BLASTX nr result
ID: Ephedra26_contig00022386
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00022386
(412 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_002519956.1| ATP synthase CF0 B chain (chloroplast) [Ephe... 144 2e-32
dbj|BAH11227.1| ATP synthase CF0 B chain (chloroplast) [Welwitsc... 96 4e-18
ref|YP_001876578.1| ATP synthase CF0 subunit I [Welwitschia mira... 96 4e-18
ref|XP_003605608.1| DNA-directed RNA polymerase subunit beta, pa... 59 2e-17
ref|YP_002519781.1| ATP synthase CF0 B chain [Gnetum parvifolium... 89 5e-16
dbj|BAN16885.1| ATP synthase CF0 B chain (chloroplast) [Gnetum ula] 85 1e-14
ref|YP_007474809.1| ATP synthase CF0 B subunit (chloroplast) [Ta... 84 1e-14
ref|YP_001312177.1| ATP synthase CF0 B chain [Cycas taitungensis... 83 3e-14
ref|YP_007474674.1| ATP synthase CF0 B subunit (chloroplast) [Cy... 83 4e-14
gb|ABU85245.1| ATP synthase CF0 subunit I [Cycas micronesica] 83 4e-14
gb|AER45645.1| atpF (chloroplast) [Agathis australis] 82 7e-14
ref|YP_008082116.1| ATP synthase CF0 subunit I (chloroplast) [Cu... 80 2e-13
dbj|BAL03671.1| ATP synthase CF0 B chain (chloroplast) [Bowenia ... 80 2e-13
gb|AFM54198.1| AtpF (chloroplast) [Ceratozamia hildae] 80 4e-13
ref|YP_008965016.1| ATP synthase CF0 B chain (chloroplast) [Agat... 80 4e-13
ref|YP_008965192.1| ATP synthase CF0 B chain (chloroplast) [Calo... 79 5e-13
gb|AFM54199.1| AtpF (chloroplast) [Zamia furfuracea] 79 5e-13
gb|AER45644.1| atpF (chloroplast) [Halocarpus kirkii] 76 5e-12
gb|ACP51885.1| ATP synthase CF0 B subunit [Cedrus deodara] 75 7e-12
ref|YP_007475586.1| AtpF (chloroplast) [Podocarpus totara] gi|35... 75 1e-11
>ref|YP_002519956.1| ATP synthase CF0 B chain (chloroplast) [Ephedra equisetina]
gi|220983557|dbj|BAH11324.1| ATP synthase CF0 B chain
(chloroplast) [Ephedra equisetina]
Length = 184
Score = 144 bits (362), Expect = 2e-32
Identities = 73/85 (85%), Positives = 73/85 (85%)
Frame = +1
Query: 1 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNC 180
YLQIEEEKENLIKAASANLKQLEDSKNETVCFE SCQALRNALITLTNC
Sbjct: 100 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEQQIVIDQVRQQVSCQALRNALITLTNC 159
Query: 181 LNNELHLYIIDYNIDQLKDMKRIFD 255
LNNELHLYIIDYNIDQLKDMKRIFD
Sbjct: 160 LNNELHLYIIDYNIDQLKDMKRIFD 184
>dbj|BAH11227.1| ATP synthase CF0 B chain (chloroplast) [Welwitschia mirabilis]
Length = 152
Score = 96.3 bits (238), Expect = 4e-18
Identities = 50/81 (61%), Positives = 58/81 (71%)
Frame = +1
Query: 1 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNC 180
YLQIE+EKENLIKAASANLKQLEDSKNET+ FE S QAL+ AL + NC
Sbjct: 70 YLQIEQEKENLIKAASANLKQLEDSKNETIFFEQQKVIDQVRQQISYQALQKALAIMNNC 129
Query: 181 LNNELHLYIIDYNIDQLKDMK 243
LN +LHL +IDYNI +L+ K
Sbjct: 130 LNTDLHLRMIDYNIGRLRAKK 150
