BLASTX nr result

ID: Ephedra26_contig00022606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00022606
         (590 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280664.2| PREDICTED: ATP-dependent DNA helicase recG-l...    74   3e-11
emb|CBI26906.3| unnamed protein product [Vitis vinifera]               72   1e-10
ref|XP_006849744.1| hypothetical protein AMTR_s00024p00249000 [A...    70   4e-10
dbj|BAM17499.1| RecG [Physcomitrella patens]                           69   1e-09
gb|EOY00966.1| DEAD/DEAH box RNA helicase family protein isoform...    64   4e-08
gb|EOY00965.1| DEAD/DEAH box RNA helicase family protein isoform...    64   4e-08
gb|EMJ28249.1| hypothetical protein PRUPE_ppa001035mg [Prunus pe...    60   3e-07
ref|XP_004298465.1| PREDICTED: ATP-dependent DNA helicase RecG-l...    59   1e-06

>ref|XP_002280664.2| PREDICTED: ATP-dependent DNA helicase recG-like [Vitis vinifera]
          Length = 1036

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 37/108 (34%), Positives = 62/108 (57%)
 Frame = +1

Query: 160 NGDSTAAEHELMVAIFLEVQSGFDNVQGRTMRFSKFLYSRIMSLLPALRYKSHQVRLEDI 339
           + D   +E  L +AI  E + G+ N  GR MRFS FL S+I  L    ++K  +  L+++
Sbjct: 41  SADECCSEKPLRIAIAFEAERGYQNALGRKMRFSNFLLSKISKLCSRSKHKFPEKLLDEV 100

Query: 340 MNYEELATSERSKLLDKVSLLFGFSNARDLVGHISASRDSAFGLSSGV 483
            +Y + + S+RSKLL+KVS+L G+ +  DL+ +    ++S   L   +
Sbjct: 101 DSYGKASISDRSKLLNKVSVLMGYDSLHDLIENERVQKESDMNLKDEI 148


>emb|CBI26906.3| unnamed protein product [Vitis vinifera]
          Length = 988

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 36/102 (35%), Positives = 60/102 (58%)
 Frame = +1

Query: 178 AEHELMVAIFLEVQSGFDNVQGRTMRFSKFLYSRIMSLLPALRYKSHQVRLEDIMNYEEL 357
           +E  L +AI  E + G+ N  GR MRFS FL S+I  L    ++K  +  L+++ +Y + 
Sbjct: 16  SEKPLRIAIAFEAERGYQNALGRKMRFSNFLLSKISKLCSRSKHKFPEKLLDEVDSYGKA 75

Query: 358 ATSERSKLLDKVSLLFGFSNARDLVGHISASRDSAFGLSSGV 483
           + S+RSKLL+KVS+L G+ +  DL+ +    ++S   L   +
Sbjct: 76  SISDRSKLLNKVSVLMGYDSLHDLIENERVQKESDMNLKDEI 117


>ref|XP_006849744.1| hypothetical protein AMTR_s00024p00249000 [Amborella trichopoda]
           gi|548853319|gb|ERN11325.1| hypothetical protein
           AMTR_s00024p00249000 [Amborella trichopoda]
          Length = 1027

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 37/98 (37%), Positives = 60/98 (61%)
 Frame = +1

Query: 181 EHELMVAIFLEVQSGFDNVQGRTMRFSKFLYSRIMSLLPALRYKSHQVRLEDIMNYEELA 360
           +  L  AI+ EVQ G+ N  G +MRFSKFL+S+++ +     +KS +  L +   Y   +
Sbjct: 15  DKHLASAIYYEVQRGYRNAIGGSMRFSKFLFSKLLKICTRSNHKSAKKLLGEADKYGTSS 74

Query: 361 TSERSKLLDKVSLLFGFSNARDLVGHISASRDSAFGLS 474
             +R+ LL+KVS+  G+++ RDL+ H  A R+SA  L+
Sbjct: 75  MFDRTDLLNKVSVFMGYNSVRDLMEHERARRESAADLN 112


>dbj|BAM17499.1| RecG [Physcomitrella patens]
          Length = 1152

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
 Frame = +1

Query: 112 SRKMRGSRICSILTSANGDSTAAEH-ELMVAIFLEVQSGFDNVQGRTMRFSKFLYSRIMS 288
           +R+   S++C   TS+ G+    +  +L+ AI  E Q GF NV G   RF +FLY+++ S
Sbjct: 107 TRRRSLSQVC---TSSEGEVVVVDDGKLLKAIVYEAQHGFSNVSGLASRFGEFLYAQL-S 162

