BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00022730
         (1296 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25332.1| unknown [Picea sitchensis]                             108   4e-21
gb|EOY27958.1| Rho termination factor, putative isoform 2 [Theob...    67   1e-08
gb|EOY27957.1| Rho termination factor, putative isoform 1 [Theob...    67   1e-08
ref|XP_006833047.1| hypothetical protein AMTR_s00170p00016030 [A...    60   2e-06
gb|EXB84045.1| hypothetical protein L484_005809 [Morus notabilis]      59   6e-06

>gb|ABK25332.1| unknown [Picea sitchensis]
          Length = 432

 Score =  108 bits (271), Expect = 4e-21
 Identities = 102/345 (29%), Positives = 153/345 (44%), Gaps = 34/345 (9%)
 Frame = -1

Query: 1089 LSVPHIVHFAIGNASLSLQKISNSRRKFPVSALPVKESESHSQRQSRADNRNKRVRKKKS 910
            LS  H  H A+ N S   +  SN +R+ P+    VK+     + + + +   ++V+    
Sbjct: 75   LSSSHAEHMALSNISFPRRMPSNFKRQSPIPISAVKKEGRRIRNRKQENTGAEKVQDNFD 134

Query: 909  LEHV--QNAGKVYXXXXXXXXXXXXXXXXXXXXXXXXXNGNHSDTENPPNSSSIEDFKAL 736
             E+V  +     +                         +G++ D     NSS  +D  AL
Sbjct: 135  SENVTGETDNVNHSKIGYRLSQRSPSTYARRSPMSSPDDGSNPDMNKSSNSSVEDDIVAL 194

Query: 735  FWRIQEDPNV-QENLGRKLKDNSTSSINSNVKTEDASCLPKHKEP--------------- 604
            F RIQ +  V +EN G   K+++ SS   ++K+ D+      + P               
Sbjct: 195  FRRIQAESTVSKENPGNNKKNSNISS--KSMKSADSVLRVLRQYPDKPKEEIEEETNQKI 252

Query: 603  -VMNILHKFDDRIKHGNKDQNTGKN-------------GKASRKGSFSREWVNKNSKRPD 466
             +M    K   +I    K     K               K + K   SR    K+  +  
Sbjct: 253  SLMGGYEKMATQIDSSRKQSKKSKEIEEEPNISLMAGYEKMATKRDSSRRQSKKSESQRI 312

Query: 465  ICSTDFSQQ-TISRPPSEFVRKSPIPLSAIKKSVRPVPGLKETEDMKQNMLTS-SSDVKL 292
              + D S+   +SRP S+FV KSPIPLSAIKK VRPVPG++++++  QN  TS  S+   
Sbjct: 313  TKNMDKSEDFLLSRPTSKFVHKSPIPLSAIKKEVRPVPGIQQSDE--QNGGTSRDSEGTS 370

Query: 291  PSSDNGSFLKHSPSSSEFQFDDLGKYKLSELRDYAKSHGLKGYSR 157
             S  NGS L+ S    E Q DDL +  LSEL+  AKS+GLKGYS+
Sbjct: 371  ASVLNGSLLRDSAGLLEDQPDDLSQLNLSELKKTAKSYGLKGYSK 415


>gb|EOY27958.1| Rho termination factor, putative isoform 2 [Theobroma cacao]
          Length = 257

 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 59/205 (28%), Positives = 93/205 (45%)
 Frame = -1

Query: 771 PNSSSIEDFKALFWRIQEDPNVQENLGRKLKDNSTSSINSNVKTEDASCLPKHKEPVMNI 592
           PNSS+ ED  ALF RIQ   +  E    K K  S+S   S              E V+++
Sbjct: 88  PNSSNQEDIIALFRRIQSSISKGETGSAKAKSLSSSKDKSTA------------ESVLDV 135

Query: 591 LHKFDDRIKHGNKDQNTGKNGKASRKGSFSREWVNKNSKRPDICSTDFSQQTISRPPSEF 412
           L +    ++       + K GKASR  S   + +    K+ +  + DF    + RPPS F
Sbjct: 136 LRESRKNVR----GIRSNKGGKASRWKSGVPKKIEGMGKKANAATQDFK---LLRPPSNF 188

Query: 411 VRKSPIPLSAIKKSVRPVPGLKETEDMKQNMLTSSSDVKLPSSDNGSFLKHSPSSSEFQF 232
           V++SP+P     +    V GL++  ++    + ++  +KL + +                
Sbjct: 189 VKRSPVPYPTAPR----VKGLEQNNEV----VATNEGLKLANIE---------------- 224

Query: 231 DDLGKYKLSELRDYAKSHGLKGYSR 157
               K KL+EL+D AK+ G+KGYSR
Sbjct: 225 ----KLKLTELKDLAKARGIKGYSR 245


>gb|EOY27957.1| Rho termination factor, putative isoform 1 [Theobroma cacao]
          Length = 345

