BLASTX nr result
ID: Ephedra26_contig00022440
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00022440
(640 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004958703.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 81 2e-13
ref|XP_006658968.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 79 9e-13
ref|XP_006842523.1| hypothetical protein AMTR_s00077p00115750 [A... 79 1e-12
ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 77 4e-12
ref|XP_002520888.1| snf2 histone linker phd ring helicase, putat... 77 4e-12
gb|EOY20188.1| Zinc ion binding,DNA binding,helicases,ATP bindin... 76 7e-12
gb|EOY20187.1| Zinc ion binding,DNA binding,helicases,ATP bindin... 76 7e-12
ref|XP_006371305.1| hypothetical protein POPTR_0019s08910g [Popu... 76 9e-12
ref|XP_002329205.1| hypothetical protein POPTRDRAFT_266879 [Popu... 76 9e-12
ref|XP_006575379.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 75 1e-11
emb|CBI25341.3| unnamed protein product [Vitis vinifera] 75 1e-11
emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera] 75 1e-11
tpg|DAA64139.1| TPA: hypothetical protein ZEAMMB73_809397 [Zea m... 74 3e-11
tpg|DAA64138.1| TPA: hypothetical protein ZEAMMB73_809397 [Zea m... 74 3e-11
ref|XP_002463397.1| hypothetical protein SORBIDRAFT_02g043040 [S... 74 3e-11
ref|XP_003544845.2| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 74 4e-11
gb|ESW13318.1| hypothetical protein PHAVU_008G186300g [Phaseolus... 74 4e-11
gb|ESW13317.1| hypothetical protein PHAVU_008G186300g [Phaseolus... 74 4e-11
ref|XP_004235225.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin... 74 4e-11
gb|EMJ21511.1| hypothetical protein PRUPE_ppa000129mg [Prunus pe... 73 6e-11
>ref|XP_004958703.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Setaria italica]
Length = 1681
Score = 81.3 bits (199), Expect = 2e-13
Identities = 46/97 (47%), Positives = 62/97 (63%), Gaps = 6/97 (6%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRSKRDH------LTLKDVSLLF 477
R+GQ ++T+VHRFIVK+T+EESIYKLN+S+ + C + K + LTLKDV LF
Sbjct: 1579 RVGQDKSTFVHRFIVKKTIEESIYKLNRSRAV--CSTINRKSKNFKDEPVLTLKDVESLF 1636
Query: 476 SGEAHEGDERCHEVQGTGNLRNLAPSVAAVMAAERRQ 366
AH+ +LR+L PSVAA +AAERR+
Sbjct: 1637 PMTAHDDPLEVSNQDHDDSLRSLPPSVAAGLAAERRR 1673
>ref|XP_006658968.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Oryza brachyantha]
Length = 1650
Score = 79.3 bits (194), Expect = 9e-13
Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 6/96 (6%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRSKRDH------LTLKDVSLLF 477
R+GQ +NT++HRFIVK T+EESIYKLN+ + + C + K + LTLKD+ LF
Sbjct: 1548 RVGQDKNTFIHRFIVKNTIEESIYKLNRGRAV--CSTIHRKSKNFKDELVLTLKDIESLF 1605
Query: 476 SGEAHEGDERCHEVQGTGNLRNLAPSVAAVMAAERR 369
A + + G+LR+L PS+AA +AAERR
Sbjct: 1606 PMVASDQPSEQEDKNQGGHLRSLPPSIAAGLAAERR 1641
>ref|XP_006842523.1| hypothetical protein AMTR_s00077p00115750 [Amborella trichopoda]
gi|548844609|gb|ERN04198.1| hypothetical protein
AMTR_s00077p00115750 [Amborella trichopoda]
Length = 1697
Score = 78.6 bits (192), Expect = 1e-12
Identities = 52/99 (52%), Positives = 63/99 (63%), Gaps = 6/99 (6%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRS---KRDH--LTLKDV-SLLF 477
