 ALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSINGF 554
A C+ +P W I ++SGHGRSKYGAWR Y+ +D G+ LPGGS V+DM T VLS+NG
Sbjct: 134 AYCVGLAPKWEKITVKSGHGRSKYGAWRVYAASDAGRKLPGGSLVKDMETSFEVLSVNGL 193
Query: 555 P--KTTTDAIHDSDTFLQSINLTAATLKNPDKTILDGMNQVVATEQLETGLGLQPSDMSM 728
K +D D D V+ E+ G
Sbjct: 194 GCFKEVSDLHKDEDI-------------------------VIVQEKSVIG---------- 218
Query: 729 PSDEKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDDTFESHALHAET 908
D K D +L+RA P +GRTHQIRLHCQY +PIRGD +Y GV WK + ++SH LHAE+
Sbjct: 219 -CDLKKDEILVRASPRSGRTHQIRLHCQYLGIPIRGDVRYEGVYEWKGNIYDSHELHAES 277
Query: 909 VCFEHPVTGNLVKLHAPLPEWALK 980
+ FEHP+TG + L APLP WA++
Sbjct: 278 LSFEHPITGKSMLLQAPLPSWAIQ 301
>ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like [Solanum tuberosum]
Length = 332
Score = 264 bits (675), Expect = 6e-68
Identities = 144/324 (44%), Positives = 187/324 (57%), Gaps = 2/324 (0%)
Frame = +3
Query: 15 EYPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXXX 194
+YP PLSPP P S+ +E +RA A ++ SA +LSR H ++ED+ +AVNKP G+Y
Sbjct: 46 DYPVPLSPPLPALSKDIEPNRALTA-SSKSALFSLSRSHVIFEDEWIIAVNKPQGIYCES 104
Query: 195 XXXXXXXXXXXXXXXXXXXXXXXXRLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTYL 374
RLDRDTSGVM+ITK HK+AAKFVKA+T+ ++ KTYL
Sbjct: 105 VLSSLPDLLNDTGANVSELHLAN-RLDRDTSGVMLITKLHKVAAKFVKAFTDHKVRKTYL 163
Query: 375 ALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSINGF 554
A C+ +P W I ++SGHGRSKYGAWR Y+ +D G+ LPGGS V+DM T VLS+NG
Sbjct: 164 AYCVGLAPKWEKITVKSGHGRSKYGAWRVYAASDAGRKLPGGSLVKDMETSFEVLSVNGL 223
Query: 555 P--KTTTDAIHDSDTFLQSINLTAATLKNPDKTILDGMNQVVATEQLETGLGLQPSDMSM 728
K +D D D V+ E+ G
Sbjct: 224 GCFKEVSDFHKDEDV-------------------------VIVQEKSVIG---------- 248
Query: 729 PSDEKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDDTFESHALHAET 908
D K D +L+RA P +GRTHQIRLHCQY +PIRGD +Y GV WK ++SH LHAE+
Sbjct: 249 -CDLKKDEILVRASPRSGRTHQIRLHCQYLGIPIRGDVRYEGVYEWKGSRYDSHELHAES 307
Query: 909 VCFEHPVTGNLVKLHAPLPEWALK 980
+ FEHP+TG + L APLP WA++
Sbjct: 308 LSFEHPITGKPMLLQAPLPSWAIQ 331
>ref|XP_002894642.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
lyrata] gi|297340484|gb|EFH70901.1| pseudouridine
synthase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 321
Score = 263 bits (673), Expect = 1e-67
Identities = 145/327 (44%), Positives = 187/327 (57%)
Frame = +3
Query: 12 VEYPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXX 191
+ YPKP+SPP P S+ +EL RA A + SS + L+RDH LYED+ +AVNKP GVY
Sbjct: 38 LHYPKPISPPPPPISKDIELRRAMEASSKSSLFN-LTRDHVLYEDEYLMAVNKPKGVYCE 96
Query: 192 XXXXXXXXXXXXXXXXXXXXXXXXXRLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTY 371
RLDRDTSGVMIITK HK+AAK VKA+TE +I K+Y
