BLASTX nr result
ID: Ephedra26_contig00022638
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00022638
(615 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK25122.1| unknown [Picea sitchensis] 166 5e-39
ref|XP_002319140.2| pentatricopeptide repeat-containing family p... 130 3e-28
ref|XP_006387693.1| hypothetical protein POPTR_0671s00210g [Popu... 130 3e-28
ref|XP_002319139.1| predicted protein [Populus trichocarpa] 130 3e-28
ref|XP_006443350.1| hypothetical protein CICLE_v10019425mg [Citr... 129 6e-28
ref|XP_006286634.1| hypothetical protein CARUB_v10002473mg [Caps... 129 6e-28
ref|XP_006400022.1| hypothetical protein EUTSA_v10015264mg [Eutr... 127 3e-27
ref|XP_002871645.1| pentatricopeptide repeat-containing protein ... 125 7e-27
gb|EXB36250.1| hypothetical protein L484_013685 [Morus notabilis] 125 9e-27
ref|NP_197005.2| pentatricopeptide repeat-containing protein [Ar... 124 2e-26
emb|CAC01820.1| putative protein [Arabidopsis thaliana] 124 2e-26
ref|XP_004493133.1| PREDICTED: pentatricopeptide repeat-containi... 124 2e-26
ref|XP_006341692.1| PREDICTED: pentatricopeptide repeat-containi... 124 3e-26
ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containi... 124 3e-26
ref|XP_003624580.1| Pentatricopeptide repeat-containing protein ... 122 6e-26
ref|XP_002525469.1| pentatricopeptide repeat-containing protein,... 122 8e-26
gb|EMJ04381.1| hypothetical protein PRUPE_ppa025136mg, partial [... 120 2e-25
ref|XP_004235894.1| PREDICTED: pentatricopeptide repeat-containi... 120 2e-25
ref|XP_006829770.1| hypothetical protein AMTR_s00119p00029960 [A... 119 5e-25
gb|EOY26078.1| Tetratricopeptide repeat (TPR)-like superfamily p... 118 1e-24
>gb|ABK25122.1| unknown [Picea sitchensis]
Length = 572
Score = 166 bits (420), Expect = 5e-39
Identities = 86/204 (42%), Positives = 132/204 (64%)
Frame = +3
Query: 3 FDKVVRVAKTLKDSPSIEVSLSQLNALGFVPSHREVLKVMSIVDGEWKACLSIFHWAVSH 182
F+KV+ + K L P IE + + L+ GF+PS V K++ + + KA +F WA S
Sbjct: 108 FNKVLSITKDLHSLP-IEEARTALDDCGFIPSPNLVQKLLRRLQYDGKAAFRVFQWAGSQ 166
Query: 183 AKRKSEKVELYHTIIAILVRHKRFALAWGLIDKMKEQGKVSKETLRIMMEGYIEADDVGR 362
S V +YHT+I+IL H++F WGLI KM E+ V+++TL IM++ Y A D +
Sbjct: 167 PDY-SHTVSVYHTMISILGVHRKFDKGWGLIRKMHERAMVNRQTLMIMIKRYAAAHDARK 225
Query: 363 ATRTFSHMEYYRLSSSYEDLLWILQMLCRHMYIEDAELLMYKNKKIFPLDIKSFNVVLDA 542
A +TF M+ ++L++ +D L +L LCR+M++E+AE L++ NKK +PL+ KSFNV+L
Sbjct: 226 AIKTFHAMDKFKLAADSDDFLCLLCALCRNMFVEEAEELIHFNKKCYPLETKSFNVILYG 285
Query: 543 WCNIMDDKRAVKRVWEKLADHCIT 614