RIGQ + T+VHRFIVK+TVEESIYKLNK+KP P + S DH LTL+DV SL
Sbjct: 1597 RIGQDKATFVHRFIVKDTVEESIYKLNKNKP--PNSVINSNNRNNDHRSLTLRDVESLFL 1654
Query: 476 SGEAHEGDERCHEVQGTGNLRNLAPSVAAVMAAERRQRQ 360
SG+ E + NL +L PSVAA +AAE R +Q
Sbjct: 1655 SGK--PSSEPLENGNSSENLTHLPPSVAAALAAENRLKQ 1691
>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
Length = 1704
Score = 77.0 bits (188), Expect = 4e-12
Identities = 48/99 (48%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRSKRDH---LTLKDVSLLFSGE 468
RIGQ T VHRFIVK+TVEESIYKLN+S+ + +K LTLKD+ LF+
Sbjct: 1596 RIGQENRTLVHRFIVKDTVEESIYKLNRSRNTNSFISGNTKNQDQPLLTLKDLEALFTPV 1655
Query: 467 AHEGDERCHEVQGTGNLRNLAPSVAAVMAAERRQRQLET 351
+ E + TG+L +L PSVAA +AAERR ++ ET
Sbjct: 1656 PSSVPQ--SEEKPTGSLMHLPPSVAAAIAAERRLKETET 1692
>ref|XP_002520888.1| snf2 histone linker phd ring helicase, putative [Ricinus communis]
gi|223540019|gb|EEF41597.1| snf2 histone linker phd ring
helicase, putative [Ricinus communis]
Length = 1588
Score = 77.0 bits (188), Expect = 4e-12
Identities = 47/96 (48%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRSKRDH---LTLKDVSLLFSGE 468
RIGQ T VHRF+VK TVEESIYKLN+S+ + +K LTLKDV LF+
Sbjct: 1495 RIGQENRTLVHRFMVKNTVEESIYKLNRSRNTSSFISGNTKNQDQQLLTLKDVESLFTST 1554
Query: 467 AHEGDERCHEVQGTGNLRNLAPSVAAVMAAERRQRQ 360
+GDE T +LR+L PS AA +AAERR ++
Sbjct: 1555 VPKGDEEL-----TESLRHLPPSAAAAIAAERRLKE 1585
>gb|EOY20188.1| Zinc ion binding,DNA binding,helicases,ATP binding,nucleic acid
binding isoform 2 [Theobroma cacao]
Length = 1666
Score = 76.3 bits (186), Expect = 7e-12
Identities = 51/94 (54%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRSKRDH--LTLKDVSLLFSGEA 465
RIGQ T VHRFIVK TVEESIYKLN+S+ +D LTLKDV LF+ A
Sbjct: 1572 RIGQENRTLVHRFIVKNTVEESIYKLNRSRNSSGFVGNTRNQDQPVLTLKDVESLFAA-A 1630
Query: 464 HEGDERCHEVQGTGNLRNLAPSVAAVMAAERRQR 363
+ DE+ E + +LRNL PSVAA +AAERR R
Sbjct: 1631 PKTDEKPTESE---SLRNLPPSVAAAIAAERRLR 1661
>gb|EOY20187.1| Zinc ion binding,DNA binding,helicases,ATP binding,nucleic acid
binding isoform 1 [Theobroma cacao]
Length = 1682
Score = 76.3 bits (186), Expect = 7e-12
Identities = 51/94 (54%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRSKRDH--LTLKDVSLLFSGEA 465
RIGQ T VHRFIVK TVEESIYKLN+S+ +D LTLKDV LF+ A
Sbjct: 1588 RIGQENRTLVHRFIVKNTVEESIYKLNRSRNSSGFVGNTRNQDQPVLTLKDVESLFAA-A 1646
Query: 464 HEGDERCHEVQGTGNLRNLAPSVAAVMAAERRQR 363
+ DE+ E + +LRNL PSVAA +AAERR R
Sbjct: 1647 PKTDEKPTESE---SLRNLPPSVAAAIAAERRLR 1677
>ref|XP_006371305.1| hypothetical protein POPTR_0019s08910g [Populus trichocarpa]
gi|550317057|gb|ERP49102.1| hypothetical protein
POPTR_0019s08910g [Populus trichocarpa]
Length = 1680
Score = 75.9 bits (185), Expect = 9e-12
Identities = 48/96 (50%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRSKRDH---LTLKDVSLLFSGE 468
RIGQ + T VHRFIVK+TVEESIYKLN+S+ + +K LTLKDV LF+
Sbjct: 1580 RIGQEQRTLVHRFIVKDTVEESIYKLNRSRSTSSFISGNTKNQDQPLLTLKDVESLFATV 1639
Query: 467 AHEGDERCHEVQGTGNLRNLAPSVAAVMAAERRQRQ 360
E + + T NLR+L PSVAA +AAERR ++
Sbjct: 1640 PSTVPE--SDGKPTENLRHLPPSVAAALAAERRLKE 1673
>ref|XP_002329205.1| hypothetical protein POPTRDRAFT_266879 [Populus trichocarpa]
