BLASTX nr result

ID: Ephedra26_contig00022645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00022645
         (400 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18087.1| unknown [Picea sitchensis]                              93   4e-17
ref|XP_001766001.1| predicted protein [Physcomitrella patens] gi...    76   4e-12
ref|XP_001784598.1| predicted protein [Physcomitrella patens] gi...    64   2e-08

>gb|ABR18087.1| unknown [Picea sitchensis]
          Length = 569

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 52/132 (39%), Positives = 78/132 (59%), Gaps = 2/132 (1%)
 Frame = +1

Query: 1   DATGFLHLDPHLKDLTLNGEFGFSYAGLAKIGESCPGIAKLCLDLDHLDIGAALQS--VS 174
           DA   L     LK+LTL G F F+ +GLA++GE+C G+  + L+ + LDI  AL+S  ++
Sbjct: 177 DALDALSNCKSLKELTLKGVFQFTPSGLARVGENCRGLVAVGLEFETLDISLALKSLAIN 236

Query: 175 SLGIRELRLRFLHGDLSKLAGVSSLVSLHVDTDQYVNVEESLVEIVTANKGLKEFMYFNS 354
              +  L L+F HGDL +L+   SLV LH++ D   + +  +  I  AN+ +KEF Y NS
Sbjct: 237 CQELETLTLKFSHGDLGELSRCRSLVRLHIEADNSNDADIPITNIAAANRKMKEFSYVNS 296

Query: 355 RSLLTDGALIKI 390
            + L D A + I
Sbjct: 297 LAPLGDSAAVTI 308


>ref|XP_001766001.1| predicted protein [Physcomitrella patens]
           gi|162682644|gb|EDQ69060.1| predicted protein
           [Physcomitrella patens]
          Length = 590

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 47/121 (38%), Positives = 79/121 (65%), Gaps = 2/121 (1%)
 Frame = +1

Query: 34  LKDLTLNGEFGFSYAGLAKIGESCPGIAKLCLDLDHLDIGAALQSVS--SLGIRELRLRF 207
           L++L+L GEF F+++GLA  G  C G+ KL L+L  ++I  AL+SV+     +R+L L++
Sbjct: 199 LQELSLKGEFRFTWSGLAIDGMKCVGLLKLVLELGAVNIDQALKSVAHGCHMLRDLSLKY 258

Query: 208 LHGDLSKLAGVSSLVSLHVDTDQYVNVEESLVEIVTANKGLKEFMYFNSRSLLTDGALIK 387
              +L +L+  +SL SL  ++D+   ++E++V I TANK L EF+   S + L+D A+I 
Sbjct: 259 TTANLWELSRCTSLRSLAFESDEEYQLDEAVVAIATANKNLTEFV---SPNRLSDSAVIA 315

Query: 388 I 390
           +
Sbjct: 316 L 316


>ref|XP_001784598.1| predicted protein [Physcomitrella patens]
           gi|162663830|gb|EDQ50573.1| predicted protein
           [Physcomitrella patens]
          Length = 679

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
 Frame = +1

Query: 34  LKDLTLNGEFGFSYAGLAKIGESCPGIAKLCLDLDHLDIGAALQSVS--SLGIRELRLRF 207
           L++L+L GEF F+ +GLA IG  C  + KL L+L  ++I   L+SV+     +R++ L+F
Sbjct: 287 LQELSLRGEFRFTSSGLAVIGAKCGELVKLVLELGAVNIDPVLKSVAHGCHRLRDVSLKF 346

Query: 208 LHGDLSKLAGVSSLVSLHVDTDQYVNVEESLVEIVTANKGLKEFMYFNSRS 360
               L +L+  +SL SL  ++D+   ++E++V I T+N  L E    N  S
Sbjct: 347 KTAKLRELSLCTSLRSLAFESDEEDRLDEAVVAIATSNSNLIELTSVNRLS 397


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