BLASTX nr result
ID: Ephedra26_contig00022730
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra26_contig00022730 (1296 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK25332.1| unknown [Picea sitchensis] 108 4e-21 gb|EOY27958.1| Rho termination factor, putative isoform 2 [Theob... 67 1e-08 gb|EOY27957.1| Rho termination factor, putative isoform 1 [Theob... 67 1e-08 ref|XP_006833047.1| hypothetical protein AMTR_s00170p00016030 [A... 60 2e-06 gb|EXB84045.1| hypothetical protein L484_005809 [Morus notabilis] 59 6e-06 >gb|ABK25332.1| unknown [Picea sitchensis] Length = 432 Score = 108 bits (271), Expect = 4e-21 Identities = 102/345 (29%), Positives = 153/345 (44%), Gaps = 34/345 (9%) Frame = -1 Query: 1089 LSVPHIVHFAIGNASLSLQKISNSRRKFPVSALPVKESESHSQRQSRADNRNKRVRKKKS 910 LS H H A+ N S + SN +R+ P+ VK+ + + + + ++V+ Sbjct: 75 LSSSHAEHMALSNISFPRRMPSNFKRQSPIPISAVKKEGRRIRNRKQENTGAEKVQDNFD 134 Query: 909 LEHV--QNAGKVYXXXXXXXXXXXXXXXXXXXXXXXXXNGNHSDTENPPNSSSIEDFKAL 736 E+V + + +G++ D NSS +D AL Sbjct: 135 SENVTGETDNVNHSKIGYRLSQRSPSTYARRSPMSSPDDGSNPDMNKSSNSSVEDDIVAL 194 Query: 735 FWRIQEDPNV-QENLGRKLKDNSTSSINSNVKTEDASCLPKHKEP--------------- 604 F RIQ + V +EN G K+++ SS ++K+ D+ + P Sbjct: 195 FRRIQAESTVSKENPGNNKKNSNISS--KSMKSADSVLRVLRQYPDKPKEEIEEETNQKI 252 Query: 603 -VMNILHKFDDRIKHGNKDQNTGKN-------------GKASRKGSFSREWVNKNSKRPD 466 +M K +I K K K + K SR K+ + Sbjct: 253 SLMGGYEKMATQIDSSRKQSKKSKEIEEEPNISLMAGYEKMATKRDSSRRQSKKSESQRI 312 Query: 465 ICSTDFSQQ-TISRPPSEFVRKSPIPLSAIKKSVRPVPGLKETEDMKQNMLTS-SSDVKL 292 + D S+ +SRP S+FV KSPIPLSAIKK VRPVPG++++++ QN TS S+ Sbjct: 313 TKNMDKSEDFLLSRPTSKFVHKSPIPLSAIKKEVRPVPGIQQSDE--QNGGTSRDSEGTS 370 Query: 291 PSSDNGSFLKHSPSSSEFQFDDLGKYKLSELRDYAKSHGLKGYSR 157 S NGS L+ S E Q DDL + LSEL+ AKS+GLKGYS+ Sbjct: 371 ASVLNGSLLRDSAGLLEDQPDDLSQLNLSELKKTAKSYGLKGYSK 415 >gb|EOY27958.1| Rho termination factor, putative isoform 2 [Theobroma cacao] Length = 257 Score = 67.4 bits (163), Expect = 1e-08 Identities = 59/205 (28%), Positives = 93/205 (45%) Frame = -1 Query: 771 PNSSSIEDFKALFWRIQEDPNVQENLGRKLKDNSTSSINSNVKTEDASCLPKHKEPVMNI 592 PNSS+ ED ALF RIQ + E K K S+S S E V+++ Sbjct: 88 PNSSNQEDIIALFRRIQSSISKGETGSAKAKSLSSSKDKSTA------------ESVLDV 135 Query: 591 LHKFDDRIKHGNKDQNTGKNGKASRKGSFSREWVNKNSKRPDICSTDFSQQTISRPPSEF 412 L + ++ + K GKASR S + + K+ + + DF + RPPS F Sbjct: 136 LRESRKNVR----GIRSNKGGKASRWKSGVPKKIEGMGKKANAATQDFK---LLRPPSNF 188 Query: 411 VRKSPIPLSAIKKSVRPVPGLKETEDMKQNMLTSSSDVKLPSSDNGSFLKHSPSSSEFQF 232 V++SP+P + V GL++ ++ + ++ +KL + + Sbjct: 189 VKRSPVPYPTAPR----VKGLEQNNEV----VATNEGLKLANIE---------------- 224 Query: 231 DDLGKYKLSELRDYAKSHGLKGYSR 157 K KL+EL+D AK+ G+KGYSR Sbjct: 225 ----KLKLTELKDLAKARGIKGYSR 245 >gb|EOY27957.1| Rho