Sbjct: 97 AVLRSAPQIVLDSSSEFHLAN----RLDRDTSGVMIITKSHKVAAKLVKAFTEHKIRKSY 152
Query: 372 LALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSING 551
+ALCI SP W I + SGHGRSK+GAWR Y+ DVG+VLPGGS VRDM T V+S+NG
Sbjct: 153 IALCIGSSPNWRKITVSSGHGRSKHGAWRVYAALDVGRVLPGGSFVRDMETTFEVVSVNG 212
Query: 552 FPKTTTDAIHDSDTFLQSINLTAATLKNPDKTILDGMNQVVATEQLETGLGLQPSDMSMP 731
+ + + V+ E + ++S
Sbjct: 213 VETESCE-----------------------------VENVIVVE--------REQELSCA 235
Query: 732 SDEKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDDTFESHALHAETV 911
D D+V++RA+P +GRTHQIRLHCQY + IRGD KY G+ W+ TFE H LHAE +
Sbjct: 236 GD---DVVVVRAFPRSGRTHQIRLHCQYLGISIRGDVKYHGMYEWRGRTFEGHELHAECL 292
Query: 912 CFEHPVTGNLVKLHAPLPEWALKSFNC 992
+HPVT + + + APLP WA + +C
Sbjct: 293 SLDHPVTDDPIVIRAPLPCWATRDESC 319
>gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis]
Length = 319
Score = 262 bits (670), Expect = 2e-67
Identities = 143/326 (43%), Positives = 186/326 (57%), Gaps = 7/326 (2%)
Frame = +3
Query: 18 YPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXXXX 197
YP PLSPP P S+ VEL RA A + SS ++SR+ F++ED+C VAVNKP G+Y
Sbjct: 22 YPVPLSPPPPPVSKDVELSRAMSASSKSSL-FSISRNDFVFEDECLVAVNKPQGIYCESV 80
Query: 198 XXXXXXXXXXXXXXXXXXXXXXX-------RLDRDTSGVMIITKQHKIAAKFVKAYTERR 356
RLDRDTSG+M+ITK HK+A+K VKA+T +
Sbjct: 81 FDSVRKVLSDSSEPGQLETEASPPELHLANRLDRDTSGLMLITKSHKVASKLVKAFTTHK 140
Query: 357 ICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNV 536
+ KTY+A C+ +P W +I I+SGHGRSK+GAWR Y+ +DVG+ LPGGS VRDM T V
Sbjct: 141 VSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASDVGRTLPGGSVVRDMETSFEV 200
Query: 537 LSINGFPKTTTDAIHDSDTFLQSINLTAATLKNPDKTILDGMNQVVATEQLETGLGLQPS 716
LS+NG Q ++ K P + DG N ++ E+
Sbjct: 201 LSVNG----------------QRVS------KEPSEFRKDGNNVLIVEEK---------- 228
Query: 717 DMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDDTFESHAL 896
+ D K D +L+RA P +GR+HQIRLHCQY + +RGD KY GV WK T+ H L
Sbjct: 229 -ALIDRDGKKDEILVRARPKSGRSHQIRLHCQYLGISLRGDVKYEGVSQWKGKTYNGHEL 287
Query: 897 HAETVCFEHPVTGNLVKLHAPLPEWA 974
HAE++ FEHP+T LV L PLP WA
Sbjct: 288 HAESLSFEHPITSLLVVLSTPLPMWA 313
>gb|EMJ06787.1| hypothetical protein PRUPE_ppa008866mg [Prunus persica]
Length = 316
Score = 262 bits (670), Expect = 2e-67
Identities = 144/323 (44%), Positives = 181/323 (56%), Gaps = 4/323 (1%)
Frame = +3
Query: 18 YPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXXXX 197
YP PLSPP P S+ +EL RA A + SS +LSRD ++ED + VNKP GVY
Sbjct: 22 YPVPLSPPLPPISKHIELARAMSASSKSSL-FSLSRDDVVFEDQWLIVVNKPQGVYCESV 80
Query: 198 XXXXXXXXXXXXXXXXXXXXXXX----RLDRDTSGVMIITKQHKIAAKFVKAYTERRICK 365
RLDRDTSG+M+ITK HK+A+K VKA+T+ +I K
Sbjct: 81 LESVPQLLCDSAESGTPANQLELHLANRLDRDTSGLMVITKSHKVASKLVKAFTDHKISK 140
