BLASTX nr result
ID: Ephedra26_contig00022656
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00022656
(440 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX90741.1| DNA-directed RNA polymerase II subunit RPB1 isofo... 125 3e-47
gb|EOX90745.1| DNA-directed RNA polymerase II subunit RPB1 isofo... 125 3e-47
gb|EOX90744.1| DNA-directed RNA polymerase II subunit RPB1 isofo... 125 3e-47
ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II su... 124 7e-47
ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II su... 124 7e-47
ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citr... 124 7e-47
ref|XP_002530639.1| DNA-directed RNA polymerase II largest subun... 124 7e-47
ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II su... 124 7e-47
ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su... 124 7e-47
gb|EMJ04257.1| hypothetical protein PRUPE_ppa000093mg [Prunus pe... 124 7e-47
ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II su... 124 7e-47
ref|XP_006383037.1| DNA-directed RNA polymerase II largest subun... 124 7e-47
gb|ESW29856.1| hypothetical protein PHAVU_002G104500g [Phaseolus... 124 7e-47
ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II su... 124 7e-47
ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 124 7e-47
ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II su... 124 7e-47
ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II su... 124 7e-47
ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II su... 124 7e-47
gb|AAS79685.1| RNA polymerase II large subunit [Taxus canadensis] 125 9e-47
gb|AAS79684.1| RNA polymerase II large subunit [Thuja occidentalis] 125 9e-47
>gb|EOX90741.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
cacao] gi|508698846|gb|EOX90742.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
Length = 1861
Score = 125 bits (314), Expect(2) = 3e-47
Identities = 60/71 (84%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH IRIMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 466 MSIMGHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 525
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 526 SPQSNRPVMGI 536
Score = 89.0 bits (219), Expect(2) = 3e-47
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIRDDGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 412 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 455
>gb|EOX90745.1| DNA-directed RNA polymerase II subunit RPB1 isoform 5 [Theobroma
cacao]
Length = 1512
Score = 125 bits (314), Expect(2) = 3e-47
Identities = 60/71 (84%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH IRIMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 116 MSIMGHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 175
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 176 SPQSNRPVMGI 186
Score = 89.0 bits (219), Expect(2) = 3e-47
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIRDDGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 62 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 105
>gb|EOX90744.1| DNA-directed RNA polymerase II subunit RPB1 isoform 4 [Theobroma
cacao]
Length = 1511
Score = 125 bits (314), Expect(2) = 3e-47
Identities = 60/71 (84%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH IRIMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 116 MSIMGHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 175
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 176 SPQSNRPVMGI 186
Score = 89.0 bits (219), Expect(2) = 3e-47
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIRDDGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 62 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 105
>ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X5
[Citrus sinensis]
Length = 1963
Score = 124 bits (311), Expect(2) = 7e-47
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH I+IMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 466 MSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 525
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 526 SPQSNRPVMGI 536
Score = 89.0 bits (219), Expect(2) = 7e-47
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIRDDGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 412 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 455
>ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
[Citrus sinensis] gi|568825318|ref|XP_006467028.1|
PREDICTED: DNA-directed RNA polymerase II subunit 1-like
isoform X2 [Citrus sinensis]
Length = 1860
Score = 124 bits (311), Expect(2) = 7e-47
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH I+IMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 466 MSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 525
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 526 SPQSNRPVMGI 536
Score = 89.0 bits (219), Expect(2) = 7e-47
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIRDDGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 412 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 455
>ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citrus clementina]
gi|557527347|gb|ESR38597.1| hypothetical protein
CICLE_v10024686mg [Citrus clementina]
Length = 1860
Score = 124 bits (311), Expect(2) = 7e-47
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH I+IMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 466 MSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 525
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 526 SPQSNRPVMGI 536
Score = 89.0 bits (219), Expect(2) = 7e-47
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIRDDGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 412 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 455
>ref|XP_002530639.1| DNA-directed RNA polymerase II largest subunit, putative [Ricinus
communis] gi|223529812|gb|EEF31747.1| DNA-directed RNA
polymerase II largest subunit, putative [Ricinus
communis]
Length = 1855
Score = 124 bits (311), Expect(2) = 7e-47
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH I+IMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 466 MSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 525
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 526 SPQSNRPVMGI 536
Score = 89.0 bits (219), Expect(2) = 7e-47
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIRDDGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 412 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 455
>ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X4
[Citrus sinensis]
Length = 1853
Score = 124 bits (311), Expect(2) = 7e-47
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH I+IMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 466 MSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 525
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 526 SPQSNRPVMGI 536
Score = 89.0 bits (219), Expect(2) = 7e-47
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIRDDGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 412 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 455
>ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like
[Cucumis sativus]
Length = 1853
Score = 124 bits (311), Expect(2) = 7e-47
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH I+IMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 466 MSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 525