WCNI D VKR+WE++++ CIT
Sbjct: 286 WCNIFVDVYQVKRLWEEMSNLCIT 309
>ref|XP_002319140.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550324994|gb|EEE95063.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 518
Score = 130 bits (327), Expect = 3e-28
Identities = 72/204 (35%), Positives = 114/204 (55%), Gaps = 5/204 (2%)
Frame = +3
Query: 3 FDKVVRVAKTLKDSPSIEVSL-SQLNALGFVPSHREVLKVMSIVDGEWKACLSIFHWAVS 179
F + L++S V + S++ G S VL+V+S V +W+A + F WA +
Sbjct: 22 FQDAKTIVNILQESCDNRVEMKSKIEQCGIKVSQELVLEVLSRVRNDWEAAFTFFLWA-A 80
Query: 180 HAKRKSEKVELYHTIIAILVRHKRFALAWGLIDKMKEQ----GKVSKETLRIMMEGYIEA 347
+ V YH++I+IL + ++F AW LID+M+ V+ +TL IM+ Y
Sbjct: 81 RQPGYAHSVREYHSMISILGKMRKFDTAWVLIDEMRGVKTGVSLVTPQTLLIMIRKYCAV 140
Query: 348 DDVGRATRTFSHMEYYRLSSSYEDLLWILQMLCRHMYIEDAELLMYKNKKIFPLDIKSFN 527
DVGRA TF + ++ E+ +L LCR+ ++DAE LMY NK +FPL+ KSFN
Sbjct: 141 HDVGRAINTFYAYKRFKFDMGIEEFQSLLSALCRYKNVQDAEQLMYCNKAVFPLNTKSFN 200
Query: 528 VVLDAWCNIMDDKRAVKRVWEKLA 599
+VL+ WCN++ R +RVW +++
Sbjct: 201 IVLNGWCNLIGSPRESERVWREMS 224
>ref|XP_006387693.1| hypothetical protein POPTR_0671s00210g [Populus trichocarpa]
gi|550308165|gb|ERP46607.1| hypothetical protein
POPTR_0671s00210g [Populus trichocarpa]
Length = 599
Score = 130 bits (327), Expect = 3e-28
Identities = 72/204 (35%), Positives = 114/204 (55%), Gaps = 5/204 (2%)
Frame = +3
Query: 3 FDKVVRVAKTLKDSPSIEVSL-SQLNALGFVPSHREVLKVMSIVDGEWKACLSIFHWAVS 179
F + L++S V + S++ G S VL+V+S V +W+A + F WA +
Sbjct: 103 FQDAKTIVNILQESCDNRVEMKSKIEQCGIKVSQELVLEVLSRVRNDWEAAFTFFLWA-A 161
Query: 180 HAKRKSEKVELYHTIIAILVRHKRFALAWGLIDKMKEQ----GKVSKETLRIMMEGYIEA 347
+ V YH++I+IL + ++F AW LID+M+ V+ +TL IM+ Y
Sbjct: 162 RQPGYAHSVREYHSMISILGKMRKFDTAWVLIDEMRGVKTGVSLVTPQTLLIMIRKYCAV 221
Query: 348 DDVGRATRTFSHMEYYRLSSSYEDLLWILQMLCRHMYIEDAELLMYKNKKIFPLDIKSFN 527
DVGRA TF + ++ E+ +L LCR+ ++DAE LMY NK +FPL+ KSFN
Sbjct: 222 HDVGRAINTFYAYKRFKFDMGIEEFQSLLSALCRYKNVQDAEQLMYCNKAVFPLNTKSFN 281
Query: 528 VVLDAWCNIMDDKRAVKRVWEKLA 599
+VL+ WCN++ R +RVW +++
Sbjct: 282 IVLNGWCNLIGSPRESERVWREMS 305
>ref|XP_002319139.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 130 bits (327), Expect = 3e-28
Identities = 72/204 (35%), Positives = 114/204 (55%), Gaps = 5/204 (2%)
Frame = +3
Query: 3 FDKVVRVAKTLKDSPSIEVSL-SQLNALGFVPSHREVLKVMSIVDGEWKACLSIFHWAVS 179
F + L++S V + S++ G S VL+V+S V +W+A + F WA +
Sbjct: 22 FQDAKTIVNILQESCDNRVEMKSKIEQCGIKVSQELVLEVLSRVRNDWEAAFTFFLWA-A 80
Query: 180 HAKRKSEKVELYHTIIAILVRHKRFALAWGLIDKMKEQ----GKVSKETLRIMMEGYIEA 347