Query: 366 TYLALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSI 545
TY+A CI +P W I ++SGHGRSK+GAWR Y+ +DVG+ LPGGS VRDM T VLSI
Sbjct: 141 TYIARCIGSAPKWERITLKSGHGRSKFGAWRVYAASDVGRTLPGGSMVRDMETSFEVLSI 200
Query: 546 NGFPKTTTDAIHDSDTFLQSINLTAATLKNPDKTILDGMNQVVATEQLETGLGLQPSDMS 725
NG +LK P + D N +V E+
Sbjct: 201 NG----------------------QGSLKEPSEFKKDEANTIVVQEK-----------AV 227
Query: 726 MPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDDTFESHALHAE 905
+ D K D +L+RA P +GRTHQIRLHCQY + IRGD KY GV WK T++ H LHAE
Sbjct: 228 IDKDTKKDEILVRARPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGRTYDGHELHAE 287
Query: 906 TVCFEHPVTGNLVKLHAPLPEWA 974
++ FEHP+TG V AP+P WA
Sbjct: 288 SLSFEHPITGLPVMFQAPVPSWA 310
>ref|NP_001067018.1| Os12g0560500 [Oryza sativa Japonica Group]
gi|122203511|sp|Q2QNM3.1|PUS1_ORYSJ RecName: Full=RNA
pseudouridine synthase 1; AltName: Full=RNA
pseudouridylate synthase 1; AltName: Full=RNA-uridine
isomerase 1 gi|77556134|gb|ABA98930.1| RNA
pseudouridylate synthase, putative, expressed [Oryza
sativa Japonica Group] gi|113649525|dbj|BAF30037.1|
Os12g0560500 [Oryza sativa Japonica Group]
gi|125537021|gb|EAY83509.1| hypothetical protein
OsI_38723 [Oryza sativa Indica Group]
gi|215692563|dbj|BAG87983.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 345
Score = 262 bits (670), Expect = 2e-67
Identities = 145/321 (45%), Positives = 179/321 (55%), Gaps = 1/321 (0%)
Frame = +3
Query: 15 EYPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXXX 194
EYP P+SPPYP S+ VEL RA A A S+A S ++ED+ V+KP GVY
Sbjct: 50 EYPVPVSPPYPAASKDVELRRAMTASARSAA---YSSAPVVFEDEWLAVVDKPAGVYCDA 106
Query: 195 XXXXXXXXXXXXXXXXXXXXXXXX-RLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTY 371
RLDRDTSG+M+ITK +K+A K VKA+TE ++ KTY
Sbjct: 107 LLSALPCSAATLGDEATKPNLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTEHKVKKTY 166
Query: 372 LALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSING 551
LALCI P W I I SGHGRSK+GAWR Y+ +DVG+ LPGGS VRDMST VL ING
Sbjct: 167 LALCIGYPPAWEKIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTRFEVLGING 226
Query: 552 FPKTTTDAIHDSDTFLQSINLTAATLKNPDKTILDGMNQVVATEQLETGLGLQPSDMSMP 731
+ P +D + E+ +D++
Sbjct: 227 ----------------------KGQFREPSNFEVDETESITVQEKA--------ADLTSD 256
Query: 732 SDEKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDDTFESHALHAETV 911
DEKN I+L+RAYP +GRTHQIRLHCQY PIRGD KY GV+ W ++ HALHAE++
Sbjct: 257 GDEKNSIILVRAYPQSGRTHQIRLHCQYLGFPIRGDVKYSGVIEWNGVDYDGHALHAESL 316
Query: 912 CFEHPVTGNLVKLHAPLPEWA 974
F HPVTG V +PLP WA
Sbjct: 317 SFVHPVTGLPVTFRSPLPSWA 337
>gb|EEE53427.1| hypothetical protein OsJ_36505 [Oryza sativa Japonica Group]
Length = 423
Score = 262 bits (670), Expect = 2e-67