 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 59/205 (28%), Positives = 93/205 (45%)
 Frame = -1

Query: 771 PNSSSIEDFKALFWRIQEDPNVQENLGRKLKDNSTSSINSNVKTEDASCLPKHKEPVMNI 592
           PNSS+ ED  ALF RIQ   +  E    K K  S+S   S              E V+++
Sbjct: 176 PNSSNQEDIIALFRRIQSSISKGETGSAKAKSLSSSKDKSTA------------ESVLDV 223

Query: 591 LHKFDDRIKHGNKDQNTGKNGKASRKGSFSREWVNKNSKRPDICSTDFSQQTISRPPSEF 412
           L +    ++       + K GKASR  S   + +    K+ +  + DF    + RPPS F
Sbjct: 224 LRESRKNVR----GIRSNKGGKASRWKSGVPKKIEGMGKKANAATQDFK---LLRPPSNF 276

Query: 411 VRKSPIPLSAIKKSVRPVPGLKETEDMKQNMLTSSSDVKLPSSDNGSFLKHSPSSSEFQF 232
           V++SP+P     +    V GL++  ++    + ++  +KL + +                
Sbjct: 277 VKRSPVPYPTAPR----VKGLEQNNEV----VATNEGLKLANIE---------------- 312

Query: 231 DDLGKYKLSELRDYAKSHGLKGYSR 157
               K KL+EL+D AK+ G+KGYSR
Sbjct: 313 ----KLKLTELKDLAKARGIKGYSR 333


>ref|XP_006833047.1| hypothetical protein AMTR_s00170p00016030 [Amborella trichopoda]
           gi|548837640|gb|ERM98325.1| hypothetical protein
           AMTR_s00170p00016030 [Amborella trichopoda]
          Length = 234

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 59/204 (28%), Positives = 90/204 (44%)
 Frame = -1

Query: 768 NSSSIEDFKALFWRIQEDPNVQENLGRKLKDNSTSSINSNVKTEDASCLPKHKEPVMNIL 589
           +SSS E+  ALF RIQ            +   S  S N ++   D S + +  + V++ L
Sbjct: 59  DSSSQEEIIALFRRIQSS----------ISKGSPRSTNKSIT--DDSKIKQSADSVLHAL 106

Query: 588 HKFDDRIKHGNKDQNTGKNGKASRKGSFSREWVNKNSKRPDICSTDFSQQTISRPPSEFV 409
            ++  R    NK+  +G+      +G+  R  +NK+ K  +  +  F    +SRP S FV
Sbjct: 107 RQYPARKL--NKEATSGQGKDVRGRGALRRGSLNKDQKDEEPKTDHFK---LSRPASNFV 161

Query: 408 RKSPIPLSAIKKSVRPVPGLKETEDMKQNMLTSSSDVKLPSSDNGSFLKHSPSSSEFQFD 229
           ++SPIP S  ++ V     L        N LTS +                        D
Sbjct: 162 KRSPIPSSLPREKVDE-KALASGAKTVDNALTSKT-----------------------MD 197

Query: 228 DLGKYKLSELRDYAKSHGLKGYSR 157
           D+   KL ELR  A+SHG+KGYS+
Sbjct: 198 DM---KLMELRKLARSHGMKGYSK 218


>gb|EXB84045.1| hypothetical protein L484_005809 [Morus notabilis]
          Length = 258

 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 5/210 (2%)
 Frame = -1

Query: 771 PNSSSIEDFKALFWRIQEDPNVQENLGRKLKDNSTSSINSNVKTEDASCLPKHKEPVMNI 592
           PNS++ E+  ALF RIQ   + ++++  K        IN++   E +S      E ++ +
Sbjct: 88  PNSANQEEIIALFRRIQSSISKEKSVNDK-------KINADASEEKSSV-----ESILKV 135

Query: 591 LHKFDDRIKHGNKDQNTGKNGKAS----RKGSFSREWVNKNSKRPDICSTDFSQQTISR- 427
           L +             +GK GKA     +K S  +  V K  +  +  +   +   +SR 
Sbjct: 136 LRR-------------SGKQGKAKIEEGKKISMRKRVVPKKDQELEGSTPAVTGSKLSRR 182

Query: 426 PPSEFVRKSPIPLSAIKKSVRPVPGLKETEDMKQNMLTSSSDVKLPSSDNGSFLKHSPSS 247
           PPS FV++SPIP   I +S+        + ++     T++ +  L          H P  
Sbjct: 183 PPSNFVKRSPIPSPTIPRSI--------SLELNSKQSTAAEEEGL----------HLPKV 224

Query: 246 SEFQFDDLGKYKLSELRDYAKSHGLKGYSR 157
            E         KL+EL++ AKS G+KGYSR
Sbjct: 225 EEM--------KLAELKELAKSRGIKGYSR 246