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 526 SPQSNRPVMGI 536
Score = 89.0 bits (219), Expect(2) = 7e-47
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIRDDGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 412 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 455
>gb|EMJ04257.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica]
Length = 1844
Score = 124 bits (311), Expect(2) = 7e-47
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH I+IMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 466 MSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 525
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 526 SPQSNRPVMGI 536
Score = 89.0 bits (219), Expect(2) = 7e-47
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIRDDGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 412 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 455
>ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like
[Fragaria vesca subsp. vesca]
Length = 1842
Score = 124 bits (311), Expect(2) = 7e-47
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH I+IMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 464 MSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 523
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 524 SPQSNRPVMGI 534
Score = 89.0 bits (219), Expect(2) = 7e-47
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIRDDGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 410 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 453
>ref|XP_006383037.1| DNA-directed RNA polymerase II largest subunit family protein
[Populus trichocarpa] gi|550338614|gb|ERP60834.1|
DNA-directed RNA polymerase II largest subunit family
protein [Populus trichocarpa]
Length = 1837
Score = 124 bits (311), Expect(2) = 7e-47
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH I+IMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 466 MSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 525
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 526 SPQSNRPVMGI 536
Score = 89.0 bits (219), Expect(2) = 7e-47
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIRDDGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 412 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 455
>gb|ESW29856.1| hypothetical protein PHAVU_002G104500g [Phaseolus vulgaris]
Length = 1834
Score = 124 bits (311), Expect(2) = 7e-47
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH I+IMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 466 MSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 525
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 526 SPQSNRPVMGI 536
Score = 89.0 bits (219), Expect(2) = 7e-47
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIRDDGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 412 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 455
>ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cicer
arietinum]
Length = 1834
Score = 124 bits (311), Expect(2) = 7e-47
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH I+IMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 466 MSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 525
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 526 SPQSNRPVMGI 536
Score = 89.0 bits (219), Expect(2) = 7e-47
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIRDDGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 412 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 455
>ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB1-like [Cucumis sativus]
Length = 1832
Score = 124 bits (311), Expect(2) = 7e-47
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH I+IMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 466 MSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 525
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 526 SPQSNRPVMGI 536
Score = 89.0 bits (219), Expect(2) = 7e-47
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIRDDGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 412 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 455
>ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Glycine
max]
Length = 1827
Score = 124 bits (311), Expect(2) = 7e-47
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH I+IMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 466 MSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 525
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 526 SPQSNRPVMGI 536
Score = 89.0 bits (219), Expect(2) = 7e-47
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIRDDGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 412 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 455
>ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
[Glycine max] gi|571435633|ref|XP_006573537.1|
PREDICTED: DNA-directed RNA polymerase II subunit 1-like
isoform X2 [Glycine max]
Length = 1827
Score = 124 bits (311), Expect(2) = 7e-47
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH I+IMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 466 MSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 525
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 526 SPQSNRPVMGI 536
Score = 89.0 bits (219), Expect(2) = 7e-47
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIRDDGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 412 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 455
>ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X3
[Citrus sinensis]
Length = 1790
Score = 124 bits (311), Expect(2) = 7e-47
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH I+IMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 466 MSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 525
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 526 SPQSNRPVMGI 536
Score = 89.0 bits (219), Expect(2) = 7e-47
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIRDDGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 412 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 455
>gb|AAS79685.1| RNA polymerase II large subunit [Taxus canadensis]
Length = 1013
Score = 125 bits (314), Expect(2) = 9e-47
Identities = 60/71 (84%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH IRIMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 388 MSIMGHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 447
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 448 SPQSNRPVMGI 458
Score = 87.4 bits (215), Expect(2) = 9e-47
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIR+DGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 334 KTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 377
>gb|AAS79684.1| RNA polymerase II large subunit [Thuja occidentalis]
Length = 1013
Score = 125 bits (314), Expect(2) = 9e-47
Identities = 60/71 (84%), Positives = 65/71 (91%)
Frame = +1
Query: 130 LSIMGHLIRIMPYLTFRLNLSVTSPFNADFDGDKMNMHVLQSFETKAEILELMMVPKCIV 309
+SIMGH IRIMPY TFRLNLSVTSP+NADFDGD+MNMHV QSFET+AE+LELMMVPKCIV
Sbjct: 388 MSIMGHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV 447
Query: 310 CP*SNRPAMGI 342
P SNRP MGI
Sbjct: 448 SPQSNRPVMGI 458
Score = 87.4 bits (215), Expect(2) = 9e-47
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +3
Query: 3 KTDAEYIIRDDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFV 134
KT A+YIIR+DGQRLDLRYLKKSSDHHLE GYKVERHLNDGDFV
Sbjct: 334 KTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFV 377