Length = 166
Score = 75.9 bits (185), Expect = 9e-12
Identities = 48/96 (50%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRSKRDH---LTLKDVSLLFSGE 468
RIGQ + T VHRFIVK+TVEESIYKLN+S+ + +K LTLKDV LF+
Sbjct: 73 RIGQEQRTLVHRFIVKDTVEESIYKLNRSRSTSSFISGNTKNQDQPLLTLKDVESLFATV 132
Query: 467 AHEGDERCHEVQGTGNLRNLAPSVAAVMAAERRQRQ 360
E + + T NLR+L PSVAA +AAERR ++
Sbjct: 133 PSTVPE--SDGKPTENLRHLPPSVAAALAAERRLKE 166
>ref|XP_006575379.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like isoform X1 [Glycine
max] gi|571441227|ref|XP_006575380.1| PREDICTED: E3
ubiquitin-protein ligase SHPRH-like isoform X2 [Glycine
max]
Length = 1671
Score = 75.5 bits (184), Expect = 1e-11
Identities = 47/99 (47%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRSKRDH---LTLKDVSLLFSGE 468
RIGQ T +HRFIVK+TVEESIYKLN+S+ + + +K LTLKDV L S
Sbjct: 1573 RIGQKNKTLIHRFIVKDTVEESIYKLNRSRSNHSFISGNTKNQDQPVLTLKDVEALLSRA 1632
Query: 467 AHEGDERCHEVQGTGNLRNLAPSVAAVMAAERRQRQLET 351
E NLR+L PSVAA +AAERR + T
Sbjct: 1633 PLTMPESDENPNRDTNLRHLPPSVAAAVAAERRLNEQRT 1671
>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
Length = 1717
Score = 75.5 bits (184), Expect = 1e-11
Identities = 48/99 (48%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRSKRDH---LTLKDVSLLFSGE 468
RIGQ T VHRFIVK+TVEESIYKLN+S+ + +K LTLKD+ LF+
Sbjct: 1621 RIGQENRTLVHRFIVKDTVEESIYKLNRSRNTNSFISGNTKNQDQPLLTLKDLEALFTPV 1680
Query: 467 AHEGDERCHEVQGTGNLRNLAPSVAAVMAAERRQRQLET 351
+ E + TG+L +L PSVAA +AAERR +Q T
Sbjct: 1681 PSSVPQ--SEEKPTGSLMHLPPSVAAAIAAERRLKQQAT 1717
>emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]
Length = 2416
Score = 75.5 bits (184), Expect = 1e-11
Identities = 48/99 (48%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRSKRDH---LTLKDVSLLFSGE 468
RIGQ T VHRFIVK+TVEESIYKLN+S+ + +K LTLKD+ LF+
Sbjct: 2320 RIGQENRTLVHRFIVKDTVEESIYKLNRSRNTNSFISGNTKNQDQPLLTLKDLEALFTPV 2379
Query: 467 AHEGDERCHEVQGTGNLRNLAPSVAAVMAAERRQRQLET 351
+ E + TG+L +L PSVAA +AAERR +Q T
Sbjct: 2380 PSSVPQ--SEEKPTGSLMHLPPSVAAAIAAERRLKQQAT 2416
>tpg|DAA64139.1| TPA: hypothetical protein ZEAMMB73_809397 [Zea mays]
Length = 588
Score = 74.3 bits (181), Expect = 3e-11
Identities = 44/97 (45%), Positives = 61/97 (62%), Gaps = 6/97 (6%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRSKRDH------LTLKDVSLLF 477
R+GQ ++T+VHRFIVK+T+EESIYKLN+S+ + C + K + LTLKDV LF
Sbjct: 490 RVGQDKSTFVHRFIVKKTIEESIYKLNRSRAV--CSTINRKSKNFKDEPVLTLKDVESLF 547
Query: 476 SGEAHEGDERCHEVQGTGNLRNLAPSVAAVMAAERRQ 366
+ + +LR+L PSVAA +AAERR+
Sbjct: 548 PMAGPDEPLEQADQNYGDSLRSLPPSVAAGLAAERRR 584
>tpg|DAA64138.1| TPA: hypothetical protein ZEAMMB73_809397 [Zea mays]
Length = 449
Score = 74.3 bits (181), Expect = 3e-11
Identities = 44/97 (45%), Positives = 61/97 (62%), Gaps = 6/97 (6%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRSKRDH------LTLKDVSLLF 477
R+GQ ++T+VHRFIVK+T+EESIYKLN+S+ + C + K + LTLKDV LF
Sbjct: 351 RVGQDKSTFVHRFIVKKTIEESIYKLNRSRAV--CSTINRKSKNFKDEPVLTLKDVESLF 408
Query: 476 SGEAHEGDERCHEVQGTGNLRNLAPSVAAVMAAERRQ 366
+ + +LR+L PSVAA +AAERR+
Sbjct: 409 PMAGPDEPLEQADQNYGDSLRSLPPSVAAGLAAERRR 445
>ref|XP_002463397.1| hypothetical protein SORBIDRAFT_02g043040 [Sorghum bicolor]