+ V YH++I+IL + ++F AW LID+M+ V+ +TL IM+ Y
Sbjct: 81 RQPGYAHSVREYHSMISILGKMRKFDTAWVLIDEMRGVKTGVSLVTPQTLLIMIRKYCAV 140
Query: 348 DDVGRATRTFSHMEYYRLSSSYEDLLWILQMLCRHMYIEDAELLMYKNKKIFPLDIKSFN 527
DVGRA TF + ++ E+ +L LCR+ ++DAE LMY NK +FPL+ KSFN
Sbjct: 141 HDVGRAINTFYAYKRFKFDMGIEEFQSLLSALCRYKNVQDAEQLMYCNKAVFPLNTKSFN 200
Query: 528 VVLDAWCNIMDDKRAVKRVWEKLA 599
+VL+ WCN++ R +RVW +++
Sbjct: 201 IVLNGWCNLIGSPRESERVWREMS 224
>ref|XP_006443350.1| hypothetical protein CICLE_v10019425mg [Citrus clementina]
gi|568850720|ref|XP_006479049.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Citrus sinensis]
gi|557545612|gb|ESR56590.1| hypothetical protein
CICLE_v10019425mg [Citrus clementina]
Length = 588
Score = 129 bits (324), Expect = 6e-28
Identities = 76/209 (36%), Positives = 116/209 (55%), Gaps = 9/209 (4%)
Frame = +3
Query: 12 VVRVAKTLKD-----SPSIEVSLSQLNALGFVPSHREVLKVMSIVDGEWKACLSIFHWAV 176
V++ AKTL D S +++ G S V +V+S V +W+A + F WA
Sbjct: 104 VLKDAKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAG 163
Query: 177 SHAKRKSEKVELYHTIIAILVRHKRFALAWGLIDKMK--EQGK--VSKETLRIMMEGYIE 344
+ E YHT+IAIL + ++F AW LID+M+ E G V+K+TL I++ Y
Sbjct: 164 KQSGYAHSTRE-YHTMIAILGKVRKFDTAWALIDEMRGGEPGPSLVTKQTLLILIRRYCA 222
Query: 345 ADDVGRATRTFSHMEYYRLSSSYEDLLWILQMLCRHMYIEDAELLMYKNKKIFPLDIKSF 524
DVGRA F + ++ + ED +L LCR+ ++DAE LM+ NK +FP + KSF
Sbjct: 223 VHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSF 282
Query: 525 NVVLDAWCNIMDDKRAVKRVWEKLADHCI 611
N++L+ WCNI+ R +RVW +++ I
Sbjct: 283 NIILNGWCNIIGSSREAERVWMEMSQRGI 311
>ref|XP_006286634.1| hypothetical protein CARUB_v10002473mg [Capsella rubella]
gi|482555340|gb|EOA19532.1| hypothetical protein
CARUB_v10002473mg [Capsella rubella]
Length = 580
Score = 129 bits (324), Expect = 6e-28
Identities = 72/207 (34%), Positives = 116/207 (56%), Gaps = 8/207 (3%)
Frame = +3
Query: 6 DKVV-----RVAKTLKDSPSIEVSL-SQLNALGFVPSHREVLKVMSIVDGEWKACLSIFH 167
DKVV +++K LKD S L +L PS+ V++++S +W+A + F
Sbjct: 95 DKVVSEDVGKISKLLKDCGSDRKELRDKLEGCDVKPSNELVVEILSQARNDWEAAFTFFV 154
Query: 168 WAVSHAKRKSEKVELYHTIIAILVRHKRFALAWGLIDKMKE--QGKVSKETLRIMMEGYI 341
WA + V YH++I+IL + ++F AW LID+M++ V+ +TL IM+ Y
Sbjct: 155 WA-GKQQGYVRSVREYHSMISILGKMRKFDTAWALIDEMRKFSPSLVNSQTLLIMIRKYC 213
Query: 342 EADDVGRATRTFSHMEYYRLSSSYEDLLWILQMLCRHMYIEDAELLMYKNKKIFPLDIKS 521
DVG+A TF + ++L +D +L LCR+ + DAE L++ NK +P D KS
Sbjct: 214 AVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAEHLIFCNKTTYPFDAKS 273
Query: 522 FNVVLDAWCNIMDDKRAVKRVWEKLAD 602