>ref|YP_001876578.1| ATP synthase CF0 subunit I [Welwitschia mirabilis]
gi|226698357|sp|B2Y1W1.1|ATPF_WELMI RecName: Full=ATP
synthase subunit b, chloroplastic; AltName: Full=ATP
synthase F(0) sector subunit b; AltName: Full=ATPase
subunit I gi|163311633|gb|ABY26791.1| ATP synthase CF0
subunit I [Welwitschia mirabilis]
Length = 182
Score = 96.3 bits (238), Expect = 4e-18
Identities = 50/81 (61%), Positives = 58/81 (71%)
Frame = +1
Query: 1 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNC 180
YLQIE+EKENLIKAASANLKQLEDSKNET+ FE S QAL+ AL + NC
Sbjct: 100 YLQIEQEKENLIKAASANLKQLEDSKNETIFFEQQKVIDQVRQQISYQALQKALAIMNNC 159
Query: 181 LNNELHLYIIDYNIDQLKDMK 243
LN +LHL +IDYNI +L+ K
Sbjct: 160 LNTDLHLRMIDYNIGRLRAKK 180
>ref|XP_003605608.1| DNA-directed RNA polymerase subunit beta, partial [Medicago
truncatula] gi|355506663|gb|AES87805.1| DNA-directed RNA
polymerase subunit beta, partial [Medicago truncatula]
Length = 561
Score = 58.9 bits (141), Expect(2) = 2e-17
Identities = 33/71 (46%), Positives = 41/71 (57%)
Frame = +1
Query: 1 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNC 180
Y +IE EK NLI + L+Q E+ KNET+ FE QAL+ AL TL +C
Sbjct: 3 YSEIEREKLNLINSIYTTLEQFENYKNETIHFEQQRAINQVQQTVLQQALQGALGTLNSC 62
Query: 181 LNNELHLYIID 213
LNNELHL I+
Sbjct: 63 LNNELHLRTIE 73
Score = 55.8 bits (133), Expect(2) = 2e-17
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +2
Query: 302 MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGD 412
M+TIR DEIS +IR++I+QYN EV+++N G VLQVGD
Sbjct: 76 MVTIRADEISKIIRERIQQYNTEVKIVNTGTVLQVGD 112
>ref|YP_002519781.1| ATP synthase CF0 B chain [Gnetum parvifolium]
gi|512721576|ref|YP_008082196.1| ATP synthase CF0 B
chain (chloroplast) [Gnetum montanum]
gi|226741461|sp|A6BM11.1|ATPF_GNEPA RecName: Full=ATP
synthase subunit b, chloroplastic; AltName: Full=ATP
synthase F(0) sector subunit b; AltName: Full=ATPase
subunit I gi|149941378|dbj|BAF64856.1| ATP synthase CF0
C subunit [Gnetum parvifolium]
gi|220983524|dbj|BAH11292.1| ATP synthase CF0 B chain
(chloroplast) [Gnetum parvifolium]
gi|490345021|gb|AGL11041.1| ATP synthase CF0 B chain
(chloroplast) [Gnetum montanum]
Length = 185
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/78 (58%), Positives = 56/78 (71%)
Frame = +1
Query: 1 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNC 180
YLQIE+EKE+L++AAS NLKQLEDSKNETV FE S QAL+ AL + NC
Sbjct: 100 YLQIEQEKEDLVQAASVNLKQLEDSKNETVSFEQQKVIDQVRQQVSYQALQKALTFMKNC 159
Query: 181 LNNELHLYIIDYNIDQLK 234
LN ELHL +I+YNI +L+
Sbjct: 160 LNTELHLRMINYNIGRLR 177
>dbj|BAN16885.1| ATP synthase CF0 B chain (chloroplast) [Gnetum ula]
Length = 185
Score = 84.7 bits (208), Expect = 1e-14
Identities = 45/78 (57%), Positives = 55/78 (70%)
Frame = +1