Identities = 145/321 (45%), Positives = 179/321 (55%), Gaps = 1/321 (0%)
Frame = +3
Query: 15 EYPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXXX 194
EYP P+SPPYP S+ VEL RA A A S+A S ++ED+ V+KP GVY
Sbjct: 128 EYPVPVSPPYPAASKDVELRRAMTASARSAA---YSSAPVVFEDEWLAVVDKPAGVYCDA 184
Query: 195 XXXXXXXXXXXXXXXXXXXXXXXX-RLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTY 371
RLDRDTSG+M+ITK +K+A K VKA+TE ++ KTY
Sbjct: 185 LLSALPCSAATLGDEATKPNLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTEHKVKKTY 244
Query: 372 LALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSING 551
LALCI P W I I SGHGRSK+GAWR Y+ +DVG+ LPGGS VRDMST VL ING
Sbjct: 245 LALCIGYPPAWEKIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTRFEVLGING 304
Query: 552 FPKTTTDAIHDSDTFLQSINLTAATLKNPDKTILDGMNQVVATEQLETGLGLQPSDMSMP 731
+ P +D + E+ +D++
Sbjct: 305 ----------------------KGQFREPSNFEVDETESITVQEKA--------ADLTSD 334
Query: 732 SDEKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDDTFESHALHAETV 911
DEKN I+L+RAYP +GRTHQIRLHCQY PIRGD KY GV+ W ++ HALHAE++
Sbjct: 335 GDEKNSIILVRAYPQSGRTHQIRLHCQYLGFPIRGDVKYSGVIEWNGVDYDGHALHAESL 394
Query: 912 CFEHPVTGNLVKLHAPLPEWA 974
F HPVTG V +PLP WA
Sbjct: 395 SFVHPVTGLPVTFRSPLPSWA 415
>ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citrus clementina]
gi|567881937|ref|XP_006433527.1| hypothetical protein
CICLE_v10001637mg [Citrus clementina]
gi|557535648|gb|ESR46766.1| hypothetical protein
CICLE_v10001637mg [Citrus clementina]
gi|557535649|gb|ESR46767.1| hypothetical protein
CICLE_v10001637mg [Citrus clementina]
Length = 357
Score = 261 bits (668), Expect = 4e-67
Identities = 145/334 (43%), Positives = 185/334 (55%), Gaps = 12/334 (3%)
Frame = +3
Query: 18 YPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXXXX 197
YP PLSPP P S+ +EL RA A + SS + LSR LYED+ FVAVNKP GVY
Sbjct: 52 YPTPLSPPLPAISKDIELTRAMSASSKSSL-YKLSRSDVLYEDEWFVAVNKPQGVYCESV 110
Query: 198 XXXXXXXXXXXXXXXXXXXXXXX------------RLDRDTSGVMIITKQHKIAAKFVKA 341
RLDRDTSGVM+ITK HK+A+K VKA
Sbjct: 111 LASVPCFLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGVMVITKSHKVASKLVKA 170
Query: 342 YTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMS 521
+T+ ++ KTY+ALCI P+P W I I SGHGRSK+GAWR Y+ +DVG+VLPGGS VRDM
Sbjct: 171 FTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAASDVGRVLPGGSVVRDMV 230
Query: 522 TLLNVLSINGFPKTTTDAIHDSDTFLQSINLTAATLKNPDKTILDGMNQVVATEQLETGL 701
T VLS+NG + K P + N +V ++
Sbjct: 231 TSFEVLSVNG----------------------EGSFKEPSELQEHEENNIVVEKK----- 263
Query: 702 GLQPSDMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDDTF 881
+ +D K + +L+RA+P +GRTHQIRLHCQY + IRGD KY GV W +
Sbjct: 264 ------AVLDADAKKNEILVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRY 317