FN+VL+ WCN++ R +RVW ++ +
Sbjct: 274 FNIVLNGWCNVIGSPRESERVWLEMGN 300
>ref|XP_006400022.1| hypothetical protein EUTSA_v10015264mg [Eutrema salsugineum]
gi|557101112|gb|ESQ41475.1| hypothetical protein
EUTSA_v10015264mg [Eutrema salsugineum]
Length = 580
Score = 127 bits (318), Expect = 3e-27
Identities = 67/202 (33%), Positives = 113/202 (55%), Gaps = 3/202 (1%)
Frame = +3
Query: 6 DKVVRVAKTLKDSPSIEVSL-SQLNALGFVPSHREVLKVMSIVDGEWKACLSIFHWAVSH 182
+ V ++K LKD S +L PS+ V++++S+ +W+ + F WA
Sbjct: 100 EDVGTISKLLKDFGSNRKEFRDKLEQCDVKPSNELVVEILSLARNDWETAFTFFVWA-GK 158
Query: 183 AKRKSEKVELYHTIIAILVRHKRFALAWGLIDKMKE--QGKVSKETLRIMMEGYIEADDV 356
+ V YH++I+IL + ++F AW LID+M++ V+ +TL IM+ Y DV
Sbjct: 159 QQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDV 218
Query: 357 GRATRTFSHMEYYRLSSSYEDLLWILQMLCRHMYIEDAELLMYKNKKIFPLDIKSFNVVL 536
G+A TF + ++L +D +L LCR+ ++DAE L++ NK +P D KSFN+VL
Sbjct: 219 GKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVQDAEHLIFCNKDTYPFDAKSFNIVL 278
Query: 537 DAWCNIMDDKRAVKRVWEKLAD 602
+ WCN++ R +RVW ++ +
Sbjct: 279 NGWCNVVGSPREAERVWMEMGN 300
>ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297317482|gb|EFH47904.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 524
Score = 125 bits (315), Expect = 7e-27
Identities = 68/202 (33%), Positives = 113/202 (55%), Gaps = 3/202 (1%)
Frame = +3
Query: 6 DKVVRVAKTLKDSPSIEVSL-SQLNALGFVPSHREVLKVMSIVDGEWKACLSIFHWAVSH 182
+ V + K LK+ S L ++L PS+ V++++S V +W+ + F WA
Sbjct: 44 EDVGTIVKLLKNCGSDRKELRNKLEECDVKPSNELVVEILSQVRNDWETAFTFFVWA-GK 102
Query: 183 AKRKSEKVELYHTIIAILVRHKRFALAWGLIDKMKE--QGKVSKETLRIMMEGYIEADDV 356
+ V YH++I+IL + ++F AW LID+M++ V+ +TL IM+ Y DV
Sbjct: 103 QQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDV 162
Query: 357 GRATRTFSHMEYYRLSSSYEDLLWILQMLCRHMYIEDAELLMYKNKKIFPLDIKSFNVVL 536
G+A TF + ++L +D +L LCR+ + DAE L++ NK +P D KSFN+VL
Sbjct: 163 GKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAEHLIFCNKDTYPFDAKSFNIVL 222
Query: 537 DAWCNIMDDKRAVKRVWEKLAD 602
+ WCN++ R +RVW ++ +
Sbjct: 223 NGWCNVIGSPREAERVWMEMGN 244
>gb|EXB36250.1| hypothetical protein L484_013685 [Morus notabilis]
Length = 603
Score = 125 bits (314), Expect = 9e-27
Identities = 66/195 (33%), Positives = 108/195 (55%), Gaps = 4/195 (2%)
Frame = +3
Query: 27 KTLKDSPSIEVSLSQLNALGFVPSHREVLKVMSIVDGEWKACLSIFHWAVSHAKRKSEKV 206
+ L+D S +L+ V S V +V+ V +W+A + F WA + V
Sbjct: 128 RILRDGTSCSEMRRKLDQCVVVASSELVAQVLGRVRNDWEAAFTFFLWAGKQLGY-AHSV 186
Query: 207 ELYHTIIAILVRHKRFALAWGLIDKMKEQ----GKVSKETLRIMMEGYIEADDVGRATRT 374