Query: 1 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNC 180
YLQIE+EKE+L++AAS NLKQLEDSKNETV FE S QAL+ AL + N
Sbjct: 100 YLQIEQEKEDLVQAASVNLKQLEDSKNETVSFEQQKVIDQVRQQVSYQALQKALTFMKNG 159
Query: 181 LNNELHLYIIDYNIDQLK 234
LN ELHL +I+YNI +L+
Sbjct: 160 LNTELHLRMINYNIGRLR 177
>ref|YP_007474809.1| ATP synthase CF0 B subunit (chloroplast) [Taxus mairei]
gi|372863287|gb|AEX99358.1| ATP synthase CF0 B subunit
(chloroplast) [Taxus mairei] gi|372863364|gb|AEX99434.1|
ATP synthase CF0 B subunit (chloroplast) [Taxus mairei]
gi|372863528|gb|AEX99596.1| ATP synthase CF0 B subunit
(chloroplast) [Taxus mairei]
Length = 189
Score = 84.3 bits (207), Expect = 1e-14
Identities = 47/85 (55%), Positives = 57/85 (67%)
Frame = +1
Query: 1 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNC 180
Y QIE+EKE+LI ASANL+QLE+ KNETV FE S QA++ AL TL +C
Sbjct: 105 YSQIEQEKEDLINVASANLEQLENFKNETVHFEQQRAIEQVRQQISRQAVQRALGTLNSC 164
Query: 181 LNNELHLYIIDYNIDQLKDMKRIFD 255
LN+ELHL ID+NI L+ MK I D
Sbjct: 165 LNSELHLRTIDHNIGLLRAMKNITD 189
>ref|YP_001312177.1| ATP synthase CF0 B chain [Cycas taitungensis]
gi|226741429|sp|A6H5F2.1|ATPF_CYCTA RecName: Full=ATP
synthase subunit b, chloroplastic; AltName: Full=ATP
synthase F(0) sector subunit b; AltName: Full=ATPase
subunit I gi|149941494|dbj|BAF64918.1| ATP synthase CF0
B chain (chloroplast) [Cycas taitungensis]
Length = 184
Score = 83.2 bits (204), Expect = 3e-14
Identities = 48/85 (56%), Positives = 54/85 (63%)
Frame = +1
Query: 1 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNC 180
Y QIE EKE+LI AA NL++LEDSKNETV FE S QALR AL TL +
Sbjct: 100 YSQIEREKEDLINAAHENLERLEDSKNETVNFEQQRAIDQVRQQISRQALRRALGTLNSR 159
Query: 181 LNNELHLYIIDYNIDQLKDMKRIFD 255
LNNELHL ID+NI L+ MK D
Sbjct: 160 LNNELHLRTIDHNISMLRAMKNTTD 184
>ref|YP_007474674.1| ATP synthase CF0 B subunit (chloroplast) [Cycas revoluta]
gi|372863150|gb|AEX99223.1| ATP synthase CF0 B subunit
(chloroplast) [Cycas revoluta]
Length = 182
Score = 82.8 bits (203), Expect = 4e-14
Identities = 47/82 (57%), Positives = 54/82 (65%)
Frame = +1
Query: 1 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNC 180
Y QIE EKE+LI AA NL++LEDSKNETV FE S QALR AL TL +
Sbjct: 99 YSQIEREKEDLINAAHENLERLEDSKNETVNFEQQRAIDQVRQQISRQALRRALGTLNSR 158
Query: 181 LNNELHLYIIDYNIDQLKDMKR 246
LNNELHL ID+NI L+ MK+
Sbjct: 159 LNNELHLRTIDHNISMLRAMKK 180
>gb|ABU85245.1| ATP synthase CF0 subunit I [Cycas micronesica]
Length = 183
Score = 82.8 bits (203), Expect = 4e-14
Identities = 47/82 (57%), Positives = 54/82 (65%)
Frame = +1
Query: 1 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNC 180
Y QIE EKE+LI AA NL++LEDSKNETV FE S QALR AL TL +
Sbjct: 100 YSQIEREKEDLINAAHENLERLEDSKNETVNFEQQRAIDQVRQQISRQALRRALGTLNSR 159
Query: 181 LNNELHLYIIDYNIDQLKDMKR 246