gi|241926774|gb|EER99918.1| hypothetical protein
SORBIDRAFT_02g043040 [Sorghum bicolor]
Length = 1475
Score = 74.3 bits (181), Expect = 3e-11
Identities = 44/97 (45%), Positives = 61/97 (62%), Gaps = 6/97 (6%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRSKRDH------LTLKDVSLLF 477
R+GQ ++T+VHRFIVK+T+EESIYKLN+S+ + C + K + LTLKDV LF
Sbjct: 1372 RVGQDKSTFVHRFIVKKTIEESIYKLNRSRAV--CSTINRKSKNFKDEPVLTLKDVESLF 1429
Query: 476 SGEAHEGDERCHEVQGTGNLRNLAPSVAAVMAAERRQ 366
+ + +LR+L PSVAA +AAERR+
Sbjct: 1430 PMTGPDEPLEQADQDYGDSLRSLPPSVAAGLAAERRR 1466
>ref|XP_003544845.2| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Glycine max]
Length = 236
Score = 73.9 bits (180), Expect = 4e-11
Identities = 46/99 (46%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRSKRDH---LTLKDVSLLFSGE 468
RIGQ T +HRFIVK+TVEESIYKLN+S+ + + +K LTLKDV L S
Sbjct: 138 RIGQKNKTLIHRFIVKDTVEESIYKLNRSRSNHSFISGNTKNQDQPVLTLKDVEALLSRA 197
Query: 467 AHEGDERCHEVQGTGNLRNLAPSVAAVMAAERRQRQLET 351
E NLR+L PSVA +AAERR + T
Sbjct: 198 PLTMPESDENHNTNTNLRHLPPSVATAIAAERRLNEQRT 236
>gb|ESW13318.1| hypothetical protein PHAVU_008G186300g [Phaseolus vulgaris]
Length = 1669
Score = 73.9 bits (180), Expect = 4e-11
Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRSKRDH---LTLKDVSLLFSGE 468
RIGQ T +HRFIVK+TVEES+YKLN+S+ + + +K LTLKDV L S
Sbjct: 1571 RIGQKHKTLIHRFIVKDTVEESLYKLNRSRSNHSFISGNTKNQDQPVLTLKDVEALLSRA 1630
Query: 467 AHEGDERCHEVQGTGNLRNLAPSVAAVMAAERRQRQLET 351
E + NLR+L PSVAA +AAE+R + T
Sbjct: 1631 PLTMPESEENLGTNTNLRHLPPSVAAAIAAEKRLNEQRT 1669
>gb|ESW13317.1| hypothetical protein PHAVU_008G186300g [Phaseolus vulgaris]
Length = 1629
Score = 73.9 bits (180), Expect = 4e-11
Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRSKRDH---LTLKDVSLLFSGE 468
RIGQ T +HRFIVK+TVEES+YKLN+S+ + + +K LTLKDV L S
Sbjct: 1531 RIGQKHKTLIHRFIVKDTVEESLYKLNRSRSNHSFISGNTKNQDQPVLTLKDVEALLSRA 1590
Query: 467 AHEGDERCHEVQGTGNLRNLAPSVAAVMAAERRQRQLET 351
E + NLR+L PSVAA +AAE+R + T
Sbjct: 1591 PLTMPESEENLGTNTNLRHLPPSVAAAIAAEKRLNEQRT 1629
>ref|XP_004235225.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
SHPRH-like [Solanum lycopersicum]
Length = 1681
Score = 73.9 bits (180), Expect = 4e-11
Identities = 50/97 (51%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRSKRDH---LTLKDVSLLFS-G 471
RIGQA T VHRFIVK+TVEESIYKLNKS+ I + K LTL+DV LF
Sbjct: 1577 RIGQAHKTLVHRFIVKDTVEESIYKLNKSRNIGSFVSGNRKNQDQPILTLRDVESLFRVA 1636
Query: 470 EAHEGDERCHEVQGTGNLRNLAPSVAAVMAAERRQRQ 360
A DE + T +L + PSVAA +AAERR R+
Sbjct: 1637 PAPSTDE-----EATESLNHFPPSVAASIAAERRLRE 1668
>gb|EMJ21511.1| hypothetical protein PRUPE_ppa000129mg [Prunus persica]
Length = 1710
Score = 73.2 bits (178), Expect = 6e-11
Identities = 48/102 (47%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Frame = -3
Query: 638 RIGQARNTYVHRFIVKETVEESIYKLNKSKPIYPCRAVRSKRD---HLTLKDVSLLFS-- 474
RIGQ T HRFIVK TVEESIYKLN+SK +K LTLKD+ LF+
Sbjct: 1603 RIGQKNRTIAHRFIVKGTVEESIYKLNQSKNTTAFINGNTKNQDEPFLTLKDIESLFATA 1662
Query: 473 ----GEAHEGDERCHEVQGTGNLRNLAPSVAAVMAAERRQRQ 360
EA E + + T +LR+L PSVAA +AAE+RQ++
Sbjct: 1663 PPAVPEADEKPTEGSDEKETESLRHLPPSVAAAIAAEKRQKE 1704