YH++IAIL + ++F AW LID+M+ Q V+ +TL IM+ Y DVGRA T
Sbjct: 187 REYHSMIAILGKMRKFDTAWALIDEMRTQTAGPSLVAPQTLLIMIRRYCAVHDVGRAMNT 246
Query: 375 FSHMEYYRLSSSYEDLLWILQMLCRHMYIEDAELLMYKNKKIFPLDIKSFNVVLDAWCNI 554
F + + ++ +L LCR+ ++DAE L++ NK +FPL+ KSFN++L+ WCN+
Sbjct: 247 FYAYKRFNFCVGMDEFHGLLSALCRYKNVQDAEHLLFCNKNVFPLNTKSFNIILNGWCNV 306
Query: 555 MDDKRAVKRVWEKLA 599
+ R +R+W +++
Sbjct: 307 IGSPREAQRIWWEMS 321
>ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g15010, mitochondrial; Flags: Precursor
gi|332004721|gb|AED92104.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 124 bits (312), Expect = 2e-26
Identities = 67/202 (33%), Positives = 114/202 (56%), Gaps = 3/202 (1%)
Frame = +3
Query: 6 DKVVRVAKTLKDSPSIEVSL-SQLNALGFVPSHREVLKVMSIVDGEWKACLSIFHWAVSH 182
+ V +++K +KD S L ++L PS+ V++++S V +W+ + F WA
Sbjct: 95 EDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWA-GK 153
Query: 183 AKRKSEKVELYHTIIAILVRHKRFALAWGLIDKMKE--QGKVSKETLRIMMEGYIEADDV 356
+ V YH++I+IL + ++F AW LID+M++ V+ +TL IM+ Y DV
Sbjct: 154 QQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDV 213
Query: 357 GRATRTFSHMEYYRLSSSYEDLLWILQMLCRHMYIEDAELLMYKNKKIFPLDIKSFNVVL 536
G+A TF + ++L +D +L LCR+ + DA L++ NK +P D KSFN+VL
Sbjct: 214 GKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVL 273
Query: 537 DAWCNIMDDKRAVKRVWEKLAD 602
+ WCN++ R +RVW ++ +
Sbjct: 274 NGWCNVIGSPREAERVWMEMGN 295
>emb|CAC01820.1| putative protein [Arabidopsis thaliana]
Length = 532
Score = 124 bits (312), Expect = 2e-26
Identities = 67/202 (33%), Positives = 114/202 (56%), Gaps = 3/202 (1%)
Frame = +3
Query: 6 DKVVRVAKTLKDSPSIEVSL-SQLNALGFVPSHREVLKVMSIVDGEWKACLSIFHWAVSH 182
+ V +++K +KD S L ++L PS+ V++++S V +W+ + F WA
Sbjct: 55 EDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWA-GK 113
Query: 183 AKRKSEKVELYHTIIAILVRHKRFALAWGLIDKMKE--QGKVSKETLRIMMEGYIEADDV 356
+ V YH++I+IL + ++F AW LID+M++ V+ +TL IM+ Y DV
Sbjct: 114 QQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDV 173
Query: 357 GRATRTFSHMEYYRLSSSYEDLLWILQMLCRHMYIEDAELLMYKNKKIFPLDIKSFNVVL 536
G+A TF + ++L +D +L LCR+ + DA L++ NK +P D KSFN+VL
Sbjct: 174 GKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVL 233
Query: 537 DAWCNIMDDKRAVKRVWEKLAD 602
+ WCN++ R +RVW ++ +
Sbjct: 234 NGWCNVIGSPREAERVWMEMGN 255
>ref|XP_004493133.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cicer arietinum]
Length = 602
Score = 124 bits (311), Expect = 2e-26
Identities = 61/168 (36%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Frame = +3