LNNELHL ID+NI L+ MK+
Sbjct: 160 LNNELHLRTIDHNISMLRAMKK 181
>gb|AER45645.1| atpF (chloroplast) [Agathis australis]
Length = 184
Score = 82.0 bits (201), Expect = 7e-14
Identities = 48/85 (56%), Positives = 56/85 (65%)
Frame = +1
Query: 1 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNC 180
Y QIE EKE+ IKAASANL+QLE+SKNETV FE S QA++ AL TL
Sbjct: 100 YSQIEREKEDFIKAASANLEQLEESKNETVHFEQQRAIEQVRQQVSRQAVQRALGTLNIR 159
Query: 181 LNNELHLYIIDYNIDQLKDMKRIFD 255
LN+ELHL ID+NI L+ MK I D
Sbjct: 160 LNSELHLRTIDHNIGLLRAMKNITD 184
>ref|YP_008082116.1| ATP synthase CF0 subunit I (chloroplast) [Cunninghamia lanceolata]
gi|490344933|gb|AGL10962.1| ATP synthase CF0 subunit I
(chloroplast) [Cunninghamia lanceolata]
Length = 184
Score = 80.5 bits (197), Expect = 2e-13
Identities = 47/85 (55%), Positives = 54/85 (63%)
Frame = +1
Query: 1 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNC 180
Y QIE+EKE LI AS NLKQLE+ KNETV FE S QA++ AL TL +
Sbjct: 100 YSQIEQEKEELINVASVNLKQLENLKNETVHFEQQRVIEQVRQQISRQAVQRALRTLNSH 159
Query: 181 LNNELHLYIIDYNIDQLKDMKRIFD 255
LN+ELHL ID+NID L MK I D
Sbjct: 160 LNSELHLRTIDHNIDLLIAMKNITD 184
>dbj|BAL03671.1| ATP synthase CF0 B chain (chloroplast) [Bowenia serrulata]
Length = 184
Score = 80.5 bits (197), Expect = 2e-13
Identities = 46/85 (54%), Positives = 54/85 (63%)
Frame = +1
Query: 1 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNC 180
Y QIE EKE+LI AA NL++LEDSKNETV FE S QALR AL TL +
Sbjct: 100 YSQIEREKEDLINAAHENLERLEDSKNETVHFEQQRAIDQVRQQISRQALRRALGTLNSR 159
Query: 181 LNNELHLYIIDYNIDQLKDMKRIFD 255
N+ELHL+ ID+NI L+ MK D
Sbjct: 160 SNSELHLHTIDHNISMLRAMKNTTD 184
>gb|AFM54198.1| AtpF (chloroplast) [Ceratozamia hildae]
Length = 184
Score = 79.7 bits (195), Expect = 4e-13
Identities = 46/85 (54%), Positives = 53/85 (62%)
Frame = +1
Query: 1 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNC 180
Y QIE EKE+LI AA NL++LEDSKNETV FE S QALR AL TL +
Sbjct: 100 YSQIEREKEDLINAAHENLERLEDSKNETVHFEQQRAIDQVRQQISHQALRRALGTLNSS 159
Query: 181 LNNELHLYIIDYNIDQLKDMKRIFD 255
N+ELHL ID+NI L+ MK D
Sbjct: 160 SNSELHLRTIDHNISMLRAMKNTTD 184
>ref|YP_008965016.1| ATP synthase CF0 B chain (chloroplast) [Agathis dammara]
gi|347977272|dbj|BAK86753.1| ATP synthase CF0 B chain
(chloroplast) [Agathis dammara]
gi|563317600|dbj|BAO19700.1| ATP synthase CF0 B chain
(chloroplast) [Agathis dammara]
Length = 182
Score = 79.7 bits (195), Expect = 4e-13
Identities = 46/82 (56%), Positives = 55/82 (67%)
Frame = +1
Query: 1 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNC 180
Y QIE EKE+ IKAASANL+QLE+SKNETV FE S QA++ AL TL
Sbjct: 100 YSQIEREKEDFIKAASANLEQLEESKNETVHFEQQRAIEQVRQQVSRQAVQRALGTLNIR 159
Query: 181 LNNELHLYIIDYNIDQLKDMKR 246
LN+ELHL ID+NI L+ MK+