Query: 289 LLPALRYKSHQVRLEDIMNYEELATSERSKLLDKVSLLFGFSNARDLVGHISASRDSAFG 468
           L  A           D   Y+EL +  R++LLDKV+   GF N +DL  H  A R+++ G
Sbjct: 163 LRSATGGNVFSSLENDARRYDELDSVNRAQLLDKVAQAMGFLNTQDLFAHHIALREASIG 222

Query: 469 L 471
           L
Sbjct: 223 L 223


>gb|EOY00966.1| DEAD/DEAH box RNA helicase family protein isoform 2, partial
           [Theobroma cacao]
          Length = 976

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 30/81 (37%), Positives = 49/81 (60%)
 Frame = +1

Query: 190 LMVAIFLEVQSGFDNVQGRTMRFSKFLYSRIMSLLPALRYKSHQVRLEDIMNYEELATSE 369
           L  AI  E + G+ N  GR MRF+ FL  ++  +    ++K  +  LE++ NY+  +  +
Sbjct: 20  LRSAIVFEAERGYRNALGRKMRFNNFLLDKVSKICSRSKHKFPEKLLEEVHNYDTASIVD 79

Query: 370 RSKLLDKVSLLFGFSNARDLV 432
           RSKLL+KVS+L G++   DL+
Sbjct: 80  RSKLLNKVSVLMGYNGLHDLI 100


>gb|EOY00965.1| DEAD/DEAH box RNA helicase family protein isoform 1 [Theobroma
           cacao]
          Length = 1029

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 30/81 (37%), Positives = 49/81 (60%)
 Frame = +1

Query: 190 LMVAIFLEVQSGFDNVQGRTMRFSKFLYSRIMSLLPALRYKSHQVRLEDIMNYEELATSE 369
           L  AI  E + G+ N  GR MRF+ FL  ++  +    ++K  +  LE++ NY+  +  +
Sbjct: 20  LRSAIVFEAERGYRNALGRKMRFNNFLLDKVSKICSRSKHKFPEKLLEEVHNYDTASIVD 79

Query: 370 RSKLLDKVSLLFGFSNARDLV 432
           RSKLL+KVS+L G++   DL+
Sbjct: 80  RSKLLNKVSVLMGYNGLHDLI 100


>gb|EMJ28249.1| hypothetical protein PRUPE_ppa001035mg [Prunus persica]
          Length = 927

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 33/98 (33%), Positives = 56/98 (57%)
 Frame = +1

Query: 190 LMVAIFLEVQSGFDNVQGRTMRFSKFLYSRIMSLLPALRYKSHQVRLEDIMNYEELATSE 369
           L  AI  E + G+ N  GR MRFS F++S+I  L    ++   +  L+++ +Y   + S+
Sbjct: 17  LRSAIAFEAEKGYRNALGRKMRFSNFVFSKISKLCFRSKHTFVKDALKEVDSYGIASISD 76

Query: 370 RSKLLDKVSLLFGFSNARDLVGHISASRDSAFGLSSGV 483
           RSKLL+KVS+L G+ +  +L+ +  A + S   +   V
Sbjct: 77  RSKLLNKVSVLMGYDSLHNLIENERAEKQSGMYVKDAV 114


>ref|XP_004298465.1| PREDICTED: ATP-dependent DNA helicase RecG-like [Fragaria vesca
           subsp. vesca]
          Length = 989

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 32/88 (36%), Positives = 50/88 (56%)
 Frame = +1

Query: 190 LMVAIFLEVQSGFDNVQGRTMRFSKFLYSRIMSLLPALRYKSHQVRLEDIMNYEELATSE 369
           L  AI  E + G+ N  G  MRFS FL S+I+ +    ++   +  LE+  +Y   + S+
Sbjct: 16  LRSAIAFEAEKGYRNALGSKMRFSTFLLSKILKICSRSKHTFAKSILEEADSYGIASVSD 75

Query: 370 RSKLLDKVSLLFGFSNARDLVGHISASR 453
           RSKLL+KVS+L G+    DL+ +  A +
Sbjct: 76  RSKLLNKVSVLMGYDGLHDLIENERAEK 103


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