Query: 108 VLKVMSIVDGEWKACLSIFHWAVSHAKRKSEKVELYHTIIAILVRHKRFALAWGLIDKMK 287
V++++S + +W+A + F WA + + V YH++I++L + +RF AW LI++M+
Sbjct: 150 VVEILSRIRNDWEAAFTFFLWAGKQSGY-AHSVREYHSMISVLGKMRRFDTAWALIEEMR 208
Query: 288 E----QGKVSKETLRIMMEGYIEADDVGRATRTFSHMEYYRLSSSYEDLLWILQMLCRHM 455
+ V +TL IM+ Y DVGRA TF + + L E+ +L LCR+
Sbjct: 209 GVRTGESLVIPQTLMIMIRKYCAVHDVGRAINTFYAFKRFNLRVGLEEFHGLLSALCRYK 268
Query: 456 YIEDAELLMYKNKKIFPLDIKSFNVVLDAWCNIMDDKRAVKRVWEKLA 599
+EDAE L++ NK +FPLD KSFN++L+ WC+ + R +RVWE+++
Sbjct: 269 NVEDAEHLLFCNKNVFPLDTKSFNIILNGWCSFIVSARNAERVWEEMS 316
>ref|XP_006341692.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Solanum tuberosum]
Length = 542
Score = 124 bits (310), Expect = 3e-26
Identities = 67/202 (33%), Positives = 111/202 (54%)
Frame = +3
Query: 6 DKVVRVAKTLKDSPSIEVSLSQLNALGFVPSHREVLKVMSIVDGEWKACLSIFHWAVSHA 185
++ V +A+ D S + ++ L+ G P+ V V+ + +WK +F W
Sbjct: 91 NEFVGIAQKASDFGSGDEAILFLDECGVKPNQELVFLVIWELRDQWKLAYLLFKWG---E 147
Query: 186 KRKSEKVELYHTIIAILVRHKRFALAWGLIDKMKEQGKVSKETLRIMMEGYIEADDVGRA 365
K K + + +I IL H +F+ AW LI + + +E + IM++ Y A++ G+A
Sbjct: 148 KCKCLEENTWCLMIWILGNHSKFSTAWSLIRDLLQMSTDIQEAVLIMIDRYAAANNAGKA 207
Query: 366 TRTFSHMEYYRLSSSYEDLLWILQMLCRHMYIEDAELLMYKNKKIFPLDIKSFNVVLDAW 545
+TF +E + +S LL L +LC+H +IE+AE M NKK+FPL+I FN++L+ W
Sbjct: 208 IQTFQILEKFSMSPDQRTLLTFLNILCKHGFIEEAEEFMLINKKLFPLEIDGFNIILNGW 267
Query: 546 CNIMDDKRAVKRVWEKLADHCI 611
CNI+ D KRVW +++ CI
Sbjct: 268 CNIVVDIFEAKRVWREMSKCCI 289
>ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Vitis vinifera]
Length = 566
Score = 124 bits (310), Expect = 3e-26
Identities = 66/205 (32%), Positives = 110/205 (53%), Gaps = 6/205 (2%)
Frame = +3
Query: 15 VRVAKTLKDSPSIEVSL--SQLNALGFVPSHREVLKVMSIVDGEWKACLSIFHWAVSHAK 188
VR + P +SL +L + G S V++V+S V W+A + F WA
Sbjct: 83 VRRIVDILQEPGSSMSLVKHKLESCGVAASSELVVEVLSRVRNHWEAAFTFFLWAAKQPG 142
Query: 189 RKSEKVELYHTIIAILVRHKRFALAWGLIDKMKE----QGKVSKETLRIMMEGYIEADDV 356
+ + YH++I+IL + ++F AW LID+M+ V+ TL IM+ Y DV
Sbjct: 143 Y-AHSLRAYHSMISILGKMRKFDTAWALIDEMRGGRTGTSLVTPHTLSIMIRRYCAVHDV 201
Query: 357 GRATRTFSHMEYYRLSSSYEDLLWILQMLCRHMYIEDAELLMYKNKKIFPLDIKSFNVVL 536
G+A TF + ++ E+ +L LCR+ ++DAE L++ N+ +FP D KSFN++L
Sbjct: 202 GKAINTFYAHKQFKFGVGIEEFQNLLSALCRYKNVQDAEQLLFCNRNVFPFDTKSFNIIL 261
Query: 537 DAWCNIMDDKRAVKRVWEKLADHCI 611
+ WCN++ R +R W ++++ I
Sbjct: 262 NGWCNVIGSMREAERFWREMSNRGI 286
>ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499595|gb|AES80798.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 585