Query: 882 ESHALHAETVCFEHPVTGNLVKLHAPLPEWALKS 983
+ H LHAE++ F+HPVTG V + APLP W ++
Sbjct: 318 DGHELHAESLSFDHPVTGCPVMVQAPLPLWGTEA 351
>ref|XP_003579309.1| PREDICTED: RNA pseudourine synthase 1-like [Brachypodium
distachyon]
Length = 308
Score = 261 bits (667), Expect = 5e-67
Identities = 145/322 (45%), Positives = 181/322 (56%), Gaps = 2/322 (0%)
Frame = +3
Query: 15 EYPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXXX 194
EYP P+SPPYP S+ VEL RA A A S A + + ++ED+ V+KP GVY
Sbjct: 12 EYPCPVSPPYPAVSKDVELRRAMTASARSGAYASAA---VVFEDEWLSVVDKPAGVYCDA 68
Query: 195 XXXXXXXXXXXXXXXXXXXXXXXX--RLDRDTSGVMIITKQHKIAAKFVKAYTERRICKT 368
RLDRDTSG+M+ITK +K+AAK VKA+TE ++ KT
Sbjct: 69 LLSALPCYAAAAAGDPATKPNLHLANRLDRDTSGLMVITKCNKVAAKLVKAFTEHKVKKT 128
Query: 369 YLALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSIN 548
YLALCI PTW I I SGHGRSK+GAWR Y+ +DVG+ LPGGS+VRDMST VL IN
Sbjct: 129 YLALCIGYPPTWEKIRICSGHGRSKHGAWRVYAMSDVGRTLPGGSSVRDMSTKFEVLGIN 188
Query: 549 GFPKTTTDAIHDSDTFLQSINLTAATLKNPDKTILDGMNQVVATEQLETGLGLQPSDMSM 728
G + P +D + + E + +D S
Sbjct: 189 G----------------------KGQFREPSNVNIDDIESITVQE--------KAADHSS 218
Query: 729 PSDEKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDDTFESHALHAET 908
D KN ++L+RAYP +GRTHQIRLHCQY PIRGD KYGGV+ W + HALH+E+
Sbjct: 219 TDDLKNHMILVRAYPQSGRTHQIRLHCQYLGFPIRGDVKYGGVIEWNGVDCDGHALHSES 278
Query: 909 VCFEHPVTGNLVKLHAPLPEWA 974
+ F HPVTG + APLP WA
Sbjct: 279 LSFVHPVTGLPITFRAPLPSWA 300
>ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like [Citrus sinensis]
Length = 324
Score = 260 bits (665), Expect = 9e-67
Identities = 144/334 (43%), Positives = 184/334 (55%), Gaps = 12/334 (3%)
Frame = +3
Query: 18 YPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXXXX 197
YP PLSPP P S+ +EL RA A + SS + LSR LYED+ VAVNKP GVY
Sbjct: 19 YPTPLSPPLPAISKDIELTRAMSASSKSSL-YKLSRSDVLYEDEWLVAVNKPQGVYCESV 77
Query: 198 XXXXXXXXXXXXXXXXXXXXXXX------------RLDRDTSGVMIITKQHKIAAKFVKA 341
RLDRDTSGVM+ITK HK+A+K VKA
Sbjct: 78 LASVPCLLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGVMVITKSHKVASKLVKA 137
Query: 342 YTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMS 521
+T+ ++ KTY+ALCI P+P W I I SGHGRSK+GAWR Y+ +DVG+VLPGGS VRDM
Sbjct: 138 FTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAASDVGRVLPGGSVVRDMV 197
Query: 522 TLLNVLSINGFPKTTTDAIHDSDTFLQSINLTAATLKNPDKTILDGMNQVVATEQLETGL 701
T VLS+NG + K P + D N +V ++
Sbjct: 198 TSFEVLSVNG----------------------EGSFKEPSELQEDEENNIVVEKK----- 230
Query: 702 GLQPSDMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDDTF 881
+ +D K + +L+R +P +GRTHQIRLHCQY + IRGD KY GV W +
Sbjct: 231 ------AVLDADAKKNEILVRVFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRY 284