Sbjct: 160 LNSELHLRTIDHNIGLLRAMKK 181
>ref|YP_008965192.1| ATP synthase CF0 B chain (chloroplast) [Calocedrus formosana]
gi|482840944|dbj|BAN16938.1| ATP synthase CF0 B chain
(chloroplast) [Calocedrus formosana]
gi|563317777|dbj|BAO19875.1| ATP synthase CF0 B chain
(chloroplast) [Calocedrus formosana]
Length = 184
Score = 79.3 bits (194), Expect = 5e-13
Identities = 46/85 (54%), Positives = 54/85 (63%)
Frame = +1
Query: 1 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNC 180
Y QI++EKE LI AS NLKQLE+ KNETV FE S QA++ AL TL N
Sbjct: 100 YSQIQQEKEELINLASVNLKQLENLKNETVHFEQQRVIEQVRQQISRQAVQRALGTLNNR 159
Query: 181 LNNELHLYIIDYNIDQLKDMKRIFD 255
LN+ELHL I++NID L MK I D
Sbjct: 160 LNSELHLRTIEHNIDLLLAMKNITD 184
>gb|AFM54199.1| AtpF (chloroplast) [Zamia furfuracea]
Length = 184
Score = 79.3 bits (194), Expect = 5e-13
Identities = 46/85 (54%), Positives = 53/85 (62%)
Frame = +1
Query: 1 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNC 180
Y QIE EKE+LI AA NL++LEDSKNETV FE S QALR AL TL +
Sbjct: 100 YSQIEREKEDLINAAHENLERLEDSKNETVHFEQQRAIDQVRQQISRQALRRALGTLNSR 159
Query: 181 LNNELHLYIIDYNIDQLKDMKRIFD 255
N+ELHL ID+NI L+ MK D
Sbjct: 160 SNSELHLRAIDHNISMLRTMKNTTD 184
>gb|AER45644.1| atpF (chloroplast) [Halocarpus kirkii]
Length = 184
Score = 75.9 bits (185), Expect = 5e-12
Identities = 43/85 (50%), Positives = 54/85 (63%)
Frame = +1
Query: 1 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNC 180
Y QI+ EKE+ I A SANL+QLEDSKNET+ E S QA++ AL TL +
Sbjct: 100 YSQIKREKEHFINATSANLEQLEDSKNETIRLEQQRVIEQVQQQVSRQAVQRALRTLNSR 159
Query: 181 LNNELHLYIIDYNIDQLKDMKRIFD 255
LN+ELHL ID++I L+ MK I D
Sbjct: 160 LNSELHLRTIDHHIGLLRAMKNITD 184
>gb|ACP51885.1| ATP synthase CF0 B subunit [Cedrus deodara]
Length = 184
Score = 75.5 bits (184), Expect = 7e-12
Identities = 45/83 (54%), Positives = 51/83 (61%)
Frame = +1
Query: 7 QIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNCLN 186
QIE EKE+LIKAAS NL+QLED KNETV E S QALR A+ TL + LN
Sbjct: 102 QIEREKEDLIKAASENLEQLEDPKNETVYSEQQRAIDQIRQQVSRQALRRAIGTLNSRLN 161
Query: 187 NELHLYIIDYNIDQLKDMKRIFD 255
ELHL ID+NI L+ M D
Sbjct: 162 TELHLRTIDHNIGLLRGMMNTND 184
>ref|YP_007475586.1| AtpF (chloroplast) [Podocarpus totara] gi|354991545|gb|AER45646.1|
atpF (chloroplast) [Podocarpus totara]
gi|449020386|gb|AGE65882.1| AtpF (chloroplast)
[Podocarpus totara]
Length = 187
Score = 74.7 bits (182), Expect = 1e-11
Identities = 42/83 (50%), Positives = 52/83 (62%)
Frame = +1
Query: 1 YLQIEEEKENLIKAASANLKQLEDSKNETVCFEXXXXXXXXXXXXSCQALRNALITLTNC 180
Y QI+ EKE+ I A S NL+QLEDSKNET+ E S QA++ AL TL +
Sbjct: 100 YSQIKREKEDFINATSTNLEQLEDSKNETIRLEQQRVIEQVQQQVSRQAVQRALRTLNSR 159
Query: 181 LNNELHLYIIDYNIDQLKDMKRI 249
LNNELHL ID++I L+ MK I
Sbjct: 160 LNNELHLRTIDHHIGLLRAMKNI 182