Score = 122 bits (307), Expect = 6e-26
Identities = 59/168 (35%), Positives = 99/168 (58%), Gaps = 4/168 (2%)
Frame = +3
Query: 108 VLKVMSIVDGEWKACLSIFHWAVSHAKRKSEKVELYHTIIAILVRHKRFALAWGLIDKMK 287
V++V+S V +W+A + F WA V YH++I++L + +RF AW L+++M+
Sbjct: 134 VVEVLSRVRNDWEAAFTFFLWA-GKQPGYDHSVREYHSMISVLGKMRRFDTAWALVEEMR 192
Query: 288 E----QGKVSKETLRIMMEGYIEADDVGRATRTFSHMEYYRLSSSYEDLLWILQMLCRHM 455
+ V+ +TL IM+ Y DVGRA TF + + + +L LCR+
Sbjct: 193 RGKTGESIVTPQTLLIMIRKYCAVHDVGRAINTFYAFKRFNFQVGLYEFQGLLSALCRYK 252
Query: 456 YIEDAELLMYKNKKIFPLDIKSFNVVLDAWCNIMDDKRAVKRVWEKLA 599
++DAE L++ NK +FPLD KSFN++L+ WCN++ R +R+WE+++
Sbjct: 253 NVQDAEHLLFCNKNVFPLDTKSFNIILNGWCNLIVSARNAERIWEEMS 300
>ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535282|gb|EEF36959.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 581
Score = 122 bits (306), Expect = 8e-26
Identities = 63/181 (34%), Positives = 101/181 (55%), Gaps = 4/181 (2%)
Frame = +3
Query: 66 SQLNALGFVPSHREVLKVMSIVDGEWKACLSIFHWAVSHAKRKSEKVELYHTIIAILVRH 245
+++ G S VL+V+S + +W+A + F WA S V YH +I+IL +
Sbjct: 116 NKIEHCGVKVSRELVLEVLSRIRNDWEAAFTFFLWA-GRQLGYSHSVREYHAMISILGKM 174
Query: 246 KRFALAWGLIDKMKEQ----GKVSKETLRIMMEGYIEADDVGRATRTFSHMEYYRLSSSY 413
++F AW LID+M+ V+ +TL IM+ Y DVGRA TF + ++
Sbjct: 175 RKFDTAWALIDEMRGVKTGISLVTPQTLLIMIRKYCAVHDVGRAINTFYAHKRFKFDLGI 234
Query: 414 EDLLWILQMLCRHMYIEDAELLMYKNKKIFPLDIKSFNVVLDAWCNIMDDKRAVKRVWEK 593
++ +L LCR+ ++DAE LM+ NK +FP + KSFN+VL+ WCN++ R R+W +
Sbjct: 235 DEFQSLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIVLNGWCNVIGSPREADRIWRE 294
Query: 594 L 596
+
Sbjct: 295 M 295
>gb|EMJ04381.1| hypothetical protein PRUPE_ppa025136mg, partial [Prunus persica]
Length = 478
Score = 120 bits (302), Expect = 2e-25
Identities = 57/164 (34%), Positives = 99/164 (60%)
Frame = +3
Query: 108 VLKVMSIVDGEWKACLSIFHWAVSHAKRKSEKVELYHTIIAILVRHKRFALAWGLIDKMK 287
V++V+S V +W++ + F WA + + YH +I+I+ + ++F AWGLID+M+
Sbjct: 31 VVEVLSRVRNDWESAFAFFLWA-GKQPGYAHSLREYHCMISIMGKMRKFDTAWGLIDEMR 89
Query: 288 EQGKVSKETLRIMMEGYIEADDVGRATRTFSHMEYYRLSSSYEDLLWILQMLCRHMYIED 467
V+ TL IM+ Y DVG+A TF + + L + +D +L LCR+ +++
Sbjct: 90 GLSLVTPHTLLIMIRKYSCVHDVGKAINTFYAYKRFNLVAGMDDFHGLLSALCRYKNVQE 149
Query: 468 AELLMYKNKKIFPLDIKSFNVVLDAWCNIMDDKRAVKRVWEKLA 599
AE L++ N+ +FP + KSFN++L+ WCNI+ R +RVW +++
Sbjct: 150 AEQLLFCNRNVFPFNTKSFNIILNGWCNIIVSPREAERVWTEMS 193
>ref|XP_004235894.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Solanum lycopersicum]