Query: 882 ESHALHAETVCFEHPVTGNLVKLHAPLPEWALKS 983
+ H LHAE++ EHP+TG V + APLP WA ++
Sbjct: 285 DGHELHAESLSLEHPITGCPVMVQAPLPLWATQA 318
>gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis]
Length = 319
Score = 259 bits (663), Expect = 2e-66
Identities = 142/326 (43%), Positives = 185/326 (56%), Gaps = 7/326 (2%)
Frame = +3
Query: 18 YPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXXXX 197
YP PLSPP P S+ VEL RA A + SS ++SR+ F++ED+C VAVNKP G+Y
Sbjct: 22 YPVPLSPPPPPVSKDVELSRAMSASSKSSL-FSISRNDFVFEDECLVAVNKPQGIYCESV 80
Query: 198 XXXXXXXXXXXXXXXXXXXXXXX-------RLDRDTSGVMIITKQHKIAAKFVKAYTERR 356
RLDRDTSG+M+ITK HK+A+K VKA+T +
Sbjct: 81 FDSVRKVLSDSSEPGQLETEASPPELHLANRLDRDTSGLMLITKSHKVASKLVKAFTTHK 140
Query: 357 ICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNV 536
+ KTY+A C+ +P W +I I+SGHGRSK+GAWR Y+ +DVG+ LPGGS VRDM T V
Sbjct: 141 VSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASDVGRTLPGGSVVRDMETSFEV 200
Query: 537 LSINGFPKTTTDAIHDSDTFLQSINLTAATLKNPDKTILDGMNQVVATEQLETGLGLQPS 716
LS+NG Q ++ K P + DG N ++ E+
Sbjct: 201 LSVNG----------------QRVS------KEPSEFRKDGNNVLIVEEK---------- 228
Query: 717 DMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDDTFESHAL 896
+ D K D +L+RA P +GR+HQIRLHCQY + +RGD KY GV WK T+ H L
Sbjct: 229 -ALIDRDGKKDEILVRARPKSGRSHQIRLHCQYLGISLRGDVKYEGVSQWKGKTYNGHEL 287
Query: 897 HAETVCFEHPVTGNLVKLHAPLPEWA 974
HAE++ FEHP+T V L PLP WA
Sbjct: 288 HAESLSFEHPITSLPVVLSTPLPMWA 313
>tpg|DAA55259.1| TPA: hypothetical protein ZEAMMB73_192305 [Zea mays]
Length = 340
Score = 259 bits (661), Expect = 3e-66
Identities = 139/320 (43%), Positives = 178/320 (55%)
Frame = +3
Query: 15 EYPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXXX 194
EYP P+SPPYP S+ +EL RA A A S+A + ++ED+ V+KP GVY
Sbjct: 46 EYPSPVSPPYPATSKDLELRRAMTASARSAA---FASADVVFEDEWLAVVDKPAGVYCDA 102
Query: 195 XXXXXXXXXXXXXXXXXXXXXXXXRLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTYL 374
RLDRDTSG+M+ITK +K+A K VKA+T+ ++ KTYL
Sbjct: 103 LLTSFPCSAVSENPATKPNLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTDHKVKKTYL 162
Query: 375 ALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSINGF 554
ALCI P W I I SGHGRSK+GAWR Y+ +DVG+ LPGGS VRDMST VL +NG
Sbjct: 163 ALCIGFPPAWEKIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTRFEVLGVNG- 221
Query: 555 PKTTTDAIHDSDTFLQSINLTAATLKNPDKTILDGMNQVVATEQLETGLGLQPSDMSMPS 734
+ P D + + E + +D +
Sbjct: 222 ---------------------KGQFREPYSLDTDDIEPITVQE--------KATDQTCGG 252
Query: 735 DEKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDDTFESHALHAETVC 914
D + ++L+RAYP +GRTHQIRLHCQY LPIRGD KYGGV+ W E HALHAE++
Sbjct: 253 DANSSVILVRAYPQSGRTHQIRLHCQYLGLPIRGDVKYGGVIEWDGVECEGHALHAESLS 312