termination factor, putative isoform 1 [Theobroma cacao] Length = 345 Score = 67.4 bits (163), Expect = 1e-08 Identities = 59/205 (28%), Positives = 93/205 (45%) Frame = -1 Query: 771 PNSSSIEDFKALFWRIQEDPNVQENLGRKLKDNSTSSINSNVKTEDASCLPKHKEPVMNI 592 PNSS+ ED ALF RIQ + E K K S+S S E V+++ Sbjct: 176 PNSSNQEDIIALFRRIQSSISKGETGSAKAKSLSSSKDKSTA------------ESVLDV 223 Query: 591 LHKFDDRIKHGNKDQNTGKNGKASRKGSFSREWVNKNSKRPDICSTDFSQQTISRPPSEF 412 L + ++ + K GKASR S + + K+ + + DF + RPPS F Sbjct: 224 LRESRKNVR----GIRSNKGGKASRWKSGVPKKIEGMGKKANAATQDFK---LLRPPSNF 276 Query: 411 VRKSPIPLSAIKKSVRPVPGLKETEDMKQNMLTSSSDVKLPSSDNGSFLKHSPSSSEFQF 232 V++SP+P + V GL++ ++ + ++ +KL + + Sbjct: 277 VKRSPVPYPTAPR----VKGLEQNNEV----VATNEGLKLANIE---------------- 312 Query: 231 DDLGKYKLSELRDYAKSHGLKGYSR 157 K KL+EL+D AK+ G+KGYSR Sbjct: 313 ----KLKLTELKDLAKARGIKGYSR 333 >ref|XP_006833047.1| hypothetical protein AMTR_s00170p00016030 [Amborella trichopoda] gi|548837640|gb|ERM98325.1| hypothetical protein AMTR_s00170p00016030 [Amborella trichopoda] Length = 234 Score = 60.5 bits (145), Expect = 2e-06 Identities = 59/204 (28%), Positives = 90/204 (44%) Frame = -1 Query: 768 NSSSIEDFKALFWRIQEDPNVQENLGRKLKDNSTSSINSNVKTEDASCLPKHKEPVMNIL 589 +SSS E+ ALF RIQ + S S N ++ D S + + + V++ L Sbjct: 59 DSSSQEEIIALFRRIQSS----------ISKGSPRSTNKSIT--DDSKIKQSADSVLHAL 106 Query: 588 HKFDDRIKHGNKDQNTGKNGKASRKGSFSREWVNKNSKRPDICSTDFSQQTISRPPSEFV 409 ++ R NK+ +G+ +G+ R +NK+ K + + F +SRP S FV Sbjct: 107 RQYPARKL--NKEATSGQGKDVRGRGALRRGSLNKDQKDEEPKTDHFK---LSRPASNFV 161 Query: 408 RKSPIPLSAIKKSVRPVPGLKETEDMKQNMLTSSSDVKLPSSDNGSFLKHSPSSSEFQFD 229 ++SPIP S ++ V L N LTS + D Sbjct: 162 KRSPIPSSLPREKVDE-KALASGAKTVDNALTSKT-----------------------MD 197 Query: 228 DLGKYKLSELRDYAKSHGLKGYSR 157 D+ KL ELR A+SHG+KGYS+ Sbjct: 198 DM---KLMELRKLARSHGMKGYSK 218 >gb|EXB84045.1| hypothetical protein L484_005809 [Morus notabilis] Length = 258 Score = 58.5 bits (140), Expect = 6e-06 Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 5/210 (2%) Frame = -1 Query: 771 PNSSSIEDFKALFWRIQEDPNVQENLGRKLKDNSTSSINSNVKTEDASCLPKHKEPVMNI 592 PNS++ E+ ALF RIQ + ++++ K IN++ E +S E ++ + Sbjct: 88 PNSANQEEIIALFRRIQSSISKEKSVNDK-------KINADASEEKSSV-----ESILKV 135 Query: 591 LHKFDDRIKHGNKDQNTGKNGKAS----RKGSFSREWVNKNSKRPDICSTDFSQQTISR- 427 L + +GK GKA +K S + V K + + + + +SR Sbjct: 136 LRR-------------SGKQGKAKIEEGKKISMRKRVVPKKDQELEGSTPAVTGSKLSRR 182 Query: 426 PPSEFVRKSPIPLSAIKKSVRPVPGLKETEDMKQNMLTSSSDVKLPSSDNGSFLKHSPSS 247 PPS FV++SPIP I +S+ + ++ T++ + L H P Sbjct: 183 PPSNFVKRSPIPSPTIPRSI--------SLELNSKQSTAAEEEGL----------HLPKV 224 Query: 246 SEFQFDDLGKYKLSELRDYAKSHGLKGYSR 157 E KL+EL++ AKS G+KGYSR Sbjct: 225 EEM--------KLAELKELAKSRGIKGYSR 246