Length = 542
Score = 120 bits (302), Expect = 2e-25
Identities = 63/180 (35%), Positives = 99/180 (55%)
Frame = +3
Query: 72 LNALGFVPSHREVLKVMSIVDGEWKACLSIFHWAVSHAKRKSEKVELYHTIIAILVRHKR 251
L+ G P+ V V+ + +WK +F W K K + + +I IL H +
Sbjct: 113 LDECGVKPNQELVFLVIWELRDQWKLAYLLFKWG---EKCKCLEENTWCLMIWILGNHSK 169
Query: 252 FALAWGLIDKMKEQGKVSKETLRIMMEGYIEADDVGRATRTFSHMEYYRLSSSYEDLLWI 431
F+ AW LI + + ++ + IM++ Y AD+ G+A TF +E + +S LL
Sbjct: 170 FSTAWSLIRDLLQMSTDIQQAVLIMIDRYAAADNAGKAIHTFQILEKFSMSPDQRTLLTF 229
Query: 432 LQMLCRHMYIEDAELLMYKNKKIFPLDIKSFNVVLDAWCNIMDDKRAVKRVWEKLADHCI 611
L +LC+H +IE+AE M NKK+FPL+I FN++L+ WCNI+ D KRVW +++ CI
Sbjct: 230 LNILCKHGFIEEAEEFMLINKKLFPLEIDGFNIILNGWCNIVVDIFEAKRVWREMSKCCI 289
>ref|XP_006829770.1| hypothetical protein AMTR_s00119p00029960 [Amborella trichopoda]
gi|548835351|gb|ERM97186.1| hypothetical protein
AMTR_s00119p00029960 [Amborella trichopoda]
Length = 581
Score = 119 bits (299), Expect = 5e-25
Identities = 63/183 (34%), Positives = 96/183 (52%), Gaps = 6/183 (3%)
Frame = +3
Query: 72 LNALGFVPSHREVLKVMSIVDGEWKACLSIFHWAVSHAKRKSEKVELYHTIIAILVRHKR 251
L G S V++V+S +W A + F WA + + YHT+I+IL + +R
Sbjct: 127 LEQCGIEASSDLVIRVLSKFRNDWAAAFTFFLWA-GKQPGYTHSIRAYHTMISILGKMRR 185
Query: 252 FALAWGLIDKMK------EQGKVSKETLRIMMEGYIEADDVGRATRTFSHMEYYRLSSSY 413
F AW L+D+M+ V+ +TL IM+ Y A DVG A TF + ++
Sbjct: 186 FDTAWALVDEMRGRHSGTSMSMVTPQTLLIMVRKYCAAHDVGNAINTFYTFKKFKFEVGI 245
Query: 414 EDLLWILQMLCRHMYIEDAELLMYKNKKIFPLDIKSFNVVLDAWCNIMDDKRAVKRVWEK 593
+ +L LCR+ +EDAE L+Y NK FP + KSFN++L+ W NI+ + R KR W
Sbjct: 246 NEFQDLLSALCRYKNVEDAEHLLYSNKDTFPFETKSFNIILNGWGNIVGNLREAKRTWRD 305
Query: 594 LAD 602
+ +
Sbjct: 306 MCN 308
>gb|EOY26078.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 554
Score = 118 bits (295), Expect = 1e-24
Identities = 60/184 (32%), Positives = 100/184 (54%)
Frame = +3
Query: 60 SLSQLNALGFVPSHREVLKVMSIVDGEWKACLSIFHWAVSHAKRKSEKVELYHTIIAILV 239
+++ L+ G + V V+ + EW+ F W K + Y +I +L
Sbjct: 115 AMASLDESGIKATQDLVYSVIGTLREEWRLAFLAFKWG---EKCGNTGENTYELMIWVLG 171
Query: 240 RHKRFALAWGLIDKMKEQGKVSKETLRIMMEGYIEADDVGRATRTFSHMEYYRLSSSYED 419
H++F +AW LI + ++ + IM++ Y A D +A +TF ME +R++ E
Sbjct: 172 NHRKFNMAWCLIRDLFRSSMDTRRAMFIMIDRYAAASDPCKAIQTFHTMEKFRMTPDEEA 231
Query: 420 LLWILQMLCRHMYIEDAELLMYKNKKIFPLDIKSFNVVLDAWCNIMDDKRAVKRVWEKLA 599
+L LCR+ Y+E+AE +M +NKK+FPL+ FN+VL+ WCNI+ D KRVW +++
Sbjct: 232 FRTLLNALCRYGYVEEAEEIMLQNKKLFPLETDGFNIVLNGWCNILVDVVEAKRVWREMS 291
Query: 600 DHCI 611
+CI
Sbjct: 292 KYCI 295