Query: 915 FEHPVTGNLVKLHAPLPEWA 974
F HP+TG + L +PLP WA
Sbjct: 313 FVHPITGLPITLRSPLPPWA 332
>gb|ACN26382.1| unknown [Zea mays]
Length = 307
Score = 259 bits (661), Expect = 3e-66
Identities = 139/320 (43%), Positives = 178/320 (55%)
Frame = +3
Query: 15 EYPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXXX 194
EYP P+SPPYP S+ +EL RA A A S+A + ++ED+ V+KP GVY
Sbjct: 13 EYPSPVSPPYPATSKDLELRRAMTASARSAA---FASADVVFEDEWLAVVDKPAGVYCDA 69
Query: 195 XXXXXXXXXXXXXXXXXXXXXXXXRLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTYL 374
RLDRDTSG+M+ITK +K+A K VKA+T+ ++ KTYL
Sbjct: 70 LLTSFPCSAVSENPATKPNLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTDHKVKKTYL 129
Query: 375 ALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSINGF 554
ALCI P W I I SGHGRSK+GAWR Y+ +DVG+ LPGGS VRDMST VL +NG
Sbjct: 130 ALCIGFPPAWEKIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTRFEVLGVNG- 188
Query: 555 PKTTTDAIHDSDTFLQSINLTAATLKNPDKTILDGMNQVVATEQLETGLGLQPSDMSMPS 734
+ P D + + E + +D +
Sbjct: 189 ---------------------KGQFREPYSLDTDDIEPITVQE--------KATDQTCGG 219
Query: 735 DEKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDDTFESHALHAETVC 914
D + ++L+RAYP +GRTHQIRLHCQY LPIRGD KYGGV+ W E HALHAE++
Sbjct: 220 DANSSVILVRAYPQSGRTHQIRLHCQYLGLPIRGDVKYGGVIEWDGVECEGHALHAESLS 279
Query: 915 FEHPVTGNLVKLHAPLPEWA 974
F HP+TG + L +PLP WA
Sbjct: 280 FVHPITGLPITLRSPLPPWA 299
>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 321
Score = 258 bits (659), Expect = 5e-66
Identities = 147/331 (44%), Positives = 184/331 (55%), Gaps = 9/331 (2%)
Frame = +3
Query: 18 YPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXXXX 197
YP PLSPP P S+Q+EL RA A + SS LSR LYED +AVNKP GVY
Sbjct: 22 YPTPLSPPLPSISKQIELARALSASSRSSL-FTLSRSDVLYEDQWLIAVNKPQGVYCETV 80
Query: 198 XXXXXXXXXXXXXXXXXXXXXXX---------RLDRDTSGVMIITKQHKIAAKFVKAYTE 350
RLDRDTSGVM+ITK HK+A+K VKA+T+
Sbjct: 81 LESVPRVLAASAELTDPSEGAEGNPHEFHLANRLDRDTSGVMVITKSHKVASKLVKAFTD 140
Query: 351 RRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLL 530
+I KTY+ALCI +P W I I+SGHGRSK+G WR Y+ +DVG+ LPGGSTV+DM T
Sbjct: 141 HKIKKTYIALCIGLAPKWEKITIKSGHGRSKFGVWRVYAASDVGQTLPGGSTVKDMETSF 200
Query: 531 NVLSINGFPKTTTDAIHDSDTFLQSINLTAATLKNPDKTILDGMNQVVATEQLETGLGLQ 710
+LS+NG + + D + + AA KN
Sbjct: 201 ELLSVNGQGSFKELSEFEKDENILVVEEKAA--KN------------------------- 233
Query: 711 PSDMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDDTFESH 890
+D K +L+RA+P +GRTHQIRLHCQY + IRGD KY GV W+ T++ H
Sbjct: 234 -------ADVKKVEILVRAFPQSGRTHQIRLHCQYLGISIRGDVKYEGVYEWEGRTYDGH 286
Query: 891 ALHAETVCFEHPVTGNLVKLHAPLPEWALKS 983
LHAET+ FEHPVTG V L APLP WA+++
Sbjct: 287 ELHAETLSFEHPVTGVPVMLRAPLPSWAIQA 317
>ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutrema salsugineum]
gi|557088941|gb|ESQ29721.1| hypothetical protein
EUTSA_v10023586mg [Eutrema salsugineum]
Length = 333
Score = 258 bits (658), Expect = 6e-66
Identities = 145/325 (44%), Positives = 186/325 (57%)
Frame = +3
Query: 18 YPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXXXX 197
YPKP+S P P S+ +EL RA A + SS + L+R+ LYED+ +AVNKP G+Y
Sbjct: 49 YPKPISAPPPPISKDIELKRAMEASSKSSLFN-LTRNDVLYEDEWLMAVNKPKGIYCESV 107
Query: 198 XXXXXXXXXXXXXXXXXXXXXXXRLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTYLA 377
RLDRDTSGVM+ITK HK+AAK VKA+TE +I K+Y+A
Sbjct: 108 LSSAPKVIVDSSSTANEFHLAN-RLDRDTSGVMLITKSHKVAAKLVKAFTEHKIRKSYIA 166
Query: 378 LCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSINGFP 557
LCI SP W+ I + SGHGRSK+GAWR Y+ DVG+VLPGGS VRDM T V+S+NG
Sbjct: 167 LCIGSSPNWSKITVRSGHGRSKHGAWRVYAALDVGRVLPGGSFVRDMETTFEVVSVNG-- 224
Query: 558 KTTTDAIHDSDTFLQSINLTAATLKNPDKTILDGMNQVVATEQLETGLGLQPSDMSMPSD 737
+KT + V+ E E GL S
Sbjct: 225 ---------------------------EKTEPLEVESVIVVEG-EPGL----------SC 246
Query: 738 EKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDDTFESHALHAETVCF 917
+D+V++RA+P +GRTHQIRLHC+Y +PIRGD KY G+ W+ TFE H LHAE++ F
Sbjct: 247 VGDDVVVVRAFPRSGRTHQIRLHCRYLGIPIRGDVKYHGMYEWRGRTFEGHELHAESLSF 306
Query: 918 EHPVTGNLVKLHAPLPEWALKSFNC 992
+HPVTG + + APLP W C
Sbjct: 307 DHPVTGEPIVIRAPLPCWVAGDGEC 331
>ref|XP_004962774.1| PREDICTED: RNA pseudouridine synthase 1-like [Setaria italica]
Length = 308
Score = 256 bits (653), Expect = 2e-65
Identities = 142/328 (43%), Positives = 177/328 (53%)
Frame = +3
Query: 15 EYPKPLSPPYPEHSRQVELDRAKRAEAASSAGHALSRDHFLYEDDCFVAVNKPCGVYXXX 194
EYP P+SPPYP S+ VEL RA A A S+ + ++ED+ V+KP GVY
Sbjct: 14 EYPSPVSPPYPAVSKDVELRRAMTASARSAV---FASADVVFEDEWLAVVDKPAGVYCDA 70
Query: 195 XXXXXXXXXXXXXXXXXXXXXXXXRLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTYL 374
RLDRDTSG+MIITK +K+A K VKA+T+ ++ K YL
Sbjct: 71 LLTALPRSAASGDSATKPNLHLANRLDRDTSGLMIITKCNKVAGKLVKAFTDHKVKKAYL 130
Query: 375 ALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSINGF 554
ALCI PTW I I SGHGRSK+GAWR Y+ D+G+ LPGGS VRDMST VL +NG
Sbjct: 131 ALCIGFPPTWEKIKICSGHGRSKHGAWRVYAMPDIGRSLPGGSVVRDMSTQFEVLGVNG- 189
Query: 555 PKTTTDAIHDSDTFLQSINLTAATLKNPDKTILDGMNQVVATEQLETGLGLQPSDMSMPS 734
+ P D + + E+ +
Sbjct: 190 ---------------------KGQFREPYNFFTDDIESITVQEKAPA--------QTCND 220
Query: 735 DEKNDIVLLRAYPLTGRTHQIRLHCQYARLPIRGDAKYGGVLTWKDDTFESHALHAETVC 914
D KN ++L+RAYP +GRTHQIRLHCQY PIRGD KYGGV+ W + HALHAE++
Sbjct: 221 DVKNSVILVRAYPQSGRTHQIRLHCQYLGFPIRGDVKYGGVIEWNGLECDGHALHAESLS 280
Query: 915 FEHPVTGNLVKLHAPLPEWALKSFNCTV 998
F HPVTG V +PLP WA K F T+
Sbjct: 281 FVHPVTGLPVTFQSPLPSWA-